--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -48798.41 -48828.19
2 -48799.89 -48828.30
--------------------------------------
TOTAL -48798.90 -48828.25
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.150113 0.001782 1.077035 1.242374 1.147970 658.09 798.59 1.000
r(A<->C){all} 0.046100 0.000026 0.036612 0.056353 0.045987 771.60 820.79 1.000
r(A<->G){all} 0.277076 0.000139 0.253491 0.298801 0.277080 515.87 594.21 1.003
r(A<->T){all} 0.058201 0.000015 0.050573 0.066300 0.058148 578.33 830.88 1.000
r(C<->G){all} 0.005262 0.000006 0.000897 0.010204 0.004995 568.29 664.79 1.000
r(C<->T){all} 0.567066 0.000179 0.540944 0.593338 0.566999 462.08 557.04 1.002
r(G<->T){all} 0.046295 0.000013 0.039264 0.053050 0.046373 811.87 821.87 1.000
pi(A){all} 0.291636 0.000008 0.286184 0.297269 0.291608 516.51 641.60 1.001
pi(C){all} 0.164542 0.000005 0.160415 0.169634 0.164602 714.75 724.48 1.000
pi(G){all} 0.208691 0.000007 0.203547 0.214083 0.208700 382.97 438.27 1.000
pi(T){all} 0.335132 0.000008 0.329039 0.340444 0.335276 590.22 604.63 1.000
alpha{1,2} 0.096757 0.000016 0.089196 0.104557 0.096768 1166.05 1187.49 1.000
alpha{3} 13.948576 7.232486 9.220163 19.297170 13.694720 1212.90 1296.09 1.000
pinvar{all} 0.382004 0.000131 0.359993 0.404040 0.382241 1220.78 1231.55 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral
-- Starting log on Wed Nov 09 22:46:06 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result--
-- Starting log on Wed Nov 09 22:50:46 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result--
-- Starting log on Thu Nov 10 01:40:29 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result/gapped_alignment/codeml,A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 30 taxa and 20094 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C10
Taxon 2 -> C11
Taxon 3 -> C13
Taxon 4 -> C14
Taxon 5 -> C18
Taxon 6 -> C19
Taxon 7 -> C2
Taxon 8 -> C20
Taxon 9 -> C21
Taxon 10 -> C26
Taxon 11 -> C3
Taxon 12 -> C31
Taxon 13 -> C32
Taxon 14 -> C35
Taxon 15 -> C36
Taxon 16 -> C37
Taxon 17 -> C38
Taxon 18 -> C4
Taxon 19 -> C40
Taxon 20 -> C45
Taxon 21 -> C47
Taxon 22 -> C48
Taxon 23 -> C49
Taxon 24 -> C5
Taxon 25 -> C50
Taxon 26 -> C52
Taxon 27 -> C6
Taxon 28 -> C7
Taxon 29 -> C8
Taxon 30 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668044431
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 184274424
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 7973330377
Seed = 1963738559
Swapseed = 1668044431
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 191 unique site patterns
Division 2 has 138 unique site patterns
Division 3 has 598 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -92956.276023 -- 82.122948
Chain 2 -- -96227.329867 -- 82.122948
Chain 3 -- -95552.024308 -- 82.122948
Chain 4 -- -93135.149019 -- 82.122948
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -92452.857350 -- 82.122948
Chain 2 -- -95924.876206 -- 82.122948
Chain 3 -- -100677.164526 -- 82.122948
Chain 4 -- -101138.329884 -- 82.122948
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-92956.276] (-96227.330) (-95552.024) (-93135.149) * [-92452.857] (-95924.876) (-100677.165) (-101138.330)
1000 -- (-52717.274) (-54697.569) (-52968.955) [-52677.743] * (-52720.991) (-53237.063) (-52403.167) [-52062.523] -- 1:23:15
2000 -- (-50101.437) [-50014.220] (-50376.286) (-50499.637) * (-50266.945) (-50190.193) [-49847.393] (-49977.980) -- 1:23:10
3000 -- [-49224.063] (-49255.558) (-49530.089) (-49862.056) * (-49890.003) (-49624.197) [-49104.179] (-49226.739) -- 1:17:32
4000 -- [-48912.169] (-49108.332) (-49247.131) (-49298.286) * (-49594.397) (-49057.905) (-49011.303) [-48895.920] -- 1:14:42
5000 -- [-48843.068] (-48914.074) (-49068.705) (-49020.436) * (-49161.174) (-48911.890) (-48974.955) [-48834.019] -- 1:16:17
Average standard deviation of split frequencies: 0.162123
6000 -- [-48820.215] (-48903.941) (-48929.613) (-48941.802) * (-48941.681) (-48894.907) (-48963.474) [-48811.535] -- 1:14:33
7000 -- [-48826.231] (-48853.878) (-48895.442) (-48887.919) * (-48867.693) (-48880.185) (-48973.637) [-48808.869] -- 1:13:17
8000 -- (-48840.062) [-48815.633] (-48834.336) (-48868.193) * [-48801.854] (-48841.479) (-48956.659) (-48809.398) -- 1:14:24
9000 -- (-48821.121) [-48809.452] (-48814.448) (-48844.716) * [-48821.225] (-48828.922) (-48964.490) (-48812.878) -- 1:13:24
10000 -- (-48814.755) [-48802.251] (-48832.681) (-48867.841) * [-48812.958] (-48827.932) (-48949.088) (-48817.461) -- 1:12:36
Average standard deviation of split frequencies: 0.119693
11000 -- [-48827.941] (-48814.199) (-48820.319) (-48866.002) * (-48824.379) (-48819.765) (-48949.352) [-48813.628] -- 1:11:55
12000 -- [-48813.605] (-48818.659) (-48831.242) (-48873.547) * (-48813.959) [-48802.226] (-48954.717) (-48809.555) -- 1:12:43
13000 -- [-48811.649] (-48808.996) (-48818.965) (-48857.504) * (-48808.426) (-48814.572) (-48951.201) [-48814.008] -- 1:12:07
14000 -- (-48810.969) (-48814.594) [-48821.894] (-48878.057) * [-48814.121] (-48819.135) (-48972.871) (-48824.296) -- 1:12:46
15000 -- (-48811.840) [-48803.453] (-48817.439) (-48884.349) * [-48822.026] (-48812.651) (-48947.371) (-48814.355) -- 1:12:14
Average standard deviation of split frequencies: 0.090598
16000 -- (-48811.888) [-48812.459] (-48824.099) (-48858.706) * (-48806.683) (-48817.738) (-48931.187) [-48815.133] -- 1:11:45
17000 -- (-48811.871) (-48805.156) [-48820.116] (-48859.797) * (-48807.393) [-48808.232] (-48924.042) (-48805.372) -- 1:11:18
18000 -- (-48813.059) (-48818.805) [-48810.866] (-48879.156) * (-48822.274) [-48807.987] (-48874.740) (-48827.068) -- 1:11:49
19000 -- (-48824.688) [-48805.075] (-48802.661) (-48864.540) * (-48822.067) [-48803.075] (-48848.022) (-48827.470) -- 1:11:25
20000 -- (-48816.420) [-48811.916] (-48808.005) (-48864.723) * (-48829.623) [-48807.620] (-48822.342) (-48821.313) -- 1:11:03
Average standard deviation of split frequencies: 0.060446
21000 -- (-48808.245) (-48813.122) [-48813.378] (-48862.956) * (-48830.567) (-48810.888) [-48821.423] (-48832.003) -- 1:10:42
22000 -- (-48823.330) (-48812.945) [-48813.388] (-48869.492) * (-48822.228) (-48826.355) [-48800.318] (-48816.477) -- 1:10:23
23000 -- (-48820.364) [-48798.380] (-48815.245) (-48872.269) * (-48831.007) (-48828.314) (-48808.963) [-48807.953] -- 1:10:47
24000 -- (-48831.241) [-48805.448] (-48809.350) (-48853.597) * (-48826.373) (-48831.492) (-48818.135) [-48810.639] -- 1:10:29
25000 -- (-48811.008) [-48809.821] (-48818.189) (-48862.236) * (-48818.495) [-48809.356] (-48812.801) (-48830.162) -- 1:10:12
Average standard deviation of split frequencies: 0.041033
26000 -- [-48823.858] (-48811.867) (-48815.441) (-48856.914) * [-48803.113] (-48822.565) (-48817.132) (-48825.521) -- 1:09:55
27000 -- (-48812.437) [-48811.589] (-48823.954) (-48870.067) * (-48834.165) (-48819.027) (-48825.716) [-48800.601] -- 1:09:40
28000 -- (-48834.196) (-48817.630) [-48813.508] (-48861.724) * (-48819.769) (-48830.402) [-48809.038] (-48810.909) -- 1:09:25
29000 -- [-48817.258] (-48812.167) (-48811.267) (-48879.446) * (-48804.173) [-48808.737] (-48813.215) (-48814.648) -- 1:09:45
30000 -- (-48825.513) [-48827.714] (-48819.529) (-48879.718) * [-48816.553] (-48810.492) (-48816.254) (-48823.188) -- 1:09:31
Average standard deviation of split frequencies: 0.027103
31000 -- (-48819.534) (-48826.153) [-48814.688] (-48865.229) * (-48814.091) [-48816.278] (-48816.051) (-48818.747) -- 1:09:17
32000 -- (-48813.691) (-48826.393) [-48814.101] (-48875.288) * (-48818.212) (-48823.123) [-48805.991] (-48815.074) -- 1:09:04
33000 -- (-48822.449) (-48819.999) [-48812.269] (-48865.075) * (-48812.679) (-48821.049) (-48818.062) [-48809.553] -- 1:08:51
34000 -- (-48805.519) (-48831.068) [-48813.555] (-48855.890) * (-48825.930) [-48818.196] (-48801.921) (-48808.174) -- 1:08:39
35000 -- (-48826.737) [-48820.618] (-48805.887) (-48860.747) * (-48833.829) (-48805.390) [-48808.624] (-48822.268) -- 1:08:55
Average standard deviation of split frequencies: 0.027912
36000 -- (-48814.924) (-48813.778) [-48802.093] (-48862.444) * (-48843.376) [-48818.210] (-48809.387) (-48817.188) -- 1:08:43
37000 -- (-48812.858) [-48815.388] (-48816.780) (-48817.104) * (-48825.240) (-48825.844) [-48810.902] (-48813.063) -- 1:08:32
38000 -- (-48811.117) [-48811.042] (-48805.350) (-48829.253) * [-48811.964] (-48816.146) (-48823.276) (-48815.498) -- 1:08:21
39000 -- (-48823.911) [-48811.739] (-48817.203) (-48810.671) * (-48804.092) (-48825.162) [-48812.257] (-48833.337) -- 1:08:10
40000 -- (-48834.316) [-48807.270] (-48800.749) (-48823.279) * (-48808.643) (-48820.728) (-48820.633) [-48811.077] -- 1:08:00
Average standard deviation of split frequencies: 0.024099
41000 -- [-48808.940] (-48814.037) (-48833.848) (-48825.220) * (-48830.335) (-48817.063) [-48820.575] (-48821.875) -- 1:08:13
42000 -- [-48806.510] (-48813.436) (-48826.742) (-48829.287) * (-48821.547) (-48817.179) (-48830.272) [-48824.573] -- 1:08:02
43000 -- [-48803.590] (-48811.857) (-48813.977) (-48808.871) * (-48829.534) (-48807.104) [-48819.098] (-48828.116) -- 1:07:52
44000 -- [-48808.879] (-48819.730) (-48817.291) (-48825.740) * (-48823.553) (-48838.153) (-48815.120) [-48804.992] -- 1:07:43
45000 -- (-48814.807) [-48821.661] (-48811.106) (-48824.537) * (-48822.218) (-48825.972) [-48811.016] (-48810.547) -- 1:07:33
Average standard deviation of split frequencies: 0.021305
46000 -- [-48821.040] (-48813.644) (-48803.567) (-48823.339) * [-48807.728] (-48814.418) (-48832.913) (-48815.353) -- 1:07:24
47000 -- (-48814.725) (-48814.520) (-48809.468) [-48822.481] * (-48820.351) (-48817.188) [-48807.524] (-48821.855) -- 1:07:15
48000 -- (-48823.439) [-48824.447] (-48814.316) (-48815.623) * (-48820.665) (-48810.119) (-48822.476) [-48808.259] -- 1:07:06
49000 -- (-48823.793) [-48807.933] (-48814.997) (-48818.270) * (-48815.746) (-48826.051) (-48820.803) [-48805.061] -- 1:07:16
50000 -- [-48817.334] (-48805.342) (-48832.732) (-48814.639) * [-48813.521] (-48827.897) (-48812.122) (-48808.394) -- 1:07:08
Average standard deviation of split frequencies: 0.021057
51000 -- (-48809.610) (-48815.446) (-48819.176) [-48809.428] * (-48828.979) (-48837.961) (-48808.167) [-48808.345] -- 1:06:59
52000 -- (-48820.464) (-48815.748) (-48834.793) [-48803.433] * (-48839.966) (-48826.227) [-48825.131] (-48812.975) -- 1:06:50
53000 -- [-48812.404] (-48821.091) (-48830.057) (-48815.250) * (-48818.023) (-48820.268) (-48817.669) [-48804.987] -- 1:07:00
54000 -- (-48812.556) [-48816.672] (-48819.425) (-48830.080) * (-48819.061) (-48818.039) [-48808.781] (-48818.208) -- 1:06:51
55000 -- (-48808.355) (-48815.586) [-48829.208] (-48823.447) * (-48813.882) (-48808.291) [-48812.526] (-48812.903) -- 1:06:43
Average standard deviation of split frequencies: 0.019937
56000 -- (-48807.153) (-48836.060) (-48828.724) [-48819.249] * (-48820.341) [-48806.552] (-48815.697) (-48844.045) -- 1:06:35
57000 -- [-48805.845] (-48831.661) (-48818.644) (-48816.645) * (-48809.905) [-48808.640] (-48814.629) (-48832.957) -- 1:06:43
58000 -- [-48799.287] (-48828.180) (-48822.326) (-48814.298) * (-48829.190) [-48819.666] (-48821.021) (-48823.453) -- 1:06:35
59000 -- [-48816.087] (-48822.216) (-48813.541) (-48806.055) * (-48814.090) [-48819.025] (-48815.790) (-48831.950) -- 1:06:27
60000 -- [-48803.580] (-48821.930) (-48823.540) (-48817.886) * (-48815.129) [-48806.409] (-48822.012) (-48826.300) -- 1:06:19
Average standard deviation of split frequencies: 0.017995
61000 -- [-48815.011] (-48806.553) (-48815.417) (-48836.784) * (-48803.540) [-48808.361] (-48823.015) (-48821.827) -- 1:06:11
62000 -- [-48811.919] (-48806.128) (-48803.059) (-48838.833) * (-48809.016) (-48820.135) [-48804.906] (-48810.194) -- 1:06:03
63000 -- (-48816.068) (-48814.041) [-48813.523] (-48827.983) * (-48811.890) (-48809.443) [-48809.967] (-48809.544) -- 1:06:11
64000 -- (-48810.959) (-48820.827) [-48816.570] (-48812.947) * (-48818.024) (-48821.068) [-48812.031] (-48826.956) -- 1:06:03
65000 -- [-48808.337] (-48816.007) (-48825.784) (-48830.385) * [-48818.710] (-48814.967) (-48828.800) (-48844.882) -- 1:05:55
Average standard deviation of split frequencies: 0.016353
66000 -- (-48814.058) (-48824.003) [-48819.304] (-48818.394) * (-48821.049) [-48803.546] (-48827.709) (-48835.325) -- 1:05:48
67000 -- [-48806.120] (-48819.202) (-48813.556) (-48815.898) * [-48814.190] (-48808.774) (-48827.044) (-48827.082) -- 1:05:40
68000 -- (-48818.062) (-48824.943) [-48815.604] (-48825.119) * (-48820.386) (-48811.769) [-48824.090] (-48823.697) -- 1:05:47
69000 -- (-48828.498) (-48828.664) [-48808.199] (-48824.876) * (-48810.258) (-48811.930) [-48813.696] (-48818.465) -- 1:05:39
70000 -- [-48811.628] (-48820.601) (-48813.767) (-48817.853) * (-48823.910) [-48815.405] (-48815.443) (-48816.844) -- 1:05:32
Average standard deviation of split frequencies: 0.017555
71000 -- (-48819.437) [-48815.362] (-48821.880) (-48843.607) * [-48814.456] (-48826.107) (-48812.144) (-48815.642) -- 1:05:38
72000 -- (-48819.554) [-48809.915] (-48813.468) (-48811.759) * [-48820.598] (-48824.849) (-48812.728) (-48814.811) -- 1:05:31
73000 -- (-48841.785) [-48808.437] (-48813.378) (-48826.840) * (-48817.361) (-48826.270) [-48808.282] (-48819.448) -- 1:05:23
74000 -- [-48800.231] (-48819.767) (-48812.452) (-48823.141) * [-48807.606] (-48824.074) (-48810.389) (-48816.609) -- 1:05:16
75000 -- (-48819.699) (-48823.414) (-48818.614) [-48810.717] * (-48816.677) (-48829.743) (-48830.986) [-48817.463] -- 1:05:09
Average standard deviation of split frequencies: 0.014201
76000 -- (-48816.642) (-48815.987) [-48809.081] (-48807.658) * [-48819.951] (-48825.813) (-48815.203) (-48823.807) -- 1:05:02
77000 -- [-48810.546] (-48809.614) (-48822.803) (-48806.287) * (-48813.901) (-48827.730) [-48808.483] (-48819.683) -- 1:05:07
78000 -- (-48804.553) [-48808.843] (-48827.351) (-48813.606) * (-48817.597) [-48817.212] (-48837.105) (-48823.155) -- 1:05:00
79000 -- [-48814.054] (-48820.983) (-48815.433) (-48835.633) * [-48818.301] (-48842.602) (-48801.153) (-48819.317) -- 1:04:53
80000 -- (-48810.979) (-48817.522) (-48809.491) [-48817.940] * (-48810.058) (-48815.410) [-48810.917] (-48824.405) -- 1:04:46
Average standard deviation of split frequencies: 0.012918
81000 -- (-48827.005) (-48812.229) [-48804.600] (-48812.093) * (-48832.263) [-48815.071] (-48821.304) (-48817.316) -- 1:04:51
82000 -- (-48805.030) [-48820.523] (-48813.638) (-48820.799) * (-48820.224) [-48808.312] (-48816.879) (-48824.439) -- 1:04:44
83000 -- [-48803.283] (-48826.251) (-48832.697) (-48811.897) * [-48813.592] (-48823.706) (-48834.299) (-48830.146) -- 1:04:37
84000 -- (-48816.732) (-48826.996) (-48839.981) [-48813.557] * [-48807.016] (-48809.911) (-48838.360) (-48808.766) -- 1:04:31
85000 -- (-48818.781) (-48837.480) [-48824.352] (-48838.319) * (-48817.309) (-48808.964) (-48826.635) [-48808.549] -- 1:04:24
Average standard deviation of split frequencies: 0.014858
86000 -- (-48816.640) [-48818.204] (-48817.319) (-48814.642) * [-48807.394] (-48815.420) (-48820.035) (-48824.909) -- 1:04:17
87000 -- [-48814.466] (-48818.258) (-48830.067) (-48807.117) * (-48815.417) (-48821.889) [-48814.731] (-48809.611) -- 1:04:21
88000 -- (-48814.937) [-48818.711] (-48813.554) (-48801.742) * (-48819.951) (-48830.506) (-48819.455) [-48813.058] -- 1:04:15
89000 -- (-48823.821) (-48820.253) [-48804.037] (-48817.914) * (-48823.874) (-48815.261) [-48806.398] (-48826.278) -- 1:04:08
90000 -- (-48828.788) (-48822.893) (-48812.134) [-48808.657] * (-48830.920) (-48817.500) [-48812.525] (-48813.372) -- 1:04:12
Average standard deviation of split frequencies: 0.017103
91000 -- (-48834.377) (-48812.255) [-48807.541] (-48813.965) * (-48829.142) [-48808.800] (-48805.368) (-48807.597) -- 1:04:05
92000 -- (-48819.809) [-48812.914] (-48819.656) (-48813.803) * (-48824.288) (-48821.262) (-48810.042) [-48805.202] -- 1:03:59
93000 -- (-48836.790) (-48821.123) [-48805.575] (-48805.740) * (-48826.032) (-48812.187) (-48804.649) [-48803.983] -- 1:03:52
94000 -- [-48829.704] (-48827.766) (-48819.998) (-48820.277) * (-48829.376) [-48817.516] (-48816.365) (-48810.442) -- 1:03:46
95000 -- (-48823.850) (-48818.224) (-48808.772) [-48806.570] * (-48822.821) (-48818.758) (-48815.847) [-48807.768] -- 1:03:40
Average standard deviation of split frequencies: 0.018608
96000 -- (-48817.859) [-48812.763] (-48809.065) (-48815.694) * (-48827.932) [-48817.626] (-48808.980) (-48828.606) -- 1:03:43
97000 -- [-48814.380] (-48815.575) (-48824.121) (-48804.085) * (-48822.728) (-48818.396) [-48804.234] (-48810.192) -- 1:03:36
98000 -- (-48824.514) [-48804.185] (-48815.317) (-48816.783) * (-48818.873) [-48806.855] (-48820.923) (-48824.179) -- 1:03:30
99000 -- (-48812.758) (-48826.169) (-48824.251) [-48805.536] * (-48825.354) (-48809.047) (-48817.555) [-48812.116] -- 1:03:24
100000 -- (-48811.151) (-48835.876) [-48828.731] (-48817.244) * (-48815.379) (-48821.971) (-48821.578) [-48806.597] -- 1:03:27
Average standard deviation of split frequencies: 0.014911
101000 -- (-48817.206) (-48808.898) [-48810.537] (-48834.930) * (-48824.674) (-48822.903) (-48826.931) [-48809.835] -- 1:03:20
102000 -- (-48834.963) (-48817.034) [-48819.334] (-48830.887) * [-48813.069] (-48842.987) (-48822.043) (-48816.535) -- 1:03:14
103000 -- [-48799.472] (-48836.929) (-48815.680) (-48820.716) * (-48821.940) (-48821.693) (-48813.035) [-48811.318] -- 1:03:08
104000 -- (-48831.221) (-48815.077) (-48818.267) [-48822.362] * (-48819.480) (-48810.926) (-48808.099) [-48794.877] -- 1:03:02
105000 -- (-48819.604) [-48807.589] (-48809.240) (-48807.928) * (-48798.793) (-48820.254) (-48815.371) [-48821.223] -- 1:02:56
Average standard deviation of split frequencies: 0.013927
106000 -- (-48821.980) [-48815.617] (-48806.430) (-48822.205) * (-48808.620) (-48821.746) [-48800.957] (-48812.409) -- 1:02:49
107000 -- [-48803.473] (-48830.233) (-48813.858) (-48805.634) * (-48823.014) (-48815.000) [-48819.371] (-48812.628) -- 1:02:52
108000 -- [-48812.000] (-48827.859) (-48821.777) (-48814.538) * (-48824.994) (-48819.484) [-48814.291] (-48816.944) -- 1:02:46
109000 -- [-48817.304] (-48832.888) (-48807.416) (-48818.474) * (-48811.103) (-48815.397) (-48815.803) [-48831.680] -- 1:02:40
110000 -- (-48817.210) [-48814.804] (-48822.576) (-48805.478) * [-48809.352] (-48819.660) (-48816.646) (-48810.595) -- 1:02:34
Average standard deviation of split frequencies: 0.014012
111000 -- (-48805.269) (-48815.054) [-48809.039] (-48830.650) * (-48816.758) (-48827.125) (-48808.284) [-48815.507] -- 1:02:28
112000 -- (-48818.361) (-48814.129) [-48817.631] (-48831.934) * (-48825.174) (-48815.490) [-48817.922] (-48812.920) -- 1:02:22
113000 -- (-48817.606) (-48829.004) [-48805.360] (-48810.150) * (-48831.411) (-48822.660) [-48812.279] (-48831.135) -- 1:02:24
114000 -- [-48821.760] (-48819.970) (-48826.291) (-48818.916) * [-48824.769] (-48823.390) (-48819.310) (-48827.085) -- 1:02:18
115000 -- [-48813.057] (-48817.772) (-48822.280) (-48834.810) * (-48813.977) (-48837.863) [-48812.889] (-48826.445) -- 1:02:12
Average standard deviation of split frequencies: 0.014116
116000 -- (-48821.026) (-48836.411) [-48811.021] (-48826.793) * [-48818.443] (-48820.698) (-48825.259) (-48811.515) -- 1:02:06
117000 -- (-48822.489) [-48819.684] (-48820.892) (-48814.557) * (-48815.656) (-48824.082) (-48811.375) [-48810.014] -- 1:02:00
118000 -- [-48814.613] (-48819.202) (-48819.971) (-48827.577) * [-48810.216] (-48818.595) (-48819.947) (-48804.427) -- 1:01:54
119000 -- (-48836.068) [-48812.493] (-48825.145) (-48818.236) * (-48807.679) (-48809.316) (-48816.493) [-48815.685] -- 1:01:56
120000 -- (-48831.181) (-48811.037) (-48829.538) [-48816.079] * [-48812.362] (-48820.036) (-48816.175) (-48817.744) -- 1:01:50
Average standard deviation of split frequencies: 0.014496
121000 -- (-48811.481) [-48811.191] (-48834.668) (-48816.194) * (-48819.621) [-48807.881] (-48819.724) (-48811.494) -- 1:01:44
122000 -- (-48820.298) (-48824.684) (-48826.964) [-48811.508] * (-48808.514) (-48811.347) (-48819.569) [-48815.979] -- 1:01:39
123000 -- [-48807.609] (-48815.421) (-48813.899) (-48823.578) * (-48824.435) [-48810.633] (-48827.658) (-48800.508) -- 1:01:33
124000 -- (-48824.700) (-48818.072) (-48823.540) [-48813.059] * (-48820.070) (-48818.756) [-48805.891] (-48804.557) -- 1:01:27
125000 -- (-48814.010) (-48823.194) [-48823.994] (-48809.826) * (-48804.957) (-48805.488) [-48802.068] (-48808.255) -- 1:01:29
Average standard deviation of split frequencies: 0.015064
126000 -- (-48819.812) (-48826.860) (-48826.851) [-48808.240] * (-48799.245) (-48818.953) [-48813.741] (-48822.920) -- 1:01:23
127000 -- (-48817.978) (-48822.338) (-48816.342) [-48801.762] * (-48824.718) (-48827.218) [-48807.954] (-48805.045) -- 1:01:17
128000 -- (-48833.955) (-48828.702) [-48817.356] (-48829.237) * (-48818.364) (-48827.384) [-48819.958] (-48802.027) -- 1:01:11
129000 -- (-48816.351) (-48835.653) (-48805.987) [-48803.898] * [-48805.323] (-48810.928) (-48809.912) (-48816.493) -- 1:01:06
130000 -- (-48830.679) [-48820.071] (-48807.638) (-48814.091) * (-48808.529) [-48796.659] (-48816.849) (-48809.512) -- 1:01:00
Average standard deviation of split frequencies: 0.013386
131000 -- (-48822.109) (-48823.775) [-48810.587] (-48804.063) * (-48825.472) (-48809.568) (-48834.676) [-48804.508] -- 1:01:01
132000 -- (-48821.317) (-48834.269) (-48816.415) [-48806.271] * (-48826.739) (-48815.019) (-48826.692) [-48818.107] -- 1:00:56
133000 -- (-48813.865) (-48816.165) (-48833.329) [-48814.794] * (-48817.688) [-48804.597] (-48822.307) (-48822.424) -- 1:00:50
134000 -- (-48827.455) (-48820.132) [-48814.267] (-48813.932) * (-48814.247) [-48807.730] (-48816.342) (-48816.411) -- 1:00:44
135000 -- (-48830.419) (-48811.825) [-48806.486] (-48821.050) * (-48836.456) (-48811.294) (-48817.234) [-48814.143] -- 1:00:39
Average standard deviation of split frequencies: 0.013226
136000 -- [-48814.612] (-48822.380) (-48816.976) (-48823.987) * [-48808.145] (-48815.275) (-48816.365) (-48813.244) -- 1:00:33
137000 -- (-48810.210) (-48816.946) [-48817.465] (-48837.363) * (-48832.309) [-48818.664] (-48801.647) (-48812.101) -- 1:00:28
138000 -- [-48809.277] (-48818.619) (-48812.112) (-48818.932) * [-48802.632] (-48804.028) (-48809.335) (-48805.850) -- 1:00:22
139000 -- (-48814.118) [-48825.540] (-48814.871) (-48809.574) * (-48806.772) (-48815.930) [-48810.397] (-48812.787) -- 1:00:23
140000 -- [-48825.478] (-48835.406) (-48828.862) (-48815.072) * (-48826.991) [-48809.068] (-48809.348) (-48817.309) -- 1:00:18
Average standard deviation of split frequencies: 0.014287
141000 -- (-48836.182) (-48813.485) [-48810.410] (-48830.735) * (-48818.783) (-48813.437) [-48819.723] (-48817.485) -- 1:00:12
142000 -- (-48823.791) [-48808.320] (-48813.027) (-48825.015) * [-48803.021] (-48814.769) (-48818.381) (-48819.406) -- 1:00:07
143000 -- (-48815.813) [-48799.613] (-48830.178) (-48837.385) * [-48803.138] (-48815.087) (-48822.519) (-48810.526) -- 1:00:01
144000 -- (-48818.045) [-48817.686] (-48841.510) (-48827.792) * (-48820.874) (-48820.161) [-48803.199] (-48810.370) -- 1:00:02
145000 -- [-48811.822] (-48823.360) (-48826.851) (-48837.032) * (-48807.156) (-48815.954) (-48808.884) [-48821.568] -- 0:59:56
Average standard deviation of split frequencies: 0.014654
146000 -- (-48821.170) [-48807.629] (-48826.350) (-48822.069) * (-48802.720) (-48817.449) [-48814.506] (-48806.828) -- 0:59:51
147000 -- (-48805.053) [-48804.066] (-48822.101) (-48811.623) * [-48818.686] (-48813.319) (-48837.966) (-48810.746) -- 0:59:46
148000 -- [-48825.523] (-48815.899) (-48811.680) (-48812.159) * (-48821.664) [-48800.094] (-48812.932) (-48812.959) -- 0:59:40
149000 -- (-48824.889) (-48812.953) [-48809.071] (-48806.145) * (-48822.006) (-48836.827) [-48810.622] (-48831.484) -- 0:59:41
150000 -- (-48834.819) (-48804.652) [-48825.969] (-48821.225) * (-48824.324) (-48820.754) [-48817.029] (-48807.560) -- 0:59:35
Average standard deviation of split frequencies: 0.014039
151000 -- (-48837.534) (-48805.229) (-48819.538) [-48802.321] * [-48806.724] (-48821.046) (-48811.433) (-48821.671) -- 0:59:30
152000 -- (-48840.163) (-48819.774) (-48825.987) [-48799.114] * (-48815.833) [-48814.675] (-48817.607) (-48830.549) -- 0:59:24
153000 -- (-48832.945) (-48823.599) (-48827.480) [-48812.727] * (-48823.940) (-48824.727) (-48806.874) [-48812.177] -- 0:59:19
154000 -- (-48823.312) (-48835.220) (-48819.686) [-48811.236] * (-48812.941) [-48815.928] (-48807.874) (-48819.520) -- 0:59:14
155000 -- (-48815.837) (-48832.088) (-48828.893) [-48804.982] * [-48811.403] (-48803.184) (-48804.018) (-48827.118) -- 0:59:09
Average standard deviation of split frequencies: 0.014722
156000 -- (-48812.533) (-48825.105) [-48808.766] (-48831.269) * (-48832.521) [-48818.675] (-48796.932) (-48814.753) -- 0:59:03
157000 -- (-48828.156) [-48815.818] (-48811.993) (-48821.831) * (-48824.913) (-48814.152) (-48807.344) [-48806.687] -- 0:58:58
158000 -- (-48823.584) [-48801.598] (-48825.062) (-48823.641) * (-48834.775) (-48821.302) (-48808.543) [-48812.670] -- 0:58:58
159000 -- (-48828.703) (-48806.379) (-48812.579) [-48806.947] * (-48824.863) (-48816.603) (-48825.675) [-48803.344] -- 0:58:53
160000 -- [-48812.993] (-48820.823) (-48810.440) (-48815.032) * (-48832.111) (-48819.043) [-48818.981] (-48816.892) -- 0:58:48
Average standard deviation of split frequencies: 0.014445
161000 -- (-48822.477) [-48820.147] (-48812.276) (-48816.531) * (-48822.434) (-48813.752) (-48817.255) [-48812.768] -- 0:58:42
162000 -- (-48824.890) (-48828.504) [-48812.252] (-48814.257) * [-48824.277] (-48815.700) (-48820.682) (-48812.432) -- 0:58:37
163000 -- [-48809.678] (-48816.854) (-48802.796) (-48839.586) * (-48820.301) (-48818.061) (-48805.423) [-48805.870] -- 0:58:32
164000 -- (-48814.204) (-48828.142) [-48812.955] (-48809.534) * (-48826.453) (-48835.491) [-48814.253] (-48822.908) -- 0:58:27
165000 -- [-48810.972] (-48835.311) (-48817.899) (-48808.959) * (-48839.826) (-48846.707) (-48816.728) [-48803.663] -- 0:58:27
Average standard deviation of split frequencies: 0.014781
166000 -- [-48815.002] (-48837.712) (-48821.013) (-48806.231) * (-48818.653) (-48827.128) [-48811.292] (-48823.980) -- 0:58:21
167000 -- (-48808.886) (-48834.012) (-48813.096) [-48812.359] * [-48808.147] (-48824.346) (-48808.022) (-48830.442) -- 0:58:16
168000 -- (-48810.113) (-48825.140) (-48820.199) [-48804.121] * (-48832.591) (-48824.601) (-48832.155) [-48817.506] -- 0:58:11
169000 -- [-48805.542] (-48824.322) (-48852.172) (-48808.517) * (-48807.801) (-48814.408) (-48825.481) [-48803.125] -- 0:58:06
170000 -- (-48824.692) (-48815.270) (-48822.097) [-48811.165] * [-48805.302] (-48813.855) (-48826.800) (-48823.734) -- 0:58:01
Average standard deviation of split frequencies: 0.013457
171000 -- (-48835.044) (-48815.884) (-48826.740) [-48802.904] * (-48830.736) (-48810.415) [-48812.963] (-48813.109) -- 0:58:00
172000 -- (-48818.333) (-48818.570) [-48805.534] (-48817.270) * (-48824.708) (-48816.942) [-48806.382] (-48825.635) -- 0:57:55
173000 -- (-48821.909) (-48814.253) [-48812.883] (-48820.723) * (-48830.536) [-48806.570] (-48822.913) (-48823.381) -- 0:57:50
174000 -- (-48812.830) (-48823.614) (-48821.558) [-48813.640] * (-48814.008) (-48817.175) (-48819.751) [-48810.908] -- 0:57:45
175000 -- (-48844.677) [-48808.983] (-48809.195) (-48802.578) * [-48817.012] (-48812.145) (-48827.099) (-48829.001) -- 0:57:40
Average standard deviation of split frequencies: 0.014491
176000 -- (-48806.943) (-48817.861) (-48817.901) [-48807.000] * (-48809.493) (-48818.207) (-48827.139) [-48813.199] -- 0:57:35
177000 -- (-48815.209) (-48833.349) [-48812.637] (-48812.270) * (-48809.724) (-48821.274) (-48823.284) [-48797.956] -- 0:57:30
178000 -- [-48812.593] (-48807.511) (-48810.960) (-48825.066) * [-48810.053] (-48826.432) (-48826.948) (-48808.913) -- 0:57:29
179000 -- (-48810.289) [-48797.240] (-48812.331) (-48824.735) * (-48819.022) [-48807.605] (-48835.235) (-48818.686) -- 0:57:24
180000 -- (-48815.385) [-48799.334] (-48826.281) (-48811.866) * (-48813.984) (-48818.945) (-48824.391) [-48815.461] -- 0:57:19
Average standard deviation of split frequencies: 0.013581
181000 -- [-48806.023] (-48815.448) (-48812.257) (-48818.129) * [-48806.892] (-48819.829) (-48818.115) (-48821.055) -- 0:57:14
182000 -- (-48804.137) (-48842.676) [-48811.678] (-48823.332) * (-48814.422) (-48817.766) (-48825.044) [-48809.304] -- 0:57:09
183000 -- (-48820.265) [-48833.213] (-48820.507) (-48827.256) * [-48826.299] (-48817.633) (-48820.043) (-48838.369) -- 0:57:08
184000 -- [-48806.776] (-48814.823) (-48824.088) (-48836.265) * [-48824.578] (-48816.898) (-48824.905) (-48817.779) -- 0:57:03
185000 -- (-48808.536) (-48837.392) [-48813.423] (-48832.043) * (-48813.027) (-48814.149) (-48843.078) [-48820.762] -- 0:56:58
Average standard deviation of split frequencies: 0.011632
186000 -- (-48823.848) (-48828.023) (-48817.586) [-48813.895] * [-48805.499] (-48820.248) (-48822.702) (-48808.287) -- 0:56:53
187000 -- [-48818.559] (-48806.968) (-48833.472) (-48814.073) * (-48813.109) (-48831.978) [-48807.017] (-48803.823) -- 0:56:48
188000 -- [-48809.685] (-48804.134) (-48826.761) (-48828.196) * [-48803.236] (-48808.984) (-48804.006) (-48814.443) -- 0:56:43
189000 -- (-48822.329) (-48819.199) (-48819.042) [-48811.302] * [-48814.047] (-48819.599) (-48822.252) (-48814.058) -- 0:56:42
190000 -- (-48813.919) (-48817.279) (-48813.431) [-48814.614] * (-48827.896) (-48805.886) (-48844.090) [-48808.613] -- 0:56:37
Average standard deviation of split frequencies: 0.011061
191000 -- (-48824.949) (-48812.766) [-48817.503] (-48813.612) * (-48807.332) (-48811.198) (-48835.765) [-48813.964] -- 0:56:32
192000 -- [-48818.917] (-48815.989) (-48809.318) (-48835.228) * (-48815.950) (-48809.183) (-48818.508) [-48803.328] -- 0:56:27
193000 -- (-48813.463) [-48809.335] (-48821.976) (-48824.258) * (-48813.815) [-48800.706] (-48816.201) (-48823.036) -- 0:56:22
194000 -- (-48821.433) (-48808.476) [-48823.044] (-48809.667) * (-48811.188) (-48814.102) [-48819.752] (-48824.099) -- 0:56:17
195000 -- (-48813.384) (-48824.672) [-48805.965] (-48826.355) * (-48816.048) (-48809.130) [-48801.684] (-48817.059) -- 0:56:12
Average standard deviation of split frequencies: 0.011471
196000 -- (-48813.299) (-48826.597) (-48819.762) [-48811.070] * (-48809.574) (-48799.172) (-48816.192) [-48815.593] -- 0:56:07
197000 -- [-48812.314] (-48826.285) (-48806.444) (-48818.558) * [-48821.100] (-48818.496) (-48821.661) (-48821.535) -- 0:56:02
198000 -- (-48807.312) [-48813.912] (-48820.071) (-48818.028) * (-48827.223) (-48811.863) (-48817.898) [-48816.060] -- 0:55:57
199000 -- [-48798.579] (-48804.314) (-48816.992) (-48811.926) * (-48819.515) (-48822.333) [-48824.158] (-48806.715) -- 0:55:56
200000 -- [-48803.245] (-48815.929) (-48808.104) (-48821.048) * (-48823.447) [-48797.055] (-48826.857) (-48806.376) -- 0:55:52
Average standard deviation of split frequencies: 0.012409
201000 -- (-48811.880) [-48809.759] (-48812.783) (-48817.539) * (-48812.477) (-48798.907) (-48819.853) [-48809.173] -- 0:55:47
202000 -- [-48820.138] (-48823.137) (-48822.236) (-48813.103) * (-48814.483) (-48816.199) (-48805.719) [-48823.959] -- 0:55:42
203000 -- (-48813.911) (-48824.805) [-48812.163] (-48833.698) * (-48809.078) (-48822.062) (-48825.926) [-48816.036] -- 0:55:37
204000 -- (-48825.349) (-48810.149) (-48828.083) [-48823.845] * (-48816.396) [-48812.558] (-48822.277) (-48800.144) -- 0:55:32
205000 -- (-48826.595) (-48812.235) [-48823.197] (-48830.672) * [-48808.334] (-48822.853) (-48810.474) (-48811.669) -- 0:55:27
Average standard deviation of split frequencies: 0.011090
206000 -- (-48816.758) (-48816.606) [-48817.421] (-48812.249) * (-48813.930) (-48819.072) [-48807.128] (-48811.488) -- 0:55:26
207000 -- (-48809.744) (-48818.373) (-48830.950) [-48806.045] * (-48823.819) (-48808.357) (-48814.323) [-48790.541] -- 0:55:21
208000 -- [-48812.552] (-48820.339) (-48810.769) (-48809.549) * [-48811.649] (-48816.785) (-48810.731) (-48805.097) -- 0:55:16
209000 -- [-48803.965] (-48813.369) (-48817.344) (-48817.717) * [-48802.509] (-48816.779) (-48811.964) (-48821.853) -- 0:55:11
210000 -- (-48818.637) [-48812.660] (-48823.453) (-48824.243) * (-48814.974) (-48831.486) (-48815.218) [-48818.600] -- 0:55:06
Average standard deviation of split frequencies: 0.011303
211000 -- (-48816.977) (-48821.159) (-48827.558) [-48808.467] * [-48807.743] (-48803.696) (-48813.433) (-48816.521) -- 0:55:01
212000 -- [-48813.049] (-48817.702) (-48824.218) (-48812.915) * (-48816.043) (-48831.995) (-48818.140) [-48815.212] -- 0:54:56
213000 -- [-48818.340] (-48810.188) (-48829.340) (-48818.996) * (-48817.228) (-48823.952) [-48813.654] (-48819.350) -- 0:54:52
214000 -- (-48817.817) [-48814.311] (-48822.807) (-48827.474) * [-48821.288] (-48823.643) (-48817.107) (-48836.011) -- 0:54:50
215000 -- [-48811.249] (-48813.825) (-48813.736) (-48841.484) * (-48819.510) [-48812.419] (-48816.266) (-48843.230) -- 0:54:46
Average standard deviation of split frequencies: 0.010912
216000 -- (-48803.593) [-48809.524] (-48814.247) (-48820.217) * (-48836.028) (-48826.277) [-48810.609] (-48831.288) -- 0:54:41
217000 -- (-48806.340) (-48814.730) (-48816.505) [-48816.271] * (-48817.953) [-48809.127] (-48811.258) (-48824.802) -- 0:54:36
218000 -- (-48812.936) (-48818.388) (-48826.093) [-48807.852] * (-48825.142) [-48812.007] (-48813.825) (-48813.774) -- 0:54:31
219000 -- (-48822.543) (-48815.363) (-48839.437) [-48814.329] * (-48821.729) (-48813.318) [-48809.317] (-48812.992) -- 0:54:26
220000 -- [-48808.419] (-48823.177) (-48827.648) (-48809.937) * (-48818.193) (-48813.777) (-48817.164) [-48814.021] -- 0:54:25
Average standard deviation of split frequencies: 0.010024
221000 -- (-48820.494) (-48828.794) [-48807.024] (-48840.342) * [-48810.568] (-48817.605) (-48815.490) (-48835.345) -- 0:54:20
222000 -- (-48815.814) [-48825.448] (-48828.499) (-48827.206) * (-48801.702) [-48798.211] (-48830.885) (-48817.210) -- 0:54:15
223000 -- (-48820.704) (-48818.286) (-48819.339) [-48811.318] * (-48808.292) [-48805.913] (-48831.555) (-48824.002) -- 0:54:10
224000 -- (-48811.538) [-48819.827] (-48818.165) (-48827.896) * (-48813.778) (-48830.953) [-48819.856] (-48810.504) -- 0:54:06
225000 -- (-48839.815) (-48823.060) (-48824.619) [-48810.369] * (-48813.031) (-48809.695) [-48817.328] (-48816.904) -- 0:54:01
Average standard deviation of split frequencies: 0.009467
226000 -- (-48820.523) (-48820.745) [-48814.942] (-48812.903) * (-48809.972) (-48810.499) [-48811.483] (-48825.899) -- 0:53:56
227000 -- [-48814.491] (-48817.138) (-48810.801) (-48817.446) * (-48821.283) (-48810.989) (-48815.504) [-48809.740] -- 0:53:51
228000 -- (-48814.748) (-48821.765) (-48810.497) [-48815.002] * (-48813.732) (-48806.757) [-48807.495] (-48817.103) -- 0:53:46
229000 -- (-48824.938) [-48812.773] (-48824.129) (-48816.094) * (-48814.919) [-48822.500] (-48809.921) (-48835.471) -- 0:53:45
230000 -- (-48827.536) (-48822.973) (-48821.591) [-48802.812] * (-48827.716) (-48824.727) [-48819.203] (-48823.232) -- 0:53:40
Average standard deviation of split frequencies: 0.008803
231000 -- (-48812.262) (-48811.664) (-48798.720) [-48811.317] * (-48839.560) [-48803.585] (-48807.739) (-48815.069) -- 0:53:35
232000 -- [-48798.985] (-48828.619) (-48812.941) (-48816.879) * (-48813.974) [-48817.325] (-48816.023) (-48811.763) -- 0:53:31
233000 -- (-48817.908) (-48820.339) (-48821.847) [-48810.515] * (-48826.795) (-48814.374) (-48825.293) [-48808.851] -- 0:53:26
234000 -- (-48818.579) (-48828.678) (-48818.253) [-48822.716] * (-48809.459) [-48799.150] (-48810.236) (-48809.548) -- 0:53:21
235000 -- (-48815.605) (-48816.226) (-48817.306) [-48812.519] * (-48829.534) (-48798.400) (-48817.248) [-48803.766] -- 0:53:16
Average standard deviation of split frequencies: 0.008912
236000 -- [-48812.358] (-48817.226) (-48819.169) (-48836.074) * (-48823.866) [-48811.148] (-48820.527) (-48827.508) -- 0:53:11
237000 -- (-48818.548) [-48804.347] (-48807.905) (-48814.835) * (-48811.542) (-48827.787) (-48813.613) [-48808.178] -- 0:53:10
238000 -- [-48807.200] (-48804.202) (-48817.754) (-48830.021) * (-48816.275) [-48810.660] (-48818.698) (-48813.176) -- 0:53:05
239000 -- [-48812.093] (-48821.566) (-48829.420) (-48812.534) * (-48808.417) (-48826.455) (-48820.761) [-48801.838] -- 0:53:00
240000 -- (-48818.541) [-48816.281] (-48831.204) (-48827.529) * [-48819.350] (-48800.502) (-48816.886) (-48821.124) -- 0:52:56
Average standard deviation of split frequencies: 0.008789
241000 -- [-48813.842] (-48825.534) (-48833.372) (-48817.713) * (-48825.294) (-48809.972) [-48807.136] (-48826.170) -- 0:52:51
242000 -- (-48816.933) (-48827.370) [-48814.373] (-48816.938) * (-48813.499) (-48821.294) [-48809.439] (-48809.495) -- 0:52:49
243000 -- (-48823.643) [-48814.198] (-48819.146) (-48810.921) * [-48822.224] (-48823.639) (-48818.768) (-48810.497) -- 0:52:45
244000 -- (-48820.177) [-48813.152] (-48824.127) (-48826.598) * (-48820.586) [-48809.077] (-48823.395) (-48821.651) -- 0:52:40
245000 -- (-48825.674) (-48828.740) [-48827.472] (-48820.392) * [-48806.003] (-48802.703) (-48808.610) (-48808.374) -- 0:52:35
Average standard deviation of split frequencies: 0.008009
246000 -- (-48819.623) (-48825.772) (-48828.410) [-48815.458] * (-48805.035) (-48817.497) [-48816.874] (-48810.209) -- 0:52:30
247000 -- (-48828.562) (-48838.812) [-48817.146] (-48816.551) * (-48803.971) (-48818.412) (-48809.290) [-48809.453] -- 0:52:26
248000 -- (-48828.634) (-48825.954) (-48815.096) [-48823.874] * (-48806.387) (-48825.451) [-48810.740] (-48826.022) -- 0:52:21
249000 -- (-48812.817) (-48810.725) (-48829.200) [-48818.944] * [-48818.875] (-48816.148) (-48821.997) (-48810.090) -- 0:52:16
250000 -- (-48822.293) [-48809.025] (-48826.589) (-48822.231) * (-48815.521) (-48819.325) [-48807.478] (-48816.292) -- 0:52:12
Average standard deviation of split frequencies: 0.008535
251000 -- (-48825.624) (-48809.070) [-48813.464] (-48817.275) * (-48837.227) (-48807.266) (-48819.852) [-48819.224] -- 0:52:10
252000 -- (-48822.237) [-48800.176] (-48832.307) (-48817.187) * (-48814.266) (-48820.946) (-48820.883) [-48820.538] -- 0:52:05
253000 -- (-48842.070) (-48813.486) (-48832.556) [-48806.964] * (-48823.979) (-48822.988) [-48807.617] (-48799.780) -- 0:52:00
254000 -- [-48811.739] (-48804.858) (-48820.121) (-48812.068) * (-48823.835) (-48819.195) [-48799.191] (-48815.330) -- 0:51:56
255000 -- (-48824.464) (-48821.446) (-48817.083) [-48803.069] * (-48823.814) (-48816.971) (-48811.645) [-48816.496] -- 0:51:51
Average standard deviation of split frequencies: 0.008626
256000 -- [-48822.033] (-48820.683) (-48812.918) (-48819.471) * [-48816.657] (-48804.703) (-48830.965) (-48827.856) -- 0:51:46
257000 -- (-48824.341) (-48820.195) (-48798.985) [-48818.850] * (-48821.710) (-48814.395) [-48817.722] (-48805.428) -- 0:51:44
258000 -- (-48849.283) (-48810.908) (-48828.562) [-48807.705] * [-48807.360] (-48811.495) (-48808.431) (-48826.524) -- 0:51:40
259000 -- (-48827.857) (-48811.131) [-48816.208] (-48814.408) * (-48814.516) (-48827.158) (-48818.074) [-48815.884] -- 0:51:35
260000 -- (-48816.486) (-48821.934) [-48809.917] (-48812.526) * [-48820.403] (-48811.812) (-48815.176) (-48810.666) -- 0:51:30
Average standard deviation of split frequencies: 0.009661
261000 -- [-48812.311] (-48810.810) (-48822.623) (-48816.071) * (-48821.977) (-48807.084) [-48806.870] (-48822.328) -- 0:51:26
262000 -- [-48802.159] (-48820.571) (-48824.109) (-48815.277) * (-48810.049) [-48813.800] (-48820.213) (-48827.791) -- 0:51:24
263000 -- (-48821.513) (-48812.406) (-48842.126) [-48815.617] * (-48804.765) [-48806.958] (-48811.074) (-48819.603) -- 0:51:19
264000 -- [-48818.245] (-48812.316) (-48819.629) (-48818.150) * (-48820.293) [-48817.436] (-48812.433) (-48817.608) -- 0:51:15
265000 -- (-48808.040) [-48810.843] (-48815.852) (-48813.786) * (-48820.350) [-48804.153] (-48821.798) (-48827.051) -- 0:51:10
Average standard deviation of split frequencies: 0.009281
266000 -- [-48824.224] (-48817.944) (-48807.990) (-48822.625) * [-48811.643] (-48805.624) (-48815.054) (-48834.125) -- 0:51:05
267000 -- (-48831.910) [-48798.714] (-48812.553) (-48822.401) * (-48812.776) (-48822.519) (-48815.905) [-48812.453] -- 0:51:01
268000 -- (-48818.488) [-48815.979] (-48824.897) (-48807.758) * (-48813.164) (-48814.676) (-48811.427) [-48811.645] -- 0:50:56
269000 -- (-48805.900) (-48824.479) [-48803.074] (-48824.228) * (-48832.694) [-48811.307] (-48817.276) (-48805.792) -- 0:50:51
270000 -- [-48809.149] (-48810.503) (-48818.839) (-48817.153) * (-48834.549) (-48815.333) [-48810.216] (-48817.201) -- 0:50:47
Average standard deviation of split frequencies: 0.008846
271000 -- (-48823.857) [-48808.465] (-48810.503) (-48802.005) * (-48823.457) (-48830.499) (-48818.098) [-48817.978] -- 0:50:45
272000 -- (-48812.637) (-48807.481) (-48823.422) [-48805.069] * (-48825.180) (-48830.073) (-48820.081) [-48811.352] -- 0:50:40
273000 -- (-48820.710) (-48819.031) (-48812.612) [-48807.848] * (-48830.410) (-48818.933) (-48834.395) [-48820.916] -- 0:50:35
274000 -- (-48821.784) [-48823.890] (-48816.617) (-48820.425) * (-48823.819) (-48815.892) [-48803.495] (-48828.132) -- 0:50:31
275000 -- (-48822.453) [-48824.723] (-48822.730) (-48812.251) * (-48818.177) (-48810.823) (-48823.647) [-48819.299] -- 0:50:26
Average standard deviation of split frequencies: 0.009259
276000 -- (-48830.729) [-48811.631] (-48826.200) (-48831.393) * [-48821.079] (-48825.656) (-48821.483) (-48816.519) -- 0:50:21
277000 -- [-48832.901] (-48805.466) (-48834.768) (-48811.572) * [-48820.859] (-48824.585) (-48821.673) (-48827.064) -- 0:50:19
278000 -- [-48808.970] (-48809.969) (-48819.575) (-48837.143) * (-48821.980) [-48817.753] (-48816.587) (-48815.179) -- 0:50:15
279000 -- [-48811.361] (-48817.073) (-48813.985) (-48832.510) * (-48825.407) (-48817.789) [-48809.721] (-48816.701) -- 0:50:10
280000 -- (-48813.642) (-48803.170) (-48801.398) [-48806.547] * (-48815.874) (-48825.690) (-48835.557) [-48814.333] -- 0:50:06
Average standard deviation of split frequencies: 0.009194
281000 -- [-48816.760] (-48804.927) (-48805.945) (-48831.345) * [-48814.073] (-48821.126) (-48819.147) (-48815.630) -- 0:50:01
282000 -- (-48823.086) (-48808.646) [-48796.656] (-48820.961) * (-48828.346) (-48823.898) [-48810.241] (-48831.508) -- 0:49:56
283000 -- [-48825.547] (-48832.943) (-48818.699) (-48824.225) * [-48818.977] (-48819.097) (-48822.730) (-48824.411) -- 0:49:52
284000 -- [-48816.543] (-48816.204) (-48821.838) (-48816.990) * (-48815.835) (-48819.307) [-48799.552] (-48826.089) -- 0:49:50
285000 -- (-48823.017) (-48806.309) (-48815.230) [-48808.780] * (-48836.322) (-48815.944) [-48805.616] (-48824.647) -- 0:49:45
Average standard deviation of split frequencies: 0.009673
286000 -- (-48814.666) (-48816.754) (-48829.419) [-48833.963] * (-48838.498) (-48815.335) (-48806.793) [-48820.971] -- 0:49:40
287000 -- [-48809.337] (-48809.315) (-48810.855) (-48820.259) * (-48822.011) (-48817.110) (-48814.948) [-48829.856] -- 0:49:36
288000 -- [-48798.243] (-48828.758) (-48809.366) (-48836.964) * (-48810.748) (-48826.744) (-48813.663) [-48816.871] -- 0:49:31
289000 -- (-48817.662) [-48813.211] (-48825.482) (-48818.220) * (-48823.120) (-48831.359) (-48803.955) [-48803.146] -- 0:49:27
290000 -- [-48810.615] (-48822.452) (-48826.152) (-48828.107) * (-48820.546) (-48837.895) (-48821.951) [-48802.569] -- 0:49:22
Average standard deviation of split frequencies: 0.009048
291000 -- [-48807.491] (-48842.537) (-48823.277) (-48824.034) * (-48820.339) (-48817.560) (-48837.799) [-48806.527] -- 0:49:20
292000 -- (-48814.253) (-48813.001) [-48828.604] (-48811.006) * [-48814.803] (-48824.389) (-48816.490) (-48818.695) -- 0:49:15
293000 -- (-48829.242) [-48814.013] (-48807.160) (-48822.490) * [-48815.197] (-48815.615) (-48827.957) (-48805.539) -- 0:49:11
294000 -- (-48805.024) [-48823.880] (-48818.937) (-48837.113) * (-48817.113) [-48815.956] (-48824.154) (-48813.181) -- 0:49:06
295000 -- (-48811.661) [-48809.957] (-48833.573) (-48829.822) * (-48818.588) [-48807.657] (-48827.098) (-48821.853) -- 0:49:01
Average standard deviation of split frequencies: 0.008592
296000 -- (-48820.356) (-48817.350) (-48821.378) [-48808.337] * (-48817.133) [-48798.049] (-48823.823) (-48823.084) -- 0:48:57
297000 -- (-48803.796) (-48820.391) [-48806.388] (-48810.830) * [-48807.737] (-48820.829) (-48814.664) (-48819.925) -- 0:48:55
298000 -- [-48803.820] (-48813.233) (-48809.863) (-48815.658) * (-48819.633) [-48807.227] (-48811.337) (-48819.375) -- 0:48:50
299000 -- (-48815.249) [-48806.141] (-48813.082) (-48824.399) * (-48821.304) [-48802.766] (-48810.828) (-48813.007) -- 0:48:45
300000 -- (-48815.607) (-48808.852) (-48823.128) [-48797.474] * (-48830.657) [-48820.653] (-48816.310) (-48804.594) -- 0:48:41
Average standard deviation of split frequencies: 0.007963
301000 -- (-48820.490) (-48816.473) (-48807.209) [-48801.311] * [-48809.819] (-48818.260) (-48812.231) (-48812.924) -- 0:48:36
302000 -- (-48810.549) (-48816.373) (-48814.212) [-48812.695] * (-48822.897) [-48821.860] (-48814.545) (-48813.758) -- 0:48:32
303000 -- (-48816.819) (-48812.614) (-48805.507) [-48805.002] * (-48809.446) (-48819.684) [-48818.987] (-48819.770) -- 0:48:27
304000 -- (-48819.493) (-48808.780) [-48815.552] (-48845.056) * (-48815.808) [-48822.275] (-48828.270) (-48815.059) -- 0:48:25
305000 -- (-48823.393) [-48817.968] (-48818.529) (-48825.995) * [-48817.429] (-48836.062) (-48828.940) (-48828.918) -- 0:48:20
Average standard deviation of split frequencies: 0.008019
306000 -- [-48808.521] (-48817.802) (-48811.025) (-48825.752) * [-48822.746] (-48805.691) (-48846.956) (-48832.765) -- 0:48:16
307000 -- [-48811.985] (-48814.107) (-48835.292) (-48822.351) * [-48799.041] (-48836.185) (-48839.553) (-48813.356) -- 0:48:11
308000 -- [-48811.827] (-48822.832) (-48823.176) (-48817.547) * [-48815.142] (-48820.622) (-48819.919) (-48813.548) -- 0:48:07
309000 -- (-48814.111) (-48805.354) (-48804.598) [-48824.004] * (-48820.384) (-48821.018) (-48823.274) [-48819.100] -- 0:48:02
310000 -- (-48819.798) [-48818.452] (-48809.663) (-48823.120) * (-48811.478) (-48822.564) [-48821.679] (-48826.943) -- 0:47:57
Average standard deviation of split frequencies: 0.007820
311000 -- [-48804.800] (-48802.263) (-48817.117) (-48829.112) * [-48822.650] (-48821.405) (-48832.272) (-48821.556) -- 0:47:53
312000 -- [-48814.963] (-48806.136) (-48813.015) (-48821.332) * (-48803.015) (-48830.851) (-48826.254) [-48814.138] -- 0:47:48
313000 -- (-48826.957) [-48809.559] (-48806.371) (-48820.244) * [-48806.350] (-48816.254) (-48813.125) (-48830.628) -- 0:47:46
314000 -- (-48806.598) [-48811.665] (-48826.479) (-48809.050) * (-48808.686) [-48803.848] (-48819.322) (-48841.109) -- 0:47:41
315000 -- (-48812.249) (-48813.270) (-48825.924) [-48810.423] * (-48810.690) (-48820.773) [-48810.582] (-48840.695) -- 0:47:37
Average standard deviation of split frequencies: 0.007650
316000 -- (-48819.278) [-48822.056] (-48830.238) (-48821.031) * (-48816.290) [-48815.510] (-48825.051) (-48836.452) -- 0:47:32
317000 -- (-48819.646) (-48822.062) (-48814.409) [-48823.996] * [-48795.051] (-48815.428) (-48825.423) (-48820.046) -- 0:47:28
318000 -- (-48807.806) (-48815.672) (-48826.824) [-48818.402] * [-48804.214] (-48822.944) (-48818.988) (-48816.756) -- 0:47:23
319000 -- (-48819.774) (-48819.477) (-48821.465) [-48809.032] * (-48823.967) (-48832.184) (-48817.272) [-48808.191] -- 0:47:19
320000 -- (-48834.522) [-48821.758] (-48818.134) (-48807.572) * [-48804.882] (-48824.134) (-48825.625) (-48816.841) -- 0:47:14
Average standard deviation of split frequencies: 0.007916
321000 -- (-48809.829) (-48821.022) [-48816.373] (-48807.353) * (-48825.179) [-48814.593] (-48801.678) (-48811.492) -- 0:47:10
322000 -- [-48803.042] (-48823.188) (-48818.978) (-48824.919) * (-48823.086) (-48811.553) [-48817.575] (-48841.445) -- 0:47:05
323000 -- (-48811.708) (-48826.200) (-48836.539) [-48818.163] * (-48809.525) [-48809.156] (-48815.071) (-48826.620) -- 0:47:01
324000 -- (-48829.099) [-48808.545] (-48830.950) (-48819.185) * (-48812.723) [-48814.323] (-48811.807) (-48829.492) -- 0:46:58
325000 -- (-48824.432) (-48821.524) (-48823.181) [-48808.355] * (-48818.244) [-48819.408] (-48821.418) (-48814.515) -- 0:46:54
Average standard deviation of split frequencies: 0.007267
326000 -- (-48812.078) [-48810.386] (-48818.863) (-48824.612) * [-48809.230] (-48810.840) (-48815.801) (-48812.992) -- 0:46:49
327000 -- (-48823.896) (-48818.416) [-48823.702] (-48822.143) * [-48809.391] (-48816.809) (-48811.642) (-48821.319) -- 0:46:45
328000 -- (-48821.340) (-48817.437) [-48800.331] (-48806.449) * (-48814.137) (-48826.438) [-48819.515] (-48818.619) -- 0:46:40
329000 -- [-48820.111] (-48812.235) (-48804.370) (-48831.123) * (-48800.193) [-48812.569] (-48806.646) (-48821.288) -- 0:46:36
330000 -- (-48816.557) (-48812.549) [-48798.041] (-48822.004) * (-48813.485) [-48807.892] (-48826.919) (-48822.023) -- 0:46:31
Average standard deviation of split frequencies: 0.006982
331000 -- [-48809.596] (-48815.319) (-48823.050) (-48824.487) * (-48810.738) [-48805.582] (-48819.329) (-48831.891) -- 0:46:29
332000 -- (-48815.068) [-48820.786] (-48823.308) (-48828.673) * (-48806.973) (-48802.339) (-48815.497) [-48812.414] -- 0:46:24
333000 -- (-48819.999) (-48815.003) (-48825.729) [-48813.150] * (-48823.207) (-48834.199) (-48825.760) [-48798.994] -- 0:46:20
334000 -- (-48818.036) (-48829.920) [-48808.357] (-48825.492) * (-48825.744) [-48804.588] (-48831.300) (-48804.645) -- 0:46:15
335000 -- (-48821.035) (-48813.217) (-48811.568) [-48807.243] * (-48830.567) [-48808.999] (-48831.000) (-48813.829) -- 0:46:13
Average standard deviation of split frequencies: 0.007089
336000 -- (-48817.399) (-48829.801) (-48816.415) [-48813.050] * (-48819.859) (-48818.577) (-48827.933) [-48827.411] -- 0:46:08
337000 -- [-48801.665] (-48815.264) (-48822.445) (-48820.922) * (-48815.670) [-48814.402] (-48811.984) (-48832.092) -- 0:46:04
338000 -- (-48824.496) [-48819.239] (-48824.139) (-48809.806) * (-48813.177) [-48820.991] (-48810.331) (-48823.264) -- 0:45:59
339000 -- (-48815.808) (-48816.979) [-48809.407] (-48828.000) * (-48817.218) [-48817.973] (-48817.809) (-48822.989) -- 0:45:55
340000 -- (-48824.602) (-48832.736) (-48819.630) [-48824.978] * [-48819.899] (-48837.147) (-48824.551) (-48816.253) -- 0:45:50
Average standard deviation of split frequencies: 0.007283
341000 -- (-48810.326) (-48814.722) (-48815.153) [-48819.610] * (-48818.738) (-48817.105) (-48824.845) [-48814.331] -- 0:45:48
342000 -- (-48838.671) (-48802.646) [-48807.256] (-48822.637) * (-48808.975) [-48811.100] (-48826.701) (-48810.511) -- 0:45:43
343000 -- (-48824.518) (-48816.005) (-48816.317) [-48813.894] * (-48821.646) (-48818.098) (-48827.261) [-48807.280] -- 0:45:39
344000 -- (-48813.582) [-48813.135] (-48828.157) (-48824.221) * (-48812.766) (-48813.503) (-48813.343) [-48800.047] -- 0:45:34
345000 -- (-48830.798) [-48813.161] (-48825.438) (-48830.682) * (-48813.455) (-48825.845) [-48811.531] (-48820.461) -- 0:45:30
Average standard deviation of split frequencies: 0.006638
346000 -- (-48831.961) (-48809.593) [-48804.003] (-48815.173) * [-48808.188] (-48814.885) (-48823.633) (-48801.201) -- 0:45:25
347000 -- (-48830.631) (-48825.871) (-48844.033) [-48815.515] * (-48808.420) (-48819.307) [-48826.199] (-48814.264) -- 0:45:23
348000 -- (-48812.516) (-48810.259) (-48850.835) [-48796.440] * [-48817.314] (-48832.366) (-48808.989) (-48813.971) -- 0:45:18
349000 -- (-48817.463) (-48822.741) (-48832.817) [-48801.739] * [-48825.021] (-48825.453) (-48819.302) (-48822.872) -- 0:45:14
350000 -- (-48820.234) [-48808.067] (-48815.587) (-48812.432) * (-48815.636) (-48817.612) (-48829.489) [-48806.508] -- 0:45:09
Average standard deviation of split frequencies: 0.006618
351000 -- [-48823.279] (-48813.676) (-48810.926) (-48820.893) * [-48823.023] (-48825.022) (-48810.230) (-48811.352) -- 0:45:06
352000 -- (-48827.926) (-48813.011) (-48809.506) [-48810.863] * (-48812.407) (-48819.125) (-48820.657) [-48801.320] -- 0:45:02
353000 -- (-48821.365) (-48811.261) [-48805.898] (-48822.030) * [-48820.453] (-48822.090) (-48808.099) (-48827.461) -- 0:44:57
354000 -- (-48827.490) [-48810.825] (-48811.652) (-48823.906) * [-48816.658] (-48820.676) (-48810.857) (-48808.439) -- 0:44:53
355000 -- (-48827.098) (-48811.926) [-48807.802] (-48823.659) * (-48827.412) [-48819.714] (-48822.503) (-48816.964) -- 0:44:49
Average standard deviation of split frequencies: 0.005874
356000 -- (-48850.908) (-48809.783) [-48819.803] (-48833.925) * (-48819.016) (-48820.076) (-48817.945) [-48805.674] -- 0:44:46
357000 -- (-48808.519) (-48808.280) (-48822.066) [-48813.477] * (-48812.157) (-48827.850) (-48813.144) [-48808.840] -- 0:44:41
358000 -- (-48818.072) (-48825.861) (-48815.854) [-48805.269] * [-48807.294] (-48810.161) (-48838.038) (-48826.866) -- 0:44:37
359000 -- (-48818.913) (-48828.106) (-48809.273) [-48806.952] * [-48810.840] (-48815.085) (-48821.803) (-48809.277) -- 0:44:32
360000 -- (-48803.687) (-48807.008) [-48813.628] (-48815.804) * (-48817.342) (-48818.255) [-48804.945] (-48804.313) -- 0:44:28
Average standard deviation of split frequencies: 0.006032
361000 -- [-48802.983] (-48816.957) (-48829.183) (-48822.284) * [-48806.243] (-48814.811) (-48816.324) (-48826.890) -- 0:44:23
362000 -- (-48808.247) (-48811.292) (-48826.038) [-48806.612] * (-48816.198) [-48817.944] (-48821.512) (-48824.481) -- 0:44:21
363000 -- (-48811.268) (-48816.812) (-48829.034) [-48820.340] * (-48802.448) (-48819.522) (-48824.367) [-48807.713] -- 0:44:16
364000 -- (-48809.607) [-48821.357] (-48819.305) (-48819.237) * (-48805.756) [-48818.896] (-48814.421) (-48812.860) -- 0:44:12
365000 -- (-48822.203) (-48817.512) [-48817.434] (-48807.436) * (-48821.887) (-48808.751) [-48807.402] (-48808.300) -- 0:44:07
Average standard deviation of split frequencies: 0.005416
366000 -- (-48811.196) [-48816.094] (-48805.198) (-48811.567) * (-48806.135) (-48820.905) [-48814.155] (-48816.757) -- 0:44:03
367000 -- (-48828.030) [-48805.067] (-48807.224) (-48814.552) * (-48813.457) [-48804.802] (-48814.034) (-48810.164) -- 0:44:00
368000 -- (-48816.205) (-48823.812) [-48809.957] (-48817.086) * [-48808.965] (-48811.741) (-48816.606) (-48825.825) -- 0:43:56
369000 -- (-48815.490) (-48825.309) [-48810.490] (-48824.831) * [-48812.376] (-48814.212) (-48814.966) (-48841.194) -- 0:43:51
370000 -- (-48824.396) [-48813.067] (-48810.129) (-48831.112) * (-48823.858) (-48810.257) [-48807.158] (-48832.552) -- 0:43:47
Average standard deviation of split frequencies: 0.005185
371000 -- (-48817.139) (-48813.673) [-48802.212] (-48811.098) * (-48809.323) (-48812.110) [-48818.625] (-48827.299) -- 0:43:42
372000 -- [-48816.362] (-48827.640) (-48823.913) (-48814.094) * (-48832.767) (-48813.690) [-48814.351] (-48809.994) -- 0:43:40
373000 -- [-48826.142] (-48837.399) (-48819.439) (-48825.375) * (-48846.425) (-48817.165) (-48811.830) [-48802.705] -- 0:43:35
374000 -- [-48807.882] (-48828.513) (-48818.290) (-48816.508) * [-48811.007] (-48818.459) (-48808.716) (-48810.218) -- 0:43:31
375000 -- [-48808.771] (-48820.669) (-48832.105) (-48830.830) * (-48811.325) (-48835.819) [-48806.289] (-48815.001) -- 0:43:26
Average standard deviation of split frequencies: 0.005208
376000 -- [-48801.785] (-48822.303) (-48811.477) (-48836.905) * [-48806.071] (-48807.186) (-48814.910) (-48809.933) -- 0:43:22
377000 -- [-48800.779] (-48837.097) (-48830.038) (-48824.050) * [-48804.497] (-48816.610) (-48832.213) (-48841.152) -- 0:43:17
378000 -- [-48801.383] (-48828.632) (-48832.279) (-48834.697) * (-48802.171) (-48823.836) [-48813.311] (-48826.443) -- 0:43:14
379000 -- (-48825.334) [-48808.106] (-48823.624) (-48842.898) * [-48815.916] (-48830.670) (-48811.741) (-48820.643) -- 0:43:10
380000 -- [-48816.572] (-48811.049) (-48818.270) (-48827.853) * (-48817.420) (-48815.692) [-48813.143] (-48822.820) -- 0:43:06
Average standard deviation of split frequencies: 0.005144
381000 -- [-48819.181] (-48823.249) (-48835.087) (-48821.631) * (-48823.771) (-48816.137) (-48796.554) [-48815.117] -- 0:43:01
382000 -- [-48807.322] (-48806.744) (-48828.408) (-48828.900) * [-48804.034] (-48815.247) (-48818.726) (-48812.272) -- 0:42:57
383000 -- [-48809.410] (-48804.686) (-48838.241) (-48818.436) * [-48806.269] (-48813.754) (-48810.357) (-48814.490) -- 0:42:54
384000 -- [-48807.618] (-48811.786) (-48828.382) (-48822.817) * (-48817.307) (-48813.807) (-48804.104) [-48807.576] -- 0:42:49
385000 -- (-48816.154) (-48801.970) (-48834.960) [-48805.132] * (-48803.451) [-48804.548] (-48830.982) (-48817.495) -- 0:42:45
Average standard deviation of split frequencies: 0.004822
386000 -- (-48828.967) (-48821.394) (-48822.935) [-48818.694] * (-48804.043) (-48809.211) (-48817.091) [-48807.368] -- 0:42:40
387000 -- [-48803.139] (-48813.945) (-48818.226) (-48835.100) * (-48811.429) [-48812.654] (-48805.745) (-48816.335) -- 0:42:36
388000 -- [-48806.414] (-48806.593) (-48815.151) (-48824.021) * (-48818.539) (-48825.508) [-48816.252] (-48828.670) -- 0:42:32
389000 -- [-48807.417] (-48816.489) (-48814.921) (-48819.327) * (-48822.836) (-48813.424) [-48806.574] (-48811.943) -- 0:42:29
390000 -- (-48807.639) (-48813.225) [-48813.099] (-48818.570) * [-48824.889] (-48823.278) (-48822.180) (-48818.017) -- 0:42:24
Average standard deviation of split frequencies: 0.004455
391000 -- (-48813.576) [-48807.330] (-48813.239) (-48814.442) * (-48824.680) (-48819.050) [-48822.259] (-48826.075) -- 0:42:20
392000 -- [-48809.644] (-48823.760) (-48823.110) (-48810.727) * [-48809.902] (-48818.902) (-48806.196) (-48814.506) -- 0:42:15
393000 -- (-48829.385) (-48815.964) (-48819.296) [-48808.227] * (-48814.523) [-48817.288] (-48818.404) (-48818.533) -- 0:42:13
394000 -- (-48815.043) (-48816.326) (-48815.206) [-48810.971] * (-48815.601) (-48824.932) (-48810.859) [-48818.888] -- 0:42:08
395000 -- (-48821.732) (-48818.940) (-48826.564) [-48817.509] * [-48809.452] (-48803.874) (-48814.711) (-48815.068) -- 0:42:04
Average standard deviation of split frequencies: 0.004914
396000 -- (-48810.926) (-48814.368) [-48819.211] (-48826.591) * (-48809.336) (-48810.351) [-48816.337] (-48808.469) -- 0:41:59
397000 -- (-48820.701) (-48824.411) [-48812.306] (-48832.732) * [-48797.233] (-48821.868) (-48838.129) (-48828.296) -- 0:41:55
398000 -- (-48822.800) (-48819.617) (-48815.173) [-48807.618] * [-48808.740] (-48802.663) (-48825.495) (-48815.986) -- 0:41:50
399000 -- [-48821.999] (-48808.419) (-48843.671) (-48810.553) * (-48808.624) [-48823.561] (-48823.493) (-48808.118) -- 0:41:46
400000 -- (-48814.807) (-48820.593) (-48828.577) [-48810.702] * [-48813.924] (-48824.109) (-48823.680) (-48806.369) -- 0:41:42
Average standard deviation of split frequencies: 0.005551
401000 -- (-48815.458) (-48832.611) (-48822.119) [-48815.644] * [-48811.142] (-48806.529) (-48805.716) (-48813.748) -- 0:41:39
402000 -- (-48840.458) (-48835.746) (-48805.837) [-48807.908] * (-48815.924) (-48809.439) (-48810.747) [-48821.718] -- 0:41:34
403000 -- (-48816.170) [-48813.171] (-48811.378) (-48808.241) * (-48816.745) (-48825.880) (-48823.392) [-48811.367] -- 0:41:30
404000 -- (-48828.995) [-48804.549] (-48822.505) (-48829.502) * (-48815.046) [-48817.478] (-48813.827) (-48823.221) -- 0:41:25
405000 -- (-48821.310) (-48830.906) (-48815.765) [-48813.833] * (-48808.243) (-48816.237) [-48812.313] (-48824.947) -- 0:41:21
Average standard deviation of split frequencies: 0.005240
406000 -- [-48807.502] (-48817.457) (-48813.168) (-48818.699) * (-48809.873) (-48808.456) [-48816.364] (-48821.090) -- 0:41:16
407000 -- (-48831.601) (-48814.012) [-48813.255] (-48813.013) * [-48810.901] (-48825.335) (-48814.730) (-48804.494) -- 0:41:13
408000 -- (-48823.204) (-48832.140) [-48818.532] (-48840.265) * (-48814.475) (-48829.908) (-48819.202) [-48821.110] -- 0:41:09
409000 -- [-48802.207] (-48837.759) (-48834.232) (-48819.305) * (-48833.657) (-48815.892) [-48802.087] (-48813.766) -- 0:41:05
410000 -- [-48804.998] (-48816.646) (-48829.465) (-48822.376) * (-48823.761) (-48818.490) [-48810.136] (-48802.726) -- 0:41:00
Average standard deviation of split frequencies: 0.005286
411000 -- [-48809.670] (-48813.114) (-48830.636) (-48837.212) * (-48817.628) (-48811.339) (-48804.505) [-48805.569] -- 0:40:56
412000 -- (-48818.306) (-48830.742) (-48838.325) [-48803.001] * (-48829.801) (-48810.211) [-48797.543] (-48820.337) -- 0:40:51
413000 -- (-48821.935) (-48828.349) [-48805.202] (-48800.319) * (-48814.572) [-48816.893] (-48817.218) (-48808.638) -- 0:40:47
414000 -- (-48822.075) (-48813.319) [-48811.390] (-48820.417) * (-48817.135) (-48811.490) [-48825.929] (-48826.804) -- 0:40:44
415000 -- (-48830.730) [-48816.234] (-48800.751) (-48826.581) * (-48825.072) (-48813.812) [-48818.311] (-48814.236) -- 0:40:40
Average standard deviation of split frequencies: 0.004920
416000 -- [-48829.034] (-48825.669) (-48807.119) (-48808.106) * (-48828.771) [-48814.163] (-48818.261) (-48822.037) -- 0:40:35
417000 -- (-48822.825) [-48809.977] (-48807.161) (-48821.145) * (-48825.081) [-48808.345] (-48820.006) (-48828.846) -- 0:40:31
418000 -- (-48820.432) (-48834.954) [-48805.942] (-48810.963) * (-48839.476) (-48831.677) (-48820.076) [-48812.178] -- 0:40:26
419000 -- (-48816.591) (-48828.604) (-48814.662) [-48822.651] * (-48839.345) (-48809.200) (-48820.050) [-48803.059] -- 0:40:22
420000 -- [-48810.796] (-48826.171) (-48825.157) (-48827.907) * (-48831.406) (-48817.406) [-48817.639] (-48807.350) -- 0:40:19
Average standard deviation of split frequencies: 0.004836
421000 -- (-48816.548) (-48806.767) (-48811.436) [-48804.770] * (-48823.091) (-48817.569) (-48824.255) [-48812.279] -- 0:40:15
422000 -- (-48812.919) (-48827.767) (-48823.811) [-48804.546] * (-48824.135) [-48805.865] (-48823.631) (-48795.811) -- 0:40:10
423000 -- (-48826.359) (-48838.874) (-48805.640) [-48810.329] * [-48801.951] (-48807.744) (-48839.401) (-48819.277) -- 0:40:06
424000 -- (-48801.703) (-48825.101) [-48806.006] (-48810.345) * [-48802.766] (-48820.130) (-48824.608) (-48809.984) -- 0:40:03
425000 -- (-48811.290) (-48814.295) [-48799.944] (-48823.369) * (-48806.791) [-48815.951] (-48822.831) (-48816.913) -- 0:39:58
Average standard deviation of split frequencies: 0.005475
426000 -- (-48820.739) (-48812.419) (-48820.170) [-48808.178] * (-48806.869) (-48821.089) [-48803.251] (-48816.498) -- 0:39:54
427000 -- (-48817.721) (-48822.568) (-48801.767) [-48807.241] * (-48799.800) (-48832.324) (-48807.911) [-48811.509] -- 0:39:49
428000 -- [-48809.596] (-48845.217) (-48813.520) (-48817.131) * (-48821.775) [-48815.967] (-48815.303) (-48816.517) -- 0:39:46
429000 -- (-48822.435) (-48822.662) [-48810.738] (-48820.419) * [-48808.316] (-48804.330) (-48807.251) (-48823.086) -- 0:39:42
430000 -- (-48806.945) (-48812.482) [-48811.573] (-48821.959) * [-48817.689] (-48816.138) (-48828.557) (-48821.313) -- 0:39:38
Average standard deviation of split frequencies: 0.005934
431000 -- [-48820.162] (-48816.489) (-48823.010) (-48819.292) * (-48821.596) (-48828.451) (-48820.048) [-48809.762] -- 0:39:33
432000 -- [-48814.921] (-48815.637) (-48815.025) (-48814.907) * [-48810.368] (-48815.993) (-48814.705) (-48822.377) -- 0:39:29
433000 -- (-48814.429) (-48824.058) (-48846.056) [-48823.399] * (-48809.585) (-48809.666) (-48833.701) [-48801.222] -- 0:39:26
434000 -- (-48808.882) (-48824.557) (-48819.085) [-48822.575] * (-48823.384) (-48822.952) [-48815.167] (-48810.160) -- 0:39:21
435000 -- (-48819.387) (-48812.745) [-48809.206] (-48828.001) * (-48804.802) (-48823.649) [-48812.005] (-48810.668) -- 0:39:17
Average standard deviation of split frequencies: 0.005747
436000 -- (-48826.986) (-48819.195) [-48815.519] (-48823.840) * (-48817.675) (-48812.904) (-48806.696) [-48807.910] -- 0:39:13
437000 -- (-48814.327) [-48814.443] (-48831.414) (-48826.052) * (-48824.516) (-48818.507) [-48806.191] (-48822.453) -- 0:39:08
438000 -- (-48825.175) [-48801.823] (-48835.883) (-48830.483) * (-48819.440) [-48805.963] (-48802.373) (-48838.081) -- 0:39:05
439000 -- (-48829.346) [-48810.552] (-48821.732) (-48810.276) * (-48813.723) [-48813.760] (-48814.858) (-48835.496) -- 0:39:01
440000 -- (-48805.917) (-48813.696) (-48818.711) [-48809.334] * (-48824.434) [-48817.671] (-48818.324) (-48811.650) -- 0:38:56
Average standard deviation of split frequencies: 0.006587
441000 -- [-48818.134] (-48807.019) (-48835.977) (-48828.044) * (-48821.141) [-48824.608] (-48819.934) (-48813.891) -- 0:38:53
442000 -- (-48808.153) [-48806.303] (-48833.387) (-48818.989) * (-48826.504) (-48824.283) (-48810.910) [-48807.282] -- 0:38:49
443000 -- [-48816.835] (-48814.105) (-48809.913) (-48813.020) * [-48824.992] (-48824.244) (-48818.779) (-48822.119) -- 0:38:44
444000 -- [-48829.175] (-48805.623) (-48821.464) (-48811.244) * [-48802.641] (-48806.262) (-48817.414) (-48824.366) -- 0:38:40
445000 -- (-48807.740) (-48801.841) [-48806.363] (-48800.438) * [-48806.666] (-48809.428) (-48816.008) (-48812.127) -- 0:38:36
Average standard deviation of split frequencies: 0.007204
446000 -- [-48807.071] (-48807.977) (-48842.301) (-48824.318) * [-48809.412] (-48808.960) (-48824.249) (-48818.355) -- 0:38:32
447000 -- [-48815.065] (-48817.285) (-48827.375) (-48815.199) * [-48818.857] (-48817.854) (-48821.231) (-48832.000) -- 0:38:28
448000 -- (-48824.769) [-48810.551] (-48823.352) (-48808.270) * (-48830.652) (-48801.687) [-48816.446] (-48812.334) -- 0:38:24
449000 -- (-48844.608) [-48808.091] (-48830.789) (-48817.345) * (-48831.591) [-48800.981] (-48809.446) (-48821.344) -- 0:38:19
450000 -- (-48824.223) (-48811.878) (-48822.077) [-48806.008] * (-48823.462) (-48810.310) [-48809.909] (-48827.051) -- 0:38:15
Average standard deviation of split frequencies: 0.006744
451000 -- (-48819.871) (-48816.725) (-48830.078) [-48801.087] * (-48828.911) (-48823.498) [-48814.488] (-48830.026) -- 0:38:10
452000 -- (-48811.586) (-48821.913) (-48813.382) [-48814.024] * [-48807.264] (-48821.279) (-48814.472) (-48817.881) -- 0:38:06
453000 -- (-48826.539) (-48814.537) (-48833.225) [-48805.470] * (-48808.812) (-48805.986) [-48811.228] (-48827.889) -- 0:38:02
454000 -- (-48812.407) (-48826.653) (-48837.838) [-48813.953] * [-48804.103] (-48820.268) (-48816.777) (-48812.474) -- 0:37:59
455000 -- [-48803.247] (-48813.236) (-48835.047) (-48818.958) * [-48809.228] (-48810.220) (-48839.798) (-48818.740) -- 0:37:54
Average standard deviation of split frequencies: 0.006638
456000 -- [-48799.576] (-48814.916) (-48845.607) (-48822.827) * [-48811.606] (-48817.010) (-48825.309) (-48812.139) -- 0:37:50
457000 -- [-48795.424] (-48829.801) (-48827.935) (-48819.526) * (-48820.447) (-48822.818) (-48824.014) [-48806.223] -- 0:37:45
458000 -- [-48815.833] (-48834.315) (-48819.661) (-48808.702) * [-48818.557] (-48821.577) (-48810.345) (-48816.704) -- 0:37:41
459000 -- (-48809.443) (-48842.410) (-48818.437) [-48821.305] * (-48821.769) [-48816.481] (-48818.230) (-48834.678) -- 0:37:37
460000 -- [-48815.927] (-48839.896) (-48824.654) (-48814.003) * (-48821.390) (-48820.554) [-48823.561] (-48811.804) -- 0:37:32
Average standard deviation of split frequencies: 0.006705
461000 -- [-48818.115] (-48823.700) (-48825.159) (-48827.760) * (-48820.527) [-48811.860] (-48818.182) (-48815.059) -- 0:37:29
462000 -- (-48808.039) (-48813.385) [-48828.930] (-48816.935) * (-48823.181) (-48821.899) [-48812.613] (-48816.246) -- 0:37:25
463000 -- (-48813.292) (-48827.618) (-48826.054) [-48810.606] * [-48818.963] (-48830.359) (-48815.846) (-48819.767) -- 0:37:20
464000 -- [-48798.972] (-48827.165) (-48825.169) (-48808.239) * [-48823.624] (-48826.720) (-48829.151) (-48806.820) -- 0:37:16
465000 -- [-48809.110] (-48807.501) (-48818.893) (-48832.691) * [-48812.384] (-48824.527) (-48840.775) (-48816.868) -- 0:37:13
Average standard deviation of split frequencies: 0.006762
466000 -- (-48805.211) (-48823.126) (-48832.248) [-48828.726] * [-48801.142] (-48813.960) (-48822.596) (-48825.381) -- 0:37:08
467000 -- (-48807.335) (-48805.360) (-48821.366) [-48810.719] * [-48808.744] (-48823.637) (-48818.289) (-48822.955) -- 0:37:04
468000 -- (-48818.126) (-48807.510) [-48804.455] (-48806.521) * (-48811.457) (-48833.178) (-48829.242) [-48812.951] -- 0:37:00
469000 -- (-48811.204) (-48822.691) (-48832.988) [-48805.171] * (-48808.703) (-48819.995) [-48805.063] (-48829.363) -- 0:36:55
470000 -- (-48802.334) (-48824.264) (-48814.344) [-48816.295] * (-48815.412) (-48811.069) (-48821.987) [-48809.338] -- 0:36:52
Average standard deviation of split frequencies: 0.006906
471000 -- (-48810.479) [-48819.726] (-48840.537) (-48802.433) * [-48817.620] (-48812.227) (-48809.973) (-48813.838) -- 0:36:48
472000 -- (-48826.743) (-48817.267) (-48808.673) [-48806.272] * (-48837.857) (-48813.888) (-48812.655) [-48808.134] -- 0:36:43
473000 -- (-48831.156) [-48817.354] (-48820.609) (-48822.363) * (-48835.909) [-48810.881] (-48809.891) (-48835.823) -- 0:36:39
474000 -- (-48816.057) [-48811.211] (-48820.936) (-48828.606) * (-48839.069) [-48822.912] (-48809.020) (-48834.314) -- 0:36:34
475000 -- [-48820.878] (-48809.390) (-48823.463) (-48817.816) * (-48808.907) [-48819.349] (-48818.779) (-48839.608) -- 0:36:30
Average standard deviation of split frequencies: 0.007245
476000 -- (-48819.515) (-48821.677) (-48803.453) [-48817.598] * (-48813.084) (-48813.530) (-48809.771) [-48822.417] -- 0:36:26
477000 -- (-48817.934) [-48808.852] (-48840.328) (-48817.809) * [-48824.616] (-48806.761) (-48824.370) (-48828.076) -- 0:36:23
478000 -- (-48820.343) [-48801.295] (-48818.963) (-48824.602) * (-48807.503) (-48828.227) [-48810.118] (-48817.956) -- 0:36:18
479000 -- (-48835.662) [-48807.818] (-48828.176) (-48818.473) * (-48813.602) (-48824.241) (-48815.768) [-48807.198] -- 0:36:14
480000 -- (-48826.728) (-48810.988) (-48809.805) [-48803.255] * [-48821.353] (-48831.757) (-48814.494) (-48811.024) -- 0:36:11
Average standard deviation of split frequencies: 0.006762
481000 -- (-48824.950) (-48822.523) [-48803.108] (-48796.137) * (-48819.581) (-48822.127) [-48821.056] (-48820.686) -- 0:36:06
482000 -- (-48829.865) (-48815.779) [-48812.058] (-48810.055) * (-48820.483) (-48824.696) (-48830.358) [-48813.138] -- 0:36:02
483000 -- (-48840.504) (-48821.290) (-48819.927) [-48809.459] * (-48827.453) (-48824.442) (-48808.354) [-48804.458] -- 0:35:57
484000 -- (-48831.730) (-48815.677) (-48829.235) [-48801.854] * (-48827.963) (-48835.171) (-48813.246) [-48817.617] -- 0:35:54
485000 -- (-48821.239) [-48824.056] (-48812.973) (-48828.524) * (-48818.240) (-48825.142) (-48831.164) [-48809.754] -- 0:35:50
Average standard deviation of split frequencies: 0.006407
486000 -- (-48844.524) (-48815.211) [-48804.696] (-48823.267) * (-48820.415) (-48820.107) (-48830.518) [-48802.068] -- 0:35:45
487000 -- (-48825.932) [-48801.291] (-48817.077) (-48817.720) * (-48827.883) (-48817.312) (-48811.416) [-48805.338] -- 0:35:41
488000 -- (-48836.096) [-48814.183] (-48835.158) (-48818.839) * (-48831.532) (-48829.539) (-48826.021) [-48808.587] -- 0:35:37
489000 -- (-48821.149) (-48825.321) [-48819.339] (-48818.069) * (-48810.096) (-48821.248) [-48804.113] (-48822.756) -- 0:35:33
490000 -- [-48824.759] (-48822.031) (-48811.704) (-48807.106) * (-48826.831) (-48822.447) [-48812.724] (-48808.895) -- 0:35:29
Average standard deviation of split frequencies: 0.006321
491000 -- (-48809.891) (-48809.187) (-48807.389) [-48803.212] * (-48812.910) (-48816.847) [-48807.549] (-48834.966) -- 0:35:25
492000 -- (-48820.866) (-48820.219) [-48805.220] (-48818.597) * (-48819.641) (-48814.318) [-48805.277] (-48814.668) -- 0:35:20
493000 -- (-48831.029) (-48817.105) (-48820.013) [-48813.526] * (-48830.171) [-48809.001] (-48824.018) (-48811.709) -- 0:35:16
494000 -- [-48817.663] (-48819.391) (-48818.166) (-48817.728) * (-48813.846) (-48818.188) [-48811.432] (-48831.829) -- 0:35:12
495000 -- [-48810.997] (-48807.965) (-48817.146) (-48808.228) * (-48813.134) (-48815.735) (-48827.946) [-48802.956] -- 0:35:07
Average standard deviation of split frequencies: 0.006103
496000 -- (-48822.390) [-48802.236] (-48810.911) (-48817.321) * (-48805.670) (-48809.005) (-48818.375) [-48793.799] -- 0:35:03
497000 -- (-48819.561) (-48816.033) (-48816.072) [-48804.229] * [-48807.227] (-48827.016) (-48822.055) (-48799.568) -- 0:34:59
498000 -- (-48826.089) (-48827.215) (-48810.744) [-48816.297] * (-48823.083) (-48831.300) (-48801.290) [-48799.253] -- 0:34:54
499000 -- (-48816.217) (-48816.515) (-48809.906) [-48815.457] * (-48823.354) [-48811.344] (-48815.973) (-48822.004) -- 0:34:51
500000 -- (-48825.943) (-48822.853) (-48819.860) [-48813.097] * [-48813.045] (-48809.874) (-48827.976) (-48822.492) -- 0:34:47
Average standard deviation of split frequencies: 0.006219
501000 -- (-48808.171) [-48811.421] (-48820.347) (-48808.710) * [-48803.478] (-48816.240) (-48823.801) (-48822.297) -- 0:34:42
502000 -- (-48812.835) (-48815.396) (-48822.441) [-48819.412] * (-48829.547) [-48810.273] (-48823.189) (-48832.729) -- 0:34:38
503000 -- (-48830.173) (-48852.255) (-48810.331) [-48821.925] * (-48810.703) [-48808.404] (-48820.301) (-48841.704) -- 0:34:33
504000 -- (-48831.620) (-48818.849) (-48819.445) [-48818.686] * (-48812.431) (-48816.926) [-48810.391] (-48822.836) -- 0:34:29
505000 -- (-48827.905) (-48828.595) [-48806.512] (-48835.991) * (-48815.714) [-48816.530] (-48807.511) (-48820.156) -- 0:34:26
Average standard deviation of split frequencies: 0.006252
506000 -- (-48816.374) [-48808.550] (-48831.302) (-48827.673) * (-48826.208) (-48815.587) (-48805.938) [-48810.753] -- 0:34:21
507000 -- (-48825.663) (-48811.299) (-48807.541) [-48812.708] * (-48822.951) [-48806.524] (-48828.854) (-48815.190) -- 0:34:17
508000 -- (-48832.268) [-48807.054] (-48802.336) (-48839.242) * (-48827.619) (-48817.718) (-48813.874) [-48811.153] -- 0:34:13
509000 -- (-48816.032) [-48799.456] (-48812.473) (-48817.902) * (-48818.144) [-48823.650] (-48825.369) (-48835.264) -- 0:34:08
510000 -- [-48824.802] (-48811.252) (-48818.510) (-48839.675) * [-48812.945] (-48813.604) (-48827.052) (-48828.575) -- 0:34:04
Average standard deviation of split frequencies: 0.006195
511000 -- (-48815.518) [-48814.567] (-48821.383) (-48825.653) * (-48815.011) (-48801.792) (-48835.164) [-48823.577] -- 0:34:00
512000 -- (-48819.127) (-48817.481) [-48812.611] (-48820.765) * (-48807.697) [-48810.041] (-48828.014) (-48812.470) -- 0:33:55
513000 -- (-48815.284) (-48824.136) [-48820.558] (-48818.841) * (-48807.326) [-48810.335] (-48824.081) (-48825.302) -- 0:33:51
514000 -- [-48816.385] (-48816.318) (-48831.792) (-48827.428) * [-48811.259] (-48831.432) (-48822.846) (-48825.136) -- 0:33:48
515000 -- (-48813.364) [-48815.561] (-48810.831) (-48809.587) * (-48824.120) (-48818.653) (-48820.845) [-48820.686] -- 0:33:43
Average standard deviation of split frequencies: 0.005938
516000 -- (-48810.320) (-48821.389) [-48813.349] (-48828.753) * (-48827.189) (-48814.732) [-48828.410] (-48812.103) -- 0:33:39
517000 -- [-48819.254] (-48821.321) (-48823.175) (-48834.671) * [-48809.045] (-48804.732) (-48816.851) (-48822.078) -- 0:33:35
518000 -- [-48810.348] (-48800.302) (-48831.169) (-48810.759) * (-48834.802) [-48808.197] (-48818.934) (-48838.458) -- 0:33:30
519000 -- [-48821.500] (-48818.689) (-48832.691) (-48822.011) * (-48815.347) [-48807.420] (-48814.309) (-48824.764) -- 0:33:27
520000 -- [-48809.736] (-48812.622) (-48825.541) (-48815.944) * (-48841.669) [-48809.566] (-48817.915) (-48828.266) -- 0:33:23
Average standard deviation of split frequencies: 0.005980
521000 -- (-48812.396) (-48814.842) (-48837.276) [-48815.504] * (-48819.827) (-48808.154) [-48810.978] (-48830.324) -- 0:33:18
522000 -- [-48808.883] (-48830.629) (-48809.288) (-48814.801) * (-48823.913) [-48806.900] (-48812.001) (-48806.036) -- 0:33:15
523000 -- (-48804.886) (-48839.392) (-48844.721) [-48808.526] * (-48829.825) [-48810.958] (-48814.411) (-48813.843) -- 0:33:10
524000 -- [-48819.425] (-48813.412) (-48825.533) (-48812.264) * [-48812.763] (-48844.136) (-48808.761) (-48806.125) -- 0:33:06
525000 -- [-48803.099] (-48814.959) (-48822.387) (-48825.994) * (-48818.858) (-48825.818) [-48806.143] (-48830.290) -- 0:33:02
Average standard deviation of split frequencies: 0.005660
526000 -- [-48806.963] (-48812.833) (-48827.946) (-48834.128) * [-48809.973] (-48820.905) (-48807.552) (-48812.970) -- 0:32:58
527000 -- [-48800.566] (-48815.887) (-48832.462) (-48833.430) * (-48809.849) (-48816.130) (-48846.822) [-48820.028] -- 0:32:53
528000 -- (-48809.762) (-48820.617) [-48810.786] (-48822.831) * (-48828.768) [-48822.754] (-48816.167) (-48816.876) -- 0:32:49
529000 -- (-48818.651) (-48831.366) [-48809.111] (-48810.429) * [-48816.234] (-48837.386) (-48802.335) (-48810.484) -- 0:32:45
530000 -- (-48825.990) (-48830.215) (-48819.271) [-48810.324] * (-48824.699) [-48818.488] (-48819.355) (-48815.760) -- 0:32:40
Average standard deviation of split frequencies: 0.005868
531000 -- (-48826.439) (-48828.776) [-48809.829] (-48811.809) * (-48849.338) (-48822.591) (-48817.662) [-48814.141] -- 0:32:37
532000 -- (-48833.453) (-48825.598) [-48814.093] (-48810.057) * (-48826.163) (-48812.810) (-48826.847) [-48813.280] -- 0:32:32
533000 -- [-48828.232] (-48819.267) (-48805.427) (-48808.327) * (-48815.080) (-48812.670) (-48822.332) [-48806.007] -- 0:32:28
534000 -- (-48815.656) (-48819.105) [-48807.705] (-48838.748) * (-48814.762) (-48823.863) [-48822.113] (-48816.801) -- 0:32:24
535000 -- (-48815.641) (-48825.385) [-48802.689] (-48817.388) * (-48822.603) [-48814.044] (-48822.213) (-48810.514) -- 0:32:19
Average standard deviation of split frequencies: 0.005832
536000 -- [-48813.542] (-48815.550) (-48809.696) (-48833.879) * [-48814.144] (-48817.654) (-48823.699) (-48819.751) -- 0:32:15
537000 -- (-48806.369) (-48804.974) [-48813.818] (-48819.756) * (-48823.521) (-48813.804) (-48820.269) [-48817.608] -- 0:32:11
538000 -- [-48816.103] (-48824.664) (-48822.491) (-48817.430) * (-48826.947) (-48805.912) (-48810.913) [-48804.515] -- 0:32:07
539000 -- (-48805.663) (-48809.819) (-48806.822) [-48812.250] * (-48824.580) (-48812.220) (-48813.924) [-48811.155] -- 0:32:03
540000 -- [-48802.464] (-48822.529) (-48812.055) (-48817.668) * (-48813.254) (-48821.552) (-48809.434) [-48817.042] -- 0:31:59
Average standard deviation of split frequencies: 0.005576
541000 -- [-48805.848] (-48826.132) (-48821.138) (-48812.239) * (-48826.737) [-48816.830] (-48824.316) (-48823.827) -- 0:31:54
542000 -- (-48817.041) (-48808.239) [-48805.341] (-48811.290) * (-48826.665) (-48819.936) [-48817.845] (-48830.095) -- 0:31:50
543000 -- (-48818.762) (-48818.459) [-48804.470] (-48813.262) * (-48817.603) (-48822.701) [-48821.567] (-48816.376) -- 0:31:46
544000 -- [-48806.556] (-48800.427) (-48802.480) (-48817.661) * (-48837.704) (-48837.750) [-48811.463] (-48816.292) -- 0:31:41
545000 -- (-48814.382) (-48824.095) [-48801.622] (-48813.974) * (-48830.994) (-48823.021) [-48810.362] (-48812.917) -- 0:31:37
Average standard deviation of split frequencies: 0.005203
546000 -- (-48806.783) [-48810.849] (-48828.298) (-48813.403) * (-48821.646) (-48806.652) (-48818.998) [-48808.576] -- 0:31:34
547000 -- (-48822.296) (-48823.788) (-48830.635) [-48814.561] * [-48806.707] (-48818.157) (-48816.408) (-48818.721) -- 0:31:29
548000 -- (-48817.949) (-48816.208) [-48802.301] (-48814.141) * [-48817.287] (-48826.426) (-48832.614) (-48843.123) -- 0:31:25
549000 -- (-48819.460) (-48811.555) [-48806.655] (-48830.784) * (-48819.573) (-48829.422) (-48809.572) [-48808.791] -- 0:31:21
550000 -- [-48813.237] (-48826.814) (-48824.647) (-48828.803) * (-48835.994) (-48837.435) (-48811.989) [-48809.686] -- 0:31:16
Average standard deviation of split frequencies: 0.005091
551000 -- (-48829.956) (-48822.655) [-48818.944] (-48811.341) * (-48824.159) (-48807.924) (-48819.538) [-48829.204] -- 0:31:12
552000 -- (-48828.367) [-48805.253] (-48815.912) (-48816.944) * (-48834.827) (-48815.894) [-48815.384] (-48815.966) -- 0:31:08
553000 -- (-48820.939) [-48822.673] (-48824.634) (-48828.264) * (-48820.863) (-48819.896) [-48808.100] (-48814.720) -- 0:31:03
554000 -- [-48812.893] (-48825.574) (-48810.882) (-48815.565) * (-48824.802) (-48818.327) (-48811.464) [-48802.808] -- 0:31:00
555000 -- (-48820.997) (-48834.689) (-48804.986) [-48832.459] * [-48819.139] (-48816.655) (-48809.105) (-48810.912) -- 0:30:56
Average standard deviation of split frequencies: 0.005288
556000 -- [-48808.536] (-48817.059) (-48821.006) (-48813.313) * (-48814.183) (-48828.769) (-48811.207) [-48808.138] -- 0:30:51
557000 -- (-48829.691) (-48822.611) (-48811.996) [-48804.962] * (-48822.671) (-48821.664) [-48823.949] (-48830.831) -- 0:30:47
558000 -- (-48801.617) (-48814.065) (-48832.021) [-48832.597] * [-48812.386] (-48804.008) (-48832.691) (-48811.248) -- 0:30:43
559000 -- (-48820.835) [-48816.707] (-48814.934) (-48811.297) * (-48811.491) [-48806.125] (-48814.220) (-48823.003) -- 0:30:38
560000 -- (-48811.946) (-48817.449) (-48821.033) [-48804.349] * (-48821.288) (-48809.074) [-48814.599] (-48817.027) -- 0:30:35
Average standard deviation of split frequencies: 0.005664
561000 -- (-48812.565) (-48818.649) [-48817.226] (-48817.404) * (-48815.004) (-48840.683) (-48812.527) [-48817.678] -- 0:30:31
562000 -- (-48831.817) (-48817.087) [-48813.284] (-48828.215) * [-48813.844] (-48829.822) (-48812.032) (-48815.670) -- 0:30:26
563000 -- (-48819.859) (-48815.233) [-48822.686] (-48833.687) * (-48818.280) (-48810.834) [-48811.146] (-48824.436) -- 0:30:22
564000 -- [-48811.702] (-48828.072) (-48825.537) (-48814.673) * (-48817.162) [-48809.419] (-48816.456) (-48819.478) -- 0:30:18
565000 -- (-48818.756) [-48824.605] (-48811.293) (-48818.410) * (-48823.860) [-48808.760] (-48811.443) (-48822.814) -- 0:30:13
Average standard deviation of split frequencies: 0.005764
566000 -- (-48810.197) (-48811.831) (-48824.341) [-48807.107] * (-48824.549) (-48814.064) [-48806.725] (-48822.577) -- 0:30:09
567000 -- (-48825.711) [-48804.596] (-48816.080) (-48822.450) * [-48815.481] (-48812.064) (-48823.443) (-48832.470) -- 0:30:06
568000 -- [-48823.592] (-48817.078) (-48825.152) (-48831.158) * (-48810.084) [-48810.348] (-48827.956) (-48815.194) -- 0:30:01
569000 -- [-48811.688] (-48807.076) (-48825.507) (-48830.101) * [-48817.177] (-48848.261) (-48813.751) (-48814.127) -- 0:29:57
570000 -- (-48832.347) (-48826.259) [-48816.941] (-48812.204) * [-48810.215] (-48824.856) (-48811.090) (-48831.233) -- 0:29:53
Average standard deviation of split frequencies: 0.005652
571000 -- (-48819.579) (-48817.164) (-48827.723) [-48811.604] * (-48823.533) (-48833.040) [-48810.152] (-48843.008) -- 0:29:48
572000 -- (-48813.503) (-48815.122) [-48808.605] (-48828.851) * (-48815.708) (-48823.040) [-48808.024] (-48835.709) -- 0:29:44
573000 -- [-48812.722] (-48810.547) (-48824.356) (-48825.168) * (-48822.573) (-48814.963) [-48813.442] (-48845.333) -- 0:29:41
574000 -- (-48826.541) (-48811.482) [-48828.742] (-48813.235) * (-48826.176) (-48821.046) (-48828.997) [-48813.953] -- 0:29:36
575000 -- (-48821.358) [-48816.321] (-48809.821) (-48814.956) * (-48819.595) (-48819.604) (-48817.925) [-48813.430] -- 0:29:32
Average standard deviation of split frequencies: 0.005341
576000 -- [-48812.495] (-48815.597) (-48815.877) (-48840.611) * (-48808.603) (-48837.528) (-48824.088) [-48810.582] -- 0:29:28
577000 -- [-48804.771] (-48813.336) (-48811.359) (-48836.310) * [-48822.667] (-48810.338) (-48802.239) (-48826.531) -- 0:29:23
578000 -- [-48811.473] (-48815.111) (-48813.847) (-48820.064) * [-48819.232] (-48825.527) (-48805.534) (-48833.257) -- 0:29:19
579000 -- (-48819.091) [-48800.828] (-48819.878) (-48821.830) * (-48812.698) (-48808.287) [-48814.445] (-48830.325) -- 0:29:15
580000 -- (-48829.872) (-48813.650) [-48808.508] (-48811.493) * [-48813.905] (-48828.475) (-48824.147) (-48817.433) -- 0:29:11
Average standard deviation of split frequencies: 0.005555
581000 -- (-48816.697) (-48840.272) (-48800.425) [-48804.194] * (-48816.629) (-48823.484) [-48801.880] (-48818.305) -- 0:29:07
582000 -- [-48815.216] (-48814.607) (-48802.207) (-48819.442) * (-48816.646) (-48813.085) (-48815.870) [-48816.531] -- 0:29:03
583000 -- [-48802.808] (-48812.114) (-48816.055) (-48830.499) * (-48811.771) (-48822.127) [-48804.230] (-48811.714) -- 0:28:58
584000 -- (-48816.135) [-48808.312] (-48835.973) (-48817.599) * (-48820.256) [-48805.672] (-48820.573) (-48829.524) -- 0:28:54
585000 -- [-48819.663] (-48822.279) (-48833.266) (-48817.161) * (-48832.222) (-48822.536) (-48813.765) [-48812.553] -- 0:28:50
Average standard deviation of split frequencies: 0.005652
586000 -- (-48809.863) (-48820.568) (-48815.953) [-48804.303] * (-48829.536) (-48812.494) [-48813.126] (-48823.631) -- 0:28:45
587000 -- [-48806.918] (-48817.196) (-48833.893) (-48830.160) * (-48832.527) (-48828.765) [-48807.015] (-48820.857) -- 0:28:41
588000 -- (-48830.732) (-48812.764) (-48816.597) [-48801.515] * (-48831.794) (-48829.715) [-48802.726] (-48825.772) -- 0:28:37
589000 -- (-48820.030) (-48828.174) (-48824.030) [-48799.911] * (-48824.851) (-48813.115) (-48808.179) [-48797.421] -- 0:28:33
590000 -- (-48802.873) (-48826.608) (-48810.798) [-48808.107] * (-48817.692) [-48810.828] (-48816.866) (-48830.056) -- 0:28:29
Average standard deviation of split frequencies: 0.005755
591000 -- [-48807.500] (-48820.197) (-48817.423) (-48832.151) * [-48818.203] (-48815.861) (-48826.389) (-48843.085) -- 0:28:25
592000 -- (-48815.178) (-48820.188) [-48814.466] (-48820.755) * (-48812.657) [-48807.877] (-48812.914) (-48817.626) -- 0:28:20
593000 -- [-48806.124] (-48824.317) (-48810.774) (-48822.309) * (-48806.079) (-48832.541) (-48818.095) [-48812.740] -- 0:28:16
594000 -- (-48813.321) (-48829.585) [-48803.107] (-48822.798) * (-48808.526) (-48811.449) (-48828.562) [-48808.644] -- 0:28:12
595000 -- (-48817.377) (-48824.554) [-48807.875] (-48814.806) * (-48810.560) [-48796.584] (-48827.012) (-48814.507) -- 0:28:08
Average standard deviation of split frequencies: 0.005890
596000 -- (-48826.314) (-48842.336) (-48820.472) [-48803.494] * [-48809.942] (-48823.082) (-48822.657) (-48818.938) -- 0:28:04
597000 -- (-48811.810) [-48817.786] (-48822.633) (-48821.848) * (-48817.935) [-48810.167] (-48827.335) (-48809.494) -- 0:28:00
598000 -- [-48815.270] (-48805.382) (-48816.364) (-48830.355) * (-48811.114) [-48816.238] (-48828.526) (-48813.623) -- 0:27:55
599000 -- (-48816.072) (-48804.696) [-48809.132] (-48832.794) * (-48815.345) [-48807.653] (-48824.429) (-48820.878) -- 0:27:51
600000 -- (-48805.084) [-48805.751] (-48814.154) (-48816.131) * (-48844.607) (-48816.214) [-48805.530] (-48822.431) -- 0:27:47
Average standard deviation of split frequencies: 0.005886
601000 -- (-48822.909) (-48820.379) [-48811.439] (-48827.381) * (-48818.844) (-48819.688) [-48811.311] (-48806.371) -- 0:27:43
602000 -- (-48811.012) (-48823.699) [-48819.742] (-48842.839) * (-48826.528) [-48827.214] (-48826.700) (-48815.119) -- 0:27:39
603000 -- (-48819.077) (-48822.541) (-48812.465) [-48817.859] * (-48802.832) [-48808.568] (-48806.775) (-48811.106) -- 0:27:35
604000 -- (-48818.878) (-48814.195) [-48801.685] (-48824.259) * (-48825.422) (-48827.859) (-48814.580) [-48802.125] -- 0:27:30
605000 -- (-48807.116) [-48805.965] (-48798.792) (-48820.299) * (-48806.428) (-48821.547) [-48807.360] (-48796.935) -- 0:27:26
Average standard deviation of split frequencies: 0.005875
606000 -- (-48815.395) (-48814.615) [-48806.995] (-48834.727) * [-48811.558] (-48833.677) (-48823.175) (-48811.635) -- 0:27:22
607000 -- [-48814.241] (-48819.706) (-48814.958) (-48842.209) * [-48809.787] (-48811.768) (-48818.747) (-48817.322) -- 0:27:18
608000 -- (-48817.575) (-48823.726) [-48811.791] (-48811.990) * (-48817.190) (-48822.791) (-48805.480) [-48808.214] -- 0:27:13
609000 -- [-48818.867] (-48819.823) (-48819.281) (-48803.290) * (-48817.413) (-48810.419) [-48802.652] (-48811.278) -- 0:27:10
610000 -- (-48818.908) (-48821.366) [-48817.091] (-48808.231) * [-48808.466] (-48814.664) (-48831.809) (-48827.527) -- 0:27:05
Average standard deviation of split frequencies: 0.005769
611000 -- (-48815.712) [-48815.022] (-48804.760) (-48829.936) * [-48797.798] (-48817.314) (-48823.768) (-48808.852) -- 0:27:01
612000 -- (-48807.352) (-48810.861) [-48796.826] (-48826.633) * (-48821.857) [-48816.634] (-48828.220) (-48814.226) -- 0:26:57
613000 -- [-48803.499] (-48818.631) (-48814.323) (-48807.605) * [-48806.523] (-48820.788) (-48815.151) (-48814.041) -- 0:26:53
614000 -- (-48829.226) (-48827.595) [-48808.431] (-48813.935) * [-48811.734] (-48833.159) (-48810.025) (-48815.170) -- 0:26:48
615000 -- (-48808.026) (-48811.262) (-48815.218) [-48803.421] * [-48814.856] (-48817.205) (-48809.911) (-48830.173) -- 0:26:45
Average standard deviation of split frequencies: 0.005719
616000 -- (-48823.812) (-48819.243) (-48809.513) [-48807.553] * [-48815.649] (-48826.674) (-48808.948) (-48832.956) -- 0:26:40
617000 -- (-48802.094) (-48816.075) (-48814.580) [-48815.961] * (-48823.560) (-48826.645) [-48813.331] (-48825.347) -- 0:26:36
618000 -- (-48800.867) (-48833.974) [-48812.098] (-48817.040) * [-48811.114] (-48821.989) (-48810.124) (-48821.781) -- 0:26:32
619000 -- (-48819.341) (-48815.404) (-48825.309) [-48814.657] * (-48818.694) (-48813.023) (-48817.458) [-48804.095] -- 0:26:28
620000 -- (-48823.181) [-48800.968] (-48818.855) (-48823.682) * (-48807.658) [-48810.570] (-48804.650) (-48815.556) -- 0:26:23
Average standard deviation of split frequencies: 0.005736
621000 -- [-48816.668] (-48820.357) (-48828.743) (-48838.325) * (-48811.242) [-48802.168] (-48811.682) (-48817.775) -- 0:26:19
622000 -- (-48812.116) (-48804.817) [-48806.946] (-48818.383) * (-48814.074) [-48808.495] (-48812.972) (-48828.769) -- 0:26:15
623000 -- (-48820.742) (-48804.780) [-48820.926] (-48823.666) * (-48817.479) (-48817.458) (-48818.395) [-48803.711] -- 0:26:11
624000 -- (-48819.188) [-48808.796] (-48820.149) (-48818.442) * (-48823.958) (-48829.207) [-48807.475] (-48808.809) -- 0:26:07
625000 -- [-48825.914] (-48814.982) (-48817.166) (-48826.855) * [-48822.918] (-48839.252) (-48805.163) (-48807.847) -- 0:26:03
Average standard deviation of split frequencies: 0.005668
626000 -- [-48829.728] (-48828.125) (-48820.946) (-48815.039) * (-48819.113) (-48845.342) (-48811.373) [-48799.105] -- 0:25:58
627000 -- (-48821.472) (-48813.968) [-48821.148] (-48810.568) * [-48820.668] (-48824.704) (-48819.557) (-48810.729) -- 0:25:54
628000 -- (-48827.196) [-48806.233] (-48818.935) (-48812.483) * (-48818.570) (-48817.596) (-48813.748) [-48810.260] -- 0:25:50
629000 -- [-48815.747] (-48811.143) (-48827.030) (-48826.153) * (-48812.774) (-48813.598) (-48822.213) [-48812.257] -- 0:25:45
630000 -- (-48824.143) [-48810.132] (-48805.929) (-48835.575) * [-48810.198] (-48821.695) (-48822.469) (-48816.463) -- 0:25:42
Average standard deviation of split frequencies: 0.005567
631000 -- (-48819.897) [-48805.957] (-48809.440) (-48839.185) * (-48828.095) (-48822.888) [-48815.907] (-48831.849) -- 0:25:37
632000 -- (-48839.665) (-48832.884) [-48800.004] (-48816.891) * (-48834.018) [-48810.983] (-48813.017) (-48828.522) -- 0:25:33
633000 -- [-48829.997] (-48833.952) (-48822.722) (-48830.027) * [-48813.153] (-48835.373) (-48823.235) (-48837.146) -- 0:25:29
634000 -- (-48831.042) [-48803.655] (-48810.783) (-48836.618) * (-48809.942) [-48811.095] (-48812.923) (-48834.030) -- 0:25:25
635000 -- (-48822.952) (-48802.584) [-48810.726] (-48814.151) * (-48809.925) [-48805.890] (-48810.328) (-48839.538) -- 0:25:20
Average standard deviation of split frequencies: 0.005383
636000 -- (-48809.161) (-48809.706) [-48809.082] (-48832.339) * (-48813.527) (-48804.715) (-48809.480) [-48809.244] -- 0:25:16
637000 -- (-48816.833) (-48820.173) [-48806.202] (-48828.438) * (-48824.245) [-48812.607] (-48832.166) (-48808.957) -- 0:25:12
638000 -- (-48808.698) (-48803.023) [-48819.039] (-48820.818) * (-48833.703) (-48806.226) (-48827.402) [-48810.183] -- 0:25:08
639000 -- (-48818.935) [-48808.087] (-48815.666) (-48818.233) * (-48817.746) [-48813.175] (-48840.199) (-48816.533) -- 0:25:04
640000 -- (-48824.141) [-48814.618] (-48830.119) (-48818.968) * (-48813.051) (-48820.299) (-48832.679) [-48800.229] -- 0:25:00
Average standard deviation of split frequencies: 0.005751
641000 -- (-48827.728) (-48802.376) (-48825.936) [-48816.807] * [-48804.997] (-48818.447) (-48820.611) (-48822.552) -- 0:24:55
642000 -- (-48825.864) [-48805.962] (-48811.777) (-48827.858) * (-48814.127) (-48807.044) [-48823.006] (-48814.980) -- 0:24:51
643000 -- (-48820.284) (-48811.289) [-48809.266] (-48827.627) * (-48825.471) [-48811.385] (-48808.867) (-48817.180) -- 0:24:47
644000 -- (-48817.073) [-48815.787] (-48810.041) (-48818.038) * [-48813.869] (-48808.246) (-48816.535) (-48813.169) -- 0:24:43
645000 -- [-48804.476] (-48817.525) (-48828.625) (-48839.283) * (-48813.130) [-48804.072] (-48827.093) (-48819.450) -- 0:24:38
Average standard deviation of split frequencies: 0.005185
646000 -- [-48807.412] (-48812.665) (-48828.038) (-48821.907) * [-48818.451] (-48809.588) (-48822.124) (-48807.489) -- 0:24:35
647000 -- (-48824.970) (-48819.378) (-48815.745) [-48807.186] * [-48798.051] (-48813.201) (-48817.399) (-48817.192) -- 0:24:30
648000 -- (-48815.717) (-48801.105) [-48809.063] (-48814.441) * (-48808.639) (-48824.869) (-48809.378) [-48819.826] -- 0:24:26
649000 -- [-48827.054] (-48826.343) (-48814.480) (-48812.354) * [-48809.770] (-48841.285) (-48811.033) (-48813.926) -- 0:24:22
650000 -- (-48822.568) (-48827.124) (-48821.393) [-48817.014] * [-48810.038] (-48822.113) (-48808.568) (-48819.353) -- 0:24:18
Average standard deviation of split frequencies: 0.005281
651000 -- (-48826.647) [-48816.249] (-48827.455) (-48839.909) * (-48810.914) [-48812.448] (-48817.876) (-48819.325) -- 0:24:14
652000 -- (-48822.429) [-48809.201] (-48836.463) (-48819.355) * (-48817.199) (-48815.021) [-48815.999] (-48816.040) -- 0:24:10
653000 -- (-48824.117) [-48808.596] (-48828.674) (-48812.020) * (-48847.898) (-48814.628) (-48801.152) [-48815.701] -- 0:24:05
654000 -- (-48816.156) (-48839.895) (-48819.210) [-48818.020] * (-48831.738) [-48821.774] (-48823.614) (-48817.781) -- 0:24:01
655000 -- (-48807.651) (-48826.326) [-48798.115] (-48823.979) * (-48814.605) (-48842.226) [-48812.114] (-48804.077) -- 0:23:57
Average standard deviation of split frequencies: 0.005484
656000 -- (-48828.453) (-48818.605) [-48803.717] (-48816.567) * [-48804.025] (-48833.933) (-48824.712) (-48801.249) -- 0:23:53
657000 -- (-48819.395) [-48801.035] (-48796.837) (-48830.249) * (-48818.393) (-48816.453) (-48816.414) [-48806.902] -- 0:23:49
658000 -- (-48826.748) (-48812.150) [-48801.807] (-48826.138) * [-48807.460] (-48820.257) (-48822.271) (-48802.122) -- 0:23:45
659000 -- (-48809.222) [-48820.343] (-48822.521) (-48828.428) * (-48822.845) (-48818.108) (-48811.523) [-48805.922] -- 0:23:40
660000 -- (-48818.237) [-48805.779] (-48816.981) (-48818.279) * (-48824.948) (-48822.749) (-48832.498) [-48806.343] -- 0:23:36
Average standard deviation of split frequencies: 0.005483
661000 -- (-48822.896) (-48829.896) [-48810.151] (-48807.274) * (-48814.017) (-48816.274) (-48823.243) [-48800.772] -- 0:23:32
662000 -- (-48830.123) (-48813.549) (-48819.476) [-48817.156] * [-48810.772] (-48824.883) (-48844.601) (-48810.939) -- 0:23:28
663000 -- (-48825.132) [-48816.532] (-48807.222) (-48812.545) * [-48801.944] (-48816.273) (-48819.429) (-48811.915) -- 0:23:24
664000 -- (-48813.817) (-48807.149) (-48828.403) [-48819.152] * (-48804.243) [-48818.773] (-48825.330) (-48824.931) -- 0:23:20
665000 -- (-48840.728) [-48812.317] (-48822.551) (-48822.887) * (-48807.959) (-48833.665) [-48814.195] (-48808.370) -- 0:23:15
Average standard deviation of split frequencies: 0.005290
666000 -- (-48815.928) [-48809.913] (-48825.864) (-48826.195) * [-48802.850] (-48821.812) (-48833.450) (-48817.945) -- 0:23:11
667000 -- (-48815.018) [-48813.837] (-48822.190) (-48815.569) * (-48823.953) (-48825.421) [-48798.937] (-48817.564) -- 0:23:07
668000 -- (-48822.711) (-48828.258) [-48809.306] (-48821.166) * (-48829.944) (-48814.428) [-48812.209] (-48811.320) -- 0:23:03
669000 -- [-48813.010] (-48811.414) (-48807.202) (-48817.055) * (-48827.054) (-48814.887) [-48812.350] (-48812.493) -- 0:22:59
670000 -- (-48816.009) (-48820.046) [-48813.599] (-48824.143) * (-48809.495) (-48817.450) (-48816.066) [-48810.611] -- 0:22:55
Average standard deviation of split frequencies: 0.005179
671000 -- (-48819.751) [-48811.419] (-48806.229) (-48819.258) * (-48825.364) (-48816.156) [-48810.010] (-48828.021) -- 0:22:50
672000 -- (-48808.789) (-48839.025) (-48813.676) [-48803.370] * (-48823.515) [-48812.451] (-48823.381) (-48825.414) -- 0:22:46
673000 -- (-48824.513) (-48838.457) [-48812.874] (-48827.664) * (-48822.398) (-48829.511) [-48818.950] (-48821.795) -- 0:22:42
674000 -- (-48818.543) (-48831.411) [-48804.428] (-48832.790) * (-48835.239) [-48826.563] (-48822.034) (-48818.577) -- 0:22:38
675000 -- (-48803.832) [-48817.856] (-48826.115) (-48816.766) * (-48830.842) (-48832.470) [-48816.060] (-48825.253) -- 0:22:34
Average standard deviation of split frequencies: 0.005028
676000 -- (-48807.479) (-48823.756) [-48803.337] (-48822.232) * (-48823.573) (-48824.310) [-48816.975] (-48809.121) -- 0:22:30
677000 -- (-48809.359) (-48815.929) [-48797.261] (-48822.016) * (-48820.186) (-48812.881) (-48812.828) [-48803.437] -- 0:22:25
678000 -- (-48812.460) (-48818.941) [-48805.402] (-48830.930) * (-48822.155) (-48807.705) [-48804.919] (-48811.142) -- 0:22:21
679000 -- [-48813.426] (-48807.746) (-48815.507) (-48824.749) * (-48835.654) (-48805.076) [-48812.056] (-48817.602) -- 0:22:17
680000 -- (-48802.951) [-48812.776] (-48819.578) (-48820.404) * (-48823.649) (-48807.253) (-48828.001) [-48810.997] -- 0:22:13
Average standard deviation of split frequencies: 0.004921
681000 -- (-48807.745) [-48826.956] (-48818.039) (-48835.082) * (-48816.549) [-48804.786] (-48814.208) (-48810.073) -- 0:22:08
682000 -- [-48792.424] (-48835.453) (-48818.131) (-48817.677) * [-48809.034] (-48826.491) (-48811.061) (-48809.540) -- 0:22:04
683000 -- [-48811.143] (-48811.234) (-48828.974) (-48819.200) * (-48820.855) (-48813.687) (-48809.447) [-48805.297] -- 0:22:00
684000 -- [-48808.631] (-48825.529) (-48832.511) (-48819.004) * [-48817.441] (-48829.768) (-48826.855) (-48804.182) -- 0:21:56
685000 -- (-48811.299) [-48807.227] (-48822.000) (-48813.748) * (-48824.279) (-48835.786) [-48814.519] (-48799.679) -- 0:21:52
Average standard deviation of split frequencies: 0.004521
686000 -- [-48820.788] (-48812.963) (-48817.133) (-48825.772) * (-48825.314) (-48830.149) [-48799.155] (-48811.890) -- 0:21:48
687000 -- [-48816.997] (-48824.429) (-48819.160) (-48829.953) * (-48829.258) (-48818.206) [-48818.106] (-48831.093) -- 0:21:43
688000 -- (-48799.518) (-48818.646) (-48816.050) [-48823.747] * (-48823.423) (-48820.448) [-48806.251] (-48842.164) -- 0:21:39
689000 -- (-48808.878) (-48816.796) (-48811.768) [-48815.186] * (-48819.554) [-48817.531] (-48817.031) (-48817.885) -- 0:21:35
690000 -- (-48831.226) [-48826.641] (-48830.730) (-48819.103) * (-48812.905) (-48827.859) [-48818.798] (-48816.178) -- 0:21:31
Average standard deviation of split frequencies: 0.004436
691000 -- [-48808.654] (-48814.650) (-48834.475) (-48815.641) * (-48814.067) (-48827.493) [-48825.098] (-48835.907) -- 0:21:27
692000 -- [-48823.494] (-48818.740) (-48824.303) (-48809.281) * [-48804.855] (-48828.950) (-48828.535) (-48825.766) -- 0:21:23
693000 -- [-48808.686] (-48812.274) (-48824.931) (-48809.885) * (-48807.250) (-48821.117) (-48819.666) [-48810.732] -- 0:21:18
694000 -- (-48808.142) (-48804.537) (-48832.853) [-48808.286] * (-48823.894) (-48832.618) (-48826.840) [-48822.378] -- 0:21:14
695000 -- (-48806.342) (-48813.512) (-48820.785) [-48814.340] * (-48809.302) [-48820.623] (-48825.126) (-48815.855) -- 0:21:10
Average standard deviation of split frequencies: 0.004117
696000 -- (-48816.175) [-48794.271] (-48816.534) (-48820.140) * (-48822.476) [-48804.751] (-48820.341) (-48814.628) -- 0:21:06
697000 -- (-48810.822) [-48810.846] (-48818.147) (-48810.761) * [-48806.763] (-48805.205) (-48821.939) (-48808.593) -- 0:21:02
698000 -- (-48828.288) [-48813.148] (-48818.599) (-48810.245) * (-48815.404) (-48826.371) [-48803.207] (-48807.772) -- 0:20:58
699000 -- [-48811.635] (-48818.453) (-48811.647) (-48805.165) * (-48825.541) (-48822.279) [-48813.713] (-48823.740) -- 0:20:53
700000 -- (-48814.702) (-48824.613) [-48805.622] (-48828.819) * [-48811.981] (-48834.154) (-48820.527) (-48823.498) -- 0:20:49
Average standard deviation of split frequencies: 0.003913
701000 -- (-48845.964) [-48812.544] (-48804.674) (-48838.355) * (-48817.682) (-48813.959) (-48814.465) [-48808.568] -- 0:20:45
702000 -- (-48825.662) (-48817.147) [-48801.980] (-48814.346) * [-48810.529] (-48810.444) (-48824.106) (-48809.858) -- 0:20:41
703000 -- (-48826.779) [-48807.090] (-48806.239) (-48822.291) * (-48824.092) (-48824.612) (-48820.317) [-48812.362] -- 0:20:37
704000 -- (-48826.574) (-48824.290) [-48812.675] (-48829.538) * (-48826.877) [-48813.505] (-48810.162) (-48813.228) -- 0:20:33
705000 -- [-48806.696] (-48826.533) (-48816.715) (-48830.208) * (-48816.718) [-48812.844] (-48813.097) (-48828.978) -- 0:20:28
Average standard deviation of split frequencies: 0.004252
706000 -- [-48810.519] (-48828.609) (-48822.346) (-48823.304) * [-48817.034] (-48817.731) (-48814.228) (-48814.029) -- 0:20:24
707000 -- (-48829.628) (-48827.403) [-48808.022] (-48831.563) * (-48811.161) [-48811.531] (-48820.997) (-48828.654) -- 0:20:20
708000 -- (-48823.095) (-48822.309) [-48803.630] (-48832.362) * (-48831.940) (-48810.277) [-48804.020] (-48826.833) -- 0:20:16
709000 -- (-48820.106) (-48808.350) (-48817.150) [-48812.193] * (-48819.363) [-48811.635] (-48810.110) (-48822.005) -- 0:20:12
710000 -- (-48831.169) [-48811.360] (-48833.248) (-48815.337) * (-48828.935) (-48820.157) [-48811.206] (-48811.573) -- 0:20:08
Average standard deviation of split frequencies: 0.004137
711000 -- (-48826.156) (-48810.031) [-48818.925] (-48809.216) * (-48824.402) [-48802.895] (-48819.040) (-48811.140) -- 0:20:03
712000 -- (-48836.948) (-48828.659) (-48820.772) [-48811.878] * (-48843.547) [-48808.949] (-48815.827) (-48814.408) -- 0:19:59
713000 -- (-48825.707) [-48804.032] (-48810.886) (-48825.571) * (-48820.971) (-48845.232) [-48813.281] (-48822.405) -- 0:19:55
714000 -- (-48814.221) [-48805.614] (-48820.157) (-48818.379) * [-48805.846] (-48846.359) (-48817.154) (-48811.783) -- 0:19:51
715000 -- (-48814.540) [-48798.767] (-48818.182) (-48811.933) * [-48804.937] (-48831.221) (-48817.469) (-48835.276) -- 0:19:47
Average standard deviation of split frequencies: 0.004609
716000 -- (-48828.226) [-48812.594] (-48809.323) (-48820.657) * [-48806.278] (-48826.807) (-48821.023) (-48819.976) -- 0:19:42
717000 -- (-48815.615) (-48815.316) (-48815.357) [-48806.749] * (-48810.568) (-48822.150) [-48809.750] (-48800.087) -- 0:19:38
718000 -- (-48830.038) (-48806.791) (-48835.555) [-48805.048] * (-48817.105) (-48814.220) [-48807.473] (-48812.982) -- 0:19:34
719000 -- (-48832.419) (-48823.744) [-48816.073] (-48813.026) * (-48819.185) [-48815.936] (-48817.499) (-48799.508) -- 0:19:30
720000 -- (-48820.681) (-48806.141) [-48817.966] (-48810.857) * (-48815.453) [-48808.711] (-48830.415) (-48806.892) -- 0:19:26
Average standard deviation of split frequencies: 0.004958
721000 -- (-48821.842) [-48805.216] (-48817.133) (-48814.393) * (-48819.640) [-48806.190] (-48807.944) (-48809.627) -- 0:19:22
722000 -- (-48815.201) (-48818.033) [-48820.117] (-48814.173) * (-48816.680) (-48811.028) (-48818.662) [-48807.879] -- 0:19:17
723000 -- (-48823.409) [-48812.234] (-48814.105) (-48824.970) * [-48810.246] (-48809.733) (-48819.886) (-48829.699) -- 0:19:13
724000 -- (-48813.929) (-48813.421) [-48812.204] (-48822.048) * (-48806.918) [-48806.795] (-48820.511) (-48820.328) -- 0:19:09
725000 -- (-48838.228) [-48816.286] (-48826.523) (-48816.723) * (-48825.486) [-48806.333] (-48822.420) (-48807.691) -- 0:19:05
Average standard deviation of split frequencies: 0.005075
726000 -- (-48836.690) (-48808.591) [-48816.473] (-48808.110) * (-48807.456) [-48811.465] (-48806.667) (-48821.814) -- 0:19:01
727000 -- (-48823.457) (-48819.349) [-48820.501] (-48810.888) * (-48808.916) (-48817.210) (-48813.588) [-48820.869] -- 0:18:57
728000 -- (-48842.283) (-48811.686) [-48808.509] (-48825.719) * (-48818.010) [-48809.696] (-48820.700) (-48826.703) -- 0:18:52
729000 -- (-48820.908) (-48821.210) [-48811.437] (-48816.513) * (-48827.554) (-48816.338) [-48819.089] (-48821.105) -- 0:18:48
730000 -- (-48824.718) (-48810.445) (-48819.998) [-48819.807] * (-48818.252) [-48807.017] (-48820.166) (-48808.817) -- 0:18:44
Average standard deviation of split frequencies: 0.005127
731000 -- (-48829.638) (-48825.502) (-48806.377) [-48808.358] * (-48821.485) (-48822.096) [-48811.026] (-48809.886) -- 0:18:40
732000 -- (-48821.631) (-48844.836) (-48807.816) [-48815.550] * [-48802.433] (-48827.698) (-48806.382) (-48836.028) -- 0:18:36
733000 -- (-48829.121) (-48825.750) [-48811.277] (-48828.062) * (-48805.666) (-48819.988) [-48810.713] (-48825.065) -- 0:18:32
734000 -- [-48808.958] (-48829.904) (-48810.402) (-48822.597) * [-48808.150] (-48806.703) (-48824.938) (-48822.417) -- 0:18:27
735000 -- (-48819.798) (-48823.303) [-48807.478] (-48814.547) * [-48802.512] (-48824.178) (-48822.931) (-48820.180) -- 0:18:23
Average standard deviation of split frequencies: 0.005208
736000 -- (-48836.297) (-48813.153) (-48827.036) [-48817.219] * (-48810.515) [-48821.064] (-48815.765) (-48836.441) -- 0:18:19
737000 -- (-48850.172) (-48816.511) [-48820.066] (-48811.870) * (-48821.479) [-48819.704] (-48811.187) (-48829.269) -- 0:18:15
738000 -- (-48826.372) (-48831.649) (-48818.525) [-48811.658] * [-48816.192] (-48821.661) (-48818.828) (-48844.183) -- 0:18:11
739000 -- (-48822.242) (-48817.782) (-48812.319) [-48815.857] * (-48814.250) (-48826.483) [-48803.092] (-48840.197) -- 0:18:07
740000 -- [-48809.600] (-48809.931) (-48818.896) (-48812.505) * (-48823.753) [-48811.460] (-48814.259) (-48811.741) -- 0:18:02
Average standard deviation of split frequencies: 0.004974
741000 -- (-48812.970) [-48810.764] (-48817.962) (-48819.520) * [-48807.053] (-48823.951) (-48810.239) (-48808.438) -- 0:17:58
742000 -- (-48832.711) (-48818.741) (-48817.248) [-48817.641] * (-48832.086) (-48824.421) [-48802.717] (-48816.335) -- 0:17:54
743000 -- (-48828.964) (-48824.367) (-48805.687) [-48833.407] * (-48834.901) (-48825.031) [-48809.262] (-48821.190) -- 0:17:50
744000 -- (-48817.763) (-48807.720) (-48811.039) [-48805.275] * [-48815.012] (-48816.101) (-48811.006) (-48817.940) -- 0:17:46
745000 -- (-48829.334) (-48824.462) [-48806.810] (-48804.551) * (-48821.095) (-48836.192) [-48818.979] (-48809.104) -- 0:17:42
Average standard deviation of split frequencies: 0.005205
746000 -- (-48828.623) (-48814.495) [-48804.141] (-48820.664) * (-48827.074) (-48821.874) (-48802.443) [-48807.181] -- 0:17:37
747000 -- (-48828.429) [-48810.597] (-48811.287) (-48822.574) * [-48811.291] (-48813.352) (-48827.487) (-48811.653) -- 0:17:33
748000 -- (-48809.069) [-48814.171] (-48844.541) (-48811.524) * (-48814.452) (-48813.608) (-48817.694) [-48813.861] -- 0:17:29
749000 -- (-48817.357) [-48803.869] (-48825.675) (-48816.958) * (-48819.853) [-48806.961] (-48821.344) (-48813.953) -- 0:17:25
750000 -- (-48813.380) [-48816.392] (-48814.825) (-48820.031) * (-48822.242) [-48795.857] (-48825.492) (-48803.150) -- 0:17:21
Average standard deviation of split frequencies: 0.005553
751000 -- [-48805.749] (-48821.417) (-48832.450) (-48814.007) * (-48814.696) (-48828.844) (-48814.727) [-48811.101] -- 0:17:17
752000 -- [-48801.082] (-48826.493) (-48817.677) (-48823.049) * (-48818.178) (-48834.886) (-48817.653) [-48806.174] -- 0:17:12
753000 -- [-48816.781] (-48830.212) (-48823.848) (-48822.785) * (-48809.117) [-48814.230] (-48824.293) (-48802.628) -- 0:17:08
754000 -- (-48819.262) (-48817.766) [-48820.257] (-48833.183) * (-48811.921) [-48819.228] (-48822.262) (-48809.420) -- 0:17:04
755000 -- (-48820.400) (-48819.037) (-48824.695) [-48809.481] * [-48795.277] (-48835.215) (-48819.096) (-48828.285) -- 0:17:00
Average standard deviation of split frequencies: 0.005415
756000 -- (-48810.639) (-48820.161) [-48818.466] (-48814.767) * [-48806.169] (-48822.164) (-48811.691) (-48826.232) -- 0:16:56
757000 -- (-48834.174) [-48807.711] (-48812.740) (-48815.881) * (-48818.516) (-48817.340) (-48824.524) [-48813.654] -- 0:16:52
758000 -- [-48818.107] (-48815.899) (-48821.754) (-48807.495) * [-48807.406] (-48831.905) (-48823.018) (-48810.639) -- 0:16:47
759000 -- [-48817.722] (-48819.527) (-48819.254) (-48820.674) * (-48821.576) (-48817.059) (-48820.435) [-48808.032] -- 0:16:43
760000 -- (-48822.744) (-48829.526) [-48810.604] (-48815.614) * (-48825.173) (-48816.665) [-48819.130] (-48815.699) -- 0:16:39
Average standard deviation of split frequencies: 0.005659
761000 -- [-48797.361] (-48824.683) (-48810.323) (-48806.924) * (-48823.187) [-48803.188] (-48827.480) (-48822.376) -- 0:16:35
762000 -- (-48816.056) (-48839.681) (-48811.860) [-48803.957] * [-48815.568] (-48810.971) (-48828.128) (-48808.101) -- 0:16:31
763000 -- (-48828.617) (-48828.416) [-48799.861] (-48816.392) * (-48829.086) (-48821.359) (-48818.034) [-48818.657] -- 0:16:26
764000 -- (-48827.335) (-48825.061) (-48827.486) [-48815.365] * (-48809.435) [-48815.303] (-48820.037) (-48822.099) -- 0:16:22
765000 -- (-48818.876) (-48831.233) [-48811.321] (-48818.172) * (-48801.320) (-48822.177) [-48810.990] (-48815.095) -- 0:16:18
Average standard deviation of split frequencies: 0.005684
766000 -- (-48826.345) (-48826.075) [-48805.921] (-48826.453) * (-48820.646) (-48843.244) [-48809.691] (-48819.255) -- 0:16:14
767000 -- (-48812.358) (-48830.003) (-48814.713) [-48807.999] * [-48816.329] (-48817.790) (-48815.959) (-48812.177) -- 0:16:10
768000 -- (-48832.079) [-48809.039] (-48818.904) (-48811.942) * (-48823.737) [-48815.418] (-48825.059) (-48818.721) -- 0:16:06
769000 -- (-48827.202) [-48811.969] (-48825.654) (-48829.168) * (-48804.483) (-48822.150) [-48809.711] (-48829.464) -- 0:16:01
770000 -- (-48825.365) [-48809.759] (-48824.408) (-48810.569) * (-48825.869) (-48808.115) (-48833.448) [-48816.809] -- 0:15:57
Average standard deviation of split frequencies: 0.005537
771000 -- (-48807.129) [-48812.652] (-48826.590) (-48805.508) * (-48819.280) [-48803.250] (-48832.672) (-48827.358) -- 0:15:53
772000 -- (-48810.730) (-48807.686) (-48824.992) [-48809.390] * (-48819.402) (-48814.989) (-48824.460) [-48804.067] -- 0:15:49
773000 -- (-48803.299) (-48812.283) (-48831.779) [-48799.896] * (-48828.467) [-48823.013] (-48812.320) (-48821.612) -- 0:15:45
774000 -- [-48806.013] (-48825.866) (-48840.076) (-48814.159) * (-48800.654) [-48814.087] (-48816.031) (-48813.976) -- 0:15:40
775000 -- (-48815.259) (-48848.489) (-48829.474) [-48813.512] * [-48803.571] (-48848.507) (-48824.194) (-48809.145) -- 0:15:36
Average standard deviation of split frequencies: 0.005755
776000 -- (-48815.528) (-48826.604) (-48824.370) [-48807.009] * (-48819.902) (-48827.464) (-48806.460) [-48804.333] -- 0:15:32
777000 -- (-48825.467) (-48815.271) (-48818.361) [-48800.395] * [-48815.877] (-48810.893) (-48826.466) (-48811.512) -- 0:15:28
778000 -- [-48820.609] (-48822.536) (-48825.784) (-48806.154) * (-48830.766) (-48821.507) (-48820.940) [-48808.742] -- 0:15:24
779000 -- (-48824.690) (-48808.337) (-48850.630) [-48808.281] * (-48835.354) (-48817.705) (-48822.731) [-48814.847] -- 0:15:20
780000 -- (-48833.483) (-48837.475) (-48818.712) [-48821.800] * (-48811.306) (-48818.145) [-48802.153] (-48835.667) -- 0:15:15
Average standard deviation of split frequencies: 0.005800
781000 -- (-48829.283) (-48823.743) (-48840.167) [-48811.600] * [-48810.421] (-48811.838) (-48800.707) (-48825.152) -- 0:15:11
782000 -- (-48815.919) (-48826.941) (-48831.288) [-48814.083] * (-48819.749) [-48815.475] (-48816.050) (-48830.031) -- 0:15:07
783000 -- [-48812.857] (-48814.054) (-48831.894) (-48813.008) * [-48816.740] (-48807.855) (-48813.327) (-48834.243) -- 0:15:03
784000 -- [-48818.277] (-48816.640) (-48820.427) (-48825.013) * (-48808.393) [-48815.114] (-48823.852) (-48838.752) -- 0:14:59
785000 -- (-48816.795) (-48809.138) (-48821.813) [-48809.502] * [-48814.118] (-48811.219) (-48824.052) (-48809.007) -- 0:14:55
Average standard deviation of split frequencies: 0.005934
786000 -- (-48833.519) [-48802.891] (-48822.914) (-48823.857) * (-48809.550) (-48809.429) (-48820.451) [-48817.313] -- 0:14:50
787000 -- (-48812.667) (-48821.100) [-48807.982] (-48821.975) * (-48822.383) (-48819.826) (-48831.218) [-48806.313] -- 0:14:46
788000 -- (-48820.895) (-48808.904) [-48800.469] (-48843.726) * [-48824.245] (-48823.773) (-48826.364) (-48813.639) -- 0:14:42
789000 -- (-48813.281) (-48817.774) [-48807.790] (-48833.991) * (-48827.564) (-48834.194) (-48808.678) [-48811.271] -- 0:14:38
790000 -- [-48814.066] (-48823.146) (-48819.456) (-48833.540) * (-48821.896) (-48836.861) (-48818.360) [-48811.052] -- 0:14:34
Average standard deviation of split frequencies: 0.005837
791000 -- (-48811.313) [-48813.723] (-48809.455) (-48832.986) * [-48816.812] (-48832.458) (-48809.320) (-48819.302) -- 0:14:30
792000 -- (-48817.627) [-48817.584] (-48815.827) (-48833.664) * (-48815.966) (-48829.119) [-48817.160] (-48810.609) -- 0:14:25
793000 -- (-48821.216) [-48817.261] (-48814.008) (-48821.519) * (-48817.982) (-48819.581) (-48822.634) [-48811.896] -- 0:14:21
794000 -- [-48822.428] (-48820.737) (-48805.685) (-48821.778) * (-48815.940) (-48833.995) [-48811.012] (-48847.381) -- 0:14:17
795000 -- (-48827.320) [-48802.159] (-48830.386) (-48807.041) * (-48812.618) (-48810.219) [-48811.781] (-48832.032) -- 0:14:13
Average standard deviation of split frequencies: 0.005673
796000 -- (-48835.406) (-48818.863) (-48828.775) [-48801.734] * [-48804.165] (-48816.517) (-48811.013) (-48810.205) -- 0:14:09
797000 -- [-48816.540] (-48830.939) (-48822.624) (-48814.505) * (-48823.724) (-48826.109) [-48818.870] (-48819.523) -- 0:14:05
798000 -- (-48822.020) [-48815.476] (-48832.048) (-48805.215) * (-48832.852) (-48825.988) [-48801.288] (-48814.648) -- 0:14:00
799000 -- (-48820.395) (-48826.477) (-48841.133) [-48817.459] * (-48831.617) (-48828.353) [-48809.853] (-48815.050) -- 0:13:56
800000 -- (-48810.134) (-48835.654) [-48808.254] (-48830.748) * (-48812.064) (-48809.864) (-48812.301) [-48814.849] -- 0:13:52
Average standard deviation of split frequencies: 0.005779
801000 -- (-48830.902) [-48810.871] (-48834.396) (-48820.491) * [-48813.906] (-48798.828) (-48808.502) (-48822.957) -- 0:13:48
802000 -- (-48810.979) (-48827.238) [-48813.582] (-48829.684) * (-48809.845) [-48801.327] (-48810.123) (-48819.672) -- 0:13:44
803000 -- [-48812.020] (-48822.974) (-48828.057) (-48827.794) * (-48824.593) (-48813.646) [-48805.076] (-48817.134) -- 0:13:40
804000 -- (-48807.200) (-48825.679) (-48813.594) [-48815.710] * [-48800.683] (-48826.283) (-48817.915) (-48817.483) -- 0:13:35
805000 -- (-48825.273) [-48816.547] (-48810.867) (-48826.492) * [-48804.839] (-48813.042) (-48805.525) (-48817.743) -- 0:13:31
Average standard deviation of split frequencies: 0.005618
806000 -- (-48821.325) (-48821.308) (-48835.444) [-48813.271] * [-48809.948] (-48818.124) (-48809.936) (-48832.574) -- 0:13:27
807000 -- (-48817.811) (-48817.628) [-48804.325] (-48819.542) * [-48825.496] (-48808.981) (-48820.015) (-48840.318) -- 0:13:23
808000 -- (-48812.325) (-48820.680) [-48812.464] (-48808.616) * (-48830.281) [-48801.301] (-48829.170) (-48817.358) -- 0:13:19
809000 -- (-48811.992) (-48807.624) (-48826.068) [-48807.519] * (-48834.065) (-48812.650) (-48824.775) [-48810.942] -- 0:13:15
810000 -- (-48807.006) (-48813.820) (-48832.593) [-48821.834] * (-48825.596) [-48804.688] (-48816.151) (-48809.658) -- 0:13:10
Average standard deviation of split frequencies: 0.005463
811000 -- (-48809.139) [-48830.056] (-48809.878) (-48817.095) * (-48805.234) (-48820.796) (-48816.704) [-48817.686] -- 0:13:06
812000 -- [-48822.222] (-48833.880) (-48829.803) (-48823.129) * (-48832.914) (-48820.449) [-48806.625] (-48818.665) -- 0:13:02
813000 -- [-48814.097] (-48817.637) (-48816.303) (-48844.681) * (-48838.776) [-48806.755] (-48811.824) (-48814.446) -- 0:12:58
814000 -- (-48816.373) [-48810.044] (-48817.452) (-48836.304) * (-48829.723) (-48822.177) (-48809.530) [-48815.273] -- 0:12:54
815000 -- (-48811.261) [-48828.550] (-48811.225) (-48828.098) * [-48819.666] (-48819.540) (-48805.226) (-48822.876) -- 0:12:50
Average standard deviation of split frequencies: 0.005412
816000 -- (-48815.951) [-48806.061] (-48826.169) (-48808.008) * (-48818.282) (-48813.642) [-48814.047] (-48825.455) -- 0:12:45
817000 -- (-48821.565) [-48808.833] (-48830.471) (-48805.417) * (-48823.415) (-48820.050) (-48810.746) [-48807.742] -- 0:12:41
818000 -- (-48816.761) [-48798.939] (-48824.423) (-48833.685) * (-48818.967) (-48819.415) [-48817.300] (-48819.795) -- 0:12:37
819000 -- (-48820.774) (-48819.409) [-48814.621] (-48815.010) * (-48821.539) (-48815.971) (-48824.608) [-48819.388] -- 0:12:33
820000 -- (-48830.230) (-48816.612) (-48808.527) [-48815.404] * (-48808.216) (-48828.928) [-48820.604] (-48829.294) -- 0:12:29
Average standard deviation of split frequencies: 0.005079
821000 -- [-48817.000] (-48821.828) (-48825.575) (-48806.094) * [-48801.138] (-48829.221) (-48815.541) (-48828.525) -- 0:12:24
822000 -- (-48820.027) [-48812.925] (-48810.343) (-48830.645) * [-48808.976] (-48840.108) (-48816.317) (-48823.301) -- 0:12:21
823000 -- (-48827.984) [-48820.197] (-48819.490) (-48811.890) * [-48811.584] (-48822.819) (-48828.949) (-48833.853) -- 0:12:16
824000 -- (-48810.573) (-48831.040) (-48820.273) [-48814.638] * (-48817.305) (-48822.718) [-48823.909] (-48827.783) -- 0:12:12
825000 -- (-48797.194) (-48813.836) (-48824.017) [-48813.833] * [-48809.321] (-48824.858) (-48835.774) (-48814.215) -- 0:12:08
Average standard deviation of split frequencies: 0.005016
826000 -- (-48819.085) (-48811.368) (-48828.561) [-48810.433] * [-48810.046] (-48827.215) (-48831.354) (-48813.230) -- 0:12:04
827000 -- (-48820.344) (-48821.430) [-48806.208] (-48807.514) * [-48807.866] (-48825.744) (-48825.981) (-48810.530) -- 0:12:00
828000 -- [-48812.241] (-48818.551) (-48804.250) (-48849.225) * (-48822.124) (-48832.789) (-48837.775) [-48799.844] -- 0:11:55
829000 -- (-48805.479) [-48802.253] (-48832.100) (-48825.795) * (-48825.246) (-48827.527) (-48803.417) [-48805.131] -- 0:11:51
830000 -- (-48818.214) [-48804.620] (-48819.121) (-48823.594) * (-48819.667) (-48821.379) (-48821.738) [-48812.044] -- 0:11:47
Average standard deviation of split frequencies: 0.004689
831000 -- (-48811.168) [-48813.992] (-48835.080) (-48826.207) * (-48820.459) (-48823.566) (-48827.899) [-48800.021] -- 0:11:43
832000 -- [-48802.693] (-48839.019) (-48837.271) (-48822.808) * (-48808.025) (-48812.544) [-48807.899] (-48818.543) -- 0:11:39
833000 -- (-48825.998) [-48823.449] (-48826.246) (-48807.967) * (-48821.736) (-48818.493) (-48812.985) [-48820.093] -- 0:11:35
834000 -- (-48818.711) (-48830.131) (-48817.446) [-48803.588] * [-48814.935] (-48811.904) (-48804.850) (-48812.366) -- 0:11:31
835000 -- [-48814.739] (-48825.086) (-48801.443) (-48814.647) * [-48820.052] (-48816.174) (-48828.361) (-48823.312) -- 0:11:26
Average standard deviation of split frequencies: 0.004704
836000 -- [-48811.322] (-48827.113) (-48808.455) (-48843.821) * (-48807.728) (-48826.444) (-48832.590) [-48812.706] -- 0:11:22
837000 -- (-48825.737) (-48821.734) [-48822.481] (-48824.927) * (-48834.438) [-48821.011] (-48833.448) (-48827.202) -- 0:11:18
838000 -- [-48811.991] (-48833.044) (-48818.294) (-48807.771) * (-48819.106) (-48828.049) (-48814.629) [-48811.757] -- 0:11:14
839000 -- (-48818.464) [-48799.539] (-48815.565) (-48810.434) * (-48805.158) (-48828.263) (-48808.199) [-48810.441] -- 0:11:10
840000 -- (-48815.250) (-48827.096) [-48811.843] (-48816.201) * (-48811.756) (-48829.772) (-48815.038) [-48803.504] -- 0:11:06
Average standard deviation of split frequencies: 0.004530
841000 -- (-48818.222) (-48822.787) (-48822.948) [-48810.916] * [-48805.860] (-48819.359) (-48818.435) (-48801.104) -- 0:11:01
842000 -- (-48821.466) (-48812.960) (-48823.504) [-48806.249] * [-48807.694] (-48822.560) (-48806.001) (-48804.959) -- 0:10:57
843000 -- (-48813.549) (-48824.567) [-48834.643] (-48816.179) * [-48802.370] (-48821.396) (-48820.066) (-48808.338) -- 0:10:53
844000 -- [-48815.105] (-48829.343) (-48817.984) (-48813.936) * (-48809.069) [-48796.025] (-48814.772) (-48824.241) -- 0:10:49
845000 -- (-48830.937) (-48815.720) [-48809.118] (-48839.498) * [-48814.819] (-48828.722) (-48816.599) (-48826.824) -- 0:10:45
Average standard deviation of split frequencies: 0.004252
846000 -- (-48835.812) [-48818.742] (-48813.110) (-48813.005) * [-48809.634] (-48808.298) (-48812.992) (-48815.580) -- 0:10:41
847000 -- (-48812.943) (-48808.584) [-48807.326] (-48816.223) * [-48802.677] (-48811.717) (-48817.850) (-48826.879) -- 0:10:36
848000 -- (-48824.833) [-48823.268] (-48821.929) (-48834.718) * [-48804.597] (-48818.581) (-48822.420) (-48818.554) -- 0:10:32
849000 -- (-48815.345) [-48815.675] (-48823.625) (-48806.709) * (-48822.787) (-48822.496) (-48828.105) [-48812.447] -- 0:10:28
850000 -- (-48832.195) (-48825.219) [-48820.852] (-48813.478) * (-48814.166) (-48826.958) (-48831.452) [-48808.997] -- 0:10:24
Average standard deviation of split frequencies: 0.004083
851000 -- [-48809.956] (-48834.065) (-48810.467) (-48820.342) * (-48829.968) (-48827.823) [-48814.978] (-48812.866) -- 0:10:20
852000 -- (-48799.822) (-48811.875) [-48800.353] (-48814.687) * (-48819.753) (-48827.112) (-48818.703) [-48823.677] -- 0:10:16
853000 -- (-48808.092) [-48822.882] (-48824.045) (-48809.048) * (-48816.138) (-48827.162) [-48822.733] (-48828.714) -- 0:10:12
854000 -- [-48805.844] (-48818.350) (-48821.466) (-48812.000) * (-48842.553) (-48830.694) (-48821.196) [-48822.389] -- 0:10:07
855000 -- (-48814.889) (-48801.183) (-48833.031) [-48809.589] * (-48820.469) (-48818.735) (-48819.749) [-48825.337] -- 0:10:03
Average standard deviation of split frequencies: 0.004000
856000 -- (-48804.295) [-48810.646] (-48834.672) (-48824.026) * [-48824.752] (-48819.934) (-48819.200) (-48815.579) -- 0:09:59
857000 -- [-48812.853] (-48820.320) (-48838.418) (-48831.281) * (-48837.539) (-48816.822) [-48827.368] (-48815.268) -- 0:09:55
858000 -- [-48820.908] (-48808.921) (-48832.279) (-48824.523) * (-48811.923) [-48806.661] (-48825.412) (-48821.436) -- 0:09:51
859000 -- (-48812.628) [-48820.959] (-48825.880) (-48821.620) * (-48817.002) [-48803.661] (-48832.225) (-48816.559) -- 0:09:47
860000 -- [-48819.277] (-48823.470) (-48816.219) (-48823.087) * (-48818.587) [-48809.044] (-48829.960) (-48808.438) -- 0:09:42
Average standard deviation of split frequencies: 0.003791
861000 -- (-48824.081) (-48827.916) [-48808.197] (-48826.390) * (-48821.671) (-48817.090) (-48808.297) [-48812.128] -- 0:09:38
862000 -- (-48816.794) (-48830.677) [-48813.970] (-48823.102) * (-48815.047) (-48833.241) (-48822.192) [-48807.188] -- 0:09:34
863000 -- (-48818.690) [-48808.351] (-48821.683) (-48828.583) * [-48804.490] (-48815.331) (-48813.879) (-48811.588) -- 0:09:30
864000 -- (-48810.171) [-48820.944] (-48819.813) (-48817.861) * [-48809.244] (-48804.606) (-48828.795) (-48815.664) -- 0:09:26
865000 -- (-48813.170) (-48820.608) (-48818.889) [-48809.007] * (-48816.863) (-48805.345) (-48820.291) [-48806.016] -- 0:09:22
Average standard deviation of split frequencies: 0.003997
866000 -- (-48817.318) (-48816.416) (-48807.744) [-48805.675] * (-48818.334) (-48823.562) (-48823.253) [-48816.959] -- 0:09:18
867000 -- (-48810.603) [-48822.324] (-48810.158) (-48825.638) * (-48810.668) [-48815.710] (-48833.287) (-48805.744) -- 0:09:13
868000 -- [-48812.025] (-48817.437) (-48821.035) (-48811.277) * [-48806.196] (-48828.247) (-48813.026) (-48819.988) -- 0:09:09
869000 -- (-48821.584) [-48810.212] (-48821.393) (-48814.163) * [-48811.916] (-48823.798) (-48825.231) (-48818.686) -- 0:09:05
870000 -- (-48815.342) (-48818.331) [-48808.982] (-48824.806) * (-48809.635) (-48819.167) (-48813.970) [-48810.257] -- 0:09:01
Average standard deviation of split frequencies: 0.004089
871000 -- (-48827.253) (-48820.770) [-48811.117] (-48818.880) * [-48824.832] (-48828.367) (-48814.559) (-48817.351) -- 0:08:57
872000 -- (-48815.725) (-48815.768) [-48823.547] (-48824.160) * (-48816.084) (-48817.199) [-48812.668] (-48806.800) -- 0:08:53
873000 -- [-48818.605] (-48820.546) (-48819.698) (-48808.694) * (-48815.217) (-48815.789) (-48801.190) [-48810.571] -- 0:08:48
874000 -- (-48822.994) (-48810.675) [-48801.642] (-48824.099) * (-48810.155) (-48818.792) (-48817.010) [-48806.702] -- 0:08:44
875000 -- (-48813.355) [-48809.021] (-48810.117) (-48814.872) * [-48795.122] (-48820.805) (-48812.344) (-48823.440) -- 0:08:40
Average standard deviation of split frequencies: 0.004008
876000 -- (-48845.486) (-48822.842) (-48824.301) [-48804.867] * [-48810.171] (-48812.795) (-48821.547) (-48833.773) -- 0:08:36
877000 -- (-48817.366) [-48816.043] (-48808.249) (-48820.242) * (-48815.894) [-48801.194] (-48818.244) (-48829.825) -- 0:08:32
878000 -- (-48829.196) (-48817.884) (-48817.386) [-48800.231] * (-48822.094) [-48797.529] (-48816.955) (-48811.615) -- 0:08:28
879000 -- (-48809.045) (-48818.601) [-48804.481] (-48821.363) * (-48825.947) (-48805.660) (-48813.714) [-48809.905] -- 0:08:23
880000 -- [-48818.099] (-48807.081) (-48833.054) (-48809.427) * (-48815.766) (-48825.851) [-48804.543] (-48833.333) -- 0:08:19
Average standard deviation of split frequencies: 0.004085
881000 -- (-48822.862) (-48809.154) [-48802.606] (-48807.203) * (-48816.379) [-48808.651] (-48809.208) (-48824.172) -- 0:08:15
882000 -- (-48809.984) (-48812.112) (-48804.161) [-48810.264] * (-48811.355) (-48815.010) [-48808.204] (-48827.498) -- 0:08:11
883000 -- (-48813.982) (-48813.069) [-48804.069] (-48824.883) * (-48811.127) (-48829.661) (-48833.328) [-48803.774] -- 0:08:07
884000 -- (-48807.535) (-48817.987) [-48812.187] (-48818.269) * (-48820.502) (-48813.311) [-48816.482] (-48824.308) -- 0:08:03
885000 -- (-48807.470) (-48838.336) (-48826.754) [-48805.329] * [-48820.188] (-48813.763) (-48826.887) (-48829.038) -- 0:07:59
Average standard deviation of split frequencies: 0.004004
886000 -- (-48817.865) (-48810.676) (-48809.527) [-48803.857] * [-48825.507] (-48823.423) (-48822.360) (-48823.081) -- 0:07:54
887000 -- [-48803.688] (-48826.785) (-48814.760) (-48809.750) * (-48814.207) (-48831.492) [-48808.968] (-48814.854) -- 0:07:50
888000 -- [-48810.424] (-48821.506) (-48815.970) (-48804.552) * (-48815.737) (-48842.869) [-48809.221] (-48818.400) -- 0:07:46
889000 -- [-48825.156] (-48818.386) (-48810.796) (-48809.790) * [-48803.008] (-48859.706) (-48823.243) (-48823.266) -- 0:07:42
890000 -- (-48817.039) [-48809.818] (-48815.175) (-48822.350) * (-48817.714) (-48813.576) [-48816.308] (-48814.993) -- 0:07:38
Average standard deviation of split frequencies: 0.004025
891000 -- (-48807.272) (-48833.139) (-48817.002) [-48811.146] * (-48817.424) [-48808.985] (-48805.802) (-48808.649) -- 0:07:34
892000 -- (-48825.264) (-48834.172) [-48818.485] (-48817.629) * (-48830.378) (-48821.887) (-48820.022) [-48808.866] -- 0:07:29
893000 -- (-48825.619) (-48819.256) [-48809.099] (-48837.866) * [-48812.332] (-48851.899) (-48808.497) (-48808.434) -- 0:07:25
894000 -- (-48812.981) [-48811.487] (-48832.287) (-48832.935) * [-48810.368] (-48813.938) (-48814.282) (-48821.854) -- 0:07:21
895000 -- (-48828.988) (-48825.805) (-48817.208) [-48807.512] * (-48802.231) [-48804.747] (-48835.378) (-48820.938) -- 0:07:17
Average standard deviation of split frequencies: 0.004084
896000 -- (-48829.127) (-48814.650) [-48804.171] (-48819.374) * (-48811.438) [-48803.674] (-48833.078) (-48807.511) -- 0:07:13
897000 -- (-48814.409) (-48831.535) [-48803.150] (-48825.940) * (-48826.371) [-48808.569] (-48818.937) (-48815.686) -- 0:07:09
898000 -- (-48818.420) (-48832.596) [-48805.794] (-48824.107) * [-48811.251] (-48807.656) (-48843.068) (-48808.637) -- 0:07:04
899000 -- (-48820.775) (-48823.614) [-48807.353] (-48817.821) * (-48811.038) (-48817.479) (-48834.303) [-48809.121] -- 0:07:00
900000 -- [-48817.206] (-48836.514) (-48810.160) (-48819.086) * [-48814.269] (-48830.089) (-48810.649) (-48817.557) -- 0:06:56
Average standard deviation of split frequencies: 0.004132
901000 -- (-48804.045) (-48823.643) [-48802.659] (-48817.129) * [-48807.034] (-48823.993) (-48818.319) (-48810.872) -- 0:06:52
902000 -- (-48808.627) (-48830.543) (-48812.887) [-48822.472] * [-48805.685] (-48816.217) (-48834.944) (-48815.962) -- 0:06:48
903000 -- [-48806.222] (-48818.817) (-48816.271) (-48823.265) * [-48820.295] (-48823.194) (-48843.097) (-48829.642) -- 0:06:44
904000 -- [-48805.902] (-48820.968) (-48819.403) (-48817.620) * (-48817.913) (-48832.710) (-48823.829) [-48811.086] -- 0:06:39
905000 -- [-48807.374] (-48825.699) (-48823.660) (-48842.177) * [-48808.170] (-48806.893) (-48827.969) (-48807.494) -- 0:06:35
Average standard deviation of split frequencies: 0.004204
906000 -- [-48802.803] (-48811.642) (-48817.860) (-48823.850) * (-48809.372) (-48818.295) (-48819.455) [-48815.774] -- 0:06:31
907000 -- (-48824.743) (-48808.201) [-48812.579] (-48806.286) * [-48809.345] (-48814.878) (-48810.508) (-48817.284) -- 0:06:27
908000 -- (-48819.802) [-48813.803] (-48832.598) (-48829.432) * (-48805.035) (-48825.065) [-48812.125] (-48823.866) -- 0:06:23
909000 -- (-48809.250) (-48826.032) (-48835.220) [-48806.354] * [-48813.071] (-48824.146) (-48801.366) (-48822.219) -- 0:06:19
910000 -- (-48827.153) [-48813.138] (-48829.624) (-48833.451) * (-48815.473) (-48835.343) (-48819.529) [-48811.948] -- 0:06:14
Average standard deviation of split frequencies: 0.004182
911000 -- (-48816.039) [-48803.892] (-48824.678) (-48851.640) * (-48827.706) [-48805.198] (-48813.314) (-48815.139) -- 0:06:10
912000 -- (-48829.834) [-48803.049] (-48816.815) (-48826.730) * (-48811.328) [-48822.106] (-48804.463) (-48819.541) -- 0:06:06
913000 -- (-48831.978) (-48823.057) [-48815.303] (-48817.024) * [-48812.110] (-48829.070) (-48822.504) (-48817.451) -- 0:06:02
914000 -- (-48817.014) [-48810.310] (-48817.311) (-48819.082) * (-48819.912) (-48824.300) (-48815.765) [-48814.318] -- 0:05:58
915000 -- (-48828.409) (-48808.332) (-48838.005) [-48807.716] * (-48820.648) (-48807.900) [-48805.965] (-48817.466) -- 0:05:54
Average standard deviation of split frequencies: 0.004212
916000 -- (-48826.779) [-48809.280] (-48822.820) (-48831.226) * (-48826.225) (-48825.637) [-48810.558] (-48831.208) -- 0:05:50
917000 -- (-48830.007) (-48808.819) [-48808.041] (-48825.427) * (-48809.835) [-48822.634] (-48810.806) (-48806.055) -- 0:05:45
918000 -- (-48817.251) (-48798.574) [-48818.072] (-48821.537) * (-48829.337) (-48827.822) (-48825.515) [-48822.713] -- 0:05:41
919000 -- (-48828.864) (-48805.450) [-48798.149] (-48819.893) * [-48826.057] (-48834.772) (-48815.393) (-48816.831) -- 0:05:37
920000 -- [-48812.736] (-48814.046) (-48828.060) (-48811.699) * [-48814.215] (-48822.381) (-48832.696) (-48817.181) -- 0:05:33
Average standard deviation of split frequencies: 0.004015
921000 -- (-48804.830) [-48799.402] (-48828.191) (-48830.866) * (-48822.782) (-48824.920) [-48809.872] (-48815.109) -- 0:05:29
922000 -- (-48813.146) [-48806.936] (-48811.985) (-48821.216) * (-48824.282) (-48825.858) (-48811.968) [-48819.673] -- 0:05:25
923000 -- (-48844.752) [-48814.935] (-48820.367) (-48815.560) * (-48836.578) (-48807.034) [-48823.819] (-48820.408) -- 0:05:20
924000 -- (-48838.805) (-48813.803) (-48822.791) [-48813.289] * [-48817.857] (-48808.233) (-48832.836) (-48809.623) -- 0:05:16
925000 -- (-48823.200) [-48814.720] (-48818.498) (-48819.794) * (-48818.168) [-48804.052] (-48819.138) (-48810.974) -- 0:05:12
Average standard deviation of split frequencies: 0.003738
926000 -- (-48819.540) (-48814.804) [-48808.686] (-48814.047) * (-48825.312) (-48816.545) (-48819.397) [-48817.743] -- 0:05:08
927000 -- (-48810.902) (-48828.640) [-48799.412] (-48821.463) * (-48821.798) (-48813.424) (-48813.560) [-48809.860] -- 0:05:04
928000 -- (-48832.823) (-48812.828) [-48814.939] (-48824.291) * (-48822.660) (-48815.953) (-48807.283) [-48803.023] -- 0:05:00
929000 -- (-48811.990) [-48809.481] (-48805.288) (-48823.118) * [-48807.821] (-48824.970) (-48822.300) (-48807.191) -- 0:04:55
930000 -- [-48809.744] (-48809.435) (-48811.503) (-48833.133) * (-48821.950) [-48818.170] (-48815.991) (-48814.020) -- 0:04:51
Average standard deviation of split frequencies: 0.003732
931000 -- [-48819.407] (-48816.123) (-48819.453) (-48831.185) * [-48814.070] (-48816.586) (-48818.481) (-48818.741) -- 0:04:47
932000 -- (-48820.518) [-48814.808] (-48834.519) (-48822.734) * [-48810.111] (-48818.112) (-48814.990) (-48837.232) -- 0:04:43
933000 -- (-48813.750) [-48807.503] (-48812.225) (-48822.329) * (-48819.700) (-48811.787) [-48815.486] (-48826.195) -- 0:04:39
934000 -- (-48831.531) (-48824.171) (-48818.639) [-48806.943] * (-48815.122) (-48814.123) [-48810.556] (-48826.400) -- 0:04:35
935000 -- (-48838.012) (-48807.349) [-48817.517] (-48827.331) * (-48824.230) [-48809.646] (-48804.070) (-48840.625) -- 0:04:30
Average standard deviation of split frequencies: 0.003830
936000 -- (-48817.503) [-48810.925] (-48810.212) (-48826.969) * (-48816.405) [-48811.354] (-48814.352) (-48827.330) -- 0:04:26
937000 -- [-48811.491] (-48816.267) (-48824.154) (-48824.425) * [-48817.717] (-48816.484) (-48807.049) (-48824.596) -- 0:04:22
938000 -- (-48827.633) [-48823.574] (-48840.105) (-48831.203) * (-48819.422) (-48811.876) [-48804.051] (-48817.905) -- 0:04:18
939000 -- (-48812.888) (-48830.914) (-48817.190) [-48820.844] * (-48823.974) (-48812.089) (-48816.968) [-48820.768] -- 0:04:14
940000 -- (-48827.803) (-48851.528) [-48816.045] (-48822.415) * (-48832.063) [-48806.725] (-48820.816) (-48819.764) -- 0:04:10
Average standard deviation of split frequencies: 0.003482
941000 -- (-48822.168) (-48818.320) [-48808.808] (-48813.887) * (-48816.540) [-48811.682] (-48817.806) (-48832.355) -- 0:04:05
942000 -- (-48834.160) [-48823.906] (-48826.458) (-48818.081) * (-48818.607) (-48814.085) (-48807.307) [-48820.064] -- 0:04:01
943000 -- [-48809.565] (-48816.477) (-48816.755) (-48813.678) * [-48809.872] (-48817.131) (-48824.441) (-48822.028) -- 0:03:57
944000 -- (-48810.114) [-48810.616] (-48817.698) (-48829.683) * [-48820.250] (-48819.109) (-48833.412) (-48816.288) -- 0:03:53
945000 -- (-48834.621) [-48797.473] (-48821.833) (-48807.858) * [-48814.514] (-48834.330) (-48827.097) (-48817.827) -- 0:03:49
Average standard deviation of split frequencies: 0.003305
946000 -- [-48818.165] (-48813.770) (-48801.778) (-48805.846) * [-48809.038] (-48829.051) (-48823.369) (-48819.680) -- 0:03:45
947000 -- (-48818.791) (-48828.655) (-48808.621) [-48800.802] * [-48813.774] (-48823.876) (-48821.128) (-48826.548) -- 0:03:40
948000 -- (-48804.402) (-48820.995) (-48827.440) [-48813.011] * (-48813.358) (-48824.721) [-48805.841] (-48821.965) -- 0:03:36
949000 -- [-48816.363] (-48805.838) (-48823.973) (-48822.477) * (-48825.401) (-48808.928) (-48805.357) [-48815.115] -- 0:03:32
950000 -- (-48804.765) [-48806.459] (-48816.717) (-48831.165) * [-48811.063] (-48824.287) (-48802.301) (-48803.533) -- 0:03:28
Average standard deviation of split frequencies: 0.003301
951000 -- (-48820.240) [-48816.998] (-48809.986) (-48825.144) * [-48803.816] (-48827.192) (-48830.535) (-48801.638) -- 0:03:24
952000 -- (-48809.098) (-48817.015) [-48812.872] (-48840.580) * [-48802.478] (-48815.692) (-48823.382) (-48824.126) -- 0:03:20
953000 -- (-48831.247) (-48820.325) [-48824.157] (-48814.894) * (-48820.821) (-48828.166) [-48808.501] (-48817.669) -- 0:03:15
954000 -- [-48809.785] (-48826.719) (-48834.143) (-48804.502) * (-48825.025) (-48850.603) [-48803.708] (-48812.726) -- 0:03:11
955000 -- [-48807.945] (-48808.886) (-48813.903) (-48835.906) * (-48833.434) (-48823.119) (-48814.707) [-48806.992] -- 0:03:07
Average standard deviation of split frequencies: 0.003335
956000 -- (-48809.132) (-48821.677) [-48804.892] (-48817.756) * (-48804.143) (-48825.099) (-48824.328) [-48830.524] -- 0:03:03
957000 -- (-48825.442) (-48815.992) [-48818.280] (-48819.088) * (-48821.871) (-48826.575) (-48804.399) [-48808.402] -- 0:02:59
958000 -- (-48812.120) (-48838.172) (-48812.669) [-48802.911] * (-48832.812) (-48831.122) [-48811.459] (-48812.400) -- 0:02:55
959000 -- (-48818.484) (-48819.901) (-48818.789) [-48810.716] * [-48812.516] (-48821.601) (-48823.838) (-48820.854) -- 0:02:50
960000 -- (-48825.894) (-48824.514) [-48821.817] (-48830.057) * (-48817.990) (-48824.496) (-48816.735) [-48806.328] -- 0:02:46
Average standard deviation of split frequencies: 0.003215
961000 -- (-48816.268) [-48817.808] (-48822.571) (-48817.103) * [-48811.737] (-48811.323) (-48821.155) (-48818.378) -- 0:02:42
962000 -- (-48821.883) (-48820.178) [-48808.200] (-48825.064) * (-48814.298) (-48837.596) (-48836.173) [-48818.038] -- 0:02:38
963000 -- (-48811.106) [-48803.039] (-48812.838) (-48824.341) * [-48817.087] (-48822.801) (-48837.494) (-48819.415) -- 0:02:34
964000 -- (-48826.967) [-48806.803] (-48802.993) (-48817.703) * (-48826.456) (-48825.020) (-48822.172) [-48806.634] -- 0:02:30
965000 -- (-48819.103) (-48833.066) [-48804.353] (-48812.491) * (-48813.111) (-48824.676) (-48828.444) [-48808.507] -- 0:02:25
Average standard deviation of split frequencies: 0.003133
966000 -- (-48815.094) (-48828.185) [-48816.070] (-48818.283) * (-48802.811) (-48811.576) (-48836.829) [-48803.027] -- 0:02:21
967000 -- (-48806.921) (-48831.886) [-48813.298] (-48826.489) * (-48824.542) (-48822.678) (-48833.914) [-48805.220] -- 0:02:17
968000 -- (-48805.233) (-48828.667) [-48806.690] (-48814.000) * (-48835.331) (-48824.963) [-48828.739] (-48824.398) -- 0:02:13
969000 -- (-48809.129) (-48827.082) [-48803.776] (-48828.802) * (-48812.119) (-48831.034) [-48826.869] (-48824.302) -- 0:02:09
970000 -- (-48814.313) [-48812.363] (-48811.794) (-48813.918) * (-48830.740) (-48816.529) (-48822.009) [-48809.053] -- 0:02:05
Average standard deviation of split frequencies: 0.003221
971000 -- (-48811.299) (-48813.339) (-48812.135) [-48817.200] * [-48822.922] (-48830.782) (-48822.486) (-48816.915) -- 0:02:00
972000 -- [-48821.900] (-48813.985) (-48821.263) (-48830.693) * (-48833.707) (-48829.380) [-48813.594] (-48816.752) -- 0:01:56
973000 -- (-48813.097) (-48815.879) (-48803.292) [-48810.503] * [-48820.673] (-48814.286) (-48815.866) (-48813.824) -- 0:01:52
974000 -- (-48817.259) (-48810.315) (-48817.176) [-48817.156] * (-48808.580) (-48816.007) (-48823.906) [-48801.785] -- 0:01:48
975000 -- (-48810.209) [-48813.236] (-48841.227) (-48820.273) * [-48814.013] (-48829.038) (-48823.010) (-48824.906) -- 0:01:44
Average standard deviation of split frequencies: 0.003356
976000 -- [-48809.396] (-48806.989) (-48827.958) (-48815.442) * (-48822.958) [-48812.915] (-48827.085) (-48838.010) -- 0:01:40
977000 -- (-48809.680) (-48807.147) (-48815.312) [-48807.705] * (-48862.420) [-48814.866] (-48810.965) (-48834.316) -- 0:01:35
978000 -- (-48806.316) (-48826.029) [-48796.940] (-48807.924) * (-48823.309) [-48824.121] (-48809.079) (-48827.698) -- 0:01:31
979000 -- (-48813.286) (-48831.583) [-48799.186] (-48814.882) * (-48817.246) (-48815.178) [-48819.739] (-48819.920) -- 0:01:27
980000 -- (-48815.236) [-48816.820] (-48833.349) (-48814.757) * [-48822.535] (-48819.070) (-48822.437) (-48826.577) -- 0:01:23
Average standard deviation of split frequencies: 0.003352
981000 -- (-48829.169) (-48804.330) [-48803.475] (-48813.901) * (-48814.989) (-48825.066) (-48820.554) [-48820.365] -- 0:01:19
982000 -- (-48825.430) (-48818.150) [-48809.264] (-48809.258) * (-48814.987) [-48817.108] (-48830.557) (-48812.447) -- 0:01:15
983000 -- [-48816.311] (-48815.562) (-48813.046) (-48815.035) * (-48827.270) (-48810.421) (-48822.566) [-48802.935] -- 0:01:10
984000 -- [-48818.244] (-48821.943) (-48808.892) (-48815.426) * (-48820.576) [-48810.696] (-48834.221) (-48806.124) -- 0:01:06
985000 -- (-48828.014) (-48818.248) (-48809.534) [-48812.323] * [-48799.761] (-48815.861) (-48821.696) (-48801.272) -- 0:01:02
Average standard deviation of split frequencies: 0.003196
986000 -- (-48815.775) (-48821.776) [-48818.700] (-48820.602) * (-48804.633) (-48818.177) (-48829.183) [-48819.138] -- 0:00:58
987000 -- (-48820.178) (-48820.853) (-48824.948) [-48813.363] * [-48807.135] (-48822.636) (-48833.555) (-48826.782) -- 0:00:54
988000 -- (-48828.747) [-48809.692] (-48817.991) (-48818.516) * (-48816.561) (-48820.942) [-48813.738] (-48821.363) -- 0:00:50
989000 -- (-48829.453) (-48828.346) (-48834.445) [-48808.726] * (-48834.571) (-48821.630) [-48807.645] (-48806.063) -- 0:00:45
990000 -- (-48825.262) (-48820.338) [-48808.495] (-48808.865) * (-48830.254) (-48827.017) [-48804.281] (-48808.464) -- 0:00:41
Average standard deviation of split frequencies: 0.003406
991000 -- [-48811.667] (-48821.349) (-48819.616) (-48818.822) * (-48829.641) (-48811.043) [-48810.309] (-48814.444) -- 0:00:37
992000 -- [-48813.252] (-48827.016) (-48825.325) (-48811.350) * (-48809.773) (-48815.665) (-48840.973) [-48813.807] -- 0:00:33
993000 -- [-48819.076] (-48832.700) (-48825.085) (-48814.529) * (-48826.040) (-48818.167) (-48823.590) [-48803.039] -- 0:00:29
994000 -- (-48810.228) (-48820.917) (-48840.001) [-48804.561] * (-48808.015) (-48816.268) (-48838.558) [-48805.623] -- 0:00:25
995000 -- [-48819.842] (-48818.585) (-48824.038) (-48825.436) * [-48803.572] (-48812.587) (-48825.401) (-48809.392) -- 0:00:20
Average standard deviation of split frequencies: 0.003301
996000 -- [-48805.349] (-48829.972) (-48825.873) (-48816.141) * [-48813.632] (-48814.595) (-48832.425) (-48828.247) -- 0:00:16
997000 -- [-48806.223] (-48807.647) (-48812.681) (-48818.527) * [-48808.801] (-48821.487) (-48813.112) (-48814.508) -- 0:00:12
998000 -- (-48807.426) [-48813.894] (-48811.595) (-48840.673) * [-48798.956] (-48821.621) (-48808.090) (-48806.221) -- 0:00:08
999000 -- [-48810.143] (-48809.701) (-48820.263) (-48814.626) * (-48812.378) (-48821.195) (-48811.456) [-48816.029] -- 0:00:04
1000000 -- (-48810.254) (-48815.811) [-48800.363] (-48829.184) * (-48812.561) (-48836.408) (-48805.579) [-48810.432] -- 0:00:00
Average standard deviation of split frequencies: 0.003186
Analysis completed in 1 hours 9 mins 29 seconds
Analysis used 4164.86 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -48787.99
Likelihood of best state for "cold" chain of run 2 was -48790.29
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
12.5 % ( 17 %) Dirichlet(Revmat{all})
30.1 % ( 25 %) Slider(Revmat{all})
1.3 % ( 3 %) Dirichlet(Pi{all})
11.3 % ( 19 %) Slider(Pi{all})
23.4 % ( 22 %) Multiplier(Alpha{1,2})
35.6 % ( 24 %) Multiplier(Alpha{3})
26.3 % ( 22 %) Slider(Pinvar{all})
12.8 % ( 12 %) ExtSPR(Tau{all},V{all})
5.8 % ( 8 %) ExtTBR(Tau{all},V{all})
14.4 % ( 20 %) NNI(Tau{all},V{all})
13.9 % ( 9 %) ParsSPR(Tau{all},V{all})
26.3 % ( 25 %) Multiplier(V{all})
28.5 % ( 34 %) Nodeslider(V{all})
22.1 % ( 29 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
12.1 % ( 23 %) Dirichlet(Revmat{all})
29.8 % ( 34 %) Slider(Revmat{all})
1.0 % ( 1 %) Dirichlet(Pi{all})
11.7 % ( 14 %) Slider(Pi{all})
22.7 % ( 24 %) Multiplier(Alpha{1,2})
36.0 % ( 26 %) Multiplier(Alpha{3})
26.5 % ( 22 %) Slider(Pinvar{all})
12.8 % ( 15 %) ExtSPR(Tau{all},V{all})
5.8 % ( 4 %) ExtTBR(Tau{all},V{all})
14.5 % ( 14 %) NNI(Tau{all},V{all})
13.9 % ( 16 %) ParsSPR(Tau{all},V{all})
26.4 % ( 24 %) Multiplier(V{all})
28.3 % ( 16 %) Nodeslider(V{all})
21.9 % ( 31 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.65 0.40 0.22
2 | 166470 0.68 0.43
3 | 166601 166590 0.69
4 | 166748 167411 166180
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.66 0.40 0.23
2 | 166647 0.68 0.44
3 | 166519 166255 0.70
4 | 166648 166947 166984
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -48806.09
| 2 |
| 1 |
| 2 |
| 2 1 2 2|
| 2 22 1 1 1 2 2 |
|1 1 1 1 1 2 21 1 2 1 2 1 1 1 1 |
| 1 21 2 22 2 2 1 2* 22 2 |
| 1 1 1 1 1 21 1 2 1 2 2 21 * 1 2 11 1|
|22 2* 2 12 1 1 2 1 * 1 |
| 1 2 2 2 1 2 * * 2 |
| 2 2 2 21 1 1 2 |
| 1 1 1 1 1 1 2 1 2 |
| 2 1 2 2 1 |
| 2 21 2 |
| 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -48816.21
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -48798.41 -48828.19
2 -48799.89 -48828.30
--------------------------------------
TOTAL -48798.90 -48828.25
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.150113 0.001782 1.077035 1.242374 1.147970 658.09 798.59 1.000
r(A<->C){all} 0.046100 0.000026 0.036612 0.056353 0.045987 771.60 820.79 1.000
r(A<->G){all} 0.277076 0.000139 0.253491 0.298801 0.277080 515.87 594.21 1.003
r(A<->T){all} 0.058201 0.000015 0.050573 0.066300 0.058148 578.33 830.88 1.000
r(C<->G){all} 0.005262 0.000006 0.000897 0.010204 0.004995 568.29 664.79 1.000
r(C<->T){all} 0.567066 0.000179 0.540944 0.593338 0.566999 462.08 557.04 1.002
r(G<->T){all} 0.046295 0.000013 0.039264 0.053050 0.046373 811.87 821.87 1.000
pi(A){all} 0.291636 0.000008 0.286184 0.297269 0.291608 516.51 641.60 1.001
pi(C){all} 0.164542 0.000005 0.160415 0.169634 0.164602 714.75 724.48 1.000
pi(G){all} 0.208691 0.000007 0.203547 0.214083 0.208700 382.97 438.27 1.000
pi(T){all} 0.335132 0.000008 0.329039 0.340444 0.335276 590.22 604.63 1.000
alpha{1,2} 0.096757 0.000016 0.089196 0.104557 0.096768 1166.05 1187.49 1.000
alpha{3} 13.948576 7.232486 9.220163 19.297170 13.694720 1212.90 1296.09 1.000
pinvar{all} 0.382004 0.000131 0.359993 0.404040 0.382241 1220.78 1231.55 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C10
2 -- C11
3 -- C13
4 -- C14
5 -- C18
6 -- C19
7 -- C2
8 -- C20
9 -- C21
10 -- C26
11 -- C3
12 -- C31
13 -- C32
14 -- C35
15 -- C36
16 -- C37
17 -- C38
18 -- C4
19 -- C40
20 -- C45
21 -- C47
22 -- C48
23 -- C49
24 -- C5
25 -- C50
26 -- C52
27 -- C6
28 -- C7
29 -- C8
30 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
------------------------------------
1 -- .*****************************
2 -- .*............................
3 -- ..*...........................
4 -- ...*..........................
5 -- ....*.........................
6 -- .....*........................
7 -- ......*.......................
8 -- .......*......................
9 -- ........*.....................
10 -- .........*....................
11 -- ..........*...................
12 -- ...........*..................
13 -- ............*.................
14 -- .............*................
15 -- ..............*...............
16 -- ...............*..............
17 -- ................*.............
18 -- .................*............
19 -- ..................*...........
20 -- ...................*..........
21 -- ....................*.........
22 -- .....................*........
23 -- ......................*.......
24 -- .......................*......
25 -- ........................*.....
26 -- .........................*....
27 -- ..........................*...
28 -- ...........................*..
29 -- ............................*.
30 -- .............................*
31 -- ...............**.............
32 -- ......**......................
33 -- ....*...*..******.*...........
34 -- .....*..................**....
35 -- .*..**..**.******.**.**.**....
36 -- ....**..*..******.*.....**....
37 -- ..........*......*.....*..*.**
38 -- ...........*..*...............
39 -- ..**..**..*......*.....*..****
40 -- .*.......*.........*.**.......
41 -- ...........*.**...............
42 -- ...........******.*...........
43 -- ..**......*......*.....*..****
44 -- ...*......*......*.....*..*.**
45 -- ...........****...............
46 -- .......................*..*...
47 -- ...........****...*...........
48 -- .......................*..*.*.
49 -- ........*..******.*...........
50 -- ..........*......*............
51 -- .*...................**.......
52 -- ..*........................*..
53 -- .......................*..*.**
54 -- .*..**..**.******.*****.**....
55 -- .....*...................*....
56 -- .........*.........*..........
57 -- .....................**.......
58 -- .*...................*........
59 -- .*.......*...........**.......
60 -- .*******************.*********
61 -- ........................**....
62 -- .*....................*.......
63 -- .*.................*.**.......
64 -- ..........*......*.....*..*.*.
65 -- .....*..................*.....
66 -- ...*......*......*.....*..****
67 -- ..........*......*...........*
68 -- ..**..**..*......*..*..*..****
------------------------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
31 3002 1.000000 0.000000 1.000000 1.000000 2
32 3002 1.000000 0.000000 1.000000 1.000000 2
33 3002 1.000000 0.000000 1.000000 1.000000 2
34 3002 1.000000 0.000000 1.000000 1.000000 2
35 3002 1.000000 0.000000 1.000000 1.000000 2
36 3002 1.000000 0.000000 1.000000 1.000000 2
37 3002 1.000000 0.000000 1.000000 1.000000 2
38 3002 1.000000 0.000000 1.000000 1.000000 2
39 3002 1.000000 0.000000 1.000000 1.000000 2
40 3002 1.000000 0.000000 1.000000 1.000000 2
41 3002 1.000000 0.000000 1.000000 1.000000 2
42 3002 1.000000 0.000000 1.000000 1.000000 2
43 3002 1.000000 0.000000 1.000000 1.000000 2
44 3002 1.000000 0.000000 1.000000 1.000000 2
45 3001 0.999667 0.000471 0.999334 1.000000 2
46 2996 0.998001 0.001884 0.996669 0.999334 2
47 2993 0.997002 0.000471 0.996669 0.997335 2
48 2987 0.995003 0.003298 0.992672 0.997335 2
49 2976 0.991339 0.000000 0.991339 0.991339 2
50 2975 0.991006 0.000471 0.990673 0.991339 2
51 2970 0.989340 0.002827 0.987342 0.991339 2
52 2120 0.706196 0.000942 0.705530 0.706862 2
53 1907 0.635243 0.008009 0.629580 0.640906 2
54 1705 0.567955 0.001413 0.566955 0.568954 2
55 1367 0.455363 0.018373 0.442372 0.468354 2
56 1049 0.349434 0.014604 0.339107 0.359760 2
57 1010 0.336442 0.007537 0.331113 0.341772 2
58 1005 0.334777 0.003298 0.332445 0.337109 2
59 1003 0.334111 0.013662 0.324450 0.343771 2
60 994 0.331113 0.000942 0.330446 0.331779 2
61 983 0.327448 0.019315 0.313791 0.341106 2
62 978 0.325783 0.011306 0.317788 0.333777 2
63 947 0.315456 0.000471 0.315123 0.315789 2
64 672 0.223851 0.003769 0.221186 0.226516 2
65 652 0.217189 0.000942 0.216522 0.217855 2
66 641 0.213524 0.000471 0.213191 0.213857 2
67 423 0.140906 0.004240 0.137908 0.143904 2
68 303 0.100933 0.002355 0.099267 0.102598 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.019839 0.000021 0.011313 0.028562 0.019564 1.001 2
length{all}[2] 0.000454 0.000000 0.000021 0.001062 0.000385 1.001 2
length{all}[3] 0.003206 0.000003 0.000463 0.006414 0.002960 1.000 2
length{all}[4] 0.130184 0.000509 0.086772 0.172741 0.129486 1.000 2
length{all}[5] 0.004094 0.000001 0.001995 0.006199 0.004049 1.000 2
length{all}[6] 0.000610 0.000000 0.000035 0.001347 0.000535 1.001 2
length{all}[7] 0.000633 0.000000 0.000000 0.001907 0.000451 1.000 2
length{all}[8] 0.008361 0.000006 0.003940 0.013282 0.008130 1.000 2
length{all}[9] 0.032610 0.000010 0.026620 0.038579 0.032477 1.003 2
length{all}[10] 0.001568 0.000000 0.000545 0.002775 0.001480 1.000 2
length{all}[11] 0.000065 0.000000 0.000000 0.000197 0.000044 1.000 2
length{all}[12] 0.000449 0.000000 0.000001 0.001062 0.000373 1.000 2
length{all}[13] 0.000905 0.000000 0.000120 0.001829 0.000811 1.000 2
length{all}[14] 0.000229 0.000000 0.000000 0.000676 0.000163 1.000 2
length{all}[15] 0.000665 0.000000 0.000086 0.001429 0.000595 1.000 2
length{all}[16] 0.000228 0.000000 0.000000 0.000674 0.000154 1.000 2
length{all}[17] 0.000441 0.000000 0.000014 0.001042 0.000372 1.000 2
length{all}[18] 0.000067 0.000000 0.000000 0.000203 0.000047 1.000 2
length{all}[19] 0.000766 0.000000 0.000078 0.001645 0.000683 1.000 2
length{all}[20] 0.000894 0.000000 0.000169 0.001783 0.000825 1.000 2
length{all}[21] 0.032880 0.000014 0.025191 0.039918 0.032948 1.004 2
length{all}[22] 0.000230 0.000000 0.000000 0.000687 0.000157 1.000 2
length{all}[23] 0.000914 0.000000 0.000189 0.001797 0.000839 1.000 2
length{all}[24] 0.000513 0.000000 0.000191 0.000867 0.000488 1.000 2
length{all}[25] 0.000704 0.000000 0.000000 0.002096 0.000491 1.000 2
length{all}[26] 0.000450 0.000000 0.000000 0.001114 0.000382 1.000 2
length{all}[27] 0.000260 0.000000 0.000051 0.000510 0.000241 1.000 2
length{all}[28] 0.002717 0.000002 0.000044 0.005836 0.002475 1.000 2
length{all}[29] 0.000319 0.000000 0.000067 0.000590 0.000300 1.000 2
length{all}[30] 0.000180 0.000000 0.000000 0.000397 0.000161 1.000 2
length{all}[31] 0.010920 0.000003 0.007689 0.014007 0.010835 1.001 2
length{all}[32] 0.067566 0.000026 0.057465 0.077368 0.067484 1.000 2
length{all}[33] 0.017744 0.000005 0.013529 0.021889 0.017644 1.000 2
length{all}[34] 0.006807 0.000002 0.004367 0.009745 0.006763 1.000 2
length{all}[35] 0.046298 0.000020 0.037695 0.054943 0.046134 1.000 2
length{all}[36] 0.007993 0.000002 0.005098 0.011026 0.007928 1.000 2
length{all}[37] 0.162109 0.000582 0.116104 0.210115 0.160947 1.000 2
length{all}[38] 0.000678 0.000000 0.000087 0.001435 0.000597 1.000 2
length{all}[39] 0.016939 0.000023 0.008145 0.026741 0.016799 1.000 2
length{all}[40] 0.002787 0.000001 0.001080 0.004738 0.002698 1.000 2
length{all}[41] 0.005006 0.000001 0.002982 0.007199 0.004902 1.003 2
length{all}[42] 0.017494 0.000005 0.013228 0.021973 0.017377 1.001 2
length{all}[43] 0.104712 0.000170 0.079367 0.130613 0.104243 1.000 2
length{all}[44] 0.417753 0.001037 0.355738 0.482230 0.416746 1.000 2
length{all}[45] 0.001055 0.000000 0.000183 0.002028 0.000967 1.000 2
length{all}[46] 0.000452 0.000000 0.000148 0.000774 0.000436 1.000 2
length{all}[47] 0.001746 0.000001 0.000465 0.003073 0.001655 1.000 2
length{all}[48] 0.000257 0.000000 0.000041 0.000505 0.000238 1.000 2
length{all}[49] 0.003140 0.000001 0.001245 0.005293 0.003077 1.000 2
length{all}[50] 0.000706 0.000000 0.000147 0.001275 0.000696 1.000 2
length{all}[51] 0.000438 0.000000 0.000003 0.001031 0.000370 1.000 2
length{all}[52] 0.006241 0.000026 0.000002 0.016293 0.005080 1.000 2
length{all}[53] 0.000313 0.000000 0.000000 0.000837 0.000246 1.000 2
length{all}[54] 0.006198 0.000009 0.000871 0.011942 0.005818 1.000 2
length{all}[55] 0.000624 0.000000 0.000001 0.001765 0.000483 1.000 2
length{all}[56] 0.000223 0.000000 0.000000 0.000683 0.000152 1.001 2
length{all}[57] 0.000216 0.000000 0.000001 0.000671 0.000146 1.000 2
length{all}[58] 0.000228 0.000000 0.000000 0.000677 0.000153 0.999 2
length{all}[59] 0.000232 0.000000 0.000000 0.000672 0.000162 0.999 2
length{all}[60] 0.006433 0.000010 0.000861 0.012616 0.006234 1.003 2
length{all}[61] 0.000359 0.000000 0.000002 0.000980 0.000266 0.999 2
length{all}[62] 0.000226 0.000000 0.000000 0.000669 0.000163 1.000 2
length{all}[63] 0.000225 0.000000 0.000001 0.000671 0.000155 1.001 2
length{all}[64] 0.000125 0.000000 0.000000 0.000345 0.000102 1.000 2
length{all}[65] 0.000297 0.000000 0.000000 0.000785 0.000223 0.999 2
length{all}[66] 0.001895 0.000002 0.000004 0.004711 0.001491 1.005 2
length{all}[67] 0.000096 0.000000 0.000000 0.000277 0.000068 0.998 2
length{all}[68] 0.003903 0.000005 0.000016 0.007807 0.003461 1.002 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.003186
Maximum standard deviation of split frequencies = 0.019315
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.005
Clade credibility values:
/---------------------------------------------------------------------- C10 (1)
|
| /------ C13 (3)
| /---------------71--------------+
| | \------ C7 (28)
| |
| | /-------------------------------- C14 (4)
| /--100-+ |
| | | | /------ C3 (11)
| | | | /--------99--------+
| | \-100-+ | \------ C4 (18)
| | | |
| | | | /------ C5 (24)
| | \--100-+ /--100-+
|-----------100----------+ | | \------ C6 (27)
| | | /-100-+
| | | | \------------- C8 (29)
| | \--64-+
| | \------------------- C9 (30)
| |
| | /------ C2 (7)
| \------------------100-----------------+
| \------ C20 (8)
|
+ /------ C11 (2)
| |
| /--99--+------ C48 (22)
| | |
| | \------ C49 (23)
| /--------------------100--------------------+
| | |------------- C26 (10)
| | |
| | \------------- C45 (20)
| |
| | /--------------------------------------------- C18 (5)
| | |
| | | /-------------------------------------- C21 (9)
| | | |
| /--100-+ /-100-+ | /------ C31 (12)
| | | | | | /--100-+
| | | | | | | \------ C36 (15)
| | | | | | /-100-+
| | | | \--99--+ | \------------- C35 (14)
| | | | | /-100-+
| | | | | | \------------------- C32 (13)
| | | | | /--100-+
| | \-100-+ | | \------------------------- C40 (19)
| | | \-100-+
\--57-+ | | /------ C37 (16)
| | \-----------100-----------+
| | \------ C38 (17)
| |
| | /------ C19 (6)
| | |
| \---------------------100--------------------+------ C50 (25)
| |
| \------ C52 (26)
|
\---------------------------------------------------------------- C47 (21)
Phylogram (based on average branch lengths):
/-- C10 (1)
|
| / C13 (3)
| /+
| |\ C7 (28)
| |
| | /------------- C14 (4)
| /---------+ |
| | | | / C3 (11)
| | | | |
| | \------------------------------------------+ | C4 (18)
| | | |
| | | | C5 (24)
| | \---------------+
|-+ | C6 (27)
| | |
| | | C8 (29)
| | |
| | \ C9 (30)
| |
| | / C2 (7)
| \------+
| \ C20 (8)
|
+ / C11 (2)
| |
| | C48 (22)
| |
| | C49 (23)
| /+
| || C26 (10)
| ||
| |\ C45 (20)
| |
| | / C18 (5)
| | |
| | |--- C21 (9)
| | |
|/---+/-+ / C31 (12)
|| || | |
|| || | | C36 (15)
|| || | /+
|| || | |\ C35 (14)
|| || | |
|| || | | C32 (13)
|| || | |
|| \+ | | C40 (19)
|| | \-+
\+ | |/ C37 (16)
| | \+
| | \ C38 (17)
| |
| |/ C19 (6)
| ||
| \+ C50 (25)
| |
| \ C52 (26)
|
\--- C47 (21)
|---------| 0.100 expected changes per site
Calculating tree probabilities...
Credible sets of trees (632 trees sampled):
50 % credible set contains 80 trees
90 % credible set contains 357 trees
95 % credible set contains 482 trees
99 % credible set contains 602 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Wed Nov 09 22:46:06 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result--
-- Starting log on Thu Nov 10 16:37:36 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result/original_alignment/codeml,A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C52 20094 sites
reading seq# 2 C8 20094 sites
reading seq# 3 C14 20094 sites
reading seq# 4 C10 20094 sites
reading seq# 5 C11 20094 sites
reading seq# 6 C35 20094 sites
reading seq# 7 C13 20094 sites
reading seq# 8 C18 20094 sites
reading seq# 9 C9 20094 sites
reading seq#10 C47 20094 sites
reading seq#11 C5 20094 sites
reading seq#12 C38 20094 sitesns = 12 ls = 20094
Reading sequences, sequential format..
Reading seq # 1: C52
Reading seq # 2: C8
Reading seq # 3: C14
Reading seq # 4: C10
Reading seq # 5: C11
Reading seq # 6: C35
Reading seq # 7: C13
Reading seq # 8: C18
Reading seq # 9: C9
Reading seq #10: C47
Reading seq #11: C5
Reading seq #12: C38
Sites with gaps or missing data are removed.
12054 ambiguity characters in seq. 1
42 ambiguity characters in seq. 2
17307 ambiguity characters in seq. 3
17307 ambiguity characters in seq. 4
12060 ambiguity characters in seq. 5
12060 ambiguity characters in seq. 6
17337 ambiguity characters in seq. 7
12054 ambiguity characters in seq. 8
42 ambiguity characters in seq. 9
39 ambiguity characters in seq. 10
42 ambiguity characters in seq. 11
12060 ambiguity characters in seq. 12
5779 sites are removed.
Sequences read..
Counting site patterns.. 0:00
Compressing, 470 patterns at 919 / 919 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 470 patterns at 919 / 919 sites (100.0%), 0:00
Counting codons..
528 bytes for distance
458720 bytes for conP
41360 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
Species C7?
The loglikelihoods for models M1, M2, M7 and M8 are respectively
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHY
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHY
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPIRDVLQEIKYCYRNGFEGYVFVPEYCRDLVDCDRKDHY
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHY
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHY
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHY
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHY
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPIRDVLQEIKYCYRNGFEGYVFVPEYCRDLVDCDRKDHY
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VIGVLGNGISDLKPVLLTEPSVMLQGFIVRASCNGVLEDFDLKIARTGRGAIYVDQYMCG
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VIGVLGNGISDLKPVLLTEPSVMLQGFIVKAICNGALEDFDLKIARTGRGAIYVDQYMCG
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPH
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPH
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 ADGKPVIEGDFKDYFGDEDVIEFEGEDYHCAWTVVRDEKPLNQQTLFTIQEIQYNLDIPH
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPH
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPH
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPH
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPH
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 ADGKPVIEGDFKDYFGDEDIIEFEGEEYHCAWTTVRDEKLLNQQTLFTIQEIQYNLDIPH
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFIAATLKC
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFIAATLKC
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KLPNCATRHVAPPVKKNSKIVLSEDYRKLYDIFGSPFMGNGDCLSKCFDTLHFIAATLRC
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFVAATLKC
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFIAATLKC
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFIAATLKC
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFVAATLKC
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KLPNCATRHVAPPVKKNSKIVLSEDYKKLYEIFGSPFMGNGDCLSKCFDTLHFIAATLRC
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQY
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQY
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 PCGSESSGVGDWTGFKTACCGLSGKVKGVTLGDVKPGDAVVTSMSAGKGVKFFANCVLQH
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQY
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQY
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQY
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQY
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 PCGAESSGVGDWTGFKTACCGLVGKVLGVTLGDIKPGDAVVTSMSAGKGVKFFANCVLQH
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAV
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAV
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 AGDVENVSIWKVIKTFTVDETVCTPDFEGELNDFIKPESKSPTACSIKRAFITGEIDDAV
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAV
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAV
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAV
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAV
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 AGDVENVSVWKVIKTFTVDETVCTPDFEGELNDFIKPESKSPTACSIKRAFITGEIDDAV
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 HDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYD
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 HDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYD
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 HDCIITGKLDLSTNLFGNVGLLFKKTPWFVQKCGALFVDAWKVVEELCSSLKLTYKQIYE
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 HDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYD
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 HDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYD
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 HDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYD
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 HDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYD
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 HDCIITGKLDLSTNLFGNVGLLFKKTPWFVQKCGALFVDAWKVVEELLGSLKLTYKQIYE
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVL
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVL
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VVASLCTSAFTIVNYKPTFVVSDNRVKDLVDKCVKVLVKAFDVFTQTITIAGIEAKCFVL
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVL
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVL
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVL
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVL
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VVASLCTSAFTIVNYKPTFVVLDNRVKDLVDKCVNILVKAFDVFTQTITIAGIEAKCFVL
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDD
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDD
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 GAKYLLFNNALVKLVSVKILGKKQKGLESAFFATSLVGATVNVTPKRTETANISLNKVDD
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDD
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDD
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDD
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDD
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 GAKYLLFNNALVKLVSVKILGKKQKGLESAFFATSLVGATVNVTPKRTETATISLNKVDD
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVTPGEGHIVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSK
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVTPGEGHIVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSK
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VAAPGEGYIVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYDVDDDTKSK
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVTPGEGHIVIVGDMAFYKSREYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSK
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVTPGEGHVVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSK
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVTPGEGHVVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSK
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VVTPGEGHIVIVGDMAFYKSEEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSK
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VVAPGEGYIVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYDIVYDVDDDTKGK
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICL
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICL
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 MIAKLGSSFEYDGDIDAAIVKVNELLIEFKQQNLCFRALKDDESIFVEAYLKKYKMPACL
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICL
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICL
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICL
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICL
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 MTAKLGSSFEYDGDIDAAVTKVNELLIEFKQQSLCFRALKDDKSIFVEAYLKKYKMPACL
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYR
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYR
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 AKHIGLWNIIKQDSCKKGFLSLFNHLNELEDVKETNVQAIKDILCPDLLLDLDYGAIWYK
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYR
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYR
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYR
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYR
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 AKHIGLWNIIKKDSCKKGFLSLFNHLNELEDVKETNVQAIKNILCPDLLLDLDYGAIWYK
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFST
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFST
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 CMPSCSDLSVLGSVQLLIGNGVKVVCDGCKVFANQLSNGYNKLCNAARTDIEIGGIPFST
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFST
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFST
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFST
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFST
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 CMPSCSDLSVLGSVQLLIGNGVKVVCDGCKVFANQLSNGYNKLCNAARTDIEIGGIPFST
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPK
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPK
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 FKTPTNTFIEMTDAIYSVIEQGKALSFGNADVPVLDNGTISTDDWSEPILLEPAEYVKPK
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPK
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPK
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPK
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPK
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 FKTPTNTFIEMTDAIYSVIEQGKALSFGNADVPVLDNGTISTDDWSEPILLEPAEYVKPK
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITR
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITR
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 NNGNVIVIAGYTFYKDEDEHFYPYGSGKIVQRMYNKMGGGDKTVSFSEEVDVQEIAPVTR
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITR
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITR
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITR
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITR
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 NNGNVIVIAGYTFYKDEDEHFYPYGSGKIVQRMYNKMGGGDKTVSFSEEVDVQEIAPVTR
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDTLAEQGVELEGYF
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDTLAEQGVELEGYF
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VKLEFEFDNEIVTGVLEQAIGTRYKFTGTTWEEFEDSISEELDAIFDTLANQGVELEGYF
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDALAEQGVELEGYF
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDTLAEQGVELEGYF
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDTLAEQGVELEGYF
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDALAEQGVELEGYF
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VNLEFEFDNEIVTGVLEQAIGTRYKFTGTTWEEFEDSISEELDAIFDTLANQGVELEGYF
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDTCGGFDINNPDGVMISQYDLNSAVDVKSDSDASVEDTSSISDNEDVEQIEKENVSAA
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDTCGGFDINNPDGVMISQYDLNSAVDVKSDSDASVEDTSSISDNEDVEQIEKENVSAA
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 IYDTCGGFDIKNPDGIMISQYDINNIADEKSETGASSEEEEVESVEEDAENEIEASDCVE
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDTCGGFDINNPDGVMISQYDLNSAVDVRSDSDASVEDTSSISDNEDVEQIEKENVSAA
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDTCGGFDINNPDGVMISQYDLNSAVDVKSDSDASVEDTSSISDNEDVEQIEKENVSAA
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDTCGGFDINNPDGVMISQYDLNSAVDVKSDSDASVEDTSSISDNEDVEQIEKENVSAA
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDTCGGFDINNPDGVMISQYDLNSAVDVRSDSDASVEDTSSISDNEDVEQIEKENVSAA
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 IYDTCGGFDFKNPDGIMISQYDINNIADEKSETGASSEEEEVESVEEDAENEIVEASEAI
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKT
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKT
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 ETSSQEDVETVEVEDVTSTEEDV----EIVEVSAKDDPWAAAVDVQEAEQIKPSLPPFKT
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKT
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKT
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKT
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKT
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 EETSSQEEVETVEVEDITSAEDV----EIVEVSAKDDPWAAAVDVQEAEHVKPSLPPFKT
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 TNLNGKIILKQQDNNCWINACCYQLQAFDFFNNEAWEKFKKGDVMDFVNLCYAATTLERG
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 TNLNGKIILKQQDNNCWINACCYQLQAFDFFNNEAWEKFKKGDVMDFVNLCYAATTLERG
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQ
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQ
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 HSGDAEYLLELMLNDYSTAKIVLAARCGCGEKEIVLERTVFKLSPLRNDFKYGVCGDCMQ
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQ
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQ
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQ
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQ
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 HSGDAEYLLELMLNDYSTAKIVLVAKCGCGEKEIVLERTVFKLTPLKDEFNYGVCGECMQ
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 INMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCV
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 INMCKFASVEGSGVFVHDR-IEKRTPVSHFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCV
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 INNAGVVECLKDLVYLSMIEWKNARPVSDFIVKPIMHAVYIGSTQSGHYMIDDCEHGYCV
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 INMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCV
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 INMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCV
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 INMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCV
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 INMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCV
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 INRCKVASVEGSGLFVHDC-IDKQTPTSQFIVKPIMHAVYTGTTQNGHYMVDDIEHDYCV
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQ
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQ
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 DGMGIKPCKGKLYTSTLFINANVMTRVEKPKQQSKVEKVEQQPEIEEKKPSIEKEEFQSP
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQ
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQ
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQ
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQ
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 DGMGIKPRKKRLYTSTLFINANVMTRVEKPKQQPKVEKVEQQPEIEEKKPSIEKEEVQSP
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKL
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKL
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KNDDLILPFYKAGKLSFYQGDLDVLINFLEPDVIVNAANGDLKHMGGVARAIDVFTGGKL
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKL
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKL
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKL
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKL
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KNDDLILPFYKAGKLSFYQGDLDVLINFLEPDVIVNAANGDLKHMGGVARAIDVFTSGKL
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 TVRSKDYLKKNKSIAPGNAVFFENVIEHLSVLNAVGPRNGDSRVEAKLNNVYKAIAKCEG
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 TERVMDYLKKNKSIAPGNAVFFENVIENLSVLNAVGPRNGDSRIEGKLNNVYKAIAKCEG
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTED
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTED
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KILTPLISVGIFNVKLETSLQCLLKTVNDRELNIFVYTDQERQAVENFFSGSIPVKVTED
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTED
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTED
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTED
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTED
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KILTPLISVGIFSVKLEMSLQCLLKTVNDRELNVFVYTDQERQAIENFFSGSIPVKVTED
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSN
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSN
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 NVNHERVSVSFDKTYGEQLKGTVVIKDKDVTNQLPSAFDVGQKVVKAIDLDWQAHYGFHD
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSN
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSN
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSN
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSN
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 NVNHERVSVSFDKTYGEQLKGTVVIKDKDVTNQLPSAFDVGQKVVKAIDVDWQAHYGFHD
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDF
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDF
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 AAAFSASSHDAYKFEVVTHSNFIVHKQTDNNCWINAICLALQRLKPQWKFPGVRGLWNEF
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDF
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDF
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDF
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDF
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 AAAFSASSHDAYKFEVVTHSNFIVHKQTDNNCWINAICLALQRLKPQWKFPGVRGLWNEF
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETF
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETF
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LERKTQGFVHMLYHISGVKKGEPGDAELTLHKLGDLMDNDCEIIVTHTTACDKCAKVEKF
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETF
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETF
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETF
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETF
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LERKTQGFVHMLYHISGVKKGEPGDAELTLHKLGDLMDNDCEIIVTHTTACDKCSKVEKF
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVAITSLIGPVVGDVIDATGYICYTGL
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVAITSLIGPVVGDVIDATGYICYTGL
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 TGPVVAAPLAIHGTDETCVHGVSVNVKVTQIKGTVAITSLSGPIIGEVLEATGYICYRGS
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVVITSLIGPVVGDVIDATGYICYTGL
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVAITSLIGPVVGDVIDATGYICYTGL
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVAITSLIGPVVGDVIDATGYICYTGL
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVVITSLIGPVVGDVIDATGYICYTGL
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 TGPVVAAPLAIHGTDETCVHGVSVNVKVTQIKGTVAITSLIGPIIGEVLEATGYICYRGS
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NSRGHYTYYDNLNSLMVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESH
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NSRGHYTYYDNLNSLMVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESH
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 SKNGHYTYYDNRNGLMIDAEKAYHFNKDLLQVTTAIASNFVVKKPQVEEKPK--------
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NSRGHYTYYDNLNSLLVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESH
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NSRGHYTYYDNLNSLMVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESH
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NSRGHYTYYDNLNSLMVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESH
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NSRGHYTYYDNLNSLLVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESH
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 SKNGHYTYYDNRNGLMIDAEKAYHFNKDLLQVTTAIASNFVVKKPQVEEKPK--------
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYL
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYL
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 -TRVFNRIEESPKVIVQEQKLLAIESGADYALTEFGRYADMFFMAGDKILRFLLEVFKYL
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYL
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYL
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYL
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYL
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 -TRVFNRVDEPPKTIVQEQKLLAIESGADYALTEFGRYADMFFMAGDKILRFLLEVFKYL
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHF
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHF
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LVLFMCLRSTKMPKVKVKPPHAFKDLGAKVRTLNYMRQLNKPSVWRYAKLVLLLIAIYNF
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHF
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHF
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHF
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHF
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LVLFMCLRSTKMPKVKVKPPHAFKDLGAKVRTLNYMRQLNKPAVWRYAKLVLLLIAIYNF
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWD
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWD
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 FYLFVSIPVVHKLACNGAVQAYKNSSFVKSEVCGNSILCKACLASYDELADFQHLQVTWD
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWD
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWD
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWD
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWD
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 FYLFVSIPVVHKLTCSGAVQAYKNSSFVKSEVCGNSILCKACLASYDELADFQHLQVAWD
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINF
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINF
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 FKSDPLWSRLVQLSYFAFLAVFGNNYVRCVLMYFVSQYLNLWLSYFGYVEHSWFLHVVNF
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINF
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINF
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINF
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINF
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 FKSDPLWNKLVQLSYFVFLAVFGNNYVRCFLMYFVSQYLNLWLSHFGYVEHSWFLHVVSF
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVH
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVH
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 ESISAEFVIIVIVVKAVLVLKHIVFSCSNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVH
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVH
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVH
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVH
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVH
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 ESISAEFVIIVILVKAVLALKHIVFSCSNPSCKTCSKTARQTRIPIQVVVNGSMKTVYVH
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECS
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECS
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 ANGTGKLCKKHNFYCKNCDSYGFENTFICDEIVRDLSNSVKQTVYATDRSHHEVTKVECS
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECS
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECS
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECS
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECS
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 ANGTGKLCKKHNFYCKNCDSYGFENTFICDEIVRDLSNSVKQTVYATDRSHQEVTKVECS
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFS
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFS
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 DGFYRFYVGDEFTSYDYDVKHKKYSSQEVLKNMLLLDDFIVYSPSGSSLANVRNACVYFS
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFS
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFS
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFS
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFS
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 DGFYRFYVGDEFTSYDYDVKHKKYSSQEVLKNMLLLDDFIVYSPSGSSLANVRNACVYFS
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QLIGRPIKIVNSELLEDLSVDFKGSLFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVT
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVT
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 QLIGKPIKIVNSDLLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLDECYRACNLDVS
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVT
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVT
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVT
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVT
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 QLIGKPIKIVNSDLLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLDECYKACNLDVS
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLT
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLT
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 FSTFEMAVNNAHRFGVLITDRSFNNFWPSKVKPGSAGVSAMDIGKCMTSDAKIVNAKVLT
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLT
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLT
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLT
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 FSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLT
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 FSTFEMAVNNAHRFGILITDRSFNNFWPSKVKPGSSGVSAMDIGKCMTSDAKIVNAKVLT
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPK
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPK
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 QRGKSVVWLSQDFAALSSTAQKVLVKTFVEEGVNFSLTFNAVGSDDDLPYERFTESVPPK
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPK
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPK
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPK
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPK
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 QRGKSVVWLSQDFAALSSTAQKVLVKTFVEEGVNFSLTFNAVGSDDDLPYERFTESVPPK
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFD
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFD
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 SGSGFFDVIKQLKQIMMLILAFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFD
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFD
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFD
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFD
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFD
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 SGSGFFDVIKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFD
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRS
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRS
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 DTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVALVGRS
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRS
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRS
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRS
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 DSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRS
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 DTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLENMRPIPDVPAYVALVGRS
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGA
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGA
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LVFAINAAFGVTNMCYDHTGSAVSKDSYFDTCVFNAACTTLTGLGGTIIYCAKQGLVEGA
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGA
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGA
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGA
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGA
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LVFAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNAACTTLTGLGGTIVYCAKQGLVEGA
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDN
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDN
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDN
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDN
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDN
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDN
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDN
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDN
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 WFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVL
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 WFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVL
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 WFVYDNEFGNGYICGNSVLGFFKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAACYGVL
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 WFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVL
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 WFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVL
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 WFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVL
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 WFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVL
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 WFVYDKEFGNGYICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVL
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGF
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGF
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KFKKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGILDAGF
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGF
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGF
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGF
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGF
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KFKKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGVLDAGF
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMR
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMR
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 IIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMR
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMR
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMR
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMR
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMR
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 IIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMR
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLY
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLY
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 SYETIVNSTPIERIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLY
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLY
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLY
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLY
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLY
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 SYETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLY
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTS
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTS
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 TPPTVSVNSTLQSGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTT
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTS
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTS
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTS
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTS
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 TPPTVSVNSTLQSGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVFCPRHVIASDTT
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVINYDNELSGVRLHKFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVINYDNELSGVRLHNFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 RVINYENEMSSVRLHNFSVSKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSIKAG
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVINYDNELSGVRLHKFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVINYDNELSGVRLHNFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVINYDNELSGVRLHNFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVINYDNELSGVRLHKFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 RVINYENEMSSVRLHNFSVSKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSIKAG
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGN
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGN
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 ESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGTLYFVYMHHLELGN
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGN
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGN
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGN
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGN
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 ESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGN
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLES
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLES
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 GSHVGSNLEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLES
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLES
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLES
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLES
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLES
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 GSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLES
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFT
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFT
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 YNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFT
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFT
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFT
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFT
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFT
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 YNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDCIVRLNKGFGGRTILSYGSLCDEFT
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAIT
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAIT
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 PTEVIRQMYGVNLQAGKVTSFFYPIMTAMTILFAFWLEFFMYTPFTWINPTFVSIVLAVT
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAIT
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAIT
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAIT
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAIT
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 PTEVIRQMYGVNLQAGKVKSFFYPIVTAMTILFAFWLEFFMYTPFTWINPAFVSFVLAVT
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDM
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDM
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 TLVSTVFVSGIKHKMLFFMSFVLPSVILVTAHNLFWDFSYYESLQSIVENTNTMFLPVDM
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDM
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDM
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDM
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDM
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 TLVSTVFVSGIKHKMLFFMSFVLPSVVLVTAHNLFWDFSYYESLQSIVENTNTMFLPVDM
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLC
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLC
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 QGIMLTVFCFIVFVTYSVRFFTCKQSWFSLAVTTVLVIFNMVKIFGTSDEPWTENQIAFC
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLC
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLC
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLC
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLC
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 QGVMLTVFCFIVFVTYSVRFFTCKQSWFSLAVTTVLVIFNMFKIFGTSDEPWTENQIAFC
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFC
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFC
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 FVNMLTMIVSLTTKDWMVVVASYRIAYYIVVCVMPSAFVSDFGFMKCISIVYMACGYLFC
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFC
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFC
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFC
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFC
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 FVNMLTMIVSLTTKDWVVVVASYRVAYYIVVCVMPAAFVSDFGFMKCISIVYMACGYLFC
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGER
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGER
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 CYYGILYWVNRFTCMTCGVYQFTVSAAELKYMTANNLSAPKNAYDAMILSAKLIGVGGKR
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGER
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGER
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGER
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGER
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 CYYGILYWVNRFTCMTCGVYQFTVSAAELKYMTANNLSAPKNAYDAMILSAKLIGVGGKR
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKL
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKL
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 NIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEIVLEKL
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKL
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKL
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKL
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKL
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 NIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEIVLEKL
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKND
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKND
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LALIAFFLSKHNTCDLSELIESYFENTTILQSVASAYAALPSWIALEKARADLEEAKKND
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKND
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKND
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKND
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKND
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LALIAFFLSKHNTCDLSELIESYFENTTILQSVASAYAALPSWIAFEKRRADLEEAKKND
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHS
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHS
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VSPQILKQLTKAFNIAKSDFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIISAMHS
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHS
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHS
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHS
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHS
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VSPQILKQLTKAFNIAKSDFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKVVSAMHS
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHY
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHY
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LLFGMLKKLDMSSVNTIIDQARNGVLPLSIIPAASATRLVVVTPSLEVFSRIRQENNVHY
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHY
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHY
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHY
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHY
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LLFGMLKKLDMSSVNTIIDQARNGVLPLSIIPAASATRLVVVTPSLEVFSRIRQENNVHY
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAV
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAV
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 AGAIWTIVEVKDANGSHVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKERAV
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAV
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAV
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAV
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAV
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 AGAIWTIVEVKDANGSHVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKERAV
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFY
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFY
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KASSTLDGEAFGSGKALMAAESGKSFMYAFIASENNLKYVKWESNNDIIPIELEAPLRFY
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFY
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFY
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFY
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFY
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KASAILDGEAFGSGKALMAAESGKSFMYAFIASDNNLKYVKWESNNDIIPIELEAPLRFY
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDP
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDP
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSSLLTLCAFAPDP
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDP
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDP
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDP
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDP
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VDGVNGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSSLLTLCAFAPDP
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEH
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEH
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 AKAYVDAVKRGMQPVNNCVKMLSNGAGNGMAITNGVEANTQQDSYGGASVCIYCRCHVEH
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEH
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEH
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEH
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEH
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 AKAYVDAVKRGMQPVNNCVKMLSNGAGNGMAITNGVEANTQQDSYGGASVCIYCRCHVEH
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ----------------------------------------------------------KL
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSY
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ----------------------------------------------------GATIDQSY
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ----------------------------------------------------SSTVDQSY
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ----------------------------------------------------------EL
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSY
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 PAIDGLCRYKGKFVQIPTGTQDPIRFCIENEVCVVCGCWFNNGCMCDRTSMQSSTVDQSY
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSY
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ----------------------------------------------------SSTVDQSY
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ----------------------------------------------------------EL
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSY
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSY
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ----------------------------------------------------------KL
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ----------------------------------------------------------KL
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSY
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 PAIDGMCRYKGKFVQIPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQSSTVDQSY
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVV
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 LKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVV
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 LNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 --RVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYVV
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVV
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVV
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 LNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVV
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVV
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 --RVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVV
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 --RVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYVV
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIV
***************************************************:****:*
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIR
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 KRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKDGRCEFGNVARKDLTKYTMMDLCYAIR
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFNYKEGRCEFGNVARRNLTKYTMMDLCYAIR
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 KRCTKSVMDHEQVCYNDLKDSGVVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIR
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARMNLTKYTMMDLCYAIR
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIR
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFNYKEGRCEFGNVARRNLTKYTMMDLCYAIR
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIR
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNIARRDLTKYTMMDLCYAIR
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIR
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIR
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIR
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 KRCTKSVMDHEQVCYNDLKDSGVVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIR
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNIARRDLTKYTMMDLCYAIR
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 KRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIR
*****:****************.******* **:*******:** :**************
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAF
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACDESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAF
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAF
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAF
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAF
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 NFDERNCEVLKEILVIVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 NFDEKNCEVLKEIFVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAF
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAF
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 NFDERNCEVLKEILVIVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAF
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAF
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTLGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 NFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAF
****:********:* :*** *.*********************:***************
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 CDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTTPGFGCACVTSYYSYMMPLMGMTSCLE
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 CDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTVPGFGCACVTSYYSYMMPLMGMTSCLE
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 CDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 CDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 CDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 CDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTTPGFGCACVTSYYSYMMPLMGMTSCLE
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 CDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 CDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 CDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLE
**:********:*********************.**************************
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEHLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCA
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 AENFVKSDIYGSDYKHYDLLAYDFTDHKEKLFQKYFKHWDRTYHPNCSDCTSDDCIIHCA
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 SENFVKSDIYGADYKQYDLLAYDFTDHKEKLFQKYFKHWDRTYHPNCSDCTSDECIIHCA
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKDYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCA
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCA
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 SENFVKSEIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDDCIIHCA
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDDCIIHCA
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCA
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCA
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEHLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEHLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCA
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 SENFVKSDIYGADYKQYDLLAYDFTDHKEKLFHKYFKHWDRTYHPNCSDCTSDECIIHCA
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 SENFVKSEIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDDCIIHCA
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 SENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCA
:******:***:***:*********:**: **.****:***************:******
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDL
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDL
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPSTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 NFNTLFSMTVPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDL
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGVVWNLDVKLDTMKLSMTDL
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDL
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDMMKLSMTDL
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDL
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 NFNTLFSMTVPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDL
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDL
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDMMKLSMTDL
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDL
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPSTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDL
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 NFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDL
*********:* *****************************:********* ***:****
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSSALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEE
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 LRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEE
**************.******************:**************************
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICHAQFVYKIVGKYFECYDGGCISAR
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAR
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEASMTDFNYYRYNRVTVLDICQAQFVYKVVCKYFECYDGGCINAR
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAR
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAR
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAR
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAR
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAR
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 GSELILKHFFFAQGGGAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAR
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAR
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAR
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAR
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAR
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAR
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICHAQFVYKIVGKYFECYDGGCISAR
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICHAQFVYKIVGKYFECYDGGCISAR
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAR
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAR
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAR
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 GSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAR
**** ********** *:******************:******:* ***:*******.**
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGK
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGK
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGK
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGK
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGK
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGK
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 EVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGK
***********************************:************************
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDN
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDN
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ARARTVGGVSLISTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDN
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDN
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATCNATVVIGSTKFYGGWDNMLKNLMRDVDN
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDN
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDN
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDN
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDN
***********:******************* *******:********************
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMVLGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTG
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTG
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTG
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTG
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHLGCCTHSDRFYRLSNELAQVLTEVVHCTG
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTG
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTG
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 GCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTG
*************************:*****:*****.**********************
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNC
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 GFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNC
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNC
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNC
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNC
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNC
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNC
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNC
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 GFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNC
***:**************************************:************:****
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNN
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 YRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADIAAFKATLYYQNN
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNN
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNN
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNN
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNN
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 YRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNN
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 YRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNN
*****:*::*************************************** ***********
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGADGDYYLPYPDPSRILSAGVFVDDIVKTD
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 VFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDVVKTD
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGADGDYYLPYPDPSRILSAGVFVDDIVKTD
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 VFMFTSKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGADGDYYLPYPDPSRILSAGVFVDDIVKTD
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VFMSTSKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 VFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTD
*** *:********.****************.***********************:****
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDG
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAFQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAFQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 NVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEG
*************************:*****:**********.****:**********:*
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQ---------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQ---------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQ---------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQ---------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 QDKFWSEDFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQ---------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQ---------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 QDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKH
*******:*************
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 KFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSALG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMDHKPQLSFPLCANGNVFGLYKSSAVG
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 KFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 KFIMSITPYVCSFNCCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 KFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 KFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 KFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMDHKPQLSFPLCANGNVFGLYKSSAVG
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 KFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 KFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVG
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVVG
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 SEDVEDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAILKEVIG
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYRLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVVG
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIG
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 SEDVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAILKEVIG
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVVG
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 SEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVVG
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTK
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 PKEIVLQWEASKIKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTK
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTK
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQINKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTK
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTK
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 PKEIVLQWEASKIKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 PKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTK
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 PKEIVLQWEASKIKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 PKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYK
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFT
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFT
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKATILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFT
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKASILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQIIGKQKFT
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFT
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFT
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFT
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKATILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 LTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFT
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRI
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 TIPGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRI
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRI
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRLIPQRI
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNADRCSRIIPQRV
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRI
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRI
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRLIPQRI
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRI
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 TIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRI
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 RVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVY
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYE
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYD
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYE
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTQRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYE
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYE
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYE
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 VGDPQQLPAPRTLINKGLLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYE
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTQRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 VGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYE
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQ
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQ
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQ
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQ
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQ
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQ
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQ
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQ
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVRAFLTHNPKWRKAVFISPYNSQ
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQ
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQ
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQ
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVRAFLTHNPKWRKAVFISPYNSQ
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQ
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQ
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQ
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQ
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQ
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQ
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQ
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQ
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINHKQLEVVKAFLAHNPKWRKAVFISPYNSQ
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQ
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 NKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQ
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHSTNVNRFNVAITRAKVGILCIMCD
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCD
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCD
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCD
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCD
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCD
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHSTNVNRFNVAITRAKVGILCIMCD
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 NYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCD
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKAGILCIMCD
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 NYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCD
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RKMYDNLDFYELKDSKVGLQAKPEACGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGL
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGL
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKNEQYIPPAYATTYMSLSDNFKTSDGL
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGL
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 KTIYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSGGL
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGL
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGL
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGL
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 RPMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 RSMYDNLDFYELKDSKIGLQAKPETCGLFKDCSKNEQYIPPAYATTYMSLSDNFKTSDGL
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 RTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGL
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDN
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDN
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 AVNIGIKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDN
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 AVNIGIKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGVHVCGDN
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDN
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDN
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 AVNIGIKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDN
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 AVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDN
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWH
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWH
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFSHLIPLMRKGQPWH
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWH
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWH
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWH
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWH
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWH
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWH
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWH
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWH
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWH
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWH
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWH
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 VGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWH
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQ
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 IVRRRIVQMICDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQ
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQ
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSAQ
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQ
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQ
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 IVRRRIVQMICDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQ
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCECGKTATCYSSSQ
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 IVRRRIVQMICDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 IVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQ
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 CVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSINHHDVCNIHRNEHVASGDAIMTRCLA
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 CVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 CVYACFKHALGCDYLYTPYGIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 SVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLA
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCA
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 IHDCFVKRIDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCA
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCA
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPTAIHDVGNPKGIRCA
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCA
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCA
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCA
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 IHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCA
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRIRS
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRIRS
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 TTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 TTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRS
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPTPFFYYDDSNCELVDGQPNYVPLKSN
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKAN
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKAN
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSSCELVDGQLNYVPLKSN
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKAN
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKAN
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKAN
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPTPFFYYDDSNCELVDGQPNYVPLKSN
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKAN
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 KLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSN
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQS
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQS
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQS
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNMFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQS
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQS
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQS
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQS
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQS
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQS
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQS
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQS
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQS
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNMFMQAGFTIWCPQNFDTYMLWHGFVNSKALQS
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQS
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 VCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQS
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LENVAFNVVKKGAFAGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKR
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVREGPTDKCIFTNKTSLPTNVAFELYAKR
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 LENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKR
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYNFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYNFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 KLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAG
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 SFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 SFERFTTTKDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTIGNKPVTWYMYVRKNGEYVEQ
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 SFERFTTTRDAVLISNNVVKGLSAIKLQYGFLNDLPVSTVGNKLVTWYIYVRKNGEYVEQ
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTIGNKPVTWYMYVRKNGEYVEQ
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 SFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 SFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 SFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 SFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 SFERFTTTKDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 SFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 SFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQ
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 IDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMH
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKG
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKG
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMTNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKG
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKG
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKG
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKG
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMTNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 LLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKS
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLE
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 LDLNVMSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWYPGYSMPTLYKIQRMCLE
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLE
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLE
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWHPGYSMPTLYKIQRMCLE
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWHPGYSMPTLYKIQRMCLE
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLE
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLE
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLE
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLE
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLE
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 LDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLE
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTT
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 RCNLYNYGAQAKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTT
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 RCNLYNYGAQVRLPDGITTNVVKYTQLCQYLNTTTVCVPHKMRVLHLGAAGASGVAPGST
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTT
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGAYGVAPGST
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTT
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTT
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGAYGVAPGST
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 RCNLYNYGAQAKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTT
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 RCNLYNYGAQAKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 RCNLYNYGAQVKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGST
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDCEN
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGEN
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGEN
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGEN
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGEN
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGEN
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGEN
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 VLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGEN
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGEN
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 VLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGEN
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSE
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSE
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSE
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 TSKDGFFTYINGFIREKLSLGGSVAIKVTEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSE
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSE
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSE
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 TSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSE
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVN
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVN
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVN
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 GFLIGINYLGPYCDRAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 GFLIGISYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVN
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVN
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 GFLIGINYLGPYCDRAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVN
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 GFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 GFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVN
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 --------------------------------------
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 --------------------------------------
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 --------------------------------------
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 LKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 --------------------------------------
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTT
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 --------------------------------------
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 LKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 --------------------------------------
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 LKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 LKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
>virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTATTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGACGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCTATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTGGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGAGACTTCGTGAAGACTGCTCCAGGTTTTGGTTGCGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTTACCGAACATAAGGAGCACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACGATGAAGTTGAGTATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACACTTTTTCTTCGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCACGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGACGGTGGGTGCATTAGTGCTCGCGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTACCGCCTCTCCAATGAGTTAGCGCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAACGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCGGATTTAGGTTATGTAGCTGACATTAATGCCTTTAAAGCAACACTTTATTACCAGAATAACGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTATTATCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGACGCATACCCACTTACAAAACACCCTAAGCCTGCTTATCAGAAAGTGTTTTATACTCTACTAGATTGGGTTAAACATTTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCCACTGTCTTGCAAGCTGCAGGCATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAATGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTCGGTTCAGAGGCTGTTGAAGATTTCAACAAACTCGCAGTTTCTGACTGGACTAATGTAGAAGACTACAAACTTGCAAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGCACGAGTACTTATAAATTGACACCAGGTATGATCTTTGTGTTGACTTCTCATAATGTGAGTCCTCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATCCAAGGCCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCTAGAATAGTCTACACTGCATGTTCTCATGCGGCTGTAGACGCTTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGATTGTTACACTGGCTTCAAGCCTAATAACACCAATGCGCAGTACTTGTTTTGTACTGTCAATGCTCTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGTACTAATTATGATCTTAGTGTCATAAATAGCCGACTGAGTTACAAACACATTGTTTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCCGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAATTTGTACCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAACAAGCAACTAGAGGTTGTCAAGGCCTTTTTAGCACATAATCCAAAATGGCGTAAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTACTTGGTTTGCAAACGCAAACCGTGGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATCTACACACAGACCTCCGATACACAGCATTCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACTATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCGAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGCTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGCTATCACACACTATTCTGCACGCGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGGTTTGACGTTGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAATGTACCATTACAGCTGGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGATGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTGCACACTTGATTCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTACTTTGTTAAAATTGGAAGACCACAAAAATGTGAATGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCTGTTTATGCTTGCTTCAAGCATGCATTAGGATGTGATTATTTATATAACCCTTACTGCATTGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCTTTTATTGACAATGAAGAAAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAATCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATTCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAACAATGTTAGATGTCTGGATTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGATACTCGCACTCGCTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTCAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTACGCCATTCTTTTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAAACTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAATGTCGTTAAGAAAGGTGCCTTCACCGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACAAATGTAGCTTTTGAGTTATATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAATTTAGGTGTTGTCGCAACATATAATTTTGTGTTGTGGGATTATGAAGCTGAACGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCCTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAATTACAATATGGCCTTTTGAATGATCTACCTGTAAGTACTGTTGGAAATAAACCTGTCACATGGTATATCTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACCTTTGAAACCTTCAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTCGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTCTCTAAAACTACCATCGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCTGTTCAAGAATTTATGAATAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGAACCCCGGTTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGATAAGTTTGATTTGCTCGTTTCTGATTTATATGATGGCTCCACAAAATCAATTGACTGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAACACACCA >67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ATGAGTTCCAAACAATTTAAGATCCTCGTTAATGAGGACTACCAAGTCAACGTGCCTAGTCTTCCTTTCCGTAACGCTTTGCAGGAAATTAAGTACTGCTACCGTAACGGTTTTGAGGGCTATGTTTTCGTACCTGAATACCGTCGTGACCTAGTTGATTGCGATCGTAAGGATCACTACGTCATTGGTGTTCTGGGTAACGGAATAAGTGATCTTAAACCTGTTCTCCTTACCGAACCTTCCGTCATGTTGCAAGGCTTTATTGTTAGAGCTGGCTGCAATGGCGTTCTTGAGGACTTTGACCTTAAAATCGCCCGTACTGGAAATGGCGCCATATATGTAGATCAATACATGTGTGGTGCGGATGGAAAACCAGTTATTGAAGGTGAGTTTAAGGATTATTTCGGTGATGAGGACGTTATCATCTATGAAGGAGAGGAGTACCATTGTGCCTGGCTAACAGTGCGCGATGAAAAACCTTTATGTCAACAAAATCTCCTCACAATTAGGGAAATCCAATACAATCTGGACATCCCACATAAGTTGCCTAATTGTGCTATCAGAGAGGTAGCACCACCAGTCAAGAAGAATTCCAAGGTTGTTCTTTCTGAAGAGTATAAAAAGCTCTATGACATCTTTGGTTCACCATTTATGGGCAATGGGGACAGTCTTAACAAGTGTTTTGACAGCCTCCACTTCATTGCTGCCACTCTTAAGTGTCCTTGTGGCGCCGAGAGTAGTGGTGTTGGTGATTGGACTGGTTTTAAGACTGCTTGTTGTGGTCTTCAAGGCAAAGTTAAAGGCGTCACATTAGGTGCTGTTAAACCAGGTGATGCCGTTGTCACTAGCATGAGTGCAGGTAAGGGTGTAAAATTCTTTGCTAATAGTGTACTCCAATATGCTGGTGATGTGGAAAATGTCTCTGTTTGGAAAGTGATTAAAACTTTCACTGTTAATGAGACTGTCTGCACCGCTGATTTTGAAGGCGAATTGAACGACTTCATTAAACCAGAGAGTACTTCACCTGTTTCATGTTCTATTAAGAGAGCGTTCATCACTGGTGAGGTTGATGATGCAGTCCATGACTGTATTATCTCAGGAAAGTTGGACCTTAGTACTAACCTTTTTGGTGGTGCTAACCTGCTTTTCAAGAAAACGCCCTGGTTTGTGTTAAAGTGTGGTGCTATTTTTGCTGATGCTTGGAAAGTTGTTGAAGAACTGCTTTGTTCTCTCAAACTTACATACAAGCAAATCTATGATGTAGTAGCATCACTTTGCACTTCTGCCTTTACTATTATGGATTACAAACCTGTATTTGTAGTTGCATCTAATAGTGTTAAGGATCTCGTTGACAAGTGTGTCAAAATTCTTGTGAAAGCCTTTGATGTTTTCACACAGACAATTACCATTGCGGGTGTGGAGGCTAAGTGCTTTGTGCTTGGCTCTAAATACTTGCTTTTTAATAATGCACTTGTTAAGCTTGTCAGCGTTAAAATACTTGGCAAGAGGCAGAAAGGTCTTGATAGTGCATTCTTTGCCACTAATTTGATTGGTGCTACTGTTAAGGTGACACCACAAAGAACTGAGGCAGCCAATATTAGTTTGAATAAAGTAGATGATGTTGTCACACCTGGTGAAGGTCATATTGTCATTGTAGGCGACATGGCTTTTTACAAGAGTGGAGAGTACTACTTTATGATGGCAAGTCCTGATTCAGTTCTCATTAATAACGTTTTTAAAGCAGCTCGAGTGCCATCTTATAACATTGTTTACAATGTGGATGATGATACCAAGAGTAAGATGTCATCTAAAATTGGAACGCCATTTGAATTTGATGGTGATGTGGATGCTGCTATTGTTAAGATTAACGACTTACTTGTTGAGTTTAGACAAGAAAAGTTTTGTTTCAGAGCACTTAAGGATGGTGAAAGTATCTTGGTTGAGGCATACCTTAAGAAATATAAAATGCCAATTTGTCTCAAAAATCATGTTGGTTTATGGGACATCATAAGACGCGATTCTGATAAGAAGGGTTTTCTTGACACTTTCAGTCATCTTAATGAATTGGAGGATGTCAAGGATGTAAAAATTCAGTCTATTAAAAATATCCTTTGCCCTGACCTTCTGTTAGAATTAGATTTTGGTGCAATTTGGTATAGATGTATGCCAGCCTGCTCTGATGTGTCTATTTTGGGTAATGTTAAAATCATGCTAGGTAATGGTGTTAAAGTGATTTGTGATGGCTGCCATGGTTTTGCTAACCGTTTAACGGTTAATTACAGCAAACTGTGTGACACAGCTCGTAAAGACATTGAAATTGGTGGTATACCATTTTCCACCTTTAAAACACCATCTAGCAGCTTCATTGACATGAAAGATGCCATCTATTCTGTGGTTGAATACGGTGAAGCATTTTCCTTTAAGACTGCAAGTGTACCTGTAACTAATAGTGGTACTGTCAAAAATGACGACTGGTCAGACCCCATTTTGTTAGAACCTGCAGATTATGTCGAACCTAAAGATAACGGTGATGTAATTGTCATTGCTGGATACACCTTTTACAGGGATGAGAACGATCACTTTTATCCATATGGTTCCGGCATGGTTGTGCAGAAGATGTACAACAAGATGGGTGGTGGTGACAAGTCAGTTTCATTTTCAGACAACGTTAATGTTAAAGAGATAGAACCTATTACACGTGTCATGCTAGAATTTGAATTTGACAATGAGGTGGTAACACAGGTTCTTGAAAAAGTCATTGGTGCCAAATATAAGTTTACAGGTACCACTTGGGAAGAATTTGAAGATTCTATTTCTGAGAAACTTGACAAGGTTTTCGACACGCTTGCTGAACAGGGTGTAGAACTTGAAGGTTACTTCATTTATGACACTTGTGGCGGATTTGACATTAATAATCCAGATGGTGTTATGATTTCACAGTATGATCTTAACTCAGCTGTTGATGTCAAAAGTGATTCTGATGCAAGCGTGGAAGACACATCTTCGATTTCTGATAACGAAGATGTTGAACAAATAGAAAAAGAGAACGTCTCAGCTGCTGATGTTACAGTTGTAGATGTTGAAGAATTTGTTGAGCAAGTTTCTCTTGTTGACACCGAAGAACAACTCCCCTCAGTAGAGGAAAAAGTTGAAGGCTCTGCTAAAGATGACCCGTGGGCTGCTGCTGTTGATGAACAGGAAGCTGAACAACCTAAACCTTCCTTAACTCCATTTAAGACAACAAATCTTAATGGTAGAATTATTCTTAAACAACAAGATAACAATTGTTGGATAAACGCTTGCTGTTACCAGTTGCAAGCTTTTGACTTTTTCAACCATGAATTATGGGATGGTTTTAAGAAAGATGACGTTATGCCTTTCGTAAACTTCTGTTATGCAGCTCTAACTTTGAAGCAGGGTGATTCAGGAGACTCAGAATACCTTTTGGAGACGATGCTCAATGATTATAGTACAGCTAAAGTTGTTCTTAGTGCTAAGTGTGGCTGTGGTGTTAAAGAAATAGTTTTAGAGCGAACTGTGTTTAAGCTCACACCTCTTAAGAATGAGTTTAAATATGGTGTCTGTGGTGACTGTAAACAAATTAACATGTGTAAGTTTGCAAGCGTGGAAGGTTCAGGTGTTTTTGTTCATGATAGA---ATTGAAAAACGAACACCTGTGTCACAATTCATTGTGACACCTATTATGCACGCAGTTTACACAGGTACAACACAGAGTGGTCATTACATGATTGAGGATTGCACTCATGATTATTGTGTGGATGGTATGGGAGTTAAACCCCGTAAACAAAAGTTTTACACATCCACCTTGTTTCTTAATGCAAATGTAATGACA---------------------------------------GCTGACTCTAAAACTACAATCGAACCAACTGCACCTGTTAAGGATAAGCTTGTAGAAGAATGTCAAAGTCCTAAAGACTTTATATTACCCTTTTACACAGCGGGGAAAGTGTCATTTTACCAAGGAGATTTGGATGTTTTGATTAACCTTCTTGAACCTGACGTTGTTGTTAACGCTGCTAATGGTGATCTTAGGCACATGGGTGGTGTTGCTAAAGCCATTGATGTGTTCACAGGTGGTAAGTTGACGAAACGTTCTAAAGAATATCTTAGGACTAATAAAACAATAGCTCCTGGTAATGCTGTGCTTTTTGAAAACGTACTTGAGCATCTTAGTGTATTGAATGCTGTCGGACCACGTAATGGTGACAGTAGAGTTGAAGGTAAACTCTGTAACGTTTACAAAGCAATTGCCAAGTGTGACGGTAAGATATTAACACCACTTATTAGTGTTGGTATCTTCAAAGTCAAACTGGAAGTTTCATTGCAGTGTCTACTTAAAACTGTCACAGATAGGGAATTAAATGTCTTTGTTTACACTGACCAAGAGAGAATTACCATAGAAAATTTCTTCAATGGTACTATTCCTGTCAAGGTAACGGAAGACACTGTGAATCAAAAGCGTGTGTCTGTGGCACTTGATAAAACTTATGGTGAGCAACTCAAAGGCACTGTTGTTATTAAAGACAAAGATGTTACTAACCAGTTGCCAAGTGTGTCAGATGTTGGTGAAAAAGTCGTTAAGGCATTGGATGTTGATTGGAATGCTTACTATGGCTTTTCAAATGCAGCGGCTTTTAGTGCCAGTTCCCATGATGCTTATATATTTGAAGTTGTAACACACAACAACTTCATTGTTCATAAGCAGACTGATAATAATTGTTGGGTTAATGCAATTTGTTTAGCATTACAAAGGCTTAAACCAACATGGAAGTTTCCTGGTGTTAAAAGTTTGTGGGATGATTTTCTTGTTCGTAAAACTGCTGGATTTGTCCACATGCTATACCACATTTCAGGCTTAAAGAAAGGACAACCTGGTGATGCTGAGTTGACTTTACATAAGCTTGGTGAGTTGATGTTGAGTGATAGTGCTGTCACCATCACACATACAACTGCATGTGACAAGTGTGCAAAAACTGAAACTTTTACAGGCCCTGTGATAGCAGCACCTCTTCTGATCCATGGCACTGATGAAACCTGTGTTCATGGTGTAAGTGTTAATGTTAAAGTGACAAGTGTTAGAGGCACTGTGGCTATCACTTCCTTAATCGGTCCTGTTGTAGGAGATGTTATTGATGCAACTGGTTATATTTGTTATACTGGATTGAACTCACGTGGTCATTATACCTATTATGATAATCTTAATAGTTTAATGGTTGATGCTGAAAAGGCCTATCATTTTGAGAAAAACCTCTTACAGGTTACAACAGCCATTGCTAGTAATTTTATTGCCTACACACCTAAGAGTGAGATCTATCCTAAGGTTCAACCAGTTAAAGAATCACATACAGCTCGTGTTTTTAGTGAGGTTGAAGAAATTCCTAAAAATGTAGTTCGTGAAACAAAATTGCTAGCTATTGAGAGTGGTGCAGATTACACACTCTCAACACTTGGTAAATATGCTGATGTTTTCTTTATGACCGGTGATAAAATTCTTAGGTTTCTCCTTGAAGTCTTTAAATATTTATTGGTTGTTTTTATGTGTCTTAGAAAATCTAAGATGCCTAAAGTTAAGGTAAAACCACCGCATGTATTCAAAAACTTAGGTGCTAAAGTTAGGACATTGAATTACGTAAGACAATTGAACAAACCAGCGTTATGGCGTTACGTAAAACTAGTGTTACTTTTAATAGCATTGTACCACTTTTTCTACTTGTTTGTTAGTATACCAGTAATGCACAAATTAGTGTGTAGTAGTAGTGTACAAGCGTATAGTAATTCTAGTTTTGTGAAATCAGAAGTTTGTGGTAATTCTATTCTATGCAAGGCGTGTCTGGCATCTTATGATGAATTGGCTGATTTTGATCATCTTCAGGTGTCATGGGATTATAAGTCGGATCCGCTATGGAATAGAGTTATACAATTGTCTTACTTCACATTCTTGGTTGTTTTTGGCAATAATTATGTTAGATGTCTTCTTATGTATTTTATCTCTCAGTACCTTAACTTGTGGTTGTCTTATTTTGGTTATGTTAAGTATAGTTGGTTTTTGCATGTCATCAACTTTGAATCAATTTCTGTTGAATTTGTGATCATAGTTGTAGTTTTTAAGGCAGTTCTCGCACTTAAACACATCTTCTTTTCATGCAATAACCCATCATGTAAGACTTGTTCTAAGATTGCTAGGCAGACACGTATTCCTATACAAGTTGTGGTTAATGGTTCAATGAAGACTGTGTATGTCCACGCTAATGGTACTGGTAAACTCTGCAAAAAGCATAATTTCTACTGTAAAAATTGTGACTCTTACGGTTTTGACCACACATTCATCTGTGACGAGATTGTGCGTGACCTGGGTAACAGTATCAAGCAAACTGTTTATGCCACTGATAGATCATACCAGGAAGTCACAAAGGTTGAATGCTCTGATGGCTTTTACAGGTTTTATGTTGGTGATGAATTCACGGCATACGACTATGATGTAAAAAACAAGAAGTATAGTAGCCAGGAAGTGCTTAAAACTATGTTCCTGCTTGATGACTTCATCGTCTATAGTCCATCAGGGTCTTCCCTCGCTAGTGTTAGAAATGTCTGTGTTTATTTTTCACAACTGATTGGTAGGCCTATTAAAATTGTTAATAGTGAACTTCTTGAGGATTTATCTGTAGACTTTAAGGGATCACTTTTTAATGCTAAGAAAAATGTTATTAAAAACTCTTTTAATGTTGATGTGTCAGAATGTAAAAACCTTGAAGAGTGTTATAAAGCATGCAACCTTGATGTGACATTTTCTACTTTTGAAATGGCTGTTAATAACGCTCATAGATTTGGTATATTGATTACAGACCGCTCCTTTAACAATTTTTGGCCATCAAAAATTAAGCCAGGTTCTTCTGGTGTCTCTGCTATGGACATTGGTAAGTGCATGACTTTTGATGCAAAGATTGTTAATGCAAAGGTTTTAACGCAACGAGGTAAAAGTGTTGTATGGCTTAGTCAGGACTTTTCTACTCTTAGTTCTACAGCACAGAAAGTTTTAGTTAAAACTTTTGTAGAAGAAGGTGTGAACTTTTCACTAACGTTTAATGCTGTGGGTTCAGATGAAGACCTCCCCTATGAGAGATTCACTGAATCAGTTTCACCAAAGAAAGGTTCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAGATCTTCTGGTGTTTGGTTTTGTTTATTACCTTGTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGATGGTTATGAATACATGGTTATTAAGAATGGCATTGTTCAACCATTTGATGATTCTATTAACTGTGTACATAACACATACAAAGGCTTTGTTATGTGGTTTAAAGCTAAATATGGTTTTGTACCTACATTCGACAAGTCTTGTCCTATTGTTTTAGGAACTGTTTTTGACTTAGGCAATATGAGACCAATCCCTGATGTGCCAGCTTATGTAGCACTTGTTGGTAGATCCCTAGTGTTTGCGATTAATGCAGCATTTGGTGTTACTAATGTTTGTTATGATCATACAGGTTCTGCTGTGAGTAAAAACTCTTATTTTGATACCTGTGTATTTAATGCTGCTTGCACCACTCTATCAGGCCTTGGAGGTACAATTGTTTATTGTGCCAAACAAGGACTTGTGGATGGTGCTAAACTTTATAGCGAATTGATGCCTGACTATTTTTATGAGCACGCTAGTGGTAACATGGTTAAAATACCAGCCATTATTAGGGGTTTTGGTCTGAGATTCGTAAAAACACAGGCTACAACTTATTGCAGAGTAGGGGAGTGTGTTGAAAGTCAGGCCGGTTTTTGCTTTGGTGGTGACAACTGGTTTGTTTATGATAAAGAGTTTGGTGATGGTTATATTTGTGGAAGCTCTACATTGGGTTTTCTCAAAAATGTCTTTGCTCTCTTTAACTCTAACATGTCTGTAGTAGCCACATCCGGTGCTATGTTGGTTAACATTATCATCGCATGTTTGGCTATAGCGGTCTGTTATGGTGTTCTTAAATTTAAGAAAATCTTTGGTGATTGTACTCTCCTAGTTGTTATGATTATTGTTACATTGGTTGTTAACAATGTTTCTTATTTTGTGACCCAAAACACATTCTTTATGATTGTTTATGCCATTATTTATTACTTTACAACAAGGAAATTATCATACCCTGGTATCTTGGATGCAGGATTCATTATTGCCTATGTGAACATGGCCCCATGGTATGTGCTTGTGCTGTACATAGTGGTCTTCTTATATGATTCTCTACCCTCACTATTCAAACTTAAGGTTACAACAAACCTTTTTGAAGGGGATAAATTTGTTGGTAGTTTTGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAGACACTTGTTAATTCTACATCCTTGGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTACAAGTACTATACTGGTTCAATGGGAGAGGCCGATTACCGCATGGCTTGTTATGCTCATTTAGGTAAGGCATTAATGGATTATTCAGTCTCAAGAAATGATGTTCTTTACACACCACCAACGGTCAGTGTTAATTCAACATTACAGTCAGGACTGAGAAAAATGGCACAGCCTAGTGGTATTGTGGAACCCTGCATTGTGAGGGTAGCCTATGGCAATAATGTGCTTAATGGTTTGTGGCTTGGAGATGAAGTTATCTGCCCTAGACACGTCATTGCAAGTGACACATCACGTGTGATCAATTATGACAATGAGTTGTCCGGTGTGCGGTTACATAAATTCTCTATAGCCAAAAATAATGTGTTTTTGGGCGTTGTGTCTGCCAAGTATAAGGGTGTGAACCTTGTGCTTAAGGTTAATCAGGTAAACCCCAACACACCAGAACACAAATTCAAATCCGTGAAGTCTGGTGAGAGTTTTAACATTCTCGCTTGTTATGAAGGCTGTCCCGGTAGTGTCTACGGTGTGAACATGAGAAGTCAGGGTACCATCAAAGGTTCATTTATTGCTGGTACCTGTGGGTCAGTAGGTTATGTATTAGAAAATGGAATACTCTATTTTGTGTACATGCACCACTTAGAATTAGGTAATGGCTCTCATGTTGGTTCAAACCTTGAGGGGGTAATGTATGGCGGTTATGAAGATCAACCTAGCATGCAATTGGAGGGTACTAACGTCATGTCATCAGATAATGTAGTTGCATTTTTGTATGCTGCTCTTATTAATGGTGAAAGATGGTTTGTTACAAATGCATCAATGACGTTAGAATCTTACAATGTATGGGCCAAAACCAACAGTTTTACGGAACTTGTTTCAACTGATGCTTTTAATATGTTGGCTGCAAAAACTGGTTATAGTGTTGAGAAGTTGCTTGAATGTATTGTTAGACTCAACAAAGGTTTTGGAGGACGCACTATACTCTCTTATGGTTCATTGTGTGATGAATTCACACCTACGGAAGTTATAAGGCAAATGTATGGTGTTAATCTTCAGAGTGGTAAAGTGAAATCTCTCTTTTACCCTGTGTTGACAGCCATGGCTATTCTATTTGCTTTTTGGTTAGAGTTCTTTATGTACACACCCTTTACATGGATTAATCCATCGTTTATCAGTGTTATTCTAGCTATTACAACTTTTTTCTCTGTGTTATTAGTTGTTGGGATTAAACACAAAATGTTATTCTTTATGTCTTTTGTAATGCCTAGTGTTGTGTTGGCCACCGTTCATAATGTTGTATGGGATATGACTTATTATGAAAGCTTACAAGCTCTTGTGGCGAACACTAACACAACATTTTTACCAGTAGATATGCAAGGCGTTATGCTTGCTTTGTTCTGTGTTGTTGTGTTTGTTACATACACTATAAGATTCTTTACATGCAAGCAATCCTGGTTTTCTTTATTTGTAACAACTGTCTTTGTGGTGTTCAACATTGTTAAGTTGCTAGGCATGGTAGGTGAACCATGGACTGAAGATCACATCTTGTTATGTCTTGTAAACATGCTTACCATGTTGATAAGTCTTACTACAAAGGACTGGTTTGTTGTTTTTGTATCATACAAATTTGCTTATTATGTCGTTGTTTATGTAATGCAACCATCCTTTGTTCAAGACTTTGGGTTTATTAAGTGTGTAAGCGTGATTTACATGGCATGTGGTTATTTGTTTTGCTGTTATTATGGTATTCTTTACTGGGTTAACAGATTTACATGCATGACGTGTGGTGTTTACCAATTCACTGTCTCACCGGCAGAGCTCAAGTATATGACTGCTAACAATTTGTCAGCACCTAAGACCGCATATGATGCCATGATTCTTAGTGTTAAATTGATGGGTATAGGTGGAGAGAGAAATATAAAAATCTCCACTGTACAGTCTAAACTCACAGAGATGAAATGCACAAACGTTGTGCTGCTTGGGCTTTTGTCTAAAATGCATGTTGAATCTAACTCAAAGGAGTGGAATTATTGTGTTGGGCTGCATAATGAGATTAATTTGTGTGATGACCCCGAAGTGGTTCTTGAAAAACTACTTGCACTCATCGCATTCTTTTTATCCAAACACAATACATGTGATCTTAGTGACCTTATCGACTCCTATTTTGATAACACCACTATTTTACAGAGTGTGGCTTCTGCTTATGCTGCTTTACCTAGCTGGATTGCATATGAAAAAGCTCGCGCGGATTTAGAAGAGGCTAAGAAAAATGATGTTAGTCCACAATTATTGAAACAGCTTACAAAAGCATGCAATATTGCTAAGAGTGAGTTTGAACGCGAGTCCTCGGTTCAAAAGAAGCTTGATAAAATGGCCGAGCAAGCTGCAGCTAGTATGTACAAAGAGGCAAGGGCTGTTGACAGAAAATCAAAAATAGTTTCTGCTATGCATAGTCTTCTTTTTGGTATGCTCAAGAAACTTGATATGTCCAGTGTTAATACTATTATTGAACAGGCCCGTAATGGTGTGTTGCCCCTGAGTATCATACCTGCTGCAGCAGCCACAAGACTTATTGTTGTAACACCTAATATTGAAGTGCTTTCCAAAATTAGGCAAGAAAACAATGTCCACTATGCAGGTGCTATCTGGTCAATTATTGAAGTCAAGGATGCTAATGGTGCTCAAGTCCATTTAAAAGAAGTCACAGCTGCCAATGAGTTGAACCTGACCTGGCCTTTGAGTATTACATGTGAGAGAACCACAAAGTTGCAAAACAATGAAATTATGCCAGGTAAACTTAAAGAGAAGGCTGTTAAAGCGTCTGCTACAATTGATGGTGATGCTTATGGTAGTGGTAAGGCCCTCATGGCTTCTGAAAGTGGTAAGAGCTTTATATATGCATTTATAGCGTCTGACAGCAACCTTAAGTATGTTAAATGGGAGAGCAATAATGATGTAATACCCATTGAACTTGAGGCCCCATTGCGCTTTTATGTAGATGGTGCTAATGGCCCTGAAGTTAAGTATCTTTACTTTGTGAAGAACTTGAACACTCTTAGACGTGGTGCTGTTCTGGGTTATATTGGCGCTACTGTTCGTTTGCAGGCTGGTAAACCTACTGAACACCCATCTAACAGTGGTTTATTAACCTTGTGTGCTTTCGCTCCTGACCCTGCTAAGGCATACGTTGATGCTGTTAAGAGAGGTATGCAGCCAGTTACTAATTGTGTGAAAATGCTCTCAAATGGTGCTGGTAATGGTATGGCTATTACAAATGGTGTAGAGTCTAATACGCACCAAGACTCTTATGGTGGTGCATCTGTGTGCATCTATTGTAGGTGTCATGTAGAACATCCTGCAATTGATGGATTGTGTCGTTATAAGGGTAAATTTGTTCAAGTACCAACCGGCACTCAAGATCCTATTAGATTTTGTATTGAAAATGAAGTCTGTGTTGTTTGTGGTTGCTGGCTTAATAATGGTTGCATGTGTGATCGTACTTCTATGCAAGGCACAACTGTTGACCAGAGTTATTTAAACCGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCACGTTAGTAGAGCTTTTGACATCTATAATAAAGATGTTGCATGTATTGGTAAATTCCTTAAGACTAATTGTTCCCGTTTTAGGAATTTGGACAAACGTGATGCCTACTATGTTGTCAAGCGTTGTACTAAGAGCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCAGTTGCTGAACATGACTTCTTTTTGTATAAGGAAGGTCGATGTGAATTCGGCAACGTCGCACGTAAGGATCTTACAAAGTACACTATGATGGATCTATGTTATGCCATTAGGAATTTTGATGAAAAGAATTGCGAAGTTCTTAAAGAAATACTCGTGACATTAGGTGCCTGCAATGAATCCTTCTTTGAAAATAAAGATTGGTTTGACCCAGTGGAAAATGAAGCTATACATGAGGTGTACGCAAGACTTGGACCTATAGTAGCCAACGCTATGCTTAAATGTGTAGCGTTTTGTGATGCTATCGTGGAGAAAGGTTACATAGGTATTATTACACTTGATAACCAAGACCTTAATGGTAATTTTTACGACTTCGGTGATTTCGTAAAGACAGCGCCTGGTTTTGGATGTGCTTGCGTGACGTCATATTATTCTTATATGATGCCCTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAATTTTGTGAAAAGTGACATTTATGGTTCTGATTATAAGCAGTATGATTTGCTAGCTTATGATTTTACAGACCATAAAGAAAAGCTGTTCGAAAAATATTTCAAACACTGGGACCGCACATACCATCCTAACTGCTCTGATTGTACAAGTGATGATTGTATCATTCATTGTGCTAATTTTAACACATTGTTTTCAATGACCATACCCAACACTGCTTTTGGACCTCTTGTACGTAAAGTCCACATAGATGGTGTGCCAGTTGTTGTTACTGCTGGTTACCATTTTAAACAGTTGGGTATTGTGTGGAATCTTGATGTTAAATTAGACACTATGAAGTTGACTATGACAGATCTTCTTAGGTTCGTCACTGACCCTACATTACTTGTAGCATCAAGCCCTGCATTGTTAGATCAGCGCACTGTCTGTTTTTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTGAAACCAGGTCACTTTAACAAGGATTTCTACGATTTTATAACAGAGCGTGGATTCTTTGAGGAGGGATCTGAGTTGACGTTGAAACATTTCTTCTTTGCACAGGGTGGTGAAGCCGCTATGACAGATTTTAACTACTACCGTTATAACAGAGTTACTGTTTTAGACATCTGTCAGGCGCAATTTGTTTATAAAATTGTGTGTAAGTACTTTGATTGTTACGATGGTGGCTGCATCAATGCTCGAGAGGTTGTTGTTACCAACTACGACAAGAGTGCTGGTTATCCACTTAATAAATTTGGTAAGGCAAGACTTTACTATGAGACTCTGTCATATGAGGAGCAGGATGCGATTTTTGCATTAACAAAGAGAAATGTTCTACCCACAATGACACAAATGAATTTGAAATATGCTATATCTGGAAAGGCTAGAGCTCGCACTGTAGGAGGAGTGTCACTCCTTTCGACAATGACTACGAGACAATACCACCAGAAGCATTTAAAGTCTATTGCTGCTACACGTAATGCCACTGTCGTTATTGGAACGACTAAGTTCTACGGTGGCTGGGATAATATGTTAAAGAATTTGATGCGTGATGTAGATAACGGCTGTTTGATGGGATGGGACTATCCAAAGTGCGACCGTGCTTTGCCTAATATGATACGAATGGCTTCTGCAATGGTATTGGGTTCTAAGCACATTGGGTGTTGTACACATAGTGATAGGTTCTATCGCCTCTCTAACGAGTTAGCTCAAGTACTTACAGAGGTTGTGCATTGCACAGGTGGTTTTTATATCAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAATTCGGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGACTCAAACACCTGTAACAATGTTACAGTTAAGTCCATACAACGCAAGATATATGATAATTGTTATCGAAGTAGCAGTGTTGATGATGACTTCGTTGTTGAGTATTTTAGCTATTTAAGAAAGCACTTTTCTATGATGATTTTGTCAGATGATGGCGTGGTTTGTTACAACAAAGACTATGCTGATCTTGGTTATGTAGCAGACATTAGTGCTTTTAAAGCTACTTTGTATTACCAGAATAATGTTTTTATGTCTACAGCCAAGTGTTGGGTAGAACCAGACCTTAATGTTGGACCACACGAATTTTGTTCACAACACACACTACAAATTGTAGGAGCGGATGGTGATTATTATTTACCATACCCAGACCCTTCTAGAATCTTGTCAGCAGGTGTTTTCGTTGATGACATCGTTAAAACAGATAACGTCATTATGCTTGAACGTTATGTGTCTTTAGCAATCGATGCGTATCCACTTACAAAACACCCTAAACCCGCATATCAAAAAGTGTTTTATGCATTGTTAGATTGGGTTAAACATTTACAGAAGACTCTAAATGCTGGTATACTTGATTCATTTTCTGTCACTATGTTGGAGGATGGTCAAGATAAATTCTGGAGTGAAGAGTTCTATGCCAGTCTTTACGAAAAGTCTACTGTTTTGCAAGCTGCCGGTATGTGTATTGTTTGTGGTTCACAAACTGTGTTACGTTGCGGAGACTGTTTAAGGAGACCTCTTTTATGCACTAAGTGCGCTTACGACCATGTCATGGGTACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGCTATAATGGTTGTACTGTTAATGATGTAACAAAATTGTTTTTGGGAGGTCTTAACTATTATTGTACTGAACATAAACCACAATTGTCATTCCCGCTCTGTGCTAATGGCAATGTGTTTGGTCTGTACAAGAGTAGTGCAATTGGTTCTGAGGACGTTGACGATTTCAATAAACTTGCAATCTCGGACTGGACCAATGTAGAAGATTACAAACTTGCTAATAATGTCAAAGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCAAAGGAGGAGTCTGTTAAAGCTGAATATGCTTATGCCATATTAAAGGAGGTGGTCGGCCCTAAGGAAGTTGTACTCCAATGGGAATCCTCTAAGGTTAAACCTCCACTTAACAGAAATTCTGTTTTCACATGTTTTCAGCTAAACAAGGATACTAAAATTCAGTTAGGTGAATTTGTGTTTGAGCAGTCAGAGTATGGTAGTGAATCTGTTTACTACAAGAGTACTAGCACTACTAAGCTGACACCGGGTATGATTTTTGTGTTGACATCTCATAACGTGAGTCCACTTAAAGCTAATATCTTAGTCAACCAAGAGAAGTACAATACCATATCCAAGCTCTATCCTACGTTCAACATAGCGGAAGCCTATACCACATTGGTGCCTTACTATCAAATGATTGGTAAGCAAAAGTTTACAACTATCCAAGGTCCTCCTGGTAGTGGTAAATCACATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAAGCTAGGATCGTCTACACAGCATGTTCACATGCTGCTGTGGATGCATTGTGTGAAAAGGCTTCTAAGAACTTTAATGTGGATAAGTGTTCAAGGATAATACCCCAAAGAATCAGAGTTGACTGCTATATGGGTTTTAAACCTAATAATACTAATGCACAGTACTTGTTTTGTACAGTTAATGCTTTACCTGAAGCTAATTGCGACATCGTAGTTGTGGATGAAGTCTCAATGTGTACAAATTATGATCTCAGTGTTATAAATAGTAGACTGAGTTACAAGCACATTGTTTACGTGGGAGACCCACAACAGCTTCCAGCTCCTAGAACCTTGATTAATAAGGGTACACTCCAGCCTGAAGATTACAATGTTGTAACCCAGAGAATGTGTAAACTAGGACCTGATGTATTTTTGCATAAATGCTATAGATGCCCAGCTGAAATTGTTAAGACAGTCTCCGCGCTTGTTTATGAGAATAAGTTTTTGCCTGTCAACCCAGAGTCAAAGCAGTGCTTTAAAATGTTTGTAAAAGGTCAGGTGCAGATTGAATCCAACTCTTCTATAAACAATAAGCAACTAGATGTTGTTAAGGCATTCCTAGCACATAATCCAAAATGGCGTAAAGCCGTTTTTATCTCACCCTATAACAGTCAGAACTATGTCGCAAAACGTCTACTCGGTTTGCAAACACAAACGGTAGACTCTGCTCAAGGTAGTGAGTATGATTATGTCATTTACACACAGACTTCTGATACGCAGCATGCTATTAATGTCAACAGGTTTAATGTTGCCATTACTAGAGCAAAGGTTGGTATTCTCTGTATCATGTGTGATAGAAAGATGTATGACAATCTTGATTTCTATGAACTCAAAGATTCAAAAGTTGGCTTGCAAGCAAAACCTGAAGCGTGTGGTTTGTTCAAAGATTGTTCAAAGACTGATCAATACATACCACCAGCATATGCTACAACATATATGAGTCTGTCTGAAAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAGGATGTTAAATATGCTAATGTTATCTCATATATGGGATTCAGGTTTGAGGCCAATGTACCAGGCTATCACACATTGTTTTGCACACGAGACTTTGCTATGCGTAATGTGAGATCATGGTTAGGGTTTGATGTCGAAGGTGCACATGTCTGTGGTGATAACATCGGAACTAATGTACCACTACAGCTGGGTTTTTCAAATGGTGTAGATTTTGTAGTACAAACTGAGGGATGTGTTGTTACTGAGAAAGGTAATAGTATTGAGGTTGTAAAGGCAAGAGCACCACCGGGTGAGCAATTTGCACATTTGATTCCACTTATGAGAAAAGGTCAGTCTTGGCACATTGTTAGACGTCGTATAGTGCAGATGGTTTGTGACTATTTCGACGGTTTATCTGACATCCTAATTTTCGTGCTTTGGGCTGGTGGTCTTGAGCTTACAACTATGAGATACTTTGTTAAAATTGGAAAACCACAGAAATGTGATTGCGGCAAAATTGCAACGTGTTATAACAGCTCGCAGTGTGTCTATGCTTGTTTTAAACATGCATTAGGATGTGATTACTTGTACAATCCTTACTGCATTGATATTCAACAATGGGGTTATACAGGATCCTTGAGCATGAACCATCATGAAGTTTGTAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGGTGCCTTGCTATATATGATTGTTTTGTCAAGCGTGTAGATTGGTCCATTGTGTACCCATTTATTGATAATGAAGAAAAGATCAATAAAGCTGGTCGCATTGTACAATCACATGTCATGAGAACTGCTCTTAAGGTTTTCAACCCTGCTGCAATTCACGATGTTGGTAATCCTAAAGGTATTCGTTGTGCTACAACATCTATACCATGGTTCTGTTATGACCGTGATCCTATTAATAACAATGTTAGATGTCTGGAGTATGATTACATGGTACATGGACAAATGAATGGTTTAATGTTATTTTGGAATTGCAACGTAGACATGTACCCGGAGTTCTCGATTGTTTGTAGATTTGATACTCGAACTCGCTCAAAATTGTCATTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCATTTCACACACCAGCTTATGATAGAAGAGCATTTGCTAAGCTTAAACCTATGCCATTCTTTTACTACGATGAGAGTGATTGTGAGTTTATTGATGGACAACCTAATTATGTACCACTTAAAGCTAATGTCTGCATAACTAAATGCAACATAGGTGGTGCAGTCTGTAAGAAACATGCAGCACTTTACAGAGCATATGTTGAAGACTACAACACTTTCATACAAGCTGGTTTTACAATTTGGTGCCCTCAAAATTTTGATACATATATGTTGTGGCAAGGCTTTGTTAATAGCAAAGCACTCCAGAGTTTGGAAAACGTAGCCTTCAATGTCGTCAAGAAAGGTGCCTACGCTGATTTAAAAGGTGACTTACCAACAGCAGTTATAGCTGATAAGATCATGGTGAGGGATGGACCTACTGACAAGTGTATTTTCACAAATAAAACTAGTTTGCCTACGAATGTGGCTTTTGAGCTGTATGCAAAACGCAAACTTGGACTCACACCTCCGTTAACAATACTTAGAAATCTAGGTGTTGTCGCAACACATAAATTCGTGTTGTGGGATTATGAAGCCGAATGTCCTTTCTCAAACTTTACTAAGCAAGTGTGTGCGTACACTGATCTTGATGGTGAAGTTGTAACATGTTTTGATAATAGTATTAGTGGTTCTTTTGAACGCTTTACTACTACGAAAGATGCAGTGCTTATTTCTAATAACGCTGTGAGGGGACTCAGTGCCATTAAATTACAATATGGCTTTTTGAATGATTTACCTGTAAGTACTGTAGGAAACAAACCTGTCACATGGTACATCTATGTGCGCAAGAACGGTGAGTACGTCGAACAGATTGACAGTTATTACACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGACTTTTTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACATGTTGTATTCGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCACAAGTGCGCCTAGCAAAAATGGGTTTGTTTTCTGTCCAAGAATTTATGAGTAATTCTGACAGTACACTGAAAAGTTGTTGTATAACATACGCTGACGATCCGTCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTAGACGATTTTGTGACTATCGTTAAGGGCTTAGATCTTAACGTTGTGTCGAAAGTTGTGGATGTTATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAACTCACAAATTAAAACCTTCTATCCACAACTCCAGTCTGCTGAGTGGAATCCTGGCTATAGCATGCCTACACTTTACAAAATACAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAGTTACCTGACGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATATCTCAATACCACTACACTGTGTGTTCCACATAAAATGCGTGTTCTGCATTTGGGAGCAGCAGGTGCTAATGGTGTTGCCCCTGGTACCACTGTATTAAGAAGATGGTTGCCAGACGATGCCATATTGGTTGATAATGATATGAGGGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGACTGTACTAATCTTTATATAGAGGACAAATTTGATTTACTTATCTCTGATTTATATGATGGCTCAACCAAGTCTATAGACGGTGAAAACATGTCGAAAGATGGCTTCTTTACATATATTAATGGTTTTATTAATGAGAAGCTAGCGCTTGGAGGTTCTGTAGCCATCAAAATCACTGAATTTAGCTGGAATAAAAGTTTATATGAATTAATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACCTCGTCGTCAGAAGGTTTTCTGATAGGTATCAACTACTTAGGACCATACTGTGACAAGGCTATAGTGGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCCACAATTATGGCGTTGTCACACAACTCAGTCCTAGATACTCCAAAATTCAAGTGTCGTTGCAATAACGCACTTGTTGTTAATTTAAAAGAAAGAGAATTAAATGACATGGTTATTGGATTACTAAGGAAGGGTAAAATACTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAATCACTTTGTTAACACACCA >FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGCCACTATTGATCAGAGTTATTTAAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCACGTTAGTAGGGCTTTTGACATCTATAATAAAGATGTTGCATGTATTGGTAAATTCCTTAAGACTAATTGTTCTCGCTTTAGGAATTTGGACAAACGTGATGCCTACTACGTTGTCAAGCGTTGTACTAAGAGTGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCAGGTGCGGTTGCTGAACATGACTTCTTTTTGTACAAAGACGGTCGATGTGAATTTGGTAACGTTGCACGTAAGGATCTTACAAAGTACACTATGATGGATCTATGTTATGCTATCAGGAATTTTGATGAAAAGAATTGTGAAGTCCTTAAAGAGATACTCGTGACATTAGGTGCTTGCGATGAATCCTTCTTTGAAAATAAGGATTGGTTTGACCCAGTTGAAAACGAGGCTATACATGAAGTATACGCAAGACTTGGACCTATAGTAGCCAACGCTATGCTTAAATGTGTAGCGTTTTGTGATGCTATTGTGGAGAAAGGTTACATAGGTATTATCACACTTGACAACCAAGACCTTAATGGCAATTTTTACGATTTCGGTGACTTCGTAAAAACAGCGCCAGGTTTTGGATGTGCTTGCGTGACGTCATATTATTCCTATATGATGCCCCTAATGGGAATGACTTCATGTTTAGAGGCTGAAAATTTTGTGAAAAGTGACATTTATGGTTCTGATTATAAGCATTATGATTTGTTGGCTTATGATTTTACAGACCACAAGGAAAAGCTTTTCCAAAAATATTTCAAACACTGGGATCGTACGTACCACCCTAATTGTTCTGATTGTACAAGTGATGATTGCATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACTATACCTAATACTGCATTTGGACCGCTAGTTCGTAAAGTCCATATTGATGGTGTGCCAGTTGTTGTCACCGCTGGTTACCATTTTAAACAGTTAGGTATTGTGTGGAATCTTGATGTTAAATTAGACACTATGAAGCTAACTATGACTGATCTGCTTAGATTCGTCACTGACCCTACATTACTTGTGGCGTCGAGTCCAGCGTTGTTGGATCAACGCACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTGAAACCAGGCCACTTTAACAAAGATTTCTACGATTTTATAACAGAGCGTGGATTCTTTGAAGAGGGGTCTGAATTGACACTAAAACATTTCTTCTTTGCACAGGGTGGTGAAGCTTCTATGACGGATTTTAATTATTACCGTTATAACAGAGTTACCGTTTTAGACATCTGTCAAGCACAATTTGTTTATAAAGTTGTTTGTAAGTATTTTGAGTGCTATGACGGTGGCTGCATCAATGCTCGTGAGGTTGTTGTTACCAATTATGATAAGAGTGCTGGTTATCCACTCAATAAATTCGGTAAAGCTAGACTTTACTATGAAACTCTGTCATATGAAGAGCAGGATGCGCTTTTTGCTTTAACGAAAAGGAATGTTCTACCCACAATGACACAAATGAATTTGAAGTATGCTATTTCTGGAAAGGCAAGAGCTCGTACTGTCGGAGGAGTGTCGCTTCTCTCAACAATGACAACGAGACAGTACCATCAGAAGCATTTAAAATCCATCGCTGCTACACGTAATGCCACTGTTGTTATAGGAACTACCAAGTTCTATGGTGGCTGGGATAACATGTTAAAGAATTTAATGCGTGATGTAGACAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGATCGTGCTTTGCCTAATATGATAAGAATGGCTTCTGCTATGGTATTGGGCTCTAAGCATGTAGGTTGTTGCACGCACAGTGATAGATTCTACCGACTCTCTAATGAGTTAGCTCAAGTACTTACTGAGGTTGTACATTGTACAGGAGGGTTTTATATCAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAATTCGGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTCTGGGAGTTGACTCGAACACCTGTAATAATGTTACAGTTAAGTCCATACAGCGCAAGATTTACGATAATTGTTATCGCAGTAGCAGTGTTGATGATGACTTTGTTGTTGAATATTTTAGCTATTTAAGAAAGCACTTTTCTATGATGATTTTGTCAGATGATGGTGTTGTTTGTTACAACAAAGATTATGCAGATCTTGGTTATGTAGCAGACATTGCCGCATTTAAAGCCACCTTATATTATCAGAATAATGTGTTTATGTCCACAGCTAAGTGTTGGGTAGAACCAGATCTTAATGTGGGACCACATGAATTTTGTTCGCAACACACATTACAAATTGTAGGACCAGATGGTGACTACTATTTACCTTATCCAGACCCATCTAGGATTTTGTCAGCAGGTGTCTTTGTTGATGACGTCGTTAAGACAGACAACGTTATCATGCTTGAACGTTATGTGTCCTTAGCAATTGATGCATACCCACTGACAAAACACCCCAAGCCGGCCTATCAGAAAGTGTTTTACGCCTTGCTTGACTGGGTTAAACACTTACAGAAGACTTTAAATGCAGGCATACTTGATTCCTTCTCCGTTACTATGTTAGAGGATGGTCAAGATAAGTTCTGGAGTGAGGAGTTTTACGCAAGTCTTTATGAAAAGTCCACCGTTTTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTCTACTGTTGATCAGAGTTATTTAAACCGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTATAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACAAATTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTAACTACAAGGAGGGTAGATGCGAGTTTGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTATGCTATTAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCTTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACACGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGTGATGCAATAGTGGAAAAAGGCTATATAGGTATTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGAGATTTCGTGAAAACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTTACTGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATACCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTATTTTCTATGACAATACCAATGACTGCTTTCGGACCACTTGTCCGTAAAGTTCACATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGACGTAAAATTAGACACAATGAAGTTGAGCATGACTGATCTTCTCAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTGAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACATTTCTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTACCGCTACAACAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTACGACGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGACAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTCTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCCACTGTTGTCATTGGTTCAACCAAGTTTTATGGTGGCTGGGACAACATGCTTAAAAATTTAATGCGTGATGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGCGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTGGGTTCTAAGCATGTTGGTTGTTGTACACATAGTGATAGGTTCTATCGTCTCTCCAATGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTCCAAGCTGTTTCTGCCAATGTTAATAAGCTTTTGGGGGTTGATTCAAACGCTTGTAACAATGTTACAGTAAAGTCCATACAACGTAAAATCTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTGTCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCAGATCTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCGACGCTCTATTATCAGAACAATGTCTTCATGTCTACTTCTAAGTGTTGGGTAGAACCAGACCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTATTACCTCCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTCGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGATGCATACCCGCTCACAAAACACCCTAAGCCTGCTTATCAGAAAGTGTTTTACACTCTGCTAGATTGGGTTAAACATCTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCGTTTTCAGTGACAATGCTAGAAGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTATGCTAGTCTCTACGAAAAATCCACTGTTTTGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTCACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCTATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCTTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTGGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGCGATTTCGTGAAGACTGCTCCGGGTTTTGGTTGCGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTTACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACAATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAGGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACATTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAGTATTTTGAATGTTATGACGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGACAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATATCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCTACTGTGGTCATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGATGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTACCGCCTCTCCAATGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGGGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAACGTAAAATTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCGGATTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAACGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGGCCTGATGGAGACTACTATCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGACGCATACCCGCTCACAAAACACCCTAAGCCTGCTTATCAAAAAGTGTTTTACACTCTACTAGATTGGGTTAAACATCTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCGTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAGTCCACTGTCTTGCAAGCTGCAGGCATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAATGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCAGTCGGCTCAGAGGCTGTTGAAGATTTCAACAAACTTGCAGTTTCTGACTGGACTAATGTAGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAACAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGCACGAGTACTTACAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCATAATGTGAGTCCTCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAGGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATCCAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCTCATGCGGCTGTAGACGCTTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGATTGTTACACAGGCTTTAAGCCTAATAACACCAATGCGCAGTACTTGTTTTGTACTGTTAATGCTCTACCAGAAGCAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGTACTAATTATGATCTTAGTGTCATAAATAGCCGACTGAGTTACAAACATATTGTTTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCTGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGATAATAAATTTGTACCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAACAAGCAACTAGAGGTTGTCAAGGCCTTTTTAGCACATAATCCAAAATGGCGTAAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCTCAGGGTAGTGAGTATGATTACGTCATCTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACTATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCAAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGCTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGCTATCACACACTATTCTGCACGCGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGGTTTGACGTTGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAATGTACCATTACAGCTGGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGATGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTGCACACTTGATTCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGATACTTTGTTAAAATTGGAAGACCACAAAAATGTGAATGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCTGTTTATGCTTGCTTCAAGCATGCATTAGGATGTGATTATTTATATAACCCTTACTGCATTGACATACAGCAATGGGGTTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCTTTTATTGACAATGAAGAAAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAATCCTGCTGCAATTCACGATGTGGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAACAATGTTAGATGTCTGGATTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGATACTCGCACTCGCTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTTTACTATGATGATAGTAATTGTGAACTTGTTGATGGGCAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAAACTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAATGTCGTTAAGAAAGGTGCCTTCACCGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAAATGTATTTTTACAAATAAGACTAGTTTACCTACAAATGTAGCTTTTGAGTTATATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAATTTAGGTGTTGTCGCAACATATAAGTTTGTGTTGTGGGATTATGAAGCTGAACGTCCTTTCTCAAATTTCACTAAGCAAGTGTGTTCCTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAATTACAATATGGCCTTTTGAATGATCTACCTGTAAGTACTGTTGGAAATAAACCTGTCACATGGTATATCTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTACTATACACAGGGACGTACTTTTGAAACCTTCAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTCTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGAATCCCGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATATGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAACACACCA >TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTCAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACACGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTTGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCCATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTTGTGACATTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAGGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATTCGATAGTTGAAAAAGGCTATATAGGTGTTATAACACTTGACAATCAAGACCTTAATGGCAATTTCTACGATTTCGGAGATTTCGTGAAGACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTCACTGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATCATTCATTGTGCCAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACCGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACGATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAGCACTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGATGGTGGGTGCATTAGTGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATATGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCACCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAACGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGATAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTCTGATGGGATGGGACTATCCAAAGTGTGACCGTGCTCTACCTAACATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTATCGCCTCTCCAATGAGTTAGCGCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTCCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTAGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAGCGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGACGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTCGTGTGCTACAACAAAGATTATGCTGACTTAGGTTATGTGGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAATGTCTTCATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCAGATGGAGACTACTACCTTCCCTATCCAGATCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAGCGTTACGTGTCATTGGCTATTGATGCATACCCACTTACAAAACATCCTAAGCCTGCTTATCAAAAAGTTTTTTATACTCTATTAGATTGGGTTAAACATTTACAGAAAAACTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCTACTGTCTTGCAAGCTGCAGGTATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAGTGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATTACGCCATATGTGTGTAGTTTTAGTGGTTGTAACGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTAGGTTCAGAGGCTGTTGAAGATTTTAACAAACTTGCAGTCTCTGACTGGACCAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTGTCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGATTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGTACGAGTACTTATAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCACAACGTGAGTCCCCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATACAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCCCATGCTGCTGTAGACGCCTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGACTGTTATACTGGCTTTAAGCCGAATAACACTAATGCGCAGTACTTGTTTTGTACTGTCAATGCTTTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGCACTAATTATGATCTTAGTGTCATAAATAGCCGGCTGAGTTACAAACACATTGTCTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCCGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAGTTTGTACCTGTCAACCCAGAATCAAAGCAATGCTTTAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAATAAGCAACTAGAGGTTGTCAAGGCCTTTTTAACACATAATCCAAAATGGCGCAAAGCTGTTTTCATCTCACCATATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATTTACACACAGACCTCTGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACCATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCTAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGTTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGTTATCATACACTATTCTGCACACGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGCTTTGATGTTGAAGGCGCACATGTCTGTGGTGATAATGTTGGAACTAACGTACCATTACAACTTGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGGTGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAATCACGGGCACCACCGGGTGAGCAATTTGCACACTTGATCCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGATCTGTGACTATTTTGATGGCTTATCAGACATTCTAATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTATTTTGTTAAAATTGGAAGACCACAAAAATGTGAGTGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCCGTCTATGCTTGCTTTAAGCATGCACTAGGATGTGATTATTTATACAACCCTTATTGCATTGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCCTTTATTGACAATGAAGACAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAACCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAATAATGTTAGATGCCTGGACTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGACACTCGCACTCGTTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCACGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTCTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGTAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAACTTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAGAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAACGTCGTTAAGAAAGGTGCCTTCACTGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACTAATGTAGCTTTTGAGTTGTATGCAAAACGTAAACTTGGACTCACACCTCCATTAACAATACTTAGGAACTTAGGTGTTGTCGCAACATATAAGTTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCTTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCATTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAGTTACAATATGGCTTTTTGAATGATCTACCTGTAAGTACTGTTGGGAATAAACCTGTCACATGGTATATATATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACTTTTGAAACCTTTAAGCCTCGTAGTACAATGGAGGAAGATTTTCTTAGTATGGATACTACACTCTTCATTCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCGAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTAAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACATTCTATCCACAACTCCAATCTTCTGAATGGAATCCAGGTTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGCGAAATTACCTGATGGCATTACCATTAATGTCGTTAAGTATACTCAGTTGTGTCAATATCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCTGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATACGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACTGAGTTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGATACTCCTAAATTTAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAATACACCA >DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAATAAAGATGTTGCATGTATTGGTAAATTCCTTAAGACCAATTGTTCCCGTTTTAGGAATTTAGACAAACATGATGCCTACTACGTAGTCAAGCGTTGTACTAAGAGCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCAGGTGTAGTTGCTGAACATGACTTCTTTTTGTATAAGGAAGGTCGATGTGAATTCGGTAATGTTGCACGTAAGGATCTTACAAAGTACACAATGATGGATCTGTGTTATGCTATTAGGAACTTTGATGAAAAGAACTGTGAAGTTCTTAAAGAAATACTTGTGACATTAGGTGCCTGCAATGAATCTTTCTTTGAAAATAAGGATTGGTTTGACCCAGTAGAAAATGAAGCTATACATGAAGTATACGCAAGACTTGGACCTATAGTAGCCAACGCTATGCTTAAATGTGTAGCGTTTTGTGATGCTATTGTGGAAAAAGGTTACATAGGTATTATAACTCTTGATAACCAAGATCTTAATGGCAATTTTTACGATTTCGGTGATTTTGTAAAAACAACGCCAGGTTTTGGATGTGCTTGCGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAATTTTGTGAAAAGTGATATCTATGGTGCTGATTATAAGCAGTACGATTTACTAGCTTATGATTTCACGGACCACAAGGAAAAACTTTTCCAAAAATATTTTAAGCACTGGGATCGAACATACCACCCTAATTGCTCTGATTGTACAAGTGATGAGTGCATTATTCATTGTGCTAATTTTAACACGTTATTTTCAATGACCATACCTAGTACCGCTTTCGGACCACTTGTCCGTAAAGTTCACATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACAATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCTCTGCACTTTTAGATCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACATTTCTTCTTTGCACAGGGCGGTGAGGCTGCTATGACAGACTTCAATTATTACCGCTACAACAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTACGACGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGACAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTCTACCCACAATGACTCAAATGAATTTGAAATATGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTATTTCTACCATGACTACGAGACAATACCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCCACTGTTGTCATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAACATGCTTAAAAATTTGATGCGTGATGTTGATAACGGTTGTTTGATGGGGTGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTGGGTTCTAAGCATGTTGGTTGTTGTACACATAGTGATAGATTCTACCGCCTCTCCAACGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACAGGCGGTTTTTACTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCTTACGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGCGTTGATTCAAACGCTTGTAACAATGTTACAGTAAAGTCCATACAACGTAAAATCTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCAGATCTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACGCTCTATTATCAGAATAATGTCTTCATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGCGTTGGACCACATGAATTTTGTTCACAACACACATTGCAGATTGTAGGACCTGATGGAGACTACTATCTTCCCTATCCAGACCCGTCTAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTATCATTGGCTATTGATGCATATCCGCTCACAAAACACCCTAAGCCTGCTTATCAAAAAGTATTTTACACTCTGCTAGATTGGGTTAAACATCTACAGAAAAATTTGAATGCAGGCGTTCTTGATTCGTTTTCAGTGACAATGCTAGAAGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTATGCTAGCCTCTATGAAAAATCCACTGTTTTGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTTATTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTATGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCCATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTTGTGACAGTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAGGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTTGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGAGATTTCGTGAAGACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTCACCGAACATAAGGATTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATCATTCATTGTGCCAATTTTAACACATTGTTTTCTATGACAGTACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACGATGAAGTTGAGTATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACACTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGACGGTGGGTGTATTAGTGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCATCAGAAGCATTTGAAATCAATTGCTGCAACACGCAACGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTCTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTATCGCCTCTCCAATGAGTTAGCGCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAACGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCTGATTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAATGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTACTACCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGATGCATACCCACTTACAAAACACCCTAAGCCTGCTTATCAAAAAGTGTTTTATACTCTACTAGATTGGGTTAAACATTTACAGAAAAACTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCTACTGTCTTGCAAGCTGCAGGTATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAGTGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTAGGTTCAGAGGCTGTTGAAGATTTTAACAAACTTGCAGTCTCTGACTGGACTAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGTACGAGTACTTATAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCACAACGTGAGTCCCCTTAAAGCCCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAACACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATACCAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCGTGTTCTCATGCTGCTGTAGACGCCTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGACTGTTATACTGGCTTTAAGCCTAATAACACCAATGCGCAGTACTTGTTTTGTACTGTCAATGCTCTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGTACTAATTATGATCTTAGTGTCATAAATAGCCGACTGAGTTACAAACACATTGTTTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTATAGGTGCCCAGCCGAGATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAGTTTGTACCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAATAAGCAACTAGAGGTTGTCAAGGCCTTTTTAACACATAATCCAAAATGGCGTAAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGTCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATTTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACCATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCTAAACCTGAAACTTGTGGTTTGTTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGTTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGTTATCACACACTATTCTGCACGCGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGGTTTGACGTTGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAACGTACCATTACAGCTTGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGGTGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTTCACACTTGATCCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTACTTTGTTAAAATTGGAAGACCACAAAAATGTGAATGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCTGTTTATGCTTGCTTTAAGCATGCATTAGGATGTGATTATTTATATAACCCTTATTGCATTGATATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCCATACATGACTGTTTTGTCAAACGTATTGATTGGTCAATTGTGTACCCCTTTATTGACAATGAAGACAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAATCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAATAATGTTAGATGTCTGGATTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGATACTCGCACTCGTTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTTTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAAACTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAACGTCGTTAAGAAAGGTGCCTTCACTGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACCAATGTAGCTTTTGAGTTGTATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAACTTAGGTGTTGTCGCAACATATAATTTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCTTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAGTTACAATACGGCCTTTTGAATGATCTACCTGTAAGTACTGTTGGAAATAAACCTGTCACATGGTATATATATGTGCGCAAGAATGGTGAGTACGTCGAACAAATTGATAGTTATTATACACAGGGACGTACTTTTGAAACCTTCAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTATGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGTATCCAGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAGTTTGATTTGCTTGTCTCTGATTTATATGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGATACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAACTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAATACACCA >80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ATGAGTTCCAAACAATTTAAGATCCTCGTTAATGAGGACTACCAAGTCAACGTGCCTAGTCTTCCTTTCCGTAACGCTTTGCAGGAAATTAAGTACTGCTACCGTAACGGTTTTGAGGGCTATGTTTTCGTACCTGAATACCGTCGTGACCTAGTTGATTGCGATCGTAAGGATCACTACGTCATTGGTGTTCTGGGTAACGGAATAAGTGATCTTAAACCTGTTCTCCTTACCGAACCTTCCGTCATGTTGCAAGGCTTTATTGTTAGAGCTGGCTGCAATGGCGTTCTTGAGGACTTTGACCTTAAAATCGCCCGTACTGGAAATGGCGCCATATATGTAGATCAATACATGTGTGGTGCGGATGGAAAACCAGTTATTGAAGGTGAGTTTAAGGATTATTTCGGTGATGAGGACGTTATCATCTATGAAGGAGAGGAGTACCATTGTGCCTGGCTAACAGTGCGCGATGAAAAACCTTTATGTCAACAAAATCTCCTCACAATTAGGGAAATCCAATACAATCTGGACATCCCACATAAGTTGCCTAATTGTGCTATCAGAGAGGTAGCACCACCAGTCAAGAAGAATTCCAAGGTTGTTCTTTCTGAAGAGTATAAAAAGCTCTATGACATCTTTGGTTCACCATTTATGGGCAATGGGGACAGTCTTAACAAGTGTTTTGACAGCCTCCACTTCATTGCTGCCACTCTTAAGTGTCCTTGTGGCGCCGAGAGTAGTGGTGTTGGTGATTGGACTGGTTTTAAGACTGCTTGTTGTGGTCTTCAAGGCAAAGTTAAAGGCGTCACATTAGGTGCTGTTAAACCAGGTGATGCCGTTGTCACTAGCATGAGTGCAGGTAAGGGTGTAAAATTCTTTGCTAATAGTGTACTCCAATATGCTGGTGATGTGGAAAATGTCTCTGTTTGGAAAGTGATTAAAACTTTCACTGTTAATGAGACTGTCTGCACCGCTGATTTTGAAGGCGAATTGAACGACTTCATTAAACCAGAGAGTACTTCACCTGTTTCATGTTCTATTAAGAGAGCGTTCATCACTGGTGAGGTTGATGATGCAGTCCATGACTGTATTATCTCAGGAAAGTTGGACCTTAGTACTAACCTTTTTGGTGGTGCTAACCTGCTTTTCAAGAAAACGCCCTGGTTTGTGTTAAAGTGTGGTGCTATTTTTGCTGATGCTTGGAAAGTTGTTGAAGAACTGCTTTGTTCTCTCAAACTTACATACAAGCAAATCTATGATGTAGTAGCATCACTTTGCACTTCTGCCTTTACTATTATGGATTACAAACCTGTATTTGTAGTTGCATCTAATAGTGTTAAGGATCTCGTTGACAAGTGTGTCAAAATTCTTGTGAAAGCCTTTGATGTTTTCACACAGACAATTACCATTGCGGGTGTGGAGGCTAAGTGCTTTGTGCTTGGCTCTAAATACTTGCTTTTTAATAATGCACTTGTTAAGCTTGTCAGCGTTAAAATACTTGGCAAGAGGCAGAAAGGTCTTGATAGTGCATTCTTTGCCACTAATTTGATTGGTGCTACTGTTAAGGTGACACCACAAAGAACTGAGGCAGCCAATATTAGTTTGAATAAAGTAGATGATGTTGTCACACCTGGTGAAGGTCATATTGTCATTGTAGGCGACATGGCTTTTTACAAGAGTGGAGAGTACTACTTTATGATGGCAAGTCCTGATTCAGTTCTCATTAATAACGTTTTTAAAGCAGCTCGAGTGCCATCTTATAACATTGTTTACAATGTGGATGATGATACCAAGAGTAAGATGTCATCTAAAATTGGAACGCCATTTGAATTTGATGGTGATGTGGATGCTGCTATTGTTAAGATTAACGACTTACTTGTTGAGTTTAGACAAGAAAAGTTTTGTTTCAGAGCACTTAAGGATGGTGAAAGTATCTTGGTTGAGGCATACCTTAAGAAATATAAAATGCCAATTTGTCTCAAAAATCATGTTGGTTTATGGGACATCATAAGACGCGATTCTGATAAGAAGGGTTTTCTTGACACTTTCAGTCATCTTAATGAATTGGAGGATGTCAAGGATGTAAAAATTCAGTCTATTAAAAATATCCTTTGCCCTGACCTTCTGTTAGAATTAGATTTTGGTGCAATTTGGTATAGATGTATGCCAGCCTGCTCTGATGTGTCTATTTTGGGTAATGTTAAAATCATGCTAGGTAATGGTGTTAAAGTGATTTGTGATGGCTGCCATGGTTTTGCTAACCGTTTAACGGTTAATTACAGCAAACTGTGTGACACAGCTCGTAAAGACATTGAAATTGGTGGTATACCATTTTCCACCTTTAAAACACCATCTAGCAGCTTCATTGACATGAAAGATGCCATCTATTCTGTGGTTGAATACGGTGAAGCATTTTCCTTTAAGACTGCAAGTGTACCTGTAACTAATAGTGGTACTGTCAAAAATGACGACTGGTCAGACCCCATTTTGTTAGAACCTGCAGATTATGTCGAACCTAAAGATAACGGTGATGTAATTGTCATTGCTGGATACACCTTTTACAGGGATGAGAACGATCACTTTTATCCATATGGTTCCGGCATGGTTGTGCAGAAGATGTACAACAAGATGGGTGGTGGTGACAAGTCAGTTTCATTTTCAGACAACGTTAATGTTAAAGAGATAGAACCTATTACACGTGTCATGCTAGAATTTGAATTTGACAATGAGGTGGTAACACAGGTTCTTGAAAAAGTCATTGGTGCCAAATATAAGTTTACAGGTACCACTTGGGAAGAATTTGAAGATTCTATTTCTGAGAAACTTGACAAGGTTTTCGACACGCTTGCTGAACAGGGTGTAGAACTTGAAGGTTACTTCATTTATGACACTTGTGGCGGATTTGACATTAATAATCCAGATGGTGTTATGATTTCACAGTATGATCTTAACTCAGCTGTTGATGTCAAAAGTGATTCTGATGCAAGCGTGGAAGACACATCTTCGATTTCTGATAACGAAGATGTTGAACAAATAGAAAAAGAGAACGTCTCAGCTGCTGATGTTACAGTTGTAGATGTTGAAGAATTTGTTGAGCAAGTTTCTCTTGTTGACACCGAAGAACAACTCCCCTCAGTAGAGGAAAAAGTTGAAGGCTCTGCTAAAGATGACCCGTGGGCTGCTGCTGTTGATGAACAGGAAGCTGAACAACCTAAACCTTCCTTAACTCCATTTAAGACAACAAATCTTAATGGTAGAATTATTCTTAAACAACAAGATAACAATTGTTGGATAAACGCTTGCTGTTACCAGTTGCAAGCTTTTGACTTTTTCAACCATGAATTATGGGATGGTTTTAAGAAAGATGACGTTATGCCTTTCGTAAACTTCTGTTATGCAGCTCTAACTTTGAAGCAGGGTGATTCAGGAGACTCAGAATACCTTTTGGAGACGATGCTCAATGATTATAGTACAGCTAAAGTTGTTCTTAGTGCTAAGTGTGGCTGTGGTGTTAAAGAAATAGTTTTAGAGCGAACTGTGTTTAAGCTCACACCTCTTAAGAATGAGTTTAAATATGGTGTCTGTGGTGACTGTAAACAAATTAACATGTGTAAGTTTGCAAGCGTGGAAGGTTCAGGTGTTTTTGTTCATGATAGA---ATTGAAAAACGAACACCTGTGTCACACTTCATTGTGACACCTATTATGCACGCAGTTTACACAGGTACAACACAGAGTGGTCATTACATGATTGAGGATTGCACTCATGATTATTGTGTGGATGGTATGGGAGTTAAACCCCGTAAACAAAAGTTTTACACATCCACCTTGTTTCTTAATGCAAATGTAATGACA---------------------------------------GCTGACTCTAAAACTACAATCGAACCAACTGCACCTGTTAAGGATAAGCTTGTAGAAGAATGTCAAAGTCCTAAAGACTTTATATTACCCTTTTACACAGCGGGGAAAGTGTCATTTTACCAAGGAGATTTGGATGTTTTGATTAACCTTCTTGAACCTGACGTTGTTGTTAACGCTGCTAATGGTGATCTTAGGCACATGGGTGGTGTTGCTAAAGCCATTGATGTGTTCACAGGTGGTAAGTTGACGAAACGTTCTAAAGAATATCTTAGGACTAATAAAACAATAGCTCCTGGTAATGCTGTGCTTTTTGAAAACGTACTTGAGCATCTTAGTGTATTGAATGCTGTCGGACCACGTAATGGTGACAGTAGAGTTGAAGGTAAACTCTGTAACGTTTACAAAGCAATTGCCAAGTGTGACGGTAAGATATTAACACCACTTATTAGTGTTGGTATCTTCAAAGTCAAACTGGAAGTTTCATTGCAGTGTCTACTTAAAACTGTCACAGATAGGGAATTAAATGTCTTTGTTTACACTGACCAAGAGAGAATTACCATAGAAAATTTCTTCAATGGTACTATTCCTGTCAAGGTAACGGAAGACACTGTGAATCAAAAGCGTGTGTCTGTGGCACTTGATAAAACTTATGGTGAGCAACTCAAAGGCACTGTTGTTATTAAAGACAAAGATGTTACTAACCAGTTGCCAAGTGTGTCAGATGTTGGTGAAAAAGTCGTTAAGGCATTGGATGTTGATTGGAATGCTTACTATGGCTTTTCAAATGCAGCGGCTTTTAGTGCCAGTTCCCATGATGCTTATATATTTGAAGTTGTAACACACAACAACTTCATTGTTCATAAGCAGACTGATAATAATTGTTGGGTTAATGCAATTTGTTTAGCATTACAAAGGCTTAAACCAACATGGAAGTTTCCTGGTGTTAAAAGTTTGTGGGATGATTTTCTTGTTCGTAAAACTGCTGGATTTGTCCACATGCTATACCACATTTCAGGCTTAAAGAAAGGACAACCTGGTGATGCTGAGTTGACTTTACATAAGCTTGGTGAGTTGATGTTGAGTGATAGTGCTGTCACCATCACACATACAACTGCATGTGACAAGTGTGCAAAAACTGAAACTTTTACAGGCCCTGTGATAGCAGCACCTCTTCTGATCCATGGCACTGATGAAACCTGTGTTCATGGTGTAAGTGTTAATGTTAAAGTGACAAGTGTTAGAGGCACTGTGGCTATCACTTCCTTAATCGGTCCTGTTGTAGGAGATGTTATTGATGCAACTGGTTATATTTGTTATACTGGATTGAACTCACGTGGTCATTATACCTATTATGATAATCTTAATAGTTTAATGGTTGATGCTGAAAAGGCCTATCATTTTGAGAAAAACCTCTTACAGGTTACAACAGCCATTGCTAGTAATTTTATTGCCTACACACCTAAGAGTGAGATCTATCCTAAGGTTCAACCAGTTAAAGAATCACATACAGCTCGTGTTTTTAGTGAGGTTGAAGAAATTCCTAAAAATGTAGTTCGTGAAACAAAATTGCTAGCTATTGAGAGTGGTGCAGATTACACACTCTCAACACTTGGTAAATATGCTGATGTTTTCTTTATGACCGGTGATAAAATTCTTAGGTTTCTCCTTGAAGTCTTTAAATATTTATTGGTTGTTTTTATGTGTCTTAGAAAATCTAAGATGCCTAAAGTTAAGGTAAAACCACCGCATGTATTCAAAAACTTAGGTGCTAAAGTTAGGACATTGAATTACGTAAGACAATTGAACAAACCAGCGTTATGGCGTTACGTAAAACTAGTGTTACTTTTAATAGCATTGTACCACTTTTTCTACTTGTTTGTTAGTATACCAGTAATGCACAAATTAGTGTGTAGTAGTAGTGTACAAGCGTATAGTAATTCTAGTTTTGTGAAATCAGAAGTTTGTGGTAATTCTATTCTATGCAAGGCGTGTCTGGCATCTTATGATGAATTGGCTGATTTTGATCATCTTCAGGTGTCATGGGATTATAAGTCGGATCCGCTATGGAATAGAGTTATACAATTGTCTTACTTCACATTCTTGGTTGTTTTTGGCAATAATTATGTTAGATGTCTTCTTATGTATTTTATCTCTCAGTACCTTAACTTGTGGTTGTCTTATTTTGGTTATGTTAAGTATAGTTGGTTTTTGCATGTCATCAACTTTGAATCAATTTCTGTTGAATTTGTGATCATAGTTGTAGTTTTTAAGGCAGTTCTCGCACTTAAACACATCTTCTTTTCATGCAATAACCCATCATGTAAGACTTGTTCTAAGATTGCTAGGCAGACACGTATTCCTATACAAGTTGTGGTTAATGGTTCAATGAAGACTGTGTATGTCCACGCTAATGGTACTGGTAAACTCTGCAAAAAGCATAATTTCTACTGTAAAAATTGTGACTCTTACGGTTTTGACCACACATTCATCTGTGACGAGATTGTGCGTGACCTGGGTAACAGTATCAAGCAAACTGTTTATGCCACTGATAGATCATACCAGGAAGTCACAAAGGTTGAATGCTCTGATGGCTTTTACAGGTTTTATGTTGGTGATGAATTCACGGCATACGACTATGATGTAAAAAACAAGAAGTATAGTAGCCAGGAAGTGCTTAAAACTATGTTCCTGCTTGATGACTTCATCGTCTATAGTCCATCAGGGTCTTCCCTCGCTAGTGTTAGAAATGTCTGTGTTTATTTTTCACAACTGATTGGTAGGCCTATTAAAATTGTTAATAGTGAACTTCTTGAGGATTTATCTGTAGACTTTAAGGGAGCACTTTTTAATGCTAAGAAAAATGTTATTAAAAACTCTTTTAATGTTGATGTGTCAGAATGTAAAAACCTTGAAGAGTGTTATAAAGCATGCAACCTTGATGTGACATTTTCTACTTTTGAAATGGCTGTTAATAACGCTCATAGATTTGGTATATTGATTACAGACCGCTCCTTTAACAATTTTTGGCCATCAAAAATTAAGCCAGGTTCTTCTGGTGTCTCTGCTATGGACATTGGTAAGTGCATGACTTTTGATGCAAAGATTGTTAATGCAAAGGTTTTAACGCAACGAGGTAAAAGTGTTGTATGGCTTAGTCAGGACTTTTCTACTCTTAGTTCTACAGCACAGAAAGTTTTAGTTAAAACTTTTGTAGAAGAAGGTGTGAACTTTTCACTAACGTTTAATGCTGTGGGTTCAGATGAAGACCTCCCCTATGAGAGATTCACTGAATCAGTTTCACCAAAGAAAGGTTCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAGATCTTCTGGTGTTTGGTTTTGTTTATTACCTTGTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGATGGTTATGAATACATGGTTATTAAGAATGGCATTGTTCAACCATTTGATGATTCTATTAACTGTGTACATAACACATACAAAGGCTTTGTTATGTGGTTTAAAGCTAAATATGGTTTTGTACCTACATTCGACAAGTCTTGTCCTATTGTTTTAGGAACTGTTTTTGACTTAGGCAATATGAGACCAATCCCTGATGTGCCAGCTTATGTAGCACTTGTTGGTAGATCCCTAGTGTTTGCGATTAATGCAGCATTTGGTGTTACTAATGTTTGTTATGATCATACAGGTTCTGCTGTGAGTAAAAACTCTTATTTTGATACCTGTGTATTTAATGCTGCTTGCACCACTCTATCAGGCCTTGGAGGTACAATTGTTTATTGTGCCAAACAAGGACTTGTGGATGGTGCTAAACTTTATAGCGAATTGATGCCTGACTATTTTTATGAGCACGCTAGTGGTAACATGGTTAAAATACCAGCCATTATTAGGGGTTTTGGTCTGAGATTCGTAAAAACACAGGCTACAACTTATTGCAGAGTAGGGGAGTGTGTTGAAAGTCAGGCCGGTTTTTGCTTTGGTGGTGACAACTGGTTTGTTTATGATAAAGAGTTTGGTGATGGTTATATTTGTGGAAGCTCTACATTGGGTTTTCTCAAAAATGTCTTTGCTCTCTTTAACTCTAACATGTCTGTAGTAGCCACATCCGGTGCTATGTTGGTTAACATTATCATCGCATGTTTGGCTATAGCGGTCTGTTATGGTGTTCTTAAATTTAAGAAAATCTTTGGTGATTGTACTCTCCTAGTTGTTATGATTATTGTTACATTGGTTGTTAACAATGTTTCTTATTTTGTGACCCAAAACACATTCTTTATGATTGTTTATGCCATTATTTATTACTTTACAACAAGGAAATTATCATACCCTGGTATCTTGGATGCAGGATTCATTATTGCCTATGTGAACATGGCCCCATGGTATGTGCTTGTGCTGTACATAGTGGTCTTCTTATATGATTCTCTACCCTCACTATTCAAACTTAAGGTTACAACAAACCTTTTTGAAGGGGATAAATTTGTTGGTAGTTTTGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAGACACTTGTTAATTCTACATCCTTGGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTACAAGTACTATACTGGTTCAATGGGAGAGGCCGATTACCGCATGGCTTGTTATGCTCATTTAGGTAAGGCATTAATGGATTATTCAGTCTCAAGAAATGATGTTCTTTACACACCACCAACGGTCAGTGTTAATTCAACATTACAGTCAGGACTGAGAAAAATGGCACAGCCTAGTGGTATTGTGGAACCCTGCATTGTGAGGGTAGCCTATGGCAATAATGTGCTTAATGGTTTGTGGCTTGGAGATGAAGTTATCTGCCCTAGACACGTCATTGCAAGTGACACATCACGTGTGATCAATTATGACAATGAGTTGTCCGGTGTGCGGTTACATAACTTCTCTATAGCCAAAAATAATGTGTTTTTGGGCGTTGTGTCTGCCAAGTATAAGGGTGTGAACCTTGTGCTTAAGGTTAATCAGGTAAACCCCAACACACCAGAACACAAATTCAAATCCGTGAAGTCTGGTGAGAGTTTTAACATTCTCGCTTGTTATGAAGGCTGTCCCGGTAGTGTCTACGGTGTGAACATGAGAAGTCAGGGTACCATCAAAGGTTCATTTATTGCTGGTACCTGTGGGTCAGTAGGTTATGTATTAGAAAATGGAATACTCTATTTTGTGTACATGCACCACTTAGAATTAGGTAATGGCTCTCATGTTGGTTCAAACCTTGAGGGGGTAATGTATGGCGGTTATGAAGATCAACCTAGCATGCAATTGGAGGGTACTAACGTCATGTCATCAGATAATGTAGTTGCATTTTTGTATGCTGCTCTTATTAATGGTGAAAGATGGTTTGTTACAAATGCATCAATGACGTTAGAATCTTACAATGTATGGGCCAAAACTAACAGTTTTACGGAACTTGTTTCAACTGATGCTTTTAATATGTTGGCTGCAAAAACTGGTTATAGTGTTGAGAAGTTGCTTGAATGTATTGTTAGACTCAACAAAGGTTTTGGAGGACGCACTATACTCTCTTATGGTTCATTGTGTGATGAATTCACACCTACGGAAGTTATAAGGCAAATGTATGGTGTTAATCTTCAGAGTGGTAAAGTGAAATCTCTCTTTTACCCTGTGTTGACAGCCATGGCTATTCTATTTGCTTTTTGGTTAGAGTTCTTTATGTACACACCCTTTACATGGATTAATCCATCGTTTATCAGTGTTATTCTAGCTATTACAACTTTTTTCTCTGTGTTATTAGTTGTTGGGATTAAACACAAAATGTTATTCTTTATGTCTTTTGTAATGCCTAGTGTTGTGTTGGCCACCGTTCATAATGTTGTATGGGATATGACTTATTATGAAAGCTTACAAGCTCTTGTGGCGAACACTAACACAACATTTTTACCAGTAGATATGCAAGGCGTTATGCTTGCTTTGTTCTGTGTTGTTGTGTTTGTTACATACACTATAAGATTCTTTACATGCAAGCAATCCTGGTTTTCTTTATTTGTAACAACTGTCTTTGTGGTGTTCAACATTGTTAAGTTGCTAGGCATGGTAGGTGAACCATGGACTGAAGATCACATCTTGTTATGTCTTGTAAACATGCTTACCATGTTGATAAGTCTTACTACAAAGGACTGGTTTGTTGTTTTTGTATCATACAAATTTGCTTATTATGTCGTTGTTTATGTAATGCAACCATCCTTTGTTCAAGACTTTGGGTTTATTAAGTGTGTAAGCGTGATTTACATGGCATGTGGTTATTTGTTTTGCTGTTATTATGGTATTCTTTACTGGGTTAACAGATTTACATGCATGACGTGTGGTGTTTACCAATTCACTGTCTCACCGGCAGAGCTCAAGTATATGACTGCTAACAATTTGTCAGCACCTAAGACCGCATATGATGCCATGATTCTTAGTGTTAAATTGATGGGTATAGGTGGAGAGAGAAATATAAAAATCTCCACTGTACAGTCTAAACTCACAGAGATGAAATGCACAAACGTTGTGCTGCTTGGGCTTTTGTCTAAAATGCATGTTGAATCTAACTCAAAGGAGTGGAATTATTGTGTTGGGCTGCATAATGAGATTAATTTGTGTGATGACCCCGAAGTGGTTCTTGAAAAACTACTTGCACTCATCGCATTCTTTTTATCCAAACACAATACATGTGATCTTAGTGACCTTATCGACTCCTATTTTGATAACACCACTATTTTACAGAGTGTGGCTTCTGCTTATGCTGCTTTACCTAGCTGGATTGCATATGAAAAAGCTCGCGCGGATTTAGAAGAGGCTAAGAAAAATGATGTTAGTCCACAATTATTGAAACAGCTTACAAAAGCATGCAATATTGCTAAGAGTGAGTTTGAACGCGAGTCCTCGGTTCAAAAGAAGCTTGATAAAATGGCCGAGCAAGCTGCAGCTAGTATGTACAAAGAGGCAAGGGCTGTTGACAGAAAATCAAAAATAGTTTCTGCTATGCATAGTCTTCTTTTTGGTATGCTCAAGAAACTTGATATGTCCAGTGTTAATACTATTATTGAACAGGCCCGTAATGGTGTGTTGCCCCTGAGTATCATACCTGCTGCAGCAGCCACAAGACTTATTGTTGTAACACCTAATATTGAAGTGCTTTCCAAAATTAGGCAAGAAAACAATGTCCACTATGCAGGTGCTATCTGGTCAATTATTGAAGTCAAGGATGCTAATGGTGCTCAAGTCCATTTAAAAGAAGTCACAGCTGCCAATGAGTTGAACCTGACCTGGCCTTTGAGTATTACATGTGAGAGAACCACAAAGTTGCAAAACAATGAAATTATGCCAGGTAAACTTAAAGAGAAGGCTGTTAAAGCGTCTGCTACAATTGATGGTGATGCTTATGGTAGTGGTAAGGCCCTCATGGCTTCTGAAAGTGGTAAGAGCTTTATATATGCATTTATAGCGTCTGACAGCAACCTTAAGTATGTTAAATGGGAGAGCAATAATGATGTAATACCCATTGAACTTGAGGCCCCATTGCGCTTTTATGTAGATGGTGCTAATGGCCCTGAAGTTAAGTATCTTTACTTTGTGAAGAACTTGAACACTCTTAGACGTGGTGCTGTTCTGGGTTATATTGGCGCTACTGTTCGTTTGCAGGCTGGTAAACCTACTGAACACCCATCTAACAGTGGTTTATTAACCTTGTGTGCTTTCGCTCCTGACCCTGCTAAGGCATACGTTGATGCTGTTAAGAGAGGTATGCAGCCAGTTACTAATTGTGTGAAAATGCTCTCAAATGGTGCTGGTAATGGTATGGCTATTACAAATGGTGTAGAGTCTAATACGCACCAAGACTCTTATGGTGGTGCATCTGTGTGCATCTATTGTAGGTGTCATGTAGAACATCCTGCAATTGATGGATTGTGTCGTTATAAGGGTAAATTTGTTCAAGTACCAACCGGCACTCAAGATCCTATTAGATTTTGTATTGAAAATGAAGTCTGTGTTGTTTGTGGTTGCTGGCTTAATAATGGTTGCATGTGTGATCGTACTTCTATGCAAGGCACAACTGTTGACCAGAGTTATTTAAACCGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCACGTTAGTAGAGCTTTTGACATCTATAATAAAGATGTTGCATGTATTGGTAAATTCCTTAAGACTAATTGTTCCCGTTTTAGGAATTTGGACAAACGTGATGCCTACTATGTTGTCAAGCGTTGTACTAAGAGCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCAGTTGCTGAACATGACTTCTTTTTGTATAAGGAAGGTCGATGTGAATTCGGCAACGTCGCACGTAAGGATCTTACAAAGTACACTATGATGGATCTATGTTATGCCATTAGGAATTTTGATGAAAAGAATTGCGAAGTTCTTAAAGAAATACTCGTGACATTAGGTGCCTGCAATGAATCCTTCTTTGAAAATAAAGATTGGTTTGACCCAGTGGAAAATGAAGCTATACATGAGGTGTACGCAAGACTTGGACCTATAGTAGCCAACGCTATGCTTAAATGTGTAGCGTTTTGTGATGCTATCGTGGAGAAAGGTTACATAGGTATTATTACACTTGATAACCAAGACCTTAATGGTAATTTTTACGACTTCGGTGATTTCGTAAAGACAGCGCCTGGTTTTGGATGTGCTTGCGTGACGTCATATTATTCTTATATGATGCCCTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAATTTTGTGAAAAGTGACATTTATGGTTCTGATTATAAGCAGTATGATTTGCTAGCTTATGATTTTACAGACCATAAAGAAAAGCTGTTCGAAAAATATTTCAAACACTGGGACCGCACATACCATCCTAACTGCTCTGATTGTACAAGTGATGATTGTATCATTCATTGTGCTAATTTTAACACATTGTTTTCAATGACCATACCCAACACTGCTTTTGGACCTCTTGTACGTAAAGTCCACATAGATGGTGTGCCAGTTGTTGTTACTGCTGGTTACCATTTTAAACAGTTGGGTATTGTGTGGAATCTTGATGTTAAATTAGACACTATGAAGTTGACTATGACAGATCTTCTTAGGTTCGTCACTGACCCTACATTACTTGTAGCATCAAGCCCTGCATTGTTAGATCAGCGCACTGTCTGTTTTTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTGAAACCAGGTCACTTTAACAAGGATTTCTACGATTTTATAACAGAGCGTGGATTCTTTGAGGAGGGATCTGAGTTGACGTTGAAACATTTCTTCTTTGCACAGGGTGGTGAAGCCGCTATGACAGATTTTAACTACTACCGTTATAACAGAGTTACTGTTTTAGACATCTGTCAGGCGCAATTTGTTTATAAAATTGTGTGTAAGTACTTTGATTGTTACGATGGTGGCTGCATCAATGCTCGAGAGGTTGTTGTTACCAACTACGACAAGAGTGCTGGTTATCCACTTAATAAATTTGGTAAGGCAAGACTTTACTATGAGACTCTGTCATATGAGGAGCAGGATGCGATTTTTGCATTAACAAAGAGAAATGTTCTACCCACAATGACACAAATGAATTTGAAATATGCTATATCTGGAAAGGCTAGAGCTCGCACTGTAGGAGGAGTGTCACTCCTTTCGACAATGACTACGAGACAATACCACCAGAAGCATTTAAAGTCTATTGCTGCTACACGTAATGCCACTGTTGTTATTGGAACGACTAAGTTCTACGGTGGCTGGGATAATATGTTAAAGAATTTGATGCGTGATGTAGATAACGGCTGTTTGATGGGATGGGACTATCCAAAGTGCGACCGTGCTTTGCCTAATATGATACGAATGGCTTCTGCAATGGTATTGGGTTCTAAGCACATTGGGTGTTGTACACATAGTGATAGGTTCTATCGCCTCTCTAACGAGTTAGCTCAAGTACTTACAGAGGTTGTGCATTGCACAGGTGGTTTTTATATCAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAATTCGGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGACTCAAACACCTGTAACAATGTTACAGTTAAGTCCATACAACGCAAGATATATGATAATTGTTATCGAAGTAGCAGTGTTGATGATGACTTCGTTGTTGAGTATTTTAGCTATTTAAGAAAGCACTTTTCTATGATGATTTTGTCAGATGATGGCGTGGTTTGTTACAACAAAGACTATGCTGATCTTGGTTATGTAGCAGACATTAGTGCTTTTAAAGCTACTTTGTATTACCAGAATAATGTTTTTATGTCTACAGCCAAGTGTTGGGTAGAACCAGACCTTAATGTTGGACCACACGAATTTTGTTCACAACACACACTACAAATTGTAGGACCGGATGGTGATTATTATTTACCATACCCAGACCCTTCTAGAATCTTGTCAGCAGGTGTTTTCGTTGATGACATCGTTAAAACAGATAACGTCATTATGCTTGAACGTTATGTGTCTTTAGCAATCGATGCGTATCCACTTACAAAACACCCTAAACCCGCATATCAAAAAGTGTTTTATGCATTGTTAGATTGGGTTAAACATTTACAGAAGACTCTAAATGCTGGTATACTTGATTCATTTTCTGTCACTATGTTGGAGGATGGTCAAGATAAATTCTGGAGTGAAGAGTTCTATGCCAGTCTTTACGAAAAGTCTACTGTTTTGCAAGCTGCCGGTATGTGTATTGTTTGTGGTTCACAAACTGTGTTACGTTGCGGAGACTGTTTAAGGAGACCTCTTTTATGCACTAAGTGCGCTTACGACCATGTCATGGGTACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGCTATAATGGTTGTACTGTTAATGATGTAACAAAATTGTTTTTGGGAGGTCTTAACTATTATTGTACTGAACATAAACCACAATTGTCATTCCCGCTCTGTGCTAATGGCAATGTGTTTGGTCTGTACAAGAGTAGTGCACTTGGTTCTGAGGACGTTGACGATTTCAATAAACTTGCAATCTCGGACTGGACCAATGTAGAAGATTACAAACTTGCTAATAATGTCAAAGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCAAAGGAGGAGTCTGTTAAAGCTGAATATGCTTATGCCATATTAAAGGAGGTGGTCGGCCCTAAGGAAGTTGTACTCCAATGGGAATCCTCTAAGGTTAAACCTCCACTTAACAGAAATTCTGTTTTCACATGTTTTCAGCTAAACAAGGATACTAAAATTCAGTTAGGTGAATTTGTGTTTGAGCAGTCAGAGTATGGTAGTGAATCTGTTTACTACAAGAGTACTAGCACTACTAAGCTGACACCGGGTATGATTTTTGTGTTGACATCTCATAACGTGAGTCCACTTAAAGCTAATATCTTAGTCAACCAAGAGAAGTACAATACCATATCCAAGCTCTATCCTACGTTCAACATAGCGGAAGCCTATACCACATTGGTGCCTTACTATCAAATGATTGGTAAGCAAAAGTTTACAACTATCCAAGGTCCTCCTGGTAGTGGTAAATCACATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAAGCTAGGATCGTCTACACAGCATGTTCACATGCTGCTGTGGATGCATTGTGTGAAAAGGCTTCTAAGAACTTTAATGTGGATAAGTGTTCAAGGATAATACCCCAAAGAATCAGAGTTGACTGCTATATGGGTTTTAAACCTAATAATACTAATGCACAGTACTTGTTTTGTACAGTTAATGCTTTACCTGAAGCTAATTGCGACATCGTAGTTGTGGATGAAGTCTCAATGTGTACAAATTATGATCTCAGTGTTATAAATAGTAGACTGAGTTACAAGCACATTGTTTACGTGGGAGACCCACAACAGCTTCCAGCTCCTAGAACCTTGATTAATAAGGGTACACTCCAGCCTGAAGATTACAATGTTGTAACCCAGAGAATGTGTAAACTAGGACCTGATGTATTTTTGCATAAATGCTATAGATGCCCAGCTGAAATTGTTAAGACAGTCTCCGCGCTTGTTTATGAGAATAAGTTTTTGCCTGTCAACCCAGAGTCAAAGCAGTGCTTTAAAATGTTTGTAAAAGGTCAGGTGCAGATTGAATCCAACTCTTCTATAAACAATAAGCAACTAGATGTTGTTAAGGCATTCCTAGCACATAATCCAAAATGGCGTAAAGCCGTTTTTATCTCACCCTATAACAGTCAGAACTATGTCGCAAAACGTCTACTCGGTTTGCAAACACAAACGGTAGACTCTGCTCAAGGTAGTGAGTATGATTATGTCATTTACACACAGACTTCTGATACGCAGCATGCTATTAATGTCAACAGGTTTAATGTTGCCATTACTAGAGCAAAGGTTGGTATTCTCTGTATCATGTGTGATAGAAAGATGTATGACAATCTTGATTTCTATGAACTCAAAGATTCAAAAGTTGGCTTGCAAGCAAAACCTGAAACGTGTGGTTTGTTCAAAGATTGTTCAAAGACTGATCAATACATACCACCAGCATATGCTACAACATATATGAGTCTGTCTGAAAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAGGATGTTAAATATGCTAATGTTATCTCATATATGGGATTCAGGTTTGAGGCCAATGTACCAGGCTATCACACATTGTTTTGCACACGAGACTTTGCTATGCGTAATGTGAGATCATGGTTAGGGTTTGATGTCGAAGGTGCACATGTCTGTGGTGATAACATCGGAACTAATGTACCACTACAGCTGGGTTTTTCAAATGGTGTAGATTTTGTAGTACAAACTGAGGGATGTGTTGTTACTGAGAAAGGTAATAGTATTGAGGTTGTAAAGGCAAGAGCACCACCGGGTGAGCAATTTGCACATTTGATTCCACTTATGAGAAAAGGTCAGTCTTGGCACATTGTTAGACGTCGTATAGTGCAGATGGTTTGTGACTATTTCGACGGTTTATCTGACATCCTAATTTTCGTGCTTTGGGCTGGTGGTCTTGAGCTTACAACTATGAGATACTTTGTTAAAATTGGAAAACCACAGAAATGTGATTGCGGCAAAATTGCAACGTGTTATAACAGCTCGCAGTGTGTCTATGCTTGTTTTAAACATGCATTAGGATGTGATTACTTGTACAATCCTTACTGCATTGATATTCAACAATGGGGTTATACAGGATCCTTGAGCATGAACCATCATGAAGTTTGTAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGGTGCCTTGCTATATATGATTGTTTTGTCAAGCGTGTAGATTGGTCCATTGTGTACCCATTTATTGATAATGAAGAAAAGATCAATAAAGCTGGTCGCATTGTACAATCACATGTCATGAGAACTGCTCTTAAGGTTTTCAACCCTGCTGCAATTCACGATGTTGGTAATCCTAAAGGTATTCGTTGTGCTACAACATCTATACCATGGTTCTGTTATGACCGTGATCCTATTAATAACAATGTTAGATGTCTGGAGTATGATTACATGGTACATGGACAAATGAATGGTTTAATGTTATTTTGGAATTGCAACGTAGACATGTACCCGGAGTTCTCGATTGTTTGTAGATTTGATACTCGAACTCGCTCAAAATTGTCATTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCATTTCACACACCAGCTTATGATAGAAGAGCATTTGCTAAGCTTAAACCTATGCCATTCTTTTACTACGATGAGAGTGATTGTGAGTTTATTGATGGACAACCTAATTATGTACCACTTAAAGCTAATGTCTGCATAACTAAATGCAACATAGGTGGTGCAGTCTGTAAGAAACATGCAGCACTTTACAGAGCATATGTTGAAGACTACAACACTTTCATACAAGCTGGTTTTACAATTTGGTGCCCTCAAAATTTTGATACATATATGTTGTGGCAAGGTTTTGTTAATAGCAAAGCACTCCAGAGTTTGGAAAACGTAGCCTTCAATGTCGTCAAGAAAGGTGCCTACGCTGATTTAAAAGGTGACTTACCAACAGCAGTTATAGCTGATAAGATCATGGTGAGGGATGGACCTACTGACAAGTGTATTTTCACAAATAAAACTAGTTTGCCTACGAATGTGGCTTTTGAGCTGTATGCAAAACGCAAACTTGGACTCACACCTCCGTTAACAATACTTAGAAATCTAGGTGTTGTCGCAACACATAAATTCGTGTTGTGGGATTATGAAGCCGAATGTCCTTTCTCAAACTTTACTAAGCAAGTGTGTGCGTACACTGATCTTGATGGTGAAGTTGTAACATGTTTTGATAATAGTATTAGTGGTTCTTTTGAACGCTTTACTACTACGAAAGATGCAGTGCTTATTTCTAATAACGCTGTGAGGGGACTCAGTGCCATTAAATTACAATATGGCTTTTTGAATGATTTACCTGTAAGTACTGTAGGAAACAAACCTGTCACATGGTACATCTATGTGCGCAAGAACGGTGAGTACGTCGAACAGATTGACAGTTATTACACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGACTTTTTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACATGTTGTATTCGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCACAAGTGCGCCTAGCAAAAATGGGTTTGTTTTCTGTCCAAGAATTTATGAGTAATTCTGACAGTACACTGAAAAGTTGTTGTATAACATACGCTGACGATCCGTCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTAGACGATTTTGTGACTATCGTTAAGGGCTTAGATCTTAACGTTGTGTCGAAAGTTGTGGATGTTATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAACTCACAAATTAAAACCTTCTATCCACAACTCCAGTCTGCTGAGTGGAATCCTGGCTATAGCATGCCTACACTTTACAAAATACAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAGTTACCTGACGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATATCTCAATACCACTACACTGTGTGTTCCACATAAAATGCGTGTTCTGCATTTGGGAGCAGCAGGTGCTAATGGTGTTGCCCCTGGTACCACTGTATTAAGAAGATGGTTGCCAGACGATGCCATATTGGTTGATAATGATATGAGGGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGACTGTACTAATCTTTATATAGAGGACAAATTTGATTTACTTATCTCTGATTTATATGATGGCTCAACCAAGTCTATAGACGGTGAAAACATGTCGAAAGATGGCTTCTTTACATATATTAATGGTTTTATTAATGAGAAGCTAGCGCTTGGAGGTTCTGTAGCCATCAAAATCACTGAATTTAGCTGGAATAAAAGTTTATATGAATTAATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACCTCGTCGTCAGAAGGTTTTCTGATAGGTATCAACTACTTAGGACCATACTGTGACAAGGCTATAGTGGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCCACAATTATGGCGTTGTCACACAACTCAGTCCTAGATACTCCAAAATTCAAGTGTCGTTGCAATAACGCACTTGTTGTTAATTTAAAAGAAAGAGAATTAAATGACATGGTTATTGGATTACTAAGGAAGGGTAAAATACTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAATCACTTTGTTAACACACCA >TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 ATGAGTTCCAAACAATTCAAGATCCTCGTCAACGAGGACTATCAAGTCAACGTGCCTAGTCTTCCTATTCGTGACGTGTTGCAGGAAATCAAGTACTGTTACCGTAATGGATTCGAGGGCTATGTTTTCGTGCCAGAATACTGTCGTGACCTAGTTGATTGCGATCGTAAGGATCACTACGTCATTGGTGTTCTCGGCAACGGAATAAGTGATCTTAAACCTGTTCTTCTTACCGAACCCTCCGTCATGCTGCAAGGCTTTATTGTTAGAGCTAGCTGCAATGGCGTTCTTGAGGACTTTGACCTTAAAATTGCCCGTACTGGAAGAGGTGCCATATATGTTGACCAATACATGTGTGGTGCCGATGGAAAACCAGTTATTGAAGGTGATTTTAAGGATTACTTCGGTGATGAAGACGTTATTGAATTTGAAGGAGAGGATTACCATTGCGCTTGGACTGTTGTGCGCGATGAGAAACCGCTGAATCAGCAAACTCTCTTTACCATTCAGGAAATCCAATACAATCTGGACATTCCTCATAAACTGCCAAACTGTGCTACTAGACATGTAGCACCACCAGTCAAGAAGAACTCTAAAATAGTTCTGTCTGAAGATTACAGGAAGCTCTATGATATCTTCGGATCACCCTTTATGGGAAATGGTGACTGTCTTAGCAAATGCTTTGACACTCTTCATTTTATCGCTGCTACTCTTAGATGCCCATGTGGTTCTGAAAGTAGTGGTGTTGGAGATTGGACTGGTTTTAAGACTGCTTGTTGTGGTCTTTCTGGCAAAGTTAAGGGTGTCACTTTGGGTGATGTTAAACCTGGTGATGCTGTTGTCACTAGTATGAGCGCAGGTAAGGGAGTCAAGTTCTTTGCCAATTGTGTTCTTCAACATGCTGGTGATGTTGAAAATGTCTCTATCTGGAAAGTGATTAAAACTTTCACAGTTGATGAGACTGTTTGCACCCCTGATTTTGAAGGCGAATTGAACGACTTCATCAAACCTGAGAGTAAGTCACCAACTGCATGCAGCATTAAGAGAGCATTCATTACTGGTGAAATTGATGATGCTGTGCATGATTGTATCATTACAGGCAAATTGGATCTTAGTACCAACCTTTTTGGTAATGTTGGTCTATTATTCAAGAAAACTCCATGGTTTGTACAAAAGTGTGGTGCACTTTTTGTAGATGCTTGGAAAGTAGTAGAGGAGCTTTGCAGTTCACTCAAACTCACATACAAGCAAATTTACGAAGTTGTAGCATCACTTTGCACTTCTGCTTTTACGATTGTAAACTACAAACCAACATTTGTAGTTTCAGACAATCGTGTTAAGGATCTTGTAGACAAGTGTGTGAAAGTTCTTGTAAAAGCATTTGATGTTTTTACTCAGACTATCACAATTGCTGGTATTGAGGCCAAATGCTTTGTGCTTGGTGCTAAATACCTGTTGTTCAATAATGCACTTGTTAAACTTGTCAGCGTTAAAATACTTGGCAAGAAGCAAAAAGGTCTTGAGAGTGCTTTCTTTGCTACCAGCTTAGTTGGTGCAACTGTTAATGTGACACCGAAAAGAACTGAGACTGCCAATATCAGCTTGAATAAAGTTGATGATGTAGCTGCACCAGGAGAGGGTTATATTGTCATTGTTGGTGATATGGCTTTCTACAAGAGTGGTGAATACTACTTCATGATGGCTAGTCCTGATTCTGTGCTTATTAACAATGTTTTTAAAGCAGCTAGAGTTCCATCTTATAACATCGTTTATGATGTTGATGATGATACAAAAAGCAAAATGATTGCAAAACTTGGCTCATCATTTGAATATGATGGTGATATTGATGCTGCCATTGTAAAAGTCAATGAACTACTCATTGAATTTAAACAGCAAAACTTGTGCTTCAGAGCTCTTAAAGACGACGAAAGCATTTTTGTTGAAGCTTATCTCAAAAAGTACAAAATGCCTGCATGCCTTGCAAAACATATTGGTTTGTGGAACATCATAAAGCAAGATTCATGTAAGAAGGGTTTTCTTAGTCTTTTCAATCACTTGAACGAATTGGAAGACGTCAAAGAAACCAATGTTCAGGCTATTAAGGATATTCTTTGTCCTGATCTTCTTCTTGATCTGGATTATGGTGCCATTTGGTACAAGTGCATGCCGAGTTGCTCTGATTTATCTGTGTTGGGGAGTGTCCAACTTTTGATTGGCAACGGTGTGAAAGTAGTTTGTGATGGCTGCAAAGTTTTTGCTAACCAACTTTCAAATGGTTACAATAAGCTCTGTAATGCTGCTCGCACTGATATTGAAATCGGTGGTATACCATTTTCTACTTTCAAAACACCTACAAATACTTTTATTGAAATGACAGATGCTATCTACTCAGTTATTGAACAAGGTAAAGCATTGTCCTTTGGAAATGCTGATGTGCCAGTTTTAGACAATGGTACCATTTCTACTGATGATTGGTCTGAACCCATTTTGCTTGAACCTGCTGAATATGTGAAACCCAAGAACAATGGTAATGTCATTGTTATTGCAGGTTACACATTTTATAAAGATGAAGATGAACACTTCTATCCTTATGGTTCTGGTAAAATTGTGCAGAGAATGTATAATAAAATGGGTGGTGGTGATAAAACTGTCTCATTTTCAGAAGAAGTAGATGTTCAGGAAATTGCACCTGTTACACGTGTTAAACTTGAATTTGAATTTGACAATGAAATTGTAACTGGTGTGCTTGAGCAGGCTATTGGTACTAGATATAAATTTACTGGTACAACTTGGGAAGAATTTGAAGATTCTATTTCTGAAGAACTTGATGCAATTTTTGATACTCTAGCAAACCAAGGTGTCGAACTTGAAGGTTACTTCATTTATGATACTTGTGGTGGCTTTGATATCAAAAATCCAGATGGTATTATGATCTCTCAGTATGATATCAATAATATTGCTGATGAAAAATCAGAAACAGGTGCATCAAGTGAGGAAGAAGAAGTTGAGTCTGTTGAAGAAGACGCTGAGAATGAAATTGAAGCATCTGACTGTGTTGAAGAGACTTCTTCTCAAGAAGATGTTGAAACAGTAGAAGTTGAAGATGTTACTTCTACAGAAGAAGATGTT------------GAAATTGTTGAAGTATCTGCTAAAGATGACCCTTGGGCTGCAGCTGTTGATGTACAAGAAGCTGAACAAATTAAACCTTCTTTACCACCTTTTAAAACAACAAATCTCAATGGTAAAATTATCCTTAAACAACAGGATAACAATTGTTGGATAAATGCTTGTTGCTATCAGCTTCAGGCCTTTGATTTTTTCAACAACGAGGCTTGGGAGAAATTTAAGAAAGGTGATGTTATGGATTTTGTAAATCTTTGTTATGCAGCTACAACACTTGAAAGAGGTCATTCAGGTGATGCAGAATACCTTCTTGAACTTATGCTCAATGATTACAGCACAGCCAAAATAGTACTTGCTGCTAGGTGTGGTTGTGGTGAAAAAGAAATTGTTTTGGAGAGAACTGTATTTAAACTTAGTCCTTTAAGGAACGATTTTAAATATGGTGTTTGTGGTGATTGTATGCAAATTAATAATGCGGGGGTTGTCGAATGTTTGAAAGATCTGGTGTATTTGTCCATGATAGAATGGAAAAACGCTAGACCAGTATCTGATTTTATTGTAAAACCTATTATGCATGCAGTCTACATTGGTTCAACCCAGAGTGGTCATTATATGATAGATGATTGTGAACATGGTTATTGTGTGGATGGTATGGGTATTAAACCATGTAAAGGCAAACTTTACACATCCACATTATTCATCAATGCTAATGTAATGACTAGAGTTGAAAAGCCAAAACAACAATCAAAAGTTGAAAAAGTAGAACAGCAACCAGAAATAGAGGAAAAGAAACCTTCAATTGAAAAAGAGGAATTTCAAAGTCCTAAAAATGATGATCTTATACTTCCATTTTACAAAGCTGGTAAACTTTCCTTTTACCAGGGTGATCTGGATGTTTTGATCAATTTCTTGGAACCTGATGTCATTGTTAATGCTGCTAATGGTGATCTTAAACACATGGGTGGTGTCGCAAGAGCCATCGATGTGTTCACTGGTGGCAAATTAACAGTACGTTCTAAGGATTATCTTAAAAAGAACAAATCTATTGCTCCTGGTAACGCTGTTTTCTTTGAAAATGTCATTGAGCATCTTAGTGTCTTGAATGCGGTCGGACCACGTAATGGTGACAGCCGAGTTGAAGCAAAACTTAACAACGTTTACAAAGCAATTGCAAAATGTGAAGGAAAAATACTAACACCACTTATTAGTGTTGGTATTTTCAATGTCAAACTCGAAACATCATTACAGTGCTTACTTAAGACTGTGAATGATAGAGAATTGAACATCTTTGTATATACCGATCAGGAGAGACAAGCCGTTGAGAATTTCTTCTCTGGTTCTATTCCTGTCAAAGTTACTGAAGATAATGTCAACCATGAACGTGTGTCCGTTTCTTTTGATAAAACATACGGTGAACAACTTAAAGGCACCGTAGTCATTAAAGACAAAGATGTTACAAACCAGTTGCCTAGTGCTTTTGATGTTGGCCAGAAAGTTGTTAAGGCTATTGACTTAGATTGGCAAGCGCATTATGGTTTCCATGATGCTGCTGCCTTCAGTGCTAGTAGCCATGATGCTTACAAATTTGAAGTTGTTACACATAGCAACTTCATTGTACATAAGCAGACTGATAACAACTGTTGGATCAATGCAATTTGTCTTGCATTACAGAGACTTAAACCTCAATGGAAATTTCCTGGTGTTAGAGGTCTCTGGAATGAATTTCTTGAGCGTAAAACACAAGGTTTTGTACATATGCTGTATCACATCTCTGGAGTAAAGAAAGGTGAACCAGGTGATGCTGAATTAACACTTCATAAACTTGGTGATTTGATGGACAATGATTGTGAAATCATTGTCACACATACTACAGCATGTGACAAGTGCGCAAAAGTAGAGAAGTTTACTGGACCAGTTGTAGCAGCGCCTCTTGCAATTCATGGCACTGATGAGACATGTGTGCATGGTGTTAGTGTCAATGTTAAAGTTACTCAAATTAAGGGCACTGTTGCTATCACTTCTTTGAGTGGTCCTATTATCGGAGAAGTACTTGAAGCAACTGGTTACATCTGTTACAGAGGATCAAGTAAAAACGGTCATTACACCTATTATGACAATCGTAATGGATTAATGATCGACGCAGAAAAGGCTTACCATTTTAACAAAGACTTGTTACAGGTCACAACAGCCATTGCAAGTAATTTTGTTGTCAAGAAACCACAAGTAGAAGAAAAGCCTAAG---------------------------ACTCGTGTTTTTAACAGGATTGAAGAATCTCCTAAGGTTATAGTACAAGAACAAAAACTGTTGGCTATTGAAAGTGGTGCTGACTATGCTCTCACTGAATTTGGAAGATATGCTGACATGTTCTTTATGGCTGGAGATAAAATTCTTAGGTTTCTGCTTGAAGTCTTTAAATATCTGCTGGTTTTATTTATGTGTCTTAGAAGTACTAAAATGCCTAAAGTTAAAGTAAAACCACCTCACGCATTTAAAGATCTTGGTGCTAAAGTCAGAACACTCAATTACATGCGACAATTGAACAAACCCTCTGTTTGGCGTTATGCAAAGCTAGTTTTATTGCTAATAGCAATATATAATTTCTTCTATTTGTTTGTCAGTATACCAGTAGTGCATAAATTAGCATGTAATGGTGCTGTACAGGCATATAAAAATTCTAGTTTTGTAAAGTCTGAGGTTTGTGGTAACTCTATTTTATGTAAAGCTTGCTTGGCATCTTATGATGAGTTGGCTGATTTCCAACATCTCCAAGTTACTTGGGATTTTAAATCTGACCCACTCTGGAGTAGATTGGTACAATTGTCTTATTTTGCATTTTTGGCTGTTTTTGGTAACAACTATGTTAGGTGTGTTCTTATGTACTTTGTATCTCAGTACCTCAACCTGTGGCTTTCTTACTTTGGTTATGTAGAGCACAGTTGGTTTTTGCATGTTGTCAACTTTGAATCCATCTCAGCTGAGTTTGTGATCATAGTTATAGTGGTTAAGGCAGTTCTCGTCCTTAAACATATTGTGTTCTCATGCTCAAACCCTTCTTGCAAAACGTGCTCTAAGATTGCAAGGCAGACACGTATTCCTATTCAGGTTGTTGTTAATGGTTCAATGAAAACAGTTTATGTTCATGCTAATGGTACTGGTAAACTCTGCAAGAAACACAATTTCTATTGTAAGAACTGTGATTCTTATGGCTTTGAGAATACATTCATCTGTGATGAAATTGTACGTGATCTCAGTAATAGCGTTAAGCAGACTGTTTACGCCACTGATAGATCTCATCACGAAGTTACAAAAGTTGAATGTTCAGATGGTTTTTACAGATTTTATGTTGGTGATGAATTCACTTCATATGATTATGATGTAAAACACAAGAAGTACAGTAGTCAAGAGGTTCTTAAGAATATGCTCTTGCTTGATGACTTTATTGTGTACAGTCCATCTGGTTCTTCTCTTGCAAATGTTAGGAACGCCTGTGTGTATTTTTCACAACTTATTGGTAAGCCTATTAAGATTGTTAACAGTGATTTGCTTGAAGACCTCTCTGTAGATTTTAAAGGAGCACTTTTCAATGCTAAAAAGAATGTAATTAAGAATTCTTTCAATGTTGATGTCTCAGAATGCAAAAATCTTGACGAATGCTACAGAGCTTGTAATCTTGATGTGTCATTTTCTACATTTGAAATGGCTGTCAATAATGCTCATAGATTTGGTGTTCTGATTACTGACCGTTCTTTTAACAATTTCTGGCCATCAAAAGTTAAGCCTGGTTCAGCCGGTGTTTCGGCCATGGACATTGGTAAGTGTATGACTTCTGATGCTAAGATTGTTAATGCTAAAGTTTTGACTCAACGTGGTAAAAGTGTTGTTTGGCTTAGTCAGGATTTTGCTGCACTTAGCTCAACTGCCCAGAAAGTTTTGGTTAAAACTTTTGTAGAAGAAGGTGTCAACTTTTCACTCACATTCAATGCTGTAGGTTCAGATGATGATCTTCCTTATGAAAGATTCACTGAATCTGTGCCTCCAAAAAGTGGTTCAGGCTTTTTCGATGTAATCAAACAGCTTAAACAAATTATGATGTTGATTCTTGCTTTTATCTTTATTTATGGTTTGTGCTCGGTTTACAGTGTTGCTACACAGTCCTACATTGAATCTGCTGAAGGCTATGACTACATGGTTATTAAGAATGGAATCGTTCAACCTTTTGACGACACTATTTCATGTGTTCATAACACTTACAAAGGATTCGGTGACTGGTTTAAAGCTAAGTATGGTTTTATCCCTACTTTTGGTAAATCATGCCCAATTGTTGTAGGAACTGTTTTTGACCTTGAAAATATGAGACCAATTCCTGACGTACCTGCATATGTTGCTCTGGTGGGTAGATCCCTTGTTTTTGCTATTAATGCTGCTTTTGGTGTTACTAACATGTGCTATGATCATACTGGCAGTGCAGTGAGTAAGGACTCTTACTTTGACACTTGTGTGTTTAATGCTGCATGCACCACTCTTACAGGTCTTGGTGGTACAATTATATATTGTGCAAAGCAAGGTTTAGTTGAAGGTGCTAAGCTCTATAGTGATCTTATGCCGGATTATTATTATGAGCATGCTAGTGGTAACATGGTTAAATTGCCAGCAATTATTAGAGGACTTGGTCTACGTTTTGTGAAAACACAGGCTACAACTTATTGTAGAGTGGGAGAGTGCATTGATAGTAAAGCTGGTTTTTGCTTTGGTGGCGACAACTGGTTTGTCTACGATAATGAGTTTGGCAATGGATATATCTGTGGTAATTCTGTTCTAGGATTCTTTAAGAATGTCTTCAGACTCTTTAACTCTAACATGTCTGTGGTAGCTACATCAGGTGCTATGCTTGTTAACATTATTATTGCATGCCTAGCTATTGCAGCGTGTTATGGTGTTCTTAAGTTTAAGAAAATTTTTGGTGATTGTACTCTCCTCATTGTTATGATCATTGTCACACTTGTTGTGAACAATGTGTCTTACTTTGTTACTCAAAACACATTCTTTATGATCATATATGCCATTGTTTACTATTTTACAACAAGGAAACTTGCGTATCCTGGCATTCTTGATGCTGGATTCATTATTGCTTACATTAACATGGCTCCATGGTATGTGATTACTGCATACATTCTTGTTTTCCTCTATGACTCACTCCCTTCATTGTTCAAACTCAAAGTTTCAACAAATCTTTTTGAAGGTGACAAATTCGTGGGTAACTTTGAATCTGCTGCTATGGGTACTTTTGTTATTGATATGCGTTCATATGAGACTATTGTTAATTCTACTCCTATTGAGAGAATTAAATCATATGCTAACAGCTTCAATAAATATAAGTATTATACAGGTTCAATGGGAGAAGCTGACTACAGAATGGCTTGCTATGCTCATCTTGGTAAAGCTCTTATGGACTATTCTGTTAATAGAACAGACATGCTTTACACACCTCCTACCGTTAGTGTGAACTCCACACTTCAGTCTGGTTTGAGGAAAATGGCACAGCCTAGTGGTCTTGTAGAGCCTTGCATTGTAAGAGTGTCTTATGGTAACAATGTGCTTAATGGTTTGTGGCTGGGAGATGAAGTCATTTGCCCTAGACATGTTATTGCTAGTGATACCACACGTGTTATCAACTATGAAAATGAAATGTCCAGTGTGAGACTTCACAATTTCTCAGTTTCTAAGAATAATGTGTTTTTGGGTGTTGTGTCTGCCAAATATAAGGGTGTGAACCTTGTACTTAAAGTTAACCAGGTCAATCCTAACACACCAGAACACAAATTTAAGTCTATTAAAGCTGGTGAAAGTTTTAACATTCTTGCTTGTTATGAAGGATGTCCTGGCAGTGTTTATGGTGTCAACATGAGAAGTCAAGGTACCATTAAAGGATCTTTTATAGCTGGTACTTGTGGATCAGTAGGTTACGTGTTAGAAAATGGAACTCTCTATTTTGTATACATGCATCACCTAGAACTTGGAAATGGCTCACATGTTGGTTCCAACCTTGAAGGAGAAATGTACGGTGGTTATGAAGATCAACCTAGCATGCAATTGGAAGGTACTAATGTCATGTCATCAGATAATGTAGTTGCATTCTTATATGCCGCACTTATCAACGGTGAAAGGTGGTTTGTTACAAACACATCAATGTCATTAGAATCATACAATACATGGGCCAAAACTAACAGTTTCACAGAACTTTCTTCAACTGATGCTTTTAGCATGTTGGCTGCAAAAACTGGTCAAAGTGTTGAGAAACTACTAGATAGCATTGTAAGACTCAACAAAGGTTTTGGAGGTCGTACTATACTTTCTTATGGCTCATTGTGTGACGAGTTCACTCCAACTGAGGTCATAAGGCAAATGTATGGTGTAAATCTTCAGGCTGGTAAAGTAACATCTTTCTTTTACCCTATTATGACTGCAATGACAATTCTCTTTGCGTTTTGGCTTGAATTCTTTATGTACACACCCTTCACATGGATTAATCCAACTTTTGTTAGCATTGTATTGGCTGTCACAACCTTAGTCTCAACGGTTTTTGTCTCAGGAATTAAACATAAGATGTTGTTCTTCATGTCTTTTGTTCTTCCTAGTGTTATACTTGTGACAGCACACAATTTGTTCTGGGACTTTTCTTACTATGAGAGTCTTCAGTCAATTGTTGAGAATACTAACACTATGTTTTTGCCTGTGGACATGCAAGGTATCATGCTCACAGTGTTTTGCTTCATTGTCTTTGTTACATACAGTGTTAGATTCTTTACTTGTAAACAGTCATGGTTCTCACTTGCTGTGACAACTGTTCTTGTGATCTTTAACATGGTTAAAATCTTTGGAACATCTGATGAACCATGGACTGAAAACCAAATTGCTTTCTGCTTTGTAAACATGCTTACTATGATTGTCAGTCTTACTACAAAGGATTGGATGGTTGTCGTTGCGTCATACAGAATTGCTTACTATATTGTTGTATGTGTAATGCCGTCTGCTTTTGTATCTGACTTCGGTTTTATGAAGTGTATTAGCATTGTTTACATGGCTTGTGGTTATTTGTTTTGTTGCTATTATGGTATACTCTATTGGGTTAACCGATTCACATGCATGACATGTGGTGTTTATCAATTCACTGTGTCTGCAGCTGAACTTAAATACATGACTGCTAACAACCTTTCTGCACCTAAGAACGCATATGACGCTATGATTCTTAGTGCTAAATTGATTGGTGTTGGAGGTAAGAGAAACATAAAAATTTCAACTGTACAGTCAAAACTTACAGAGATGAAATGTACTAATGTTGTCTTGCTTGGTCTTTTATCTAAAATGCATGTTGAGTCTAACTCAAAAGAGTGGAACTATTGTGTCGGACTACACAATGAGATTAACCTTTGTGACGATCCTGAGATCGTTCTTGAAAAATTGTTAGCTCTCATTGCATTTTTCTTGTCCAAACACAACACTTGTGACCTTAGCGAACTTATTGAATCGTATTTTGAGAACACTACAATACTTCAGAGTGTGGCTTCTGCCTATGCTGCATTGCCTAGCTGGATTGCACTTGAAAAGGCTCGTGCTGATCTTGAAGAGGCTAAGAAGAATGATGTTAGCCCTCAAATTCTGAAACAGCTTACTAAGGCTTTTAACATTGCCAAGAGTGACTTTGAGCGCGAAGCATCAGTGCAAAAGAAGCTCGACAAAATGGCTGAGCAGGCTGCAGCTAGTATGTATAAAGAGGCACGAGCTGTAGACAGAAAGTCAAAGATTATTTCTGCCATGCATAGCCTACTCTTTGGTATGCTTAAGAAACTTGACATGTCTAGTGTCAACACTATTATTGACCAGGCTCGTAACGGTGTTTTACCTTTAAGTATTATTCCAGCCGCATCAGCTACAAGACTTGTTGTTGTAACACCTAGCCTTGAAGTATTTTCCAGGATTAGGCAAGAAAACAACGTTCATTATGCTGGTGCTATTTGGACTATTGTTGAAGTTAAAGATGCTAATGGTTCACATGTACATCTTAAAGAAGTCACTGCTGCTAATGAATTAAATCTTACTTGGCCATTGAGCATTACTTGTGAGAGAACCACAAAGCTTCAGAACAATGAAATTATGCCAGGTAAACTTAAGGAAAGAGCTGTCAAAGCGTCATCAACTCTCGATGGTGAAGCCTTCGGCAGTGGAAAGGCTCTTATGGCAGCTGAAAGTGGCAAAAGCTTTATGTATGCATTCATAGCCTCAGAAAACAATCTTAAGTATGTTAAGTGGGAGAGCAATAATGATATCATACCTATTGAACTTGAAGCTCCATTGCGGTTCTATGTTGATGGTGCTAATGGTCCTGAAGTCAAGTATTTGTATTTTGTCAAAAACTTAAACACTCTTAGACGTGGTGCAGTTCTTGGTTATATCGGTGCAACAGTTCGTCTGCAAGCTGGTAAACCTACTGAACATCCATCTAATAGTAGTTTATTGACATTGTGTGCTTTTGCACCTGATCCTGCTAAAGCATATGTTGATGCTGTTAAAAGAGGTATGCAACCAGTTAATAACTGTGTAAAAATGCTCTCAAATGGTGCTGGTAATGGTATGGCTATTACAAATGGTGTCGAAGCTAACACACAACAAGACTCTTATGGTGGTGCTTCGGTTTGTATTTACTGCAGATGCCATGTTGAACACCCTGCTATTGATGGACTATGCCGCTATAAAGGCAAGTTCGTGCAAATACCAACTGGCACCCAAGATCCAATTCGTTTCTGTATTGAAAATGAAGTTTGTGTTGTCTGTGGCTGTTGGTTTAACAATGGTTGCATGTGCGATCGTACTTCTATGCAGAGTTCTACTGTTGATCAGAGTTATTTAAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTATAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACAAATTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTAACTACAAGGAGGGTAGATGTGAGTTTGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTATGCTATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCTTGCACTGAAGAATTCTTTGAAAACAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACACGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGACGCAATAGTGGAAAAAGGTTATATAGGTATTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGAGATTTCGTGAAAACTGCTCCAGGTTTTGGTTGCGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTTACTGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATACCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTCGGACCACTTGTCCGTAAAGTTCACATCGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTGTAGTATGGAATCTCGATGTAAAATTAGACACAATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGATCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTGTTACATACCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGGTTCTTTGAAGAGGGATCTGAGTTAACATTAAAACATTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTACTATCGCTACAACAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTATAAAATAGTTGGCAAATATTTTGAATGTTACGACGGTGGGTGCATTAACGCTCGTGAAGTTGTTGTTACAAACTATGACAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTATGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTCTACCCACAATGACTCAGATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACAACGAGACAATACCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCCACTGTTGTCATTGGTTCAACCAAATTTTATGGTGGATGGGACAACATGCTTAAAAATTTAATGCGTGATGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCCTCTGCCATGATATTGGGTTCTAAGCATGTTGGTTGTTGTACACATAGTGATAGATTCTACCGTCTCTCCAATGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTACTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCTTACGCTAATTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGATTCAAACGCTTGTAACAATGTTACAGTAAAGTCCATACAACGTAAAATCTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTTTGCTACAACAAAGATTATGCAGATCTAGGCTATGTAGCTGACATTAATGCTTTTAAGGCAACGCTCTATTATCAGAATAATGTCTTCATGTCTACTTCTAAATGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTACTACCTTCCCTATCCAGACCCATCCAGAATTTTGTCAGCTGGTGTGTTTGTCGATGACATAGTTAAAACAGATAATGTTATCATGTTAGAACGTTACGTGTCATTGGCTATTGACGCATACCCGCTCACAAAGCACCCTAAGCCTGCCTACCAAAAAGTGTTTTACACTCTGCTAGATTGGGTTAAGCATCTACAGAAAAATTTGAATGCAGGTGTTCTTGACTCGTTTTCAGTGACAATGCTAGAAGAAGGTCAAGACAAGTTCTGGAGTGAAGAGTTTTATGCTAGCCTCTATGAAAAATCCACTGTTTTGCAAGCTGCAGGCATGTGTGTTGTATGTGGTTCGCAAACTGTACTTCGGTGTGGAGACTGTCTTAGGAGACCACTTTTATGTACAAAATGTGCTTATGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGGACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTTTATACAAAAGTAGTGCAGTCGGCTCAGAGGATGTTGAAGACTTCAACAAACTTGCAATTTCTGACTGGACTAATGTAGAAGACTACAAACTTGCTAACAATGTCAAAGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCCTATGCCATATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAACAGAAATTCAGTTTTCACGTGCTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGCACAAGTACTTACAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCATAATGTGAGTCCTCTTAAAGCCACAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAACATAGCGGAAGCCTATAATACACTGGTGCCTTACTATCAAATGATAGGTAAGCAAAAATTTACAACTATCCAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAGGCAAGAATCGTCTACACTGCATGTTCTCACGCGGCTGTAGATGCCCTATGTGAAAAAGCAGCCAAGAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGATTGCTACACAGGTTTTAAGCCTAACAACACCAATGCGCAGTACTTGTTTTGTACTGTCAATGCTCTACCAGAAGCAAGTTGTGACATTGTTGTAGTCGATGAGGTTTCTATGTGTACTAATTATGATCTTAGTGTCATAAATAGCAGACTGAGTTACAAACATATTGTTTATGTTGGAGACCCACAGCAATTACCAGCTCCTAGAACTCTGATTAACAAAGGTGTACTTCAACCACAGGATTACAATGTTGTAACCCAAAGAATGTGCACACTAGGACCTGATGTCTTCTTGCATAAATGTTACAGATGCCCAGCTGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAACAAATTTGTACCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAACAAGCAACTAGAGGTTGTCAAGGCATTTTTAGCACATAATCCAAAATGGCGTAAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACACAGACTGTGGATTCCGCGCAGGGTAGTGAGTATGATTATGTCATTTACACACAGACTTCTGATACACAGCATGCTACTAATGTTAACAGATTCAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACTATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGCTTACAAGCAAAACCTGAAACATGTGGTTTGTTTAAAGATTGTTCAAAGAACGAACAATACATACCACCTGCTTATGCAACAACATATATGAGCTTGTCTGATAACTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTATAAAGGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGCTATCACACATTGTTTTGCACGCGAGACTTTGCTATGCGTAATGTTAGAGCATGGCTTGGTTTTGACGTCGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAATGTACCCTTACAGCTGGGTTTCTCAAATGGTGTGGATTTTGTAGTACAAACTGAGGGATGTGTTATTACTGAAAAAGGTAATAGCATTGAAGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTGCACACTTGATTCCACTTATGAGAAAGGGTCAGCCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTCGACGGCTTGTCAGACATTCTGATATTTGTGCTCTGGGCTGGTGGTCTTGAACTTACAACTATGAGATACTTTGTTAAAATTGGAAGACCTCAAAAATGTGAATGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATGTGTCTATGCTTGTTTCAAGCATGCATTAGGATGTGATTATTTGTACAATCCTTATTGCATTGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTTGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCTTTTATTGACAACGAAGAAAAGATCAATAAAGCTGGTCGCATAGTACAGTCACATGTCATGAAAGCTGCTCTGAAAATTTTTAATCCTGCTGCAATTCACGATGTGGGTAATCCCAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGACCGTGATCCTATTAATAACAATGTTAGATGTCTGGAGTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTGTTTTGGAACTGTAATGTGGACATGTACCCAGAGTTCTCAATTGTTTGTAGGTTTGATACTCGAACTCGCTCTAAATTATCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTAAACAATCATGCTTTCCACACACCAGCTTATGATAGAAGAGCATTTGCTAAGCTTAAACCAATGCCATTCTTCTACTATGATGATAGTAGTTGTGAACTTGTTGATGGGCAATTAAACTATGTACCACTCAAGTCAAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTATAGAGCGTATGTTGAGGATTATAACATGTTTATGCAGGCTGGCTTTACAATATGGTGTCCTCAAAATTTTGACACTTACATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTCCAGAGTCTAGAAAATGTGGCATTTAATGTTGTTAAGAAAGGTGCCTTCGCCGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAAATGTATTTTCACAAATAAGACTAGTTTACCTACAAATGTAGCTTTTGAGTTATATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGAAATTTGGGTGTTGTCGCAACATACAAATTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACCAAACAAGTGTGCTCGTATACTGACCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAACGCTTTACTACTACAAAAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAATTACAATATGGCTTTTTGAATGATCTACCTGTAAGTACTGTTGGAAACAAACCTGTCACATGGTATATCTATGTGCGCAAGAACGGTGAGTACGTCGAACAAATTGATAGTTACTACACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTCTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCTGTGCAAGAATTTATGACCAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCTTCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGCTGTGGTGTGAGAATTCACAGATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGAATCCTGGCTATAGCATGCCTACATTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAGATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAATTGTGTCAATACCTTAACACTACTACTGTGTGTGTACCACACAAAATGCGAGTTCTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTACGAAGGTGGTTACCAGACGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAATTTGATTTGCTTATCTCTGATTTGTATGATGGCTCCACGAAATCAATTGACGGTGAAAACACGTCAAAAGATGGTTTCTTTACTTATATCAATGGTTTCATTAAGGAGAAACTATCACTTGGTGGATCTGCCGCCATCAAAATCACAGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTACTGGACTGTGTTTTGTACAAGTGTTAATACGTCATCGTCAGAAGGTTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACACAACTCAGTCCTAGACACCCCAAAATTCAAGTGCCGTTGTAACAACGCGCTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCGTTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGCAAGCTACTAAACTTTGGTAATCATTTAGTTAATGTGCCA >28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ATGAGTTCCAAACAATTTAAGATCCTCGTTAATGAGGACTACCAAGTCAACGTGCCTAGTCTTCCTTTCCGTAACGCTTTGCAGGAAATTAAGTACTGCTACCGTAACGGTTTTGAGGGCTATGTTTTCGTACCTGAATACCGTCGTGACCTAGTTGATTGCGATCGTAAGGATCACTACGTCATTGGTGTTCTGGGTAACGGAATAAGTGATCTTAAACCTGTTCTCCTTACCGAACCTTCCGTCATGTTGCAAGGCTTTATTGTTAGAGCTGGCTGCAATGGCGTTCTTGAGGACTTTGACCTTAAAATCGCCCGTACTGGAAATGGCGCCATATATGTAGATCAATACATGTGTGGTGCGGATGGAAAACCAGTTATTGAAGGTGAGTTTAAGGATTATTTCGGTGATGAGGACGTTATCATCTATGAAGGAGAGGAGTACCATTGTGCCTGGCTAACAGTGCGCGATGAAAAACCTTTATGTCAACAAAATCTCCTCACAATTAGGGAAATCCAATACAATCTGGACATCCCACATAAGTTGCCTAATTGTGCTATCAGAGAGGTAGCACCACCAGTCAAGAAGAATTCCAAGGTTGTTCTTTCTGAAGAGTATAAAAAGCTCTATGACATCTTTGGTTCACCATTTATGGGCAATGGGGACAGTCTTAACAAGTGTTTTGACAGCCTCCACTTCGTTGCTGCCACTCTTAAGTGTCCTTGTGGCGCCGAGAGTAGTGGTGTTGGTGATTGGACTGGTTTTAAGACTGCTTGTTGTGGTCTTCAAGGCAAAGTTAAAGGCGTCACATTAGGTGCTGTTAAACCAGGTGATGCCGTTGTCACTAGCATGAGTGCAGGTAAGGGTGTAAAATTCTTTGCTAATAGTGTACTCCAATATGCTGGTGATGTGGAAAATGTCTCTGTTTGGAAAGTGATTAAAACTTTCACTGTTAATGAGACTGTCTGCACCGCTGATTTTGAAGGCGAATTGAACGACTTCATTAAACCAGAGAGTACTTCACCTGTTTCATGTTCTATTAAGAGAGCGTTCATCACTGGTGAGGTTGATGATGCAGTCCATGACTGTATTATCTCAGGAAAGTTGGACCTTAGTACTAACCTTTTTGGTGGTGCTAACCTGCTTTTCAAGAAAACGCCCTGGTTTGTGTTAAAGTGTGGTGCTATTTTTGCTGATGCTTGGAAAGTTGTTGAAGAACTGCTTTGTTCTCTCAAACTTACATACAAGCAAATCTATGATGTAGTAGCATCACTTTGCACTTCTGCCTTTACTATTATGGATTACAAACCTGTATTTGTAGTTGCATCTAATAGTGTTAAGGATCTCGTTGACAAGTGTGTCAAAATTCTTGTGAAAGCCTTTGATGTTTTCACACAGACAATTACCATTGCGGGTGTGGAGGCTAAGTGCTTTGTGCTTGGCTCTAAATACTTGCTTTTTAATAATGCACTTGTTAAGCTTGTCAGCGTTAAAATACTTGGCAAGAGGCAGAAAGGTCTTGATAGTGCATTCTTTGCCACTAATTTGATTGGTGCTACTGTTAAGGTGACACCACAAAGAACTGAGGCAGCCAATATTAGTTTGAATAAAGTAGATGATGTTGTCACACCTGGTGAAGGTCATATTGTCATTGTAGGCGACATGGCTTTTTACAAGAGTAGAGAGTACTACTTTATGATGGCAAGTCCTGATTCAGTTCTCATTAATAACGTTTTTAAAGCAGCTCGAGTGCCATCTTATAACATTGTTTACAATGTGGATGATGATACCAAGAGTAAGATGTCATCTAAAATTGGAACGCCATTTGAATTTGATGGTGATGTGGATGCTGCTATTGTTAAGATTAACGACTTACTTGTTGAGTTTAGACAAGAAAAGTTTTGTTTCAGAGCACTTAAGGATGGTGAAAGTATCTTGGTTGAGGCATACCTTAAGAAATATAAAATGCCAATTTGTCTCAAAAATCATGTTGGTTTATGGGACATCATAAGACGCGATTCTGATAAGAAGGGTTTTCTTGACACTTTCAGTCATCTTAATGAATTGGAGGATGTCAAGGATGTAAAAATTCAGTCTATTAAAAATATCCTTTGCCCTGACCTTCTGTTAGAATTAGATTTTGGTGCAATTTGGTATAGATGTATGCCAGCCTGCTCTGATGTGTCTATTTTGGGTAATGTTAAAATCATGCTAGGTAATGGTGTTAAAGTGATTTGTGATGGCTGCCATGGTTTTGCTAACCGTTTAACGGTTAATTACAGCAAACTGTGTGACACAGCTCGTAAAGACATTGAAATTGGTGGTATACCATTTTCCACCTTTAAAACACCATCTAGCAGCTTCATTGACATGAAAGATGCCATCTATTCTGTGGTTGAATACGGTGAAGCATTTTCCTTTAAGACTGCAAGTGTACCTGTAACTAATAGTGGTACTGTCAAAAATGACGACTGGTCAGACCCCATTTTGTTAGAACCTGCAGATTATGTCGAACCTAAAGATAACGGTGATGTAATTGTCATTGCTGGATACACCTTTTACAGGGATGAGAACGATCACTTTTATCCATATGGTTCCGGCATGGTTGTGCAGAAGATGTACAACAAGATGGGTGGTGGTGACAAGTCAGTTTCATTTTCAGACAACGTTAATGTTAAAGAGATAGAACCTATTACACGTGTCATGCTAGAATTTGAATTTGACAATGAGGTGGTAACACAGGTTCTTGAAAAAGTCATTGGTGCCAAATATAAGTTTACAGGTACCACTTGGGAAGAATTTGAAGATTCTATTTCTGAGAAACTTGACAAGGTTTTCGACGCGCTTGCTGAACAGGGTGTAGAACTTGAAGGTTACTTCATTTATGACACTTGTGGCGGATTTGACATTAATAATCCAGATGGTGTTATGATTTCACAGTATGATCTTAACTCAGCTGTTGATGTCAGAAGTGATTCTGATGCAAGCGTGGAAGACACATCTTCGATTTCTGATAACGAAGATGTTGAACAAATAGAAAAAGAGAACGTCTCAGCTGCTGATGTTACAGTTGTAGATGTTGAAGAATTTGTTGAGCAAGTTTCTCTTGTTGACACCGAAGAACAACTCCCCTCAGTAGAGGAAAAAGTTGAAGGCTCTGCTAAAGATGACCCGTGGGCTGCTGCTGTTGATGAACAGGAAGCTGAACAACCTAAACCTTCCTTAACTCCATTTAAGACAACAAATCTTAATGGTAGAATTATTCTTAAACAACAAGATAACAATTGTTGGATAAACGCTTGCTGTTACCAGTTGCAAGCTTTTGACTTTTTCAACCATGAATTATGGGATGGTTTTAAGAAAGATGACGTTATGCCTTTCGTAAACTTCTGTTATGCAGCTCTAACTTTGAAGCAGGGTGATTCAGGAGACTCAGAATACCTTTTGGAGACGATGCTCAATGATTATAGTACAGCTAAAGTTGTTCTTAGTGCTAAGTGTGGCTGTGGTGTTAAAGAAATAGTTTTAGAGCGAACTGTGTTTAAGCTCACACCTCTTAAGAATGAGTTTAAATATGGTGTCTGTGGTGACTGTAAACAAATTAACATGTGTAAGTTTGCAAGCGTGGAAGGTTCAGGTGTTTTTGTTCATGATAGA---ATTGAAAAACGAACACCTGTGTCACAATTCATTGTGACACCTATTATGCACGCAGTTTACACAGGTACAACACAGAGTGGTCATTACATGATTGAGGATTGCACTCATGATTATTGTGTGGATGGTATGGGAGTTAAACCCCGTAAACAAAAGTTTTACACATCCACCTTGTTTCTTAATGCAAATGTAATGACA---------------------------------------GCTGACTCTAAAACTACAATCGAACCAACTGCACCTGTTAAGGATAAGCTTGTAGAAGAATGTCAAAGTCCTAAAGACTTTATATTACCCTTTTACACAGCGGGGAAAGTGTCATTTTACCAAGGAGATTTGGATGTTTTGATTAACCTTCTTGAACCTGACGTTGTTGTTAACGCTGCTAATGGTGATCTTAGGCACATGGGTGGTGTTGCTAAAGCCATTGATGTGTTCACAGGTGGTAAGTTGACGAAACGTTCTAAAGAATATCTTAGGACTAATAAAACAATAGCTCCTGGTAATGCTGTGCTTTTTGAAAACGTACTTGAGCATCTTAGTGTATTGAATGCTGTCGGACCACGTAATGGTGACAGTAGAGTTGAAGGTAAACTCTGTAACGTTTACAAAGCAATTGCCAAGTGTGACGGTAAGATATTAACACCACTTATTAGTGTTGGTATCTTCAAAGTCAAACTGGAAGTTTCATTGCAGTGTCTACTTAAAACTGTCACAGATAGGGAATTAAATGTCTTTGTTTACACTGACCAAGAGAGAATTACCATAGAAAATTTCTTCAATGGTACTATTCCTGTCAAGGTAACGGAAGACACTGTGAATCAAAAGCGTGTGTCTGTGGCACTTGATAAAACTTATGGTGAGCAACTCAAAGGCACTGTTGTTATTAAAGACAAAGATGTTACTAACCAGTTGCCAAGTGTGTCAGATGTTGGTGAAAAAGTCGTTAAGGCATTGGATGTTGATTGGAATGCTTACTATGGCTTTTCAAATGCAGCGGCTTTTAGTGCCAGTTCCCATGATGCTTATATATTTGAAGTTGTAACACACAACAACTTCATTGTTCATAAGCAGACTGATAATAATTGTTGGGTTAATGCAATTTGTTTAGCATTACAAAGGCTTAAACCAACATGGAAGTTTCCTGGTGTTAAAAGTTTGTGGGATGATTTTCTTGTTCGTAAAACTGCTGGATTTGTCCACATGCTATACCACATTTCAGGCTTAAAGAAAGGACAACCTGGTGATGCTGAGTTGACTTTACATAAGCTTGGTGAGTTGATGTTGAGTGATAGTGCTGTCACCATCACACATACAACTGCATGTGACAAGTGTGCAAAAACTGAAACTTTTACAGGCCCTGTGATAGCAGCACCTCTTCTGATCCATGGCACTGATGAAACCTGTGTTCATGGTGTAAGTGTTAATGTTAAAGTGACAAGTGTTAGAGGCACTGTGGTTATCACTTCCTTAATCGGTCCTGTTGTAGGAGATGTTATTGATGCAACTGGTTATATTTGTTATACTGGATTGAACTCACGTGGTCATTATACCTATTATGATAATCTTAATAGTTTATTGGTTGATGCTGAAAAGGCCTATCATTTTGAGAAAAACCTCTTACAGGTTACAACAGCCATTGCTAGTAATTTTATTGCCTACACACCTAAGAGTGAGATCTATCCTAAGGTTCAACCAGTTAAAGAATCACATACAGCTCGTGTTTTTAGTGAGGTTGAAGAAATTCCTAAAAATGTAGTTCGTGAAACAAAATTGCTAGCTATTGAGAGTGGTGCAGATTACACACTCTCAACACTTGGTAAATATGCTGATGTTTTCTTTATGACCGGTGATAAAATTCTTAGGTTTCTCCTTGAAGTCTTTAAATATTTATTGGTTGTTTTTATGTGTCTTAGAAAATCTAAGATGCCTAAAGTTAAGGTAAAACCACCGCATGTATTCAAAAACTTAGGTGCTAAAGTTAGGACATTGAATTACGTAAGACAATTGAACAAACCAGCGTTATGGCGTTACGTAAAACTAGTGTTACTTTTAATAGCATTGTACCACTTTTTCTACTTGTTTGTTAGTATACCAGTAATGCACAAATTAGTGTGTAGTAGTAGTGTACAAGCGTATAGTAATTCTAGTTTTGTGAAATCAGAAGTTTGTGGTAATTCTATTCTATGCAAGGCGTGTCTGGCATCTTATGATGAATTGGCTGATTTTGATCATCTTCAGGTGTCATGGGATTATAAGTCGGATCCGCTATGGAATAGAGTTATACAATTGTCTTACTTCACATTCTTGGTTGTTTTTGGCAATAATTATGTTAGATGTCTTCTTATGTATTTTATCTCTCAGTACCTTAACTTGTGGTTGTCTTATTTTGGTTATGTTAAGTATAGTTGGTTTTTGCATGTCATCAACTTTGAATCAATTTCTGTTGAATTTGTGATCATAGTTGTAGTTTTTAAGGCAGTTCTCGCACTTAAACACATCTTCTTTTCATGCAATAACCCATCATGTAAGACTTGTTCTAAGATTGCTAGGCAGACACGTATTCCTATACAAGTTGTGGTTAATGGTTCAATGAAGACTGTGTATGTCCACGCTAATGGTACTGGTAAACTCTGCAAAAAGCATAATTTCTACTGTAAAAATTGTGACTCTTACGGTTTTGACCACACATTCATCTGTGACGAGATTGTGCGTGACCTGGGTAACAGTATCAAGCAAACTGTTTATGCCACTGATAGATCATACCAGGAAGTCACAAAGGTTGAATGCTCTGATGGCTTTTACAGGTTTTATGTTGGTGATGAATTCACGGCATACGACTATGATGTAAAAAACAAGAAGTATAGTAGCCAGGAAGTGCTTAAAACTATGTTCCTGCTTGATGACTTCATCGTCTATAGTCCATCAGGGTCTTCCCTCGCTAGTGTTAGAAATGTCTGTGTTTATTTTTCACAACTGATTGGTAGGCCTATTAAAATTGTTAATAGTGAACTTCTTGAGGATTTATCTGTAGACTTTAAGGGAGCACTTTTTAATGCTAAGAAAAATGTTATTAAAAACTCTTTTAATGTTGATGTGTCAGAATGTAAAAACCTTGAAGAGTGTTATAAAGCATGCAACCTTGATGTGACATTTTCTACTTTTGAAATGGCTGTTAATAACGCTCATAGATTTGGTATATTGATTACAGACCGCTCCTTTAACAATTTTTGGCCATCAAAAATTAAGCCAGGTTCTTCTGGTGTCTCTGCTATGGACATTGGTAAGTGCATGACTTTTGATGCAAAGATTGTTAATGCAAAGGTTTTAACGCAACGAGGTAAAAGTGTTGTATGGCTTAGTCAGGACTTTTCTACTCTTAGTTCTACAGCACAGAAAGTTTTAGTTAAAACTTTTGTAGAAGAAGGTGTGAACTTTTCACTAACGTTTAATGCTGTGGGTTCAGATGAAGACCTCCCCTATGAGAGATTCACTGAATCAGTTTCACCAAAGAAAGGTTCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAGATCTTCTGGTGTTTGGTTTTGTTTATTACCTTGTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGATGGTTATGAATACATGGTTATTAAGAATGGCATTGTTCAACCATTTGATGATTCTATTAACTGTGTACATAACACATACAAAGGCTTTGTTATGTGGTTTAAAGCTAAATATGGTTTTGTACCTACATTCGACAAGTCTTGTCCTATTGTTTTAGGAACTGTTTTTGACTTAGGCAATATGAGACCAATCCCTGATGTGCCAGCTTATGTAGCACTTGTTGGTAGATCCCTAGTGTTTGCGATTAATGCAGCATTTGGTGTTACTAATGTTTGTTATGATCATACAGGTTCTGCTGTGAGTAAAAACTCTTATTTTGATACCTGTGTATTTAATGCTGCTTGCACCACTCTATCAGGCCTTGGAGGTACAATTGTTTATTGTGCCAAACAAGGACTTGTGGATGGTGCTAAACTTTATAGCGAATTGATGCCTGACTATTTTTATGAGCACGCTAGTGGTAACATGGTTAAAATACCAGCCATTATTAGGGGTTTTGGTCTGAGATTCGTAAAAACACAGGCTACAACTTATTGCAGAGTAGGGGAGTGTGTTGAAAGTCAGGCCGGTTTTTGCTTTGGTGGTGACAACTGGTTTGTTTATGATAAAGAGTTTGGTGATGGTTATATTTGTGGAAGCTCTACATTGGGTTTTCTCAAAAATGTCTTTGCTCTCTTTAACTCTAACATGTCTGTAGTAGCCACATCCGGTGCTATGTTGGTTAACATTATCATCGCATGTTTGGCTATAGCGGTCTGTTATGGTGTTCTTAAATTTAAGAAAATCTTTGGTGATTGTACTCTCCTAGTTGTTATGATTATTGTTACATTGGTTGTTAACAATGTTTCTTATTTTGTGACCCAAAACACATTCTTTATGATTGTTTATGCCATTATTTATTACTTTACAACAAGGAAATTATCATACCCTGGTATCTTGGATGCAGGATTCATTATTGCCTATGTGAACATGGCCCCATGGTATGTGCTTGTGCTGTACATAGTGGTCTTCTTATATGATTCTCTACCCTCACTATTCAAACTTAAGGTTACAACAAACCTTTTTGAAGGGGATAAATTTGTTGGTAGTTTTGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAGACACTTGTTAATTCTACATCCTTGGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTACAAGTACTATACTGGTTCAATGGGAGAGGCCGATTACCGCATGGCTTGTTATGCTCATTTAGGTAAGGCATTAATGGATTATTCTGTCTCAAGAAATGATGTTCTTTACACACCACCAACGGTCAGTGTTAATTCAACATTACAGTCAGGACTGAGAAAAATGGCACAGCCTAGTGGTATTGTGGAACCCTGCATTGTGAGGGTAGCCTATGGCAATAATGTGCTTAATGGTTTGTGGCTTGGAGATGAAGTTATCTGCCCTAGACACGTCATTGCAAGTGACACATCACGTGTGATCAATTATGACAATGAGTTGTCCGGTGTGCGGTTACATAAATTCTCTATAGCCAAAAATAATGTGTTTTTGGGCGTTGTGTCTGCCAAGTATAAGGGTGTGAACCTTGTGCTTAAGGTTAATCAGGTAAACCCCAACACACCAGAACACAAATTCAAATCCGTGAAGTCTGGTGAGAGTTTTAACATTCTCGCTTGTTATGAAGGCTGTCCCGGTAGTGTCTACGGTGTGAACATGAGAAGTCAGGGTACCATCAAAGGTTCATTTATTGCTGGTACCTGTGGGTCAGTAGGTTATGTATTAGAAAATGGAATACTCTATTTTGTGTACATGCACCACTTAGAATTAGGTAATGGCTCTCATGTTGGTTCAAACCTTGAGGGGGTAATGTATGGCGGTTATGAAGATCAACCTAGCATGCAATTGGAGGGTACTAACGTCATGTCATCAGATAATGTAGTTGCATTTTTGTATGCTGCTCTTATTAATGGTGAAAGATGGTTTGTTACAAATGCATCAATGACGTTAGAATCTTACAATGTATGGGCCAAAACCAACAGTTTTACGGAACTTGTTTCAACTGATGCTTTTAATATGTTGGCTGCAAAAACTGGTTATAGTGTTGAGAAGTTGCTTGAATGTATTGTTAGACTCAACAAAGGTTTTGGAGGACGCACTATACTCTCTTATGGTTCATTGTGTGATGAATTCACACCTACGGAAGTTATAAGGCAAATGTATGGTGTTAATCTTCAGAGTGGTAAAGTGAAATCTCTCTTTTACCCTGTGTTGACAGCCATGGCTATTCTATTTGCTTTTTGGTTAGAGTTCTTTATGTACACACCCTTTACATGGATTAATCCATCGTTTATCAGTGTTATTCTAGCTATTACAACTTTTTTCTCTGTGTTATTAGTTGTTGGGATTAAACACAAAATGTTATTCTTTATGTCTTTTGTAATGCCTAGTGTTGTGTTGGCCACCGTTCATAATGTTGTATGGGATATGACTTATTATGAAAGCTTACAAGCTCTTGTGGCGAACACTAACACAACATTTTTACCAGTAGATATGCAAGGCGTTATGCTTGCTTTGTTCTGTGTTGTTGTGTTTGTTACATACACTATAAGATTCTTTACATGCAAGCAATCCTGGTTTTCTTTATTTGTAACAACTGTCTTTGTGGTGTTCAACATTGTTAAGTTGCTAGGCATGGTAGGTGAACCATGGACTGAAGATCACATCTTGTTATGTCTTGTAAACATGCTTACCATGTTGATAAGTCTTACTACAAAGGACTGGTTTGTTGTTTTTGTATCATACAAATTTGCTTATTATGTCGTTGTTTATGTAATGCAACCATCCTTTGTTCAAGACTTTGGGTTTATTAAGTGTGTAAGCGTGATTTACATGGCATGTGGTTATTTGTTTTGCTGTTATTATGGTATTCTTTACTGGGTTAACAGATTTACATGCATGACGTGTGGTGTTTACCAATTCACTGTCTCACCGGCAGAGCTCAAGTATATGACTGCTAACAATTTGTCAGCACCTAAGACCGCATATGATGCCATGATTCTTAGTGTTAAATTGATGGGTATAGGTGGAGAGAGAAATATAAAAATCTCCACTGTACAGTCTAAACTCACAGAGATGAAATGCACAAACGTTGTGCTGCTTGGGCTTTTGTCTAAAATGCATGTTGAATCTAACTCAAAGGAGTGGAATTATTGTGTTGGGCTGCATAATGAGATTAATTTGTGTGATGACCCCGAAGTGGTTCTTGAAAAACTACTTGCACTCATCGCATTCTTTTTATCCAAACACAATACATGTGATCTTAGTGACCTTATCGACTCCTATTTTGATAACACCACTATTTTACAGAGTGTGGCTTCTGCTTATGCTGCTTTACCTAGCTGGATTGCATATGAAAAAGCTCGCGCGGATTTAGAAGAGGCTAAGAAAAATGATGTTAGTCCACAATTATTGAAACAGCTTACAAAAGCATGCAATATTGCTAAGAGTGAGTTTGAACGCGAGTCCTCGGTTCAAAAGAAGCTTGATAAAATGGCCGAGCAAGCTGCAGCTAGTATGTACAAAGAGGCAAGGGCTGTTGACAGAAAATCAAAAATAGTTTCTGCTATGCATAGTCTTCTTTTTGGTATGCTCAAGAAACTTGATATGTCCAGTGTTAATACTATTATTGAACAGGCCCGTAATGGTGTGTTGCCCCTGAGTATCATACCTGCTGCAGCAGCCACAAGACTTATTGTTGTAACACCTAATATTGAAGTGCTTTCCAAAATTAGGCAAGAAAACAATGTCCACTATGCAGGTGCTATCTGGTCAATTATTGAAGTCAAGGATGCTAATGGTGCTCAAGTCCATTTAAAAGAAGTCACAGCTGCCAATGAGTTGAACCTGACCTGGCCTTTGAGTATTACATGTGAGAGAACCACAAAGTTGCAAAACAATGAAATTATGCCAGGTAAACTTAAAGAGAAGGCTGTTAAAGCGTCTGCTACAATTGATGGTGATGCTTATGGTAGTGGTAAGGCCCTCATGGCTTCTGAAAGTGGTAAGAGCTTTATATATGCATTTATAGCGTCTGACAGCAACCTTAAGTATGTTAAATGGGAGAGCAATAATGATGTAATACCCATTGAACTTGAGGCCCCATTGCGCTTTTATGTAGATGGTGCTAATGGCCCTGAAGTTAAGTATCTTTACTTTGTGAAGAACTTGAACACTCTTAGACGTGGTGCTGTTCTGGGTTATATTGGCGCTACTGTTCGTTTGCAGGCTGGTAAACCTACTGAACACCCATCTAACAGTGGTTTATTAACCTTGTGTGCTTTCGCTCCTGACCCTGCTAAGGCATACGTTGATGCTGTTAAGAGAGGTATGCAGCCAGTTACTAATTGTGTGAAAATGCTCTCAAATGGTGCTGGTAATGGTATGGCTATTACAAATGGTGTAGAGTCTAATACGCACCAAGACTCTTATGGTGGTGCATCTGTGTGCATCTATTGTAGGTGTCATGTAGAACATCCTGCAATTGATGGATTGTGTCGTTATAAGGGTAAATTTGTTCAAGTACCAACCGGCACTCAAGATCCTATTAGATTTTGTATTGAAAATGAAGTCTGTGTTGTTTGTGGTTGCTGGCTTAATAATGGTTGCATGTGTGATCGTACTTCTATGCAAGGCACAACTGTTGACCAGAGTTATTTAAACCGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCACGTTAGTAGAGCTTTTGACATCTATAATAAAGATGTTGCATGTATTGGTAAATTCCTTAAGACTAATTGTTCCCGTTTTAGGAATTTGGACAAACGTGATGCCTACTATGTTGTCAAGCGTTGTACTAAGAGCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCAGTTGCTGAACATGACTTCTTTTTGTATAAGGAAGGTCGATGTGAATTCGGCAACGTCGCACGTAAGGATCTTACAAAGTACACTATGATGGATCTATGTTATGCCATTAGGAATTTTGATGAAAAGAATTGCGAAGTTCTTAAAGAAATACTCGTGACATTAGGTGCCTGCAATGAATCCTTCTTTGAAAATAAAGATTGGTTTGACCCAGTGGAAAATGAAGCTATACATGAGGTGTACGCAAGACTTGGACCTATAGTAGCCAACGCTATGCTTAAATGTGTAGCGTTTTGTGATGCTATCGTGGAGAAAGGTTACATAGGTATTATTACACTTGATAACCAAGACCTTAATGGTAATTTTTACGACTTCGGTGATTTCGTAAAGACAGCGCCTGGTTTTGGATGTGCTTGCGTGACGTCATATTATTCTTATATGATGCCCTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAATTTTGTGAAAAGTGACATTTATGGTTCTGATTATAAGCAGTATGATTTGCTAGCTTATGATTTTACAGACCATAAAGAAAAGCTGTTCGAAAAATATTTCAAACACTGGGACCGCACATACCATCCTAACTGCTCTGATTGTACAAGTGATGATTGTATCATTCATTGTGCTAATTTTAACACATTGTTTTCAATGACCATACCCAACACTGCTTTTGGACCTCTTGTACGTAAAGTCCACATAGATGGTGTGCCAGTTGTTGTTACTGCTGGTTACCATTTTAAACAGTTGGGTATTGTGTGGAATCTTGATGTTAAATTAGACACTATGAAGTTGACTATGACAGATCTTCTTAGGTTCGTCACTGACCCTACATTACTTGTAGCATCAAGCCCTGCATTGTTAGATCAGCGCACTGTCTGTTTTTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTGAAACCAGGTCACTTTAACAAGGATTTCTACGATTTTATAACAGAGCGTGGATTCTTTGAGGAGGGATCTGAGTTGACGTTGAAACATTTCTTCTTTGCACAGGGTGGTGAAGCCGCTATGACAGATTTTAACTACTACCGTTATAACAGAGTTACTGTTTTAGACATCTGTCAGGCGCAATTTGTTTATAAAATTGTGTGTAAGTACTTTGATTGTTACGATGGTGGCTGCATCAATGCTCGAGAGGTTGTTGTTACCAACTACGACAAGAGTGCTGGTTATCCACTTAATAAATTTGGTAAGGCAAGACTTTACTATGAGACTCTGTCATATGAGGAGCAGGATGCGATTTTTGCATTAACAAAGAGAAATGTTCTACCCACAATGACACAAATGAATTTGAAATATGCTATATCTGGAAAGGCTAGAGCTCGCACTGTAGGAGGAGTGTCACTCCTTTCGACAATGACTACGAGACAATACCACCAGAAGCATTTAAAGTCTATTGCTGCTACACGTAATGCCACTGTTGTTATTGGAACGACTAAGTTCTACGGTGGCTGGGATAATATGTTAAAGAATTTGATGCGTGATGTAGATAACGGCTGTTTGATGGGATGGGACTATCCAAAGTGCGACCGTGCTTTGCCTAATATGATACGAATGGCTTCTGCAATGGTATTGGGTTCTAAGCACATTGGGTGTTGTACACATAGTGATAGGTTCTATCGCCTCTCTAACGAGTTAGCTCAAGTACTTACAGAGGTTGTGCATTGCACAGGTGGTTTTTATATCAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAATTCGGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGACTCAAACACCTGTAACAATGTTACAGTTAAGTCCATACAACGCAAGATATATGATAATTGTTATCGAAGTAGCAGTGTTGATGATGACTTCGTTGTTGAGTATTTTAGCTATTTAAGAAAGCACTTTTCTATGATGATTTTGTCAGATGATGGCGTGGTTTGTTACAACAAAGACTATGCTGATCTTGGTTATGTAGCAGACATTAGTGCTTTTAAAGCTACTTTGTATTACCAGAATAATGTTTTTATGTCTACAGCCAAGTGTTGGGTAGAACCAGACCTTAATGTTGGACCACACGAATTTTGTTCACAACACACACTACAAATTGTAGGAGCGGATGGTGATTATTATTTACCATACCCAGACCCTTCTAGAATCTTGTCAGCAGGTGTTTTCGTTGATGACATCGTTAAAACAGATAACGTCATTATGCTTGAACGTTATGTGTCTTTAGCAATCGATGCGTATCCACTTACAAAACACCCTAAACCCGCATATCAAAAAGTGTTTTATGCATTGTTAGATTGGGTTAAACATTTACAGAAGACTCTAAATGCTGGTATACTTGATTCATTTTCTGTTACTATGTTGGAGGATGGTCAAGATAAATTCTGGAGTGAAGAGTTCTATGCCAGTCTTTACGAAAAGTCTACTGTTTTGCAAGCTGCCGGTATGTGTATTGTTTGTGGTTCACAAACTGTGTTACGTTGCGGAGACTGTTTAAGGAGACCTCTTTTATGCACTAAGTGCGCTTACGACCATGTCATGGGTACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGCTATAATGGTTGTACTGTTAATGATGTAACAAAATTGTTTTTGGGAGGTCTTAACTATTATTGTACTGAACATAAACCACAATTGTCATTCCCGCTCTGTGCTAATGGCAATGTGTTTGGTCTGTACAAGAGTAGTGCAATTGGTTCTGAGGACGTTGACGATTTCAATAAACTTGCAATCTCGGACTGGACCAATGTAGAAGATTACAAACTTGCTAATAATGTCAAAGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCAAAGGAGGAGTCTGTTAAAGCTGAATATGCTTATGCCATATTAAAGGAGGTGGTCGGCCCTAAGGAAGTTGTACTCCAATGGGAATCCTCTAAGGTTAAACCTCCACTTAACAGAAATTCTGTTTTCACATGTTTTCAGCTAAACAAGGATACTAAAATTCAGTTAGGTGAATTTGTGTTTGAGCAGTCAGAGTATGGTAGTGAATCTGTTTACTACAAGAGTACTAGCACTACTAAGCTGACACCGGGTATGATTTTTGTGTTGACATCTCATAACGTGAGTCCACTTAAAGCTAATATCTTAGTCAACCAAGAGAAGTACAATACCATATCCAAGCTCTATCCTACGTTCAACATAGCGGAAGCCTATACCACATTGGTGCCTTACTATCAAATGATTGGTAAGCAAAAGTTTACAACTATCCAAGGTCCTCCTGGTAGTGGTAAATCACATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAAGCTAGGATCGTCTACACAGCATGTTCACATGCTGCTGTGGATGCATTGTGTGAAAAGGCTTCTAAGAACTTTAATGTGGATAAGTGTTCAAGGATAATACCCCAAAGAATCAGAGTTGACTGCTATATGGGTTTTAAACCTAATAATACTAATGCACAGTACTTGTTTTGTACAGTTAATGCTTTACCTGAAGCTAATTGCGACATCGTAGTTGTGGATGAAGTCTCAATGTGTACAAATTATGATCTCAGTGTTATAAATAGTAGACTGAGCTACAAGCACATTGTTTACGTGGGAGACCCACAACAGCTTCCAGCTCCTAGAACCTTGATTAATAAGGGTACACTCCAGCCTGAAGATTACAATGTTGTAACCCAGAGAATGTGTAAACTAGGACCTGATGTATTTTTGCATAAATGCTATAGATGCCCAGCTGAAATTGTTAAGACAGTCTCCGCGCTTGTTTATGAGAATAAGTTTTTGCCTGTCAACCCAGAGTCAAAGCAGTGCTTTAAAATGTTTGTAAAAGGTCAGGTGCAGATTGAATCCAACTCTTCTATAAACAATAAGCAACTAGATGTTGTTAAGGCATTCCTAGCACATAATCCAAAATGGCGTAAAGCCGTTTTTATCTCACCCTATAACAGTCAGAACTATGTCGCAAAACGTCTACTCGGTTTGCAAACACAAACGGTAGACTCTGCTCAAGGTAGTGAGTATGATTATGTCATTTACACACAGACTTCTGATACGCAGCATGCTATTAATGTCAACAGGTTTAATGTTGCCATTACTAGAGCAAAGGTTGGTATTCTCTGTATCATGTGTGATAGAAAGATGTATGACAATCTTGATTTCTATGAACTCAAAGATTCAAAAGTTGGCTTGCAAGCAAAACCTGAAACGTGTGGTTTGTTCAAAGATTGTTCAAAGACTGATCAATACATACCACCAGCATATGCTACAACATATATGAGTCTGTCTGAAAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAGGATGTTAAATATGCTAATGTTATCTCATATATGGGATTCAGGTTTGAGGCCAATGTACCAGGCTATCACACATTGTTTTGCACACGAGACTTTGCTATGCGTAATGTGAGATCATGGTTAGGGTTTGATGTCGAAGGTGCACATGTCTGTGGTGATAACATCGGAACTAATGTACCACTACAGCTGGGTTTTTCAAATGGTGTAGATTTTGTAGTACAAACTGAGGGATGTGTTGTTACTGAGAAAGGTAATAGTATTGAGGTTGTAAAGGCAAGAGCACCACCGGGTGAGCAATTTGCACATTTGATTCCACTTATGAGAAAAGGTCAGTCTTGGCACATTGTTAGACGTCGTATAGTGCAGATGGTTTGTGACTATTTCGACGGTTTATCTGACATCCTAATTTTCGTGCTTTGGGCTGGTGGTCTTGAGCTTACAACTATGAGATACTTTGTTAAAATTGGAAAACCACAGAAATGTGATTGCGGCAAAATTGCAACGTGTTATAACAGCTCGCAGTGTGTCTATGCTTGTTTTAAACATGCATTAGGATGTGATTACTTGTACAATCCTTACTGCATTGATATTCAACAATGGGGTTATACAGGATCCTTGAGCATGAACCATCATGAAGTTTGTAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGGTGCCTTGCTATATATGATTGTTTTGTCAAGCGTGTAGATTGGTCCATTGTGTACCCATTTATTGATAATGAAGAAAAGATCAATAAAGCTGGTCGCATTGTACAATCACATGTCATGAGAACTGCTCTTAAGGTTTTCAACCCTGCTGCAATTCACGATGTTGGTAATCCTAAAGGTATTCGTTGTGCTACAACATCTATACCATGGTTCTGTTATGACCGTGATCCTATTAATAACAATGTTAGATGTCTGGAGTATGATTACATGGTACATGGACAAATGAATGGTTTAATGTTATTTTGGAATTGCAACGTAGACATGTACCCGGAGTTCTCGATTGTTTGTAGATTTGATACTCGAACTCGCTCAAAATTGTCATTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCATTTCACACACCAGCTTATGATAGAAGAGCATTTGCTAAGCTTAAACCTATGCCATTCTTTTACTACGATGAGAGTGATTGTGAGTTTATTGATGGACAACCTAATTATGTACCACTTAAAGCTAATGTCTGCATAACTAAATGCAACATAGGTGGTGCAGTCTGTAAGAAACATGCAGCACTTTACAGAGCATATGTTGAAGACTACAACACTTTCATACAAGCTGGTTTTACAATTTGGTGCCCTCAAAATTTTGATACATATATGTTGTGGCAAGGTTTTGTTAATAGCAAAGCACTCCAGAGTTTGGAAAACGTAGCCTTCAATGTCGTCAAGAAAGGTGCCTACGCTGATTTAAAAGGTGACTTACCAACAGCAGTTATAGCTGATAAGATCATGGTGAGGGATGGACCTACTGACAAGTGTATTTTCACAAATAAAACTAGTTTGCCTACGAATGTGGCTTTTGAGCTGTATGCAAAACGCAAACTTGGACTCACACCTCCGTTAACAATACTTAGAAATCTAGGTGTTGTCGCAACACATAAATTCGTGTTGTGGGATTATGAAGCCGAATGTCCTTTCTCAAACTTTACTAAGCAAGTGTGTGCGTACACTGATCTTGATGGTGAAGTTGTAACATGTTTTGATAATAGTATTAGTGGTTCTTTTGAACGCTTTACTACTACGAAAGATGCAGTGCTTATTTCTAATAACGCTGTGAGGGGACTCAGTGCCATTAAATTACAATATGGCTTTTTGAATGATTTACCTGTAAGTACTGTAGGAAACAAACCTGTCACATGGTACATCTATGTGCGCAAGAACGGTGAGTACGTCGAACAGATTGACAGTTATTACACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGACTTTTTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACATGTTGTATTCGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCACAAGTGCGCCTAGCAAAAATGGGTTTGTTTTCTGTCCAAGAATTTATGAGTAATTCTGACAGTACACTGAAAAGTTGTTGTATAACATACGCTGACGATCCGTCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTAGACGATTTTGTGACTATCGTTAAGGGCTTAGATCTTAACGTTGTGTCGAAAGTTGTGGATGTTATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAACTCACAAATTAAAACCTTCTATCCACAACTCCAGTCTGCTGAGTGGAATCCTGGCTATAGCATGCCTACACTTTACAAAATACAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAGTTACCTGACGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATATCTCAATACCACTACACTGTGTGTTCCACATAAAATGCGTGTTCTGCATTTGGGAGCAGCAGGTGCTAATGGTGTTGCCCCTGGTACCACTGTATTAAGAAGATGGTTGCCAGACGATGCCATATTGGTTGATAATGATATGAGGGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGACTGTACTAATCTTTATATAGAGGACAAATTTGATTTACTTATCTCTGATTTATATGATGGCTCAACCAAGTCCATAGACGGTGAAAACATGTCGAAAGATGGCTTCTTTACATATATTAATGGTTTTATTAATGAGAAGCTAGCGCTTGGAGGTTCTGTAGCCATCAAAATCACTGAATTTAGCTGGAATAAAAGTTTATATGAATTAATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACCTCGTCATCGGAAGGCTTTCTGATAGGTATCAACTACTTAGGACCATACTGTGACAAGGCTATAGTGGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCCACAATTATGGCGTTGTCACACAACTCAGTCCTAGATACTCCAAAATTCAAGTGTCGTTGCAATAACGCACTTGTTGTTAATTTAAAAGAAAGAGAATTAAATGACATGGTTATTGGATTACTAAGGAAGGGTAAAATACTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAATCACTTTGTTAACACACCA >TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTTCTCAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACACGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTTGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCCATCAGAAATTTTGATGAAAGGAACTGTGAAGTTCTCAAAGAAATACTTGTGATAGTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAGGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATTCGATAGTTGAAAAAGGCTATATAGGTGTTATAACACTTGACAATCAAGACCTTAATGGTAATTTCTACGATTTCGGAGATTTCGTGAAGACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTCACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATCATTCATTGTGCCAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACCGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACATGATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCTAGCCCTGCACTCTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAGCACTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGATGGAGGGTGCATTAGTGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATATGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCACCAGAAGCATTTGAAGTCAATTGCTGCAACATGTAACGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTCTGATGGGATGGGACTATCCAAAGTGTGACCGTGCTCTACCTAACATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGATTCTATCGCCTCTCCAATGAGTTAGCACAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATTTTCCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTAGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAGCGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGACGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTCGTGTGCTACAACAAAGATTATGCTGACTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAATGTCTTCATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTACTACCTTCCCTATCCAGATCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGATGCATACCCGCTTACAAAACATCCTAAGCCTGCTTATCAAAAAGTTTTTTATACTCTATTAGATTGGGTTAAACATTTACAGAAAAACTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCTACTGTCTTGCAAGCTGCAGGTATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAGTGTGCTTATGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATTACGCCATATGTGTGTAGTTTTAGTGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTAGGTTCAGAGGCTGTTGAAGATTTTAACAAACTTGCAGTCTCTGACTGGACTAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAAGAGGTTATCGGCCCTAAAGAAATTGTACTCCAATGGGAGGCTTCTAAGACTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGTACGAGTACTTATAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCACAACGTGAGTCCCCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATACAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAGGCGAGAATAGTCTACACTGCATGTTCCCATGCTGCTGTAGACGCCTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGACTAATACCTCAAAGAATCAGAGTTGACTGTTATACTGGCTTTAAGCCGAATAACACTAATGCGCAGTACTTGTTTTGTACTGTCAATGCTCTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGCACTAATTATGATCTTAGTGTCATAAATAGCCGGTTGAGTTACAAACACATTGTCTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTCTGATTAATAAAGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCCGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAACAAGTTTGTACCTGTCAACCCAGAATCAAAGCAATGCTTTAAAATGTTTGTAAAAGGCCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAATAAGCAACTAGAGGTTGTCAGGGCCTTTTTAACACATAATCCAAAATGGCGCAAAGCTGTTTTCATCTCACCATATAATAGTCAAAATTATGTTGCTCGGCGCCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCACAGGGTAGTGAGTATGATTACGTCATTTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACCATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCTAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGTTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTATAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGTTATCATACACTATTCTGCACACGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTCGGCTTTGACGTTGAAGGCGCACATGTCTGTGGTGATAATGTTGGAACTAACGTACCATTACAACTTGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGGTGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAATCACGAGCACCACCGGGTGAGCAATTTGCACACTTGATCCCGCTTATGAGAAAGGGTCAACCTTGGCACATCGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTATTTTGTTAAAATTGGGAGACCACAAAAATGTGAGTGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCCGTCTATGCTTGCTTTAAGCATGCATTGGGATGTGATTATTTATACAACCCTTATTGCATAGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGCTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCCTTTATTGACAATGAAGATAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAACCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAATAATGTTAGATGCCTGGACTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGACACTCGCACTCGTTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTTTTCTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGTAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAACTTTTGACACTTATATGCTTTGGCATGGTTTTGTTAATAGCAGAGCACTTCAGAGTTTAGAAAATGTGGCTTTTAACGTCGTTAAGAAAGGTGCCTTCACTGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACTAATGTAGCTTTTGAGTTGTATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAACTTAGGTGTTGTCGCAACATATAATTTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCTTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAGTTACAATATGGCTTTTTGAATGATTTACCTGTAAGTACTATTGGGAATAAACCTGTCACATGGTATATGTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATTCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCGAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTAAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACATTCTATCCACAACTCCAATCTTCTGAATGGAATCCAGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGACGGCATTACCACTAATGTCGTTAAGTATACTCAGTTGTGTCAATATCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATATGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCTGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATACGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAGAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGATACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAACTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAATACACCA >K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTCTACTGTTGATCAAAGTTATTTAAACCGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAGTTCCTTAAGACAAACTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACTTACAAAGAAGGCAGATGTGAATTCGGCAACATCGCACGTAGGGATCTTACAAAGTACACAATGATGGATCTTTGTTATGCTATTAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCTTGCACTGAAGAATTCTTTGAAAACAAAGATTGGTTTGACCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGCGTTGCTTTTTGCGATGCCATAGTGGAAAAGGGCTATATAGGTATCATAACACTTGACAACCAAGATCTTAATGGCAACTTCTATGATTTTGGAGATTTCGTAAAAACTGTTCCTGGTTTTGGCTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGAAATTTATGGTTCTGACTATAAGCAGTATGATTTACTGGCTTATGATTTCACTGAACATAAAGAGTACCTTTTCCAGAAATACTTTAAGTACTGGGATCGCACGTATCACCCAAATTGTTCTGATTGTACTAGTGATGATTGTATCATTCATTGTGCTAATTTCAACACACTATTTTCTATGACAATACCAATGACTGCTTTCGGACCACTTGTCCGTAAAGTTCACATTGATGGTGTGCCAGTTGTTGTTACTGCAGGTTACCACTTTAAACAACTTGGTATTGTATGGAATCTTGATGTGAAATTGGACACAATGAAGTTGACTATGACAGATCTGCTTAGATTTGTCACAGATCCTACACTTCTTGTAGCATCAAGCCCTGCATTGTTAGATCAACGCACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTAAAGCCAGGTCACTTTAACAAAGATTTCTACGATTTTATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAATTAACATTAAAACACTTTTTCTTTGCACAGGGCGGTGAAGCTGCTATGACAGACTTCAATTACTATCGCTACAATAGAGTCACAGTACTAGACATTTGCCAAGCTCAGTTTGTTTACAAAATAGTTGGCAAATATTTTGAATGCTATGATGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTATGAAACTCTGTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTCTACCCACAATGACTCAGATGAATTTGAAATATGCTATTTCTGGAAAGGCTAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCACCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCCACTGTGGTTATTGGCTCAACCAAGTTTTATGGTGGTTGGGATAACATGCTTAAAAATTTAATGCGTGATGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGCGCTTTACCTAATATGATCAGAATGGCATCTGCCATGATATTAGGTTCTAAGCATCTTGGTTGTTGTACACATAGTGATAGATTCTATCGCCTCTCCAATGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACGGGTGGTTTTTACTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCTTATGCTAACTCAGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTCGATTCAAACGCTTGTAACAATGTTACAGTAAAATCCATACAACGTAAAATCTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAATACTTCAGTTATTTGAGAAAACACTTTTCTATGATGATTCTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCAGATCTAGGTTATGTAGCTGATATCAATGCTTTTAAAGCAACGCTCTATTATCAGAATAATGTCTTTATGTTCACTTCTAAGTGTTGGGTAGAACCAGATCTTAATGTTGGACCACATGAATTTTGTTCACAGCACACATTGCAAATTGTTGGACCTGATGGAGACTATTACCTTCCCTATCCAGACCCATCTAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGATAATGTTATTATGTTAGAACGTTATGTGTCATTGGCTATTGATGCATACCCACTCACAAAACATCCTAAGCCTGCTTATCAAAAAGTATTTTACACCCTGCTTGATTGGGTTAAACATTTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCCTTCTCAGTTACAATGCTAGAAGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTATGCTAGCCTCTATGAAAAGTCTACTGTTTTGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTTATTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTATAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCCGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCCATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATATTTGTGACAGTAGGTGCCTGTACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAACGAGGCTATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTTGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGTAATTTCTACGATTTCGGGGATTTCGTGAAGACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGTATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTCACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGATTGTATCATTCATTGTGCCAATTTTAACACATTGTTTTCTATGACAGTACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTGGACACGATGAAGTTGAGTATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCGGCACTTTTAGATCAGCGTACTGTCTGTTTCTCCATCGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCATTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAATATTGAAACATTTTTTCTTTGCACAGGGTGGTGGAGCTGCTATGACAGACTTCAATTATTACCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCCCAATTTGTCTACAAAATAGTTGGCAAATATTTTGAATGTTATGACGGTGGGTGTATTAGTGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAGGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCAACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTCTCACTTCTTTCTACCATGACTACGAGGCAATACCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAACGCTACTGTTGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTCTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACGCATAATGATAGGTTCTATCGCCTCTCCAATGAGTTAGCGCAAGTGCTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGATTCAAACGCTTGTAACAATGTTACAGTAAAATCTATACAACGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAATAAAGATTATGCTGATTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAATGTTTTTATGTCCACATCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAGTTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTACTACCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGATGCATACCCACTTACAAAACATCCTAAGCCTGCTTATCAAAAAGTGTTTTATACTCTACTAGATTGGGTTAAACATTTACAGAAAAACTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGATTTTTACGCTAGCCTCTATGAAAAATCTACTGTCCTGCAAGCTGCAGGTATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGCCTTAGGAGACCACTTTTATGCACGAAGTGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATTGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGCAGTGCGGTAGGTTCAGAGGCTGTTGAAGATTTTAATAAACTTGCAGTCTCTGACTGGACTAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAATAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGTACGAGTACTTATAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCACAATGTGAGTCCCCTCAAAGCCTCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAACACACTTGTACCTTACTACCAAATTATAGGTAAGCAAAAATTTACAACTATACAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCACAGGCGAGAATAGTCTACACTGCGTGTTCTCATGCTGCTGTAGACGCCTTATGTGAAAAAGCAGCCAAAAACTTCAATGCTGATAGATGTTCAAGGATAATACCTCAAAGAGTCAGAGTTGACTGTTATACTGGCTTTAAGCCTAATAACACCAATGCGCAGTACTTATTTTGTACTGTCAATGCTCTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGTACTAATTATGATCTTAGTGTCATAAATAGCCGACTGAGTTACAAACACATTGTGTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCACAGGATTACAATGTTGTAACCAAAAGAATGTGTACACTAGGACCTGATGTCTTTTTGCATAAATGTTATAGGTGTCCAGCCGAGATTGTTAAGACGGTCTCTGCACTTGTTTATGAAAATAAGTTTGTACCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAAGTTCAGATTGAGTCTAACTCTTCTATAAACAATAAGCAATTAGAGGTTGTTAAGGCTTTTTTAACACATAATCCAAAATGGCGTAAGGCTGTTTTCATCTCGCCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTTGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATTTATACACAGACCTCCGACACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAAAACCATTTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCTAAACCTGAAACTTGTGGTTTGTTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGTTTATCTGATAATTTTAAGACAAGTGGTGGTTTAGCTGTTAACATTGGCACAAAAGATGTTAAATATGCTAACGTCATCTCATATATGGGATTTAGGTTTGAAGCCAACATACCAGGTTATCATACACTGTTCTGCACGCGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGGTTTGACGTTGAAGGCGTACATGTCTGTGGTGATAATGTTGGAACTAACGTACCATTACAGCTTGGTTTTTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGGTGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCTCGTGCACCACCAGGTGAGCAATTTGCACACTTGATTCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTGGAACTTACAACTATGAGGTACTTTGTTAAAATTGGAAGACCACAAAAATGTGAGTGCGGCAAAAGTGCAACTTGTTATAGTAGCGCTCAATCTGTTTATGCTTGTTTTAAGCACGCATTAGGATGTGATTATTTATATAACCCTTATTGCATTGATATACAGCAGTGGGGCTACACAGGATCTTTGAGCATTAATCATCATGATGTTTGCAACATTCATAGAAATGAGCATGTGGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTTTACCCTTTTATTGACAATGAAGACAAGATTAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAACCCTACTGCAATTCACGATGTTGGTAATCCAAAAGGCATTCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAATAATGTTAGATGTTTGGACTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAATTGCAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGATACTCGCACTCGTTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCTTTGTATGTTAACAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTCTACTATGATGATAGTAATTGTGAACTTGTTGACGGACAGCCTAATTATGTACCACTTAAGTCGAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAAAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAACCTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAGAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAACGTAGTTAAGAAAGGTGCCTTCACTGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGATAAAATAATGGTAAGAGATGGACCTACCGACAGATGTATTTTTACAAATAAGACTAGCTTGCCTACTAATGTAGCTTTTGAGTTGTATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAACTTAGGTGTTGTCGCAACATATAATTTTGTGTTGTGGGATTATGAAGCCGAATGTCCTTTCTCGAATTTCACTAAGCAAGTTTGTTCTTATACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGTTGTTAAAGGGCTTAGTGCCATTAAGTTACAATATGGCTTTTTGAATGATCTACCTGTAAGTACTGTTGGAAATAAACTTGTCACATGGTATATATATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCACAAGTGCGCCTTGCGAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGTTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGGTGGATGTTGTGGTGTGAGAATTCACATATTAAAACCTTCTATCCACAACTCCAATCTTCTGAATGGAATCCAGGCTATAGCATGCCGACACTGTACAAAATTCAGCGTATGTGTCTCGAACGGTGTAACCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACCACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAATTTGATTTGCTCGTCTCTGATTTATACGATGGCTCCACAAAATCAATTGACGGTGAAAATACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAGAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAGTCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGTTTTCTGATTGGTATTAGCTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGATACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAACTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAATACAACA >27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ATGAGTTCCAAACAATTTAAGATCCTCGTTAATGAGGACTACCAAGTCAACGTGCCTAGTCTTCCTTTCCGTAACGCTTTGCAGGAAATTAAGTACTGCTACCGTAACGGTTTTGAGGGCTATGTTTTCGTACCTGAATACCGTCGTGACCTAGTTGATTGCGATCGTAAGGATCACTACGTCATTGGTGTTCTGGGTAACGGAATAAGTGATCTTAAACCTGTTCTCCTTACCGAACCTTCCGTCATGTTGCAAGGCTTTATTGTTAGAGCTGGCTGCAATGGCGTTCTTGAGGACTTTGACCTTAAAATCGCCCGTACTGGAAATGGCGCCATATATGTAGATCAATACATGTGTGGTGCGGATGGAAAACCAGTTATTGAAGGTGAGTTTAAGGATTATTTCGGTGATGAGGACGTTATCATCTATGAAGGAGAGGAGTACCATTGTGCCTGGCTAACAGTGCGCGATGAAAAACCTTTATGTCAACAAAATCTCCTCACAATTAGGGAAATCCAATACAATCTGGACATCCCACATAAGTTGCCTAATTGTGCTATCAGAGAGGTAGCACCACCAGTCAAGAAGAATTCCAAGGTTGTTCTTTCTGAAGAGTATAAAAAGCTCTATGACATCTTTGGTTCACCATTTATGGGCAATGGGGACAGTCTTAACAAGTGTTTTGACAGCCTCCACTTCATTGCTGCCACTCTTAAGTGTCCTTGTGGCGCCGAGAGTAGTGGTGTTGGTGATTGGACTGGTTTTAAGACTGCTTGTTGTGGTCTTCAAGGCAAAGTTAAAGGCGTCACATTAGGTGCTGTTAAACCAGGTGATGCCGTTGTCACTAGCATGAGTGCAGGTAAGGGTGTAAAATTCTTTGCTAATAGTGTACTCCAATATGCTGGTGATGTGGAAAATGTCTCTGTTTGGAAAGTGATTAAAACTTTCACTGTTAATGAGACTGTCTGCACCGCTGATTTTGAAGGCGAATTGAACGACTTCATTAAACCAGAGAGTACTTCACCTGTTTCATGTTCTATTAAGAGAGCGTTCATTACTGGTGAGGTTGATGATGCAGTCCATGACTGTATTATCTCAGGAAAGTTGGACCTTAGTACTAACCTTTTTGGTGGTGCTAACCTGCTTTTCAAGAAAACGCCCTGGTTTGTGTTAAAGTGTGGTGCTATTTTTGCTGATGCTTGGAAAGTTGTTGAAGAACTGCTTTGTTCTCTCAAACTTACATACAAGCAAATCTATGATGTAGTAGCATCACTTTGCACTTCTGCCTTTACTATTATGGATTACAAACCTGTATTTGTAGTTGCATCTAATAGTGTTAAGGATCTCGTTGACAAGTGTGTCAAAATTCTTGTGAAAGCCTTTGATGTTTTCACACAGACAATTACCATTGCGGGTGTGGAGGCTAAGTGCTTTGTGCTTGGCTCTAAATACTTGCTTTTTAATAATGCACTTGTTAAGCTTGTCAGCGTTAAAATACTTGGCAAGAGGCAGAAAGGTCTTGATAGTGCATTCTTTGCCACTAATTTGATTGGTGCTACTGTTAAGGTGACACCACAAAGAACTGAGGCAGCCAATATTAGTTTGAATAAAGTAGATGATGTTGTCACACCTGGTGAAGGTCATGTTGTCATTGTAGGCGACATGGCTTTTTACAAGAGTGGAGAGTACTACTTTATGATGGCAAGTCCTGATTCAGTTCTCATTAATAACGTCTTTAAAGCAGCTCGAGTGCCATCTTATAACATTGTTTACAATGTGGATGATGATACCAAGAGTAAGATGTCATCTAAAATTGGAACGCCATTTGAATTTGATGGTGATGTGGATGCTGCTATTGTTAAGATTAACGACTTACTTGTTGAGTTTAGACAAGAAAAGTTTTGTTTCAGAGCACTTAAGGATGGTGAAAGTATCTTGGTTGAGGCATACCTTAAGAAATATAAAATGCCAATTTGTCTCAAAAATCATGTTGGTTTATGGGACATCATAAGACGCGATTCTGATAAGAAGGGTTTTCTTGACACTTTCAGTCATCTTAATGAATTGGAGGATGTCAAGGATGTAAAAATTCAGTCTATTAAAAATATCCTTTGCCCTGACCTTCTGTTAGAATTAGATTTTGGTGCAATTTGGTATAGATGTATGCCAGCCTGCTCTGATGTGTCTATTTTGGGTAATGTTAAAATCATGCTAGGTAATGGTGTTAAAGTGATTTGTGATGGCTGCCATGGTTTTGCTAACCGTTTAACGGTTAATTACAGCAAACTGTGTGACACAGCTCGTAAAGACATTGAAATTGGTGGTATACCATTTTCCACCTTTAAAACACCATCTAGCAGCTTCATTGACATGAAAGATGCCATCTATTCTGTGGTTGAATACGGTGAAGCATTTTCCTTTAAGACTGCAAGTGTACCTGTAACTAATAGTGGTACTGTCAAAAATGACGACTGGTCAGACCCCATTTTGTTAGAACCTGCAGATTATGTCGAACCTAAAGATAACGGTGATGTAATTGTCATTGCTGGATACACCTTTTACAGGGATGAGAACGATCACTTTTATCCATATGGTTCCGGCATGGTTGTGCAGAAGATGTACAACAAGATGGGTGGTGGTGACAAGTCAGTTTCATTTTCAGACAACGTTAATGTTAAAGAGATAGAACCTATTACACGTGTCATGCTAGAATTTGAATTTGACAATGAGGTGGTAACACAGGTTCTTGAAAAAGTCATTGGTGCCAAATATAAGTTTACAGGTACCACTTGGGAAGAATTTGAAGATTCTATTTCTGAGAAACTTGACAAGGTTTTCGACACGCTTGCTGAACAGGGTGTAGAACTTGAAGGTTACTTCATTTATGACACTTGTGGCGGATTTGACATTAATAATCCAGATGGTGTTATGATTTCACAGTATGATCTTAACTCAGCTGTTGATGTCAAAAGTGATTCTGATGCAAGCGTGGAAGACACATCTTCGATTTCTGATAACGAAGATGTTGAACAAATAGAAAAAGAGAACGTCTCAGCTGCTGATGTTACAGTTGTAGATGTTGAAGAATTTGTTGAGCAAGTTTCTCTTGTTGACACCGAAGAACAACTCCCCTCAGTAGAGGAAAAAGTTGAAGGCTCTGCTAAAGATGACCCGTGGGCTGCTGCTGTTGATGAACAGGAAGCTGAACAACCTAAACCTTCCTTAACTCCATTTAAGACAACAAATCTTAATGGTAGAATTATTCTTAAACAACAAGATAACAATTGTTGGATAAACGCTTGCTGTTACCAGTTGCAAGCTTTTGACTTTTTCAACCATGAATTATGGGATGGTTTTAAGAAAGATGACGTTATGCCTTTCGTAAACTTCTGTTATGCAGCTCTAACTTTGAAGCAGGGTGATTCAGGAGACTCAGAATACCTTTTGGAGACGATGCTCAATGATTATAGTACAGCTAAAGTTGTTCTTAGTGCTAAGTGTGGCTGTGGTGTTAAAGAAATAGTTTTAGAGCGAACTGTGTTTAAGCTCACACCTCTTAAGAATGAGTTTAAATATGGTGTCTGTGGTGACTGTAAACAAATTAACATGTGTAAGTTTGCAAGCGTGGAAGGTTCAGGTGTTTTTGTTCATGATAGA---ATTGAAAAACGAACACCTGTGTCACAATTCATTGTGACACCTATTATGCACGCAGTTTACACAGGTACAACACAGAGTGGTCATTACATGATTGAGGATTGCACTCATGATTATTGTGTGGATGGTATGGGAGTTAAACCCCGTAAACAAAAGTTTTACACATCCACCTTGTTTCTTAATGCAAATGTAATGACA---------------------------------------GCTGACTCTAAAACTACAATCGAACCAACTGCACCTGTTAAGGATAAGCTTGTAGAAGAATGTCAAAGTCCTAAAGACTTTATATTACCCTTTTACACAGCGGGGAAAGTGTCATTTTACCAAGGAGATTTGGATGTTTTGATTAACCTTCTTGAACCTGACGTTGTTGTTAACGCTGCTAATGGTGATCTTAGGCACATGGGTGGTGTTGCTAAAGCCATTGATGTGTTCACAGGTGGTAAGTTGACGAAACGTTCTAAAGAATATCTTAGGACTAATAAAACAATAGCTCCTGGTAATGCTGTGCTTTTTGAAAACGTACTTGAGCATCTTAGTGTATTGAATGCTGTCGGACCACGTAATGGTGACAGTAGAGTTGAAGGTAAACTCTGTAACGTTTACAAAGCAATTGCCAAGTGTGACGGTAAGATATTAACACCACTTATTAGTGTTGGTATCTTCAAAGTCAAACTGGAAGTTTCATTGCAGTGTCTACTTAAAACTGTCACAGATAGGGAATTAAATGTCTTTGTTTACACTGACCAAGAGAGAATTACCATAGAAAATTTCTTCAATGGTACTATTCCTGTCAAGGTAACGGAAGACACTGTGAATCAAAAGCGTGTGTCTGTGGCACTTGATAAAACTTATGGTGAGCAACTCAAAGGCACTGTTGTTATTAAAGACAAAGATGTTACTAACCAGTTGCCAAGTGTGTCAGATGTTGGTGAAAAAGTCGTTAAGGCATTGGATGTTGATTGGAATGCTTACTATGGCTTTTCAAATGCAGCGGCTTTTAGTGCCAGTTCCCATGATGCTTATATATTTGAAGTTGTAACACACAACAACTTCATTGTTCATAAGCAGACTGATAATAATTGTTGGGTTAATGCAATTTGTTTAGCATTACAAAGGCTTAAACCAACATGGAAGTTTCCTGGTGTTAAAAGTTTGTGGGATGATTTTCTTGTTCGTAAAACTGCTGGATTTGTCCACATGCTATACCACATTTCAGGCTTAAAGAAAGGACAACCTGGTGATGCTGAGTTGACTTTACATAAGCTTGGTGAGTTGATGTTGAGTGATAGTGCTGTCACCATCACACATACAACTGCATGTGACAAGTGTGCAAAAACTGAAACTTTTACAGGCCCTGTGATAGCAGCACCTCTTCTGATCCATGGCACTGATGAAACCTGTGTTCATGGTGTAAGTGTTAATGTTAAAGTGACAAGTGTTAGAGGCACTGTGGCTATCACTTCCTTAATCGGTCCTGTTGTAGGAGATGTTATTGATGCAACTGGTTATATTTGTTATACTGGATTGAACTCACGTGGTCATTATACCTATTATGATAATCTTAATAGTTTAATGGTTGATGCTGAAAAGGCCTATCATTTTGAGAAAAACCTCTTACAGGTTACAACAGCCATTGCTAGTAATTTTATTGCCTACACACCTAAGAGTGAGATCTATCCTAAGGTTCAACCAGTTAAAGAATCACATACAGCTCGTGTTTTTAGTGAGGTTGAAGAAATTCCTAAAAATGTAGTTCGTGAAACAAAATTGCTAGCTATTGAGAGTGGTGCAGATTACACACTCTCAACACTTGGTAAATATGCTGATGTTTTCTTTATGACCGGTGATAAAATTCTTAGGTTTCTCCTTGAAGTCTTTAAATATTTATTGGTTGTTTTTATGTGTCTTAGAAAATCTAAGATGCCTAAAGTTAAGGTAAAACCACCGCATGTATTCAAAAACTTAGGTGCTAAAGTTAGGACATTGAATTACGTAAGACAATTGAACAAACCAGCGTTATGGCGTTACGTAAAACTAGTGTTACTTTTAATAGCATTGTACCACTTTTTCTACTTGTTTGTTAGTATACCAGTAATGCACAAATTAGTGTGTAGTAGTAGTGTACAAGCGTATAGTAATTCTAGTTTTGTGAAATCAGAAGTTTGTGGTAATTCTATTCTATGCAAGGCGTGTCTGGCATCTTATGATGAATTGGCTGATTTTGATCATCTTCAGGTGTCATGGGATTATAAGTCGGATCCGCTATGGAATAGAGTTATACAATTGTCTTACTTCACATTCTTGGTTGTTTTTGGCAATAATTATGTTAGATGTCTTCTTATGTATTTTATCTCTCAGTACCTTAACTTGTGGTTGTCTTATTTTGGTTATGTTAAGTATAGTTGGTTTTTGCATGTCATCAACTTTGAATCAATTTCTGTTGAATTTGTGATCATAGTTGTAGTTTTTAAGGCAGTTCTCGCACTTAAACACATCTTCTTTTCATGCAATAACCCATCATGTAAGACTTGTTCTAAGATTGCTAGGCAGACACGTATTCCTATACAAGTTGTGGTTAATGGTTCAATGAAGACTGTGTATGTCCACGCTAATGGTACTGGTAAACTCTGCAAAAAGCATAATTTCTACTGTAAAAATTGTGACTCTTACGGTTTTGACCACACATTCATCTGTGACGAGATTGTGCGTGACCTGGGTAACAGTATCAAGCAAACTGTTTATGCCACTGATAGATCATACCAGGAAGTCACAAAGGTTGAATGCTCTGGTGGCTTTTACAGGTTTTATGTTGGTGATGAATTCACGGCATACGACTATGATGTAAAAAACAAGAAGTATAGTAGCCAGGAAGTGCTTAAAACTATGTTCCTGCTTGATGACTTCATCGTCTATAGTCCATCAGGGTCTTCCCTCGCTAGTGTTAGAAATGTCTGTGTTTATTTTTCACAACTGATTGGTAGGCCTATTAAAATTGTTAATAGTGAACTTCTTGAGGATTTATCTGTAGACTTTAAGGGAGCACTTTTTAATGCTAAGAAAAATGTTATTAAAAACTCTTTTAATGTTGATGTGTCAGAATGTAAAAACCTTGAAGAGTGTTATAAAGCATGCAACCTTGATGTGACATTTTCTACTTTTGAAATGGCTGTTAATAACGCTCATAGATTTGGTATATTGATTACAGACCGCTCCTTTAACAATTTTTGGCCATCAAAAATTAAGCCAGGTTCTTCTGGTGTCTCTGCTATGGACATTGGTAAGTGCATGACTTTTGATGCAAAGATTGTTAATGCAAAGGTTTTAACGCAACGAGGTAAAAGTGTTGTATGGCTTAGTCAGGACTTTTCTACTCTTAGTTCTACAGCACAGAAAGTTTTAGTTAAAACTTTTGTAGAAGAAGGTGTGAACTTTTCACTAACGTTTAATGCTGTGGGTTCAGATGAAGACCTCCCCTATGAGAGATTCACTGAATCAGTTTCACCAAAGAAAGGTTCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAGATCTTCTGGTGTTTGGTTTTGTTTATTACCTTGTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGATGGTTATGAATACATGGTTATTAAGAATGGCATTGTTCAACCATTTGATGATTCTATTAACTGTGTACATAACACATACAAAGGCTTTGTTATGTGGTTTAAAGCTAAATATGGTTTTGTACCTACATTCGACAAGTCTTGTCCTATTGTTTTAGGAACTGTTTTTGACTTAGGCAATATGAGACCAATCCCTGATGTGCCAGCTTATGTAGCACTTGTTGGTAGATCCCTAGTGTTTGCGATTAATGCAGCATTTGGTGTTACTAATGTTTGTTATGATCATACAGGTTCTGCTGTGAGTAAAAACTCTTATTTTGATACCTGTGTATTTAATGCTGCTTGCACCACTCTATCAGGCCTTGGAGGTACAATTGTTTATTGTGCCAAACAAGGACTTGTGGATGGTGCTAAACTTTATAGCGAATTGATGCCTGACTATTTTTATGAGCACGCTAGTGGTAACATGGTTAAAATACCAGCCATTATTAGGGGTTTTGGTCTGAGATTCGTAAAAACACAGGCTACAACTTATTGCAGAGTAGGGGAGTGTGTTGAAAGTCAGGCCGGTTTTTGCTTTGGTGGTGACAACTGGTTTGTTTATGATAAAGAGTTTGGTGATGGTTATATTTGTGGAAGCTCTACATTGGGTTTTCTCAAAAATGTCTTTGCTCTCTTTAACTCTAACATGTCTGTAGTAGCCACATCCGGTGCTATGTTGGTTAACATTATCATCGCATGTTTGGCTATAGCGGTCTGTTATGGTGTTCTTAAATTTAAGAAAATCTTTGGTGATTGTACTCTCCTAGTTGTTATGATTATTGTTACATTGGTTGTTAACAATGTTTCTTATTTTGTGACCCAAAACACATTCTTTATGATTGTTTATGCCATTATTTATTACTTTACAACAAGGAAATTATCATACCCTGGTATCTTGGATGCAGGATTCATTATTGCCTATGTGAACATGGCCCCATGGTATGTGCTTGTGCTGTACATAGTGGTCTTCTTATATGATTCTCTACCCTCACTATTCAAACTTAAGGTTACAACAAACCTTTTTGAAGGGGATAAATTTGTTGGTAGTTTTGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAGACACTTGTTAATTCTACATCCTTGGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTACAAGTACTATACTGGTTCAATGGGAGAGGCCGATTACCGCATGGCTTGTTATGCTCATTTAGGTAAGGCATTAATGGATTATTCAGTCTCAAGAAATGATGTTCTTTACACACCACCAACGGTCAGTGTTAATTCAACATTACAGTCAGGACTGAGAAAAATGGCACAGCCTAGTGGTATTGTGGAACCCTGCATTGTGAGGGTAGCCTATGGCAATAATGTGCTTAATGGTTTGTGGCTTGGAGATGAAGTTATCTGCCCTAGACACGTCATTGCAAGTGACACATCACGTGTGATCAATTATGACAATGAGTTGTCCGGTGTGCGGTTACATAACTTCTCTATAGCCAAAAATAATGTGTTTTTGGGCGTTGTGTCTGCCAAGTATAAGGGTGTGAACCTTGTGCTTAAGGTTAATCAGGTAAACCCCAACACACCAGAACACAAATTCAAATCCGTGAAGTCTGGTGAGAGTTTTAACATTCTCGCTTGTTATGAAGGCTGTCCCGGTAGTGTCTACGGTGTGAACATGAGAAGTCAGGGTACCATCAAAGGTTCATTTATTGCTGGTACCTGTGGGTCAGTAGGTTATGTATTAGAAAATGGAATACTCTATTTTGTGTACATGCACCACTTAGAATTAGGTAATGGCTCTCATGTTGGTTCAAACCTTGAGGGGGTAATGTATGGCGGTTATGAAGATCAACCTAGCATGCAATTGGAGGGTACTAACGTCATGTCATCAGATAATGTAGTTGCATTTTTGTATGCTGCTCTTATTAATGGTGAAAGATGGTTTGTTACAAATGCATCAATGACGTTAGAATCTTACAATGTATGGGCCAAAACTAACAGTTTTACGGAACTTGTTTCAACTGATGCTTTTAATATGTTGGCTGCAAAAACTGGTTATAGTGTTGAGAAGTTGCTTGAATGTATTGTTAGACTCAACAAAGGTTTTGGAGGACGCACTATACTCTCTTATGGTTCATTGTGTGATGAATTCACACCTACGGAAGTTATAAGGCAAATGTATGGTGTTAATCTTCAGAGTGGTAAAGTGAAATCTCTCTTTTACCCTGTGTTGACAGCCATGGCTATTCTATTTGCTTTTTGGTTAGAGTTCTTTATGTACACACCCTTTACATGGATTAATCCATCGTTTATCAGTGTTATTCTAGCTATTACAACTTTTTTCTCTGTGTTATTAGTTGTTGGGATTAAACACAAAATGTTATTCTTTATGTCTTTTGTAATGCCTAGTGTTGTGTTGGCCACCGTTCATAATGTTGTATGGGATATGACTTATTATGAAAGCTTACAAGCTCTTGTGGCGAACACTAACACAACATTTTTACCAGTAGATATGCAAGGCGTTATGCTTGCTTTGTTCTGTGTTGTTGTGTTTGTTACATACACTATAAGATTCTTTACATGCAAGCAATCCTGGTTTTCTTTATTTGTAACAACTGTCTTTGTGGTGTTCAACATTGTTAAGTTGCTAGGCATGGTAGGTGAACCATGGACTGAAGATCACATCTTGTTATGTCTTGTAAACATGCTTACCATGTTGATAAGTCTTACTACAAAGGACTGGTTTGTTGTTTTTGTATCATACAAATTTGCTTATTATGTCGTTGTTTATGTAATGCAACCATCCTTTGTTCAAGACTTTGGGTTTATTAAGTGTGTAAGCGTGATTTACATGGCATGTGGTTATTTGTTTTGCTGTTATTATGGTATTCTTTACTGGGTTAACAGATTTACATGCATGACGTGTGGTGTTTACCAATTCACTGTCTCACCGGCAGAGCTCAAGTATATGACTGCTAACAATTTGTCAGCACCTAAGACCGCATATGATGCCATGATTCTTAGTGTTAAATTGATGGGTATAGGTGGTGAGAGAAATATAAAAATCTCCACTGTACAGTCTAAACTCACAGAGATGAAATGCACAAACGTTGTGCTGCTTGGGCTTTTGTCTAAAATGCATGTTGAATCTAACTCAAAGGAGTGGAATTATTGTGTTGGGCTGCATAATGAGATTAATTTGTGTGATGACCCCGAAGTGGTTCTTGAAAAACTACTTGCACTCATCGCATTCTTTTTATCCAAACACAATACATGTGATCTTAGTGACCTTATCGACTCCTATTTTGATAACACCACTATTTTACAGAGTGTGGCTTCTGCTTATGCTGCTTTACCTAGCTGGATTGCATATGAAAAAGCTCGCGCGGATTTAGAAGAGGCTAAGAAAAATGATGTTAGTCCACAATTATTGAAACAGCTTACAAAAGCATGCAATATTGCTAAGAGCGAGTTTGAACGCGAGTCCTCGGTTCAAAAGAAGCTTGATAAAATGGCCGAGCAAGCTGCAGCTAGTATGTACAAAGAGGCAAGGGCTGTTGACAGAAAATCAAAAATAGTTTCTGCTATGCATAGTCTTCTTTTTGGTATGCTCAAGAAACTTGATATGTCCAGTGTTAATACTATTATTGAACAGGCCCGTAATGGTGTGTTGCCCCTGAGTATCATACCTGCTGCAGCAGCCACAAGACTTATTGTTGTAACACCTAATATTGAAGTGCTTTCCAAAATTAGGCAAGAAAACAATGTCCACTATGCAGGTGCTATCTGGTCAATTATTGAAGTCAAGGATGCTAATGGTGCTCAAGTCCATTTAAAAGAAGTCACAGCTGCCAATGAGTTGAACCTGACCTGGCCTTTGAGTATTACATGTGAGAGAACCACAAAGTTGCAAAACAATGAAATTATGCCAGGTAAACTTAAAGAGAAGGCTGTTAAAGCGTCTGCTACAATTGATGGTGATGCTTATGGTAGTGGTAAGGCCCTCATGGCTTCTGAAAGTGGTAAGAGCTTTATATATGCATTTATAGCGTCTGACAGCAACCTTAAGTATGTTAAATGGGAGAGCAATAATGATGTAATACCCATTGAACTTGAGGCCCCATTGCGCTTTTATGTAGATGGTGCTAATGGCCCTGAAGTTAAGTATCTTTACTTTGTGAAGAACTTGAACACTCTTAGACGTGGTGCTGTTCTGGGTTATATTGGCGCTACTGTTCGTTTGCAGGCTGGTAAACCTACTGAACACCCATCTAACAGTGGTTTATTAACCTTGTGTGCTTTCGCTCCTGACCCTGCTAAGGCATACGTTGATGCTGTTAAGAGAGGTATGCAGCCAGTTACTAATTGTGTGAAAATGCTCTCAAATGGTGCTGGTAATGGTATGGCTATTACAAATGGTGTAGAGTCTAATACGCACCAAGACTCTTATGGTGGTGCATCTGTGTGCATCTATTGTAGGTGTCATGTAGAACATCCTGCAATTGATGGATTGTGTCGTTATAAGGGTAAATTTGTTCAAGTACCAACCGGCACTCAAGATCCTATTAGATTTTGTATTGAAAATGAAGTCTGTGTTGTTTGTGGTTGCTGGCTTAATAATGGTTGCATGTGTGATCGTACTTCTATGCAAGGCACAACTGTTGACCAGAGTTATTTAAACCGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCACGTTAGTAGAGCTTTTGACATCTATAATAAAGATGTTGCATGTATTGGTAAATTCCTTAAGACTAATTGTTCCCGTTTTAGGAATTTGGACAAACGTGATGCCTACTATGTTGTCAAGCGTTGTACTAAGAGCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCAGTTGCTGAACATGACTTCTTTTTGTATAAGGAAGGTCGATGTGAATTCGGCAACGTCGCACGTAAGGATCTTACAAAGTACACTATGATGGATCTATGTTATGCCATTAGGAATTTTGATGAAAAGAATTGCGAAGTTCTTAAAGAAATACTCGTGACATTAGGTGCCTGCAATGAATCCTTCTTTGAAAATAAAGATTGGTTTGACCCAGTGGAAAATGAAGCTATACATGAGGTGTACGCAAGACTTGGACCTATAGTAGCCAACGCTATGCTTAAATGTGTAGCGTTTTGTGATGCTATCGTGGAGAAAGGTTACATAGGTATTATTACACTTGATAACCAAGACCTTAATGGTAATTTTTACGACTTCGGTGATTTCGTAAAGACAGCGCCTGGTTTTGGATGTGCTTGCGTGACGTCATATTATTCTTATATGATGCCCTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAATTTTGTGAAAAGTGACATTTATGGTTCTGATTATAAGCAGTATGATTTGCTAGCTTATGATTTTACAGACCATAAAGAAAAGCTGTTCGAAAAATATTTCAAACACTGGGACCGCACATACCATCCTAACTGCTCTGATTGTACAAGTGATGATTGTATCATTCATTGTGCTAATTTTAACACATTGTTTTCAATGACCATACCCAACACTGCTTTTGGACCTCTTGTACGTAAAGTCCACATAGATGGTGTGCCAGTTGTTGTTACTGCTGGTTACCATTTTAAACAGTTGGGTATTGTGTGGAATCTTGATGTTAAATTAGACACTATGAAGTTGACTATGACAGATCTTCTTAGGTTCGTCACTGACCCTACATTACTTGTAGCATCAAGCCCTGCATTGTTAGATCAGCGCACTGTCTGTTTTTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTGAAACCAGGTCACTTTAACAAGGATTTCTACGATTTTATAACAGAGCGTGGATTCTTTGAGGAGGGATCTGAGTTGACGTTGAAACATTTCTTCTTTGCACAGGGTGGTGAAGCCGCTATGACAGATTTTAACTACTACCGTTATAACAGAGTTACTGTTTTAGACATCTGTCAGGCGCAATTTGTTTATAAAATTGTGTGTAAGTACTTTGATTGTTACGATGGTGGCTGCATCAATGCTCGAGAGGTTGTTGTTACCAACTACGACAAGAGTGCTGGTTATCCACTTAATAAATTTGGTAAGGCAAGACTTTACTATGAGACTCTGTCATATGAGGAGCAGGATGCGATTTTTGCATTAACAAAGAGAAATGTTCTACCCACAATGACACAAATGAATTTGAAATATGCTATATCTGGAAAGGCTAGAGCTCGCACTGTAGGAGGAGTGTCACTCCTTTCGACAATGACTACGAGACAATACCACCAGAAGCATTTAAAGTCTATTGCTGCTACACGTAATGCCACTGTTGTTATTGGAACGACTAAGTTCTACGGTGGCTGGGATAATATGTTAAAGAATTTGATGCGTGATGTAGATAACGGCTGTTTGATGGGATGGGACTATCCAAAGTGCGACCGTGCTTTGCCTAATATGATACGAATGGCTTCTGCAATGGTATTGGGTTCTAAGCACATTGGGTGTTGTACACATAGTGATAGGTTCTATCGCCTCTCTAACGAGTTAGCTCAAGTACTTACAGAGGTTGTGCATTGCACAGGTGGTTTTTATATCAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAATTCGGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGACTCAAACACCTGTAACAATGTTACAGTTAAGTCCATACAACGCAAGATATATGATAATTGTTATCGAAGTAGCAGTGTTGATGATGACTTCGTTGTTGAGTATTTTAGCTATTTAAGAAAGCACTTTTCTATGATGATTTTGTCAGATGATGGCGTGGTTTGTTACAACAAAGACTATGCTGATCTTGGTTATGTAGCAGACATTAGTGCTTTTAAAGCTACTTTGTATTACCAGAATAATGTTTTTATGTCTACAGCCAAGTGTTGGGTAGAACCAGACCTTAATGTTGGACCACACGAATTTTGTTCACAACACACACTACAAATTGTAGGACCGGATGGTGATTATTATTTACCATACCCAGACCCTTCTAGAATCTTGTCAGCAGGTGTTTTCGTTGATGACATCGTTAAAACAGATAACGTCATTATGCTTGAACGTTATGTGTCTTTAGCAATCGATGCGTATCCACTTACAAAACACCCTAAACCCGCATTTCAAAAAGTGTTTTATGCATTGTTAGATTGGGTTAAACATTTACAGAAGACTCTAAATGCTGGTATACTTGATTCATTTTCTGTCACTATGTTGGAGGATGGTCAAGATAAATTCTGGAGTGAAGAGTTCTATGCCAGTCTTTACGAAAAGTCTACTGTTTTGCAAGCTGCCGGTATGTGTATTGTTTGTGGTTCACAAACTGTGTTACGTTGCGGAGACTGTTTAAGGAGACCTCTTTTATGCACTAAGTGCGCTTACGACCATGTCATGGGTACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGCTATAATGGTTGTACTGTTAATGATGTAACAAAATTGTTTTTGGGAGGTCTTAACTATTATTGTACTGAACATAAACCACAATTGTCATTCCCGCTCTGTGCTAATGGCAATGTGTTTGGTCTGTACAAGAGTAGTGCAATTGGTTCTGAGGACGTTGACGATTTCAATAAACTTGCAATCTCGGACTGGACCAATGTAGAAGATTACAAACTTGCTAATAATGTCAAAGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCAAAGGAGGAGTCTGTTAAAGCTGAATATGCTTATGCCATATTAAAGGAGGTGGTCGGCCCTAAGGAAGTTGTACTCCAATGGGAATCCTCTAAGGTTAAACCTCCACTTAACAGAAATTCTGTTTTCACATGTTTTCAGCTAAACAAGGATACTAAAATTCAGTTAGGTGAATTTGTGTTTGAGCAGTCAGAGTATGGTAGTGAATCTGTTTACTACAAGAGTACTAGCACTACTAAGCTGACACCGGGTATGATTTTTGTGTTGACATCTCATAACGTGAGTCCACTTAAAGCTAATATCTTAGTCAACCAAGAGAAGTACAATACCATATCCAAGCTCTATCCTACGTTCAACATAGCGGAAGCCTATACCACATTGGTGCCTTACTATCAAATGATTGGTAAGCAAAAGTTTACAACTATCCAAGGTCCTCCTGGTAGTGGTAAATCACATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAAGCTAGGATCGTCTACACAGCATGTTCACATGCTGCTGTGGATGCATTGTGTGAAAAGGCTTCTAAGAACTTTAATGTGGATAAGTGTTCAAGGATAATACCCCAAAGAATCAGAGTTGACTGCTATATGGGTTTTAAACCTAATAATACTAATGCACAGTACTTGTTTTGTACAGTTAATGCTTTACCTGAAGCTAATTGCGACATCGTAGTTGTGGATGAAGTCTCAATGTGTACAAATTATGATCTCAGTGTTATAAATAGTAGACTGAGTTACAAGCACATTGTTTACGTGGGAGACCCACAACAGCTTCCAGCTCCTAGAACCTTGATTAATAAGGGTACACTCCAGCCTGAAGATTACAATGTTGTAACCCAGAGAATGTGTAAACTAGGACCTGATGTATTTTTGCATAAATGCTATAGATGCCCAGCTGAAATTGTTAAGACAGTCTCCGCGCTTGTTTATGAGAATAAGTTTTTGCCTGTCAACCCAGAGTCAAAGCAGTGCTTTAAAATGTTTGTAAAAGGTCAGGTGCAGATTGAATCCAACTCTTCTATAAACAATAAGCAACTAGATGTTGTTAAGGCATTCCTAGCACATAATCCAAAATGGCGTAAAGCCGTTTTTATCTCACCCTATAACAGTCAGAACTATGTCGCAAAACGTCTACTCGGTTTGCAAACACAAACGGTAGACTCTGCTCAAGGTAGTGAGTATGATTATGTCATTTACACACAGACTTCTGATACGCAGCATGCTATTAATGTCAACAGGTTTAATGTTGCCATTACTAGAGCAAAGGTTGGTATTCTCTGTATCATGTGTGATAGAAAGATGTATGACAATCTTGATTTCTATGAACTCAAAGATTCAAAAGTTGGCTTGCAAGCAAAACCTGAAACGTGTGGTTTGTTCAAAGATTGTTCAAAGACTGATCAATACATACCACCAGCATATGCTACAACATATATGAGTCTGTCTGAAAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAGGATGTTAAATATGCTAATGTTATCTCATATATGGGATTCAGGTTTGAGGCCAATGTACCAGGCTATCACACATTGTTTTGCACACGAGACTTTGCTATGCGTAATGTGAGATCATGGTTAGGGTTTGATGTCGAAGGTGCACATGTCTGTGGTGATAACATCGGAACTAATGTACCACTACAGCTGGGTTTTTCAAATGGTGTAGATTTTGTAGTACAAACTGAGGGATGTGTTGTTACTGAGAAAGGTAATAGTATTGAGGTTGTAAAGGCAAGAGCACCACCGGGTGAGCAATTTGCACATTTGATTCCACTTATGAGAAAAGGTCAGTCTTGGCACATTGTTAGACGTCGTATAGTGCAGATGGTTTGTGACTATTTCGACGGTTTATCTGACATCCTAATTTTCGTGCTTTGGGCTGGTGGTCTTGAGCTTACAACTATGAGATACTTTGTTAAAATTGGAAAACCACAGAAATGTGATTGCGGCAAAATTGCAACGTGTTATAACAGCTCGCAGTGTGTCTATGCTTGTTTTAAACATGCATTAGGATGTGATTACTTGTACAATCCTTACTGCATTGATATTCAACAATGGGGTTATACAGGATCCTTGAGCATGAACCATCATGAAGTTTGTAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGGTGCCTTGCTATATATGATTGTTTTGTCAAGCGTGTAGATTGGTCCATTGTGTACCCATTTATTGATAATGAAGAAAAGATCAATAAAGCTGGTCGCATTGTACAATCACATGTCATGAGAACTGCTCTTAAGGTTTTCAACCCTGCTGCAATTCACGATGTTGGTAATCCTAAAGGTATTCGTTGTGCTACAACATCTATACCATGGTTCTGTTATGACCGTGATCCTATTAATAACAATGTTAGATGTCTGGAGTATGATTACATGGTACATGGACAAATGAATGGTTTAATGTTATTTTGGAATTGCAACGTAGACATGTACCCGGAGTTCTCGATTGTTTGTAGATTTGATACTCGAATTCGCTCAAAATTGTCATTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCATTTCACACACCAGCTTATGATAGAAGAGCATTTGCTAAGCTTAAACCTATGCCATTCTTTTACTACGATGAGAGTGATTGTGAGTTTATTGATGGACAACCTAATTATGTACCACTTAAAGCTAATGTCTGCATAACTAAATGCAACATAGGTGGTGCAGTCTGTAAGAAACATGCAGCACTTTACAGAGCATATGTTGAAGACTACAACACTTTCATACAAGCTGGTTTTACAATTTGGTGCCCTCAAAATTTTGATACATATATGTTGTGGCAAGGTTTTGTTAATAGCAAAGCACTCCAGAGTTTGGAAAACGTAGCCTTCAATGTCGTCAAGAAAGGTGCCTACGCTGATTTAAAAGGTGACTTACCAACAGCAGTTATAGCTGATAAGATCATGGTGAGGGATGGACCTACTGACAAGTGTATTTTCACAAATAAAACTAGTTTGCCTACGAATGTGGCTTTTGAGCTGTATGCAAAACGCAAACTTGGACTCACACCTCCGTTAACAATACTTAGAAATCTAGGTGTTGTCGCAACACATAAATTCGTGTTGTGGGATTATGAAGCCGAATGTCCTTTCTCAAACTTTACTAAGCAAGTGTGTGCGTACACTGATCTTGATGGTGAAGTTGTAACATGTTTTGATAATAGTATTAGTGGTTCTTTTGAACGCTTTACTACTACGAAAGATGCAGTGCTTATTTCTAATAACGCTGTGAGGGGACTCAGTGCCATTAAATTACAATATGGCTTTTTGAATGATTTACCTGTAAGTACTGTAGGAAACAAACCTGTCACATGGTACATCTATGTGCGCAAGAACGGTGAGTACGTCGAACAGATTGACAGTTATTACACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGACTTTTTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACATGTTGTATTCGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCACAAGTGCGCCTAGCAAAAATGGGTTTGTTTTCTGTCCAAGAATTTATGAGTAATTCTGACAGTACACTGAAAAGTTGTTGTATAACATACGCTGACGATCCGTCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTAGACGATTTTGTGACTATCGTTAAGGGCTTAGATCTTAACGTTGTGTCGAAAGTTGTGGATGTTATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAACTCACAAATTAAAACCTTCTATCCACAACTCCAGTCTGCTGAGTGGCATCCTGGCTATAGCATGCCTACACTTTACAAAATACAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAGTTACCTGACGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATATCTCAATACCACTACACTGTGTGTTCCACATAAAATGCGTGTTCTGCATTTGGGAGCAGCAGGTGCTAATGGTGTTGCCCCTGGTACCACTGTATTAAGAAGATGGTTGCCAGACGATGCCATATTGGTTGATAATGATATGAGGGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGACTGTACTAATCTTTATATAGAGGACAAATTTGATTTACTTATCTCTGATTTATATGATGGCTCAACCAAGTCTATAGACGGTGAAAACATGTCGAAAGATGGCTTCTTTACATATATTAATGGTTTTATTAATGAGAAGCTAGCGCTTGGAGGTTCTGTAGCCATCAAAATCACTGAATTTAGCTGGAATAAAAGTTTATATGAATTAATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACCTCGTCATCGGAAGGCTTTCTGATAGGTATCAACTACTTAGGACCATACTGTGACAAGGCTATAGTGGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCCACAATTATGGCGTTGTCACACAACTCAGTCCTAGATACTCCAAAATTCAAGTGTCGTTGCAATAACGCACTTGTTGTTAATTTAAAAGAAAGAGAATTAAATGACATGGTTATTGGATTACTAAGGAAGGGTAAAATACTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAATCACTTTGTTAACACACCA >26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ATGAGTTCCAAACAATTTAAGATCCTCGTTAATGAGGACTACCAAGTCAACGTGCCTAGTCTTCCTTTCCGTAACGCTTTGCAGGAAATTAAGTACTGCTACCGTAACGGTTTTGAGGGCTATGTTTTCGTACCTGAATACCGTCGTGACCTAGTTGATTGCGATCGTAAGGATCACTACGTCATTGGTGTTCTGGGTAACGGAATAAGTGATCTTAAACCTGTTCTCCTTACCGAACCTTCCGTCATGTTGCAAGGCTTTATTGTTAGAGCTGGCTGCAATGGCGTTCTTGAGGACTTTGACCTTAAAATCGCCCGTACTGGAAATGGCGCCATATATGTAGATCAATACATGTGTGGTGCGGATGGAAAACCAGTTATTGAAGGTGAGTTTAAGGATTATTTCGGTGATGAGGACGTTATCATCTATGAAGGAGAGGAGTACCATTGTGCCTGGCTAACAGTGCGCGATGAAAAACCTTTATGTCAACAAAATCTCCTCACAATTAGGGAAATCCAATACAATCTGGACATCCCACATAAGTTGCCTAATTGTGCTATCAGAGAGGTAGCACCACCAGTCAAGAAGAATTCCAAGGTTGTTCTTTCTGAAGAGTATAAAAAGCTCTATGACATCTTTGGTTCACCATTTATGGGCAATGGGGACAGTCTTAACAAGTGTTTTGACAGCCTCCACTTCATTGCTGCCACTCTTAAGTGTCCTTGTGGCGCCGAGAGTAGTGGTGTTGGTGATTGGACTGGTTTTAAGACTGCTTGTTGTGGTCTTCAAGGCAAAGTTAAAGGCGTCACATTAGGTGCTGTTAAACCAGGTGATGCCGTTGTCACTAGCATGAGTGCAGGTAAGGGTGTAAAATTCTTTGCTAATAGTGTACTCCAATATGCTGGTGATGTGGAAAATGTCTCTGTTTGGAAAGTGATTAAAACTTTCACTGTTAATGAGACTGTCTGCACCGCTGATTTTGAAGGCGAATTGAACGACTTCATTAAACCAGAGAGTACTTCACCTGTTTCATGTTCTATTAAGAGAGCGTTCATTACTGGTGAGGTTGATGATGCAGTCCATGACTGTATTATCTCAGGAAAGTTGGACCTTAGTACTAACCTTTTTGGTGGTGCTAACCTGCTTTTCAAGAAAACGCCCTGGTTTGTGTTAAAGTGTGGTGCTATTTTTGCTGATGCTTGGAAAGTTGTTGAAGAACTGCTTTGTTCTCTCAAACTTACATACAAGCAAATCTATGATGTAGTAGCATCACTTTGCACTTCTGCCTTTACTATTATGGATTACAAACCTGTATTTGTAGTTGCATCTAATAGTGTTAAGGATCTCGTTGACAAGTGTGTCAAAATTCTTGTGAAAGCCTTTGATGTTTTCACACAGACAATTACCATTGCGGGTGTGGAGGCTAAGTGCTTTGTGCTTGGCTCTAAATACTTGCTTTTTAATAATGCACTTGTTAAGCTTGTCAGCGTTAAAATACTTGGCAAGAGGCAGAAAGGTCTTGATAGTGCATTCTTTGCCACTAATTTGATTGGTGCTACTGTTAAGGTGACACCACAAAGAACTGAGGCAGCCAATATTAGTTTGAATAAAGTAGATGATGTTGTCACACCTGGTGAAGGTCATGTTGTCATTGTAGGCGACATGGCTTTTTACAAGAGTGGAGAGTACTACTTTATGATGGCAAGTCCTGATTCAGTTCTCATTAATAACGTCTTTAAAGCAGCTCGAGTGCCATCTTATAACATTGTTTACAATGTGGATGATGATACCAAGAGTAAGATGTCATCTAAAATTGGAACGCCATTTGAATTTGATGGTGATGTGGATGCTGCTATTGTTAAGATTAACGACTTACTTGTTGAGTTTAGACAAGAAAAGTTTTGTTTCAGAGCACTTAAGGATGGTGAAAGTATCTTGGTTGAGGCATACCTTAAGAAATATAAAATGCCAATTTGTCTCAAAAATCATGTTGGTTTATGGGACATCATAAGACGCGATTCTGATAAGAAGGGTTTTCTTGACACTTTCAGTCATCTTAATGAATTGGAGGATGTCAAGGATGTAAAAATTCAGTCTATTAAAAATATCCTTTGCCCTGACCTTCTGTTAGAATTAGATTTTGGTGCAATTTGGTATAGATGTATGCCAGCCTGCTCTGATGTGTCTATTTTGGGTAATGTTAAAATCATGCTAGGTAATGGTGTTAAAGTGATTTGTGATGGCTGCCATGGTTTTGCTAACCGTTTAACGGTTAATTACAGCAAACTGTGTGACACAGCTCGTAAAGACATTGAAATTGGTGGTATACCATTTTCCACCTTTAAAACACCATCTAGCAGCTTCATTGACATGAAAGATGCCATCTATTCTGTGGTTGAATACGGTGAAGCATTTTCCTTTAAGACTGCAAGTGTACCTGTAACTAATAGTGGTACTGTCAAAAATGACGACTGGTCAGACCCCATTTTGTTAGAACCTGCAGATTATGTCGAACCTAAAGATAACGGTGATGTAATTGTCATTGCTGGATACACCTTTTACAGGGATGAGAACGATCACTTTTATCCATATGGTTCCGGCATGGTTGTGCAGAAGATGTACAACAAGATGGGTGGTGGTGACAAGTCAGTTTCATTTTCAGACAACGTTAATGTTAAAGAGATAGAACCTATTACACGTGTCATGCTAGAATTTGAATTTGACAATGAGGTGGTAACACAGGTTCTTGAAAAAGTCATTGGTGCCAAATATAAGTTTACAGGTACCACTTGGGAAGAATTTGAAGATTCTATTTCTGAGAAACTTGACAAGGTTTTCGACACGCTTGCTGAACAGGGTGTAGAACTTGAAGGTTACTTCATTTATGACACTTGTGGCGGATTTGACATTAATAATCCAGATGGTGTTATGATTTCACAGTATGATCTTAACTCAGCTGTTGATGTCAAAAGTGATTCTGATGCAAGCGTGGAAGACACATCTTCGATTTCTGATAACGAAGATGTTGAACAAATAGAAAAAGAGAACGTCTCAGCTGCTGATGTTACAGTTGTAGATGTTGAAGAATTTGTTGAGCAAGTTTCTCTTGTTGACACCGAAGAACAACTCCCCTCAGTAGAGGAAAAAGTTGAAGGCTCTGCTAAAGATGACCCGTGGGCTGCTGCTGTTGATGAACAGGAAGCTGAACAACCTAAACCTTCCTTAACTCCATTTAAGACAACAAATCTTAATGGTAGAATTATTCTTAAACAACAAGATAACAATTGTTGGATAAACGCTTGCTGTTACCAGTTGCAAGCTTTTGACTTTTTCAACCATGAATTATGGGATGGTTTTAAGAAAGATGACGTTATGCCTTTCGTAAACTTCTGTTATGCAGCTCTAACTTTGAAGCAGGGTGATTCAGGAGACTCAGAATACCTTTTGGAGACGATGCTCAATGATTATAGTACAGCTAAAGTTGTTCTTAGTGCTAAGTGTGGCTGTGGTGTTAAAGAAATAGTTTTAGAGCGAACTGTGTTTAAGCTCACACCTCTTAAGAATGAGTTTAAATATGGTGTCTGTGGTGACTGTAAACAAATTAACATGTGTAAGTTTGCAAGCGTGGAAGGTTCAGGTGTTTTTGTTCATGATAGA---ATTGAAAAACGAACACCTGTGTCACAATTCATTGTGACACCTATTATGCACGCAGTTTACACAGGTACAACACAGAGTGGTCATTACATGATTGAGGATTGCACTCATGATTATTGTGTGGATGGTATGGGAGTTAAACCCCGTAAACAAAAGTTTTACACATCCACCTTGTTTCTTAATGCAAATGTAATGACA---------------------------------------GCTGACTCTAAAACTACAATCGAACCAACTGCACCTGTTAAGGATAAGCTTGTAGAAGAATGTCAAAGTCCTAAAGACTTTATATTACCCTTTTACACAGCGGGGAAAGTGTCATTTTACCAAGGAGATTTGGATGTTTTGATTAACCTTCTTGAACCTGACGTTGTTGTTAACGCTGCTAATGGTGATCTTAGGCACATGGGTGGTGTTGCTAAAGCCATTGATGTGTTCACAGGTGGTAAGTTGACGAAACGTTCTAAAGAATATCTTAGGACTAATAAAACAATAGCTCCTGGTAATGCTGTGCTTTTTGAAAACGTACTTGAGCATCTTAGTGTATTGAATGCTGTCGGACCACGTAATGGTGACAGTAGAGTTGAAGGTAAACTCTGTAACGTTTACAAAGCAATTGCCAAGTGTGACGGTAAGATATTAACACCACTTATTAGTGTTGGTATCTTCAAAGTCAAACTGGAAGTTTCATTGCAGTGTCTACTTAAAACTGTCACAGATAGGGAATTAAATGTCTTTGTTTACACTGACCAAGAGAGAATTACCATAGAAAATTTCTTCAATGGTACTATTCCTGTCAAGGTAACGGAAGACACTGTGAATCAAAAGCGTGTGTCTGTGGCACTTGATAAAACTTATGGTGAGCAACTCAAAGGCACTGTTGTTATTAAAGACAAAGATGTTACTAACCAGTTGCCAAGTGTGTCAGATGTTGGTGAAAAAGTCGTTAAGGCATTGGATGTTGATTGGAATGCTTACTATGGCTTTTCAAATGCAGCGGCTTTTAGTGCCAGTTCCCATGATGCTTATATATTTGAAGTTGTAACACACAACAACTTCATTGTTCATAAGCAGACTGATAATAATTGTTGGGTTAATGCAATTTGTTTAGCATTACAAAGGCTTAAACCAACATGGAAGTTTCCTGGTGTTAAAAGTTTGTGGGATGATTTTCTTGTTCGTAAAACTGCTGGATTTGTCCACATGCTATACCACATTTCAGGCTTAAAGAAAGGACAACCTGGTGATGCTGAGTTGACTTTACATAAGCTTGGTGAGTTGATGTTGAGTGATAGTGCTGTCACCATCACACATACAACTGCATGTGACAAGTGTGCAAAAACTGAAACTTTTACAGGCCCTGTGATAGCAGCACCTCTTCTGATCCATGGCACTGATGAAACCTGTGTTCATGGTGTAAGTGTTAATGTTAAAGTGACAAGTGTTAGAGGCACTGTGGCTATCACTTCCTTAATCGGTCCTGTTGTAGGAGATGTTATTGATGCAACTGGTTATATTTGTTATACTGGATTGAACTCACGTGGTCATTATACCTATTATGATAATCTTAATAGTTTAATGGTTGATGCTGAAAAGGCCTATCATTTTGAGAAAAACCTCTTACAGGTTACAACAGCCATTGCTAGTAATTTTATTGCCTACACACCTAAGAGTGAGATCTATCCTAAGGTTCAACCAGTTAAAGAATCACATACAGCTCGTGTTTTTAGTGAGGTTGAAGAAATTCCTAAAAATGTAGTTCGTGAAACAAAATTGCTAGCTATTGAGAGTGGTGCAGATTACACACTCTCAACACTTGGTAAATATGCTGATGTTTTCTTTATGACCGGTGATAAAATTCTTAGGTTTCTCCTTGAAGTCTTTAAATATTTATTGGTTGTTTTTATGTGTCTTAGAAAATCTAAGATGCCTAAAGTTAAGGTAAAACCACCGCATGTATTCAAAAACTTAGGTGCTAAAGTTAGGACATTGAATTACGTAAGACAATTGAACAAACCAGCGTTATGGCGTTACGTAAAACTAGTGTTACTTTTAATAGCATTGTACCACTTTTTCTACTTGTTTGTTAGTATACCAGTAATGCACAAATTAGTGTGTAGTAGTAGTGTACAAGCGTATAGTAATTCTAGTTTTGTGAAATCAGAAGTTTGTGGTAATTCTATTCTATGCAAGGCGTGTCTGGCATCTTATGATGAATTGGCTGATTTTGATCATCTTCAGGTGTCATGGGATTATAAGTCGGATCCGCTATGGAATAGAGTTATACAATTGTCTTACTTCACATTCTTGGTTGTTTTTGGCAATAATTATGTTAGATGTCTTCTTATGTATTTTATCTCTCAGTACCTTAACTTGTGGTTGTCTTATTTTGGTTATGTTAAGTATAGTTGGTTTTTGCATGTCATCAACTTTGAATCAATTTCTGTTGAATTTGTGATCATAGTTGTAGTTTTTAAGGCAGTTCTCGCACTTAAACACATCTTCTTTTCATGCAATAACCCATCATGTAAGACTTGTTCTAAGATTGCTAGGCAGACACGTATTCCTATACAAGTTGTGGTTAATGGTTCAATGAAGACTGTGTATGTCCACGCTAATGGTACTGGTAAACTCTGCAAAAAGCATAATTTCTACTGTAAAAATTGTGACTCTTACGGTTTTGACCACACATTCATCTGTGACGAGATTGTGCGTGACCTGGGTAACAGTATCAAGCAAACTGTTTATGCCACTGATAGATCATACCAGGAAGTCACAAAGGTTGAATGCTCTGGTGGCTTTTACAGGTTTTATGTTGGTGATGAATTCACGGCATACGACTATGATGTAAAAAACAAGAAGTATAGTAGCCAGGAAGTGCTTAAAACTATGTTCCTGCTTGATGACTTCATCGTCTATAGTCCATCAGGGTCTTCCCTCGCTAGTGTTAGAAATGTCTGTGTTTATTTTTCACAACTGATTGGTAGGCCTATTAAAATTGTTAATAGTGAACTTCTTGAGGATTTATCTGTAGACTTTAAGGGAGCACTTTTTAATGCTAAGAAAAATGTTATTAAAAACTCTTTTAATGTTGATGTGTCAGAATGTAAAAACCTTGAAGAGTGTTATAAAGCATGCAACCTTGATGTGACATTTTCTACTTTTGAAATGGCTGTTAATAACGCTCATAGATTTGGTATATTGATTACAGACCGCTCCTTTAACAATTTTTGGCCATCAAAAATTAAGCCAGGTTCTTCTGGTGTCTCTGCTATGGACATTGGTAAGTGCATGACTTTTGATGCAAAGATTGTTAATGCAAAGGTTTTAACGCAACGAGGTAAAAGTGTTGTATGGCTTAGTCAGGACTTTTCTACTCTTAGTTCTACAGCACAGAAAGTTTTAGTTAAAACTTTTGTAGAAGAAGGTGTGAACTTTTCACTAACGTTTAATGCTGTGGGTTCAGATGAAGACCTCCCCTATGAGAGATTCACTGAATCAGTTTCACCAAAGAAAGGTTCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAGATCTTCTGGTGTTTGGTTTTGTTTATTACCTTGTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGATGGTTATGAATACATGGTTATTAAGAATGGCATTGTTCAACCATTTGATGATTCTATTAACTGTGTACATAACACATACAAAGGCTTTGTTATGTGGTTTAAAGCTAAATATGGTTTTGTACCTACATTCGACAAGTCTTGTCCTATTGTTTTAGGAACTGTTTTTGACTTAGGCAATATGAGACCAATCCCTGATGTGCCAGCTTATGTAGCACTTGTTGGTAGATCCCTAGTGTTTGCGATTAATGCAGCATTTGGTGTTACTAATGTTTGTTATGATCATACAGGTTCTGCTGTGAGTAAAAACTCTTATTTTGATACCTGTGTATTTAATGCTGCTTGCACCACTCTATCAGGCCTTGGAGGTACAATTGTTTATTGTGCCAAACAAGGACTTGTGGATGGTGCTAAACTTTATAGCGAATTGATGCCTGACTATTTTTATGAGCACGCTAGTGGTAACATGGTTAAAATACCAGCCATTATTAGGGGTTTTGGTCTGAGATTCGTAAAAACACAGGCTACAACTTATTGCAGAGTAGGGGAGTGTGTTGAAAGTCAGGCCGGTTTTTGCTTTGGTGGTGACAACTGGTTTGTTTATGATAAAGAGTTTGGTGATGGTTATATTTGTGGAAGCTCTACATTGGGTTTTCTCAAAAATGTCTTTGCTCTCTTTAACTCTAACATGTCTGTAGTAGCCACATCCGGTGCTATGTTGGTTAACATTATCATCGCATGTTTGGCTATAGCGGTCTGTTATGGTGTTCTTAAATTTAAGAAAATCTTTGGTGATTGTACTCTCCTAGTTGTTATGATTATTGTTACATTGGTTGTTAACAATGTTTCTTATTTTGTGACCCAAAACACATTCTTTATGATTGTTTATGCCATTATTTATTACTTTACAACAAGGAAATTATCATACCCTGGTATCTTGGATGCAGGATTCATTATTGCCTATGTGAACATGGCCCCATGGTATGTGCTTGTGCTGTACATAGTGGTCTTCTTATATGATTCTCTACCCTCACTATTCAAACTTAAGGTTACAACAAACCTTTTTGAAGGGGATAAATTTGTTGGTAGTTTTGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAGACACTTGTTAATTCTACATCCTTGGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTACAAGTACTATACTGGTTCAATGGGAGAGGCCGATTACCGCATGGCTTGTTATGCTCATTTAGGTAAGGCATTAATGGATTATTCAGTCTCAAGAAATGATGTTCTTTACACACCACCAACGGTCAGTGTTAATTCAACATTACAGTCAGGACTGAGAAAAATGGCACAGCCTAGTGGTATTGTGGAACCCTGCATTGTGAGGGTAGCCTATGGCAATAATGTGCTTAATGGTTTGTGGCTTGGAGATGAAGTTATCTGCCCTAGACACGTCATTGCAAGTGACACATCACGTGTGATCAATTATGACAATGAGTTGTCCGGTGTGCGGTTACATAACTTCTCTATAGCCAAAAATAATGTGTTTTTGGGCGTTGTGTCTGCCAAGTATAAGGGTGTGAACCTTGTGCTTAAGGTTAATCAGGTAAACCCCAACACACCAGAACACAAATTCAAATCCGTGAAGTCTGGTGAGAGTTTTAACATTCTCGCTTGTTATGAAGGCTGTCCCGGTAGTGTCTACGGTGTGAACATGAGAAGTCAGGGTACCATCAAAGGTTCATTTATTGCTGGTACCTGTGGGTCAGTAGGTTATGTATTAGAAAATGGAATACTCTATTTTGTGTACATGCACCACTTAGAATTAGGTAATGGCTCTCATGTTGGTTCAAACCTTGAGGGGGTAATGTATGGCGGTTATGAAGATCAACCTAGCATGCAATTGGAGGGTACTAACGTCATGTCATCAGATAATGTAGTTGCATTTTTGTATGCTGCTCTTATTAATGGTGAAAGATGGTTTGTTACAAATGCATCAATGACGTTAGAATCTTACAATGTATGGGCCAAAACTAACAGTTTTACGGAACTTGTTTCAACTGATGCTTTTAATATGTTGGCTGCAAAAACTGGTTATAGTGTTGAGAAGTTGCTTGAATGTATTGTTAGACTCAACAAAGGTTTTGGAGGACGCACTATACTCTCTTATGGTTCATTGTGTGATGAATTCACACCTACGGAAGTTATAAGGCAAATGTATGGTGTTAATCTTCAGAGTGGTAAAGTGAAATCTCTCTTTTACCCTGTGTTGACAGCCATGGCTATTCTATTTGCTTTTTGGTTAGAGTTCTTTATGTACACACCCTTTACATGGATTAATCCATCGTTTATCAGTGTTATTCTAGCTATTACAACTTTTTTCTCTGTGTTATTAGTTGTTGGGATTAAACACAAAATGTTATTCTTTATGTCTTTTGTAATGCCTAGTGTTGTGTTGGCCACCGTTCATAATGTTGTATGGGATATGACTTATTATGAAAGCTTACAAGCTCTTGTGGCGAACACTAACACAACATTTTTACCAGTAGATATGCAAGGCGTTATGCTTGCTTTGTTCTGTGTTGTTGTGTTTGTTACATACACTATAAGATTCTTTACATGCAAGCAATCCTGGTTTTCTTTATTTGTAACAACTGTCTTTGTGGTGTTCAACATTGTTAAGTTGCTAGGCATGGTAGGTGAACCATGGACTGAAGATCACATCTTGTTATGTCTTGTAAACATGCTTACCATGTTGATAAGTCTTACTACAAAGGACTGGTTTGTTGTTTTTGTATCATACAAATTTGCTTATTATGTCGTTGTTTATGTAATGCAACCATCCTTTGTTCAAGACTTTGGGTTTATTAAGTGTGTAAGCGTGATTTACATGGCATGTGGTTATTTGTTTTGCTGTTATTATGGTATTCTTTACTGGGTTAACAGATTTACATGCATGACGTGTGGTGTTTACCAATTCACTGTCTCACCGGCAGAGCTCAAGTATATGACTGCTAACAATTTGTCAGCACCTAAGACCGCATATGATGCCATGATTCTTAGTGTTAAATTGATGGGTATAGGTGGTGAGAGAAATATAAAAATCTCCACTGTACAGTCTAAACTCACAGAGATGAAATGCACAAACGTTGTGCTGCTTGGGCTTTTGTCTAAAATGCATGTTGAATCTAACTCAAAGGAGTGGAATTATTGTGTTGGGCTGCATAATGAGATTAATTTGTGTGATGACCCCGAAGTGGTTCTTGAAAAACTACTTGCACTCATCGCATTCTTTTTATCCAAACACAATACATGTGATCTTAGTGACCTTATCGACTCCTATTTTGATAACACCACTATTTTACAGAGTGTGGCTTCTGCTTATGCTGCTTTACCTAGCTGGATTGCATATGAAAAAGCTCGCGCGGATTTAGAAGAGGCTAAGAAAAATGATGTTAGTCCACAATTATTGAAACAGCTTACAAAAGCATGCAATATTGCTAAGAGCGAGTTTGAACGCGAGTCCTCGGTTCAAAAGAAGCTTGATAAAATGGCCGAGCAAGCTGCAGCTAGTATGTACAAAGAGGCAAGGGCTGTTGACAGAAAATCAAAAATAGTTTCTGCTATGCATAGTCTTCTTTTTGGTATGCTCAAGAAACTTGATATGTCCAGTGTTAATACTATTATTGAACAGGCCCGTAATGGTGTGTTGCCCCTGAGTATCATACCTGCTGCAGCAGCCACAAGACTTATTGTTGTAACACCTAATATTGAAGTGCTTTCCAAAATTAGGCAAGAAAACAATGTCCACTATGCAGGTGCTATCTGGTCAATTATTGAAGTCAAGGATGCTAATGGTGCTCAAGTCCATTTAAAAGAAGTCACAGCTGCCAATGAGTTGAACCTGACCTGGCCTTTGAGTATTACATGTGAGAGAACCACAAAGTTGCAAAACAATGAAATTATGCCAGGTAAACTTAAAGAGAAGGCTGTTAAAGCGTCTGCTACAATTGATGGTGATGCTTATGGTAGTGGTAAGGCCCTCATGGCTTCTGAAAGTGGTAAGAGCTTTATATATGCATTTATAGCGTCTGACAGCAACCTTAAGTATGTTAAATGGGAGAGCAATAATGATGTAATACCCATTGAACTTGAGGCCCCATTGCGCTTTTATGTAGATGGTGCTAATGGCCCTGAAGTTAAGTATCTTTACTTTGTGAAGAACTTGAACACTCTTAGACGTGGTGCTGTTCTGGGTTATATTGGCGCTACTGTTCGTTTGCAGGCTGGTAAACCTACTGAACACCCATCTAACAGTGGTTTATTAACCTTGTGTGCTTTCGCTCCTGACCCTGCTAAGGCATACGTTGATGCTGTTAAGAGAGGTATGCAGCCAGTTACTAATTGTGTGAAAATGCTCTCAAATGGTGCTGGTAATGGTATGGCTATTACAAATGGTGTAGAGTCTAATACGCACCAAGACTCTTATGGTGGTGCATCTGTGTGCATCTATTGTAGGTGTCATGTAGAACATCCTGCAATTGATGGATTGTGTCGTTATAAGGGTAAATTTGTTCAAGTACCAACCGGCACTCAAGATCCTATTAGATTTTGTATTGAAAATGAAGTCTGTGTTGTTTGTGGTTGCTGGCTTAATAATGGTTGCATGTGTGATCGTACTTCTATGCAAGGCACAACTGTTGACCAGAGTTATTTAAACCGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCACGTTAGTAGAGCTTTTGACATCTATAATAAAGATGTTGCATGTATTGGTAAATTCCTTAAGACTAATTGTTCCCGTTTTAGGAATTTGGACAAACGTGATGCCTACTATGTTGTCAAGCGTTGTACTAAGAGCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCAGTTGCTGAACATGACTTCTTTTTGTATAAGGAAGGTCGATGTGAATTCGGCAACGTCGCACGTAAGGATCTTACAAAGTACACTATGATGGATCTATGTTATGCCATTAGGAATTTTGATGAAAAGAATTGCGAAGTTCTTAAAGAAATACTCGTGACATTAGGTGCCTGCAATGAATCCTTCTTTGAAAATAAAGATTGGTTTGACCCAGTGGAAAATGAAGCTATACATGAGGTGTACGCAAGACTTGGACCTATAGTAGCCAACGCTATGCTTAAATGTGTAGCGTTTTGTGATGCTATCGTGGAGAAAGGTTACATAGGTATTATTACACTTGATAACCAAGACCTTAATGGTAATTTTTACGACTTCGGTGATTTCGTAAAGACAGCGCCTGGTTTTGGATGTGCTTGCGTGACGTCATATTATTCTTATATGATGCCCTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAATTTTGTGAAAAGTGACATTTATGGTTCTGATTATAAGCAGTATGATTTGCTAGCTTATGATTTTACAGACCATAAAGAAAAGCTGTTCGAAAAATATTTCAAACACTGGGACCGCACATACCATCCTAACTGCTCTGATTGTACAAGTGATGATTGTATCATTCATTGTGCTAATTTTAACACATTGTTTTCAATGACCATACCCAACACTGCTTTTGGACCTCTTGTACGTAAAGTCCACATAGATGGTGTGCCAGTTGTTGTTACTGCTGGTTACCATTTTAAACAGTTGGGTATTGTGTGGAATCTTGATGTTAAATTAGACACTATGAAGTTGACTATGACAGATCTTCTTAGGTTCGTCACTGACCCTACATTACTTGTAGCATCAAGCCCTGCATTGTTAGATCAGCGCACTGTCTGTTTTTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTGAAACCAGGTCACTTTAACAAGGATTTCTACGATTTTATAACAGAGCGTGGATTCTTTGAGGAGGGATCTGAGTTGACGTTGAAACATTTCTTCTTTGCACAGGGTGGTGAAGCCGCTATGACAGATTTTAACTACTACCGTTATAACAGAGTTACTGTTTTAGACATCTGTCAGGCGCAATTTGTTTATAAAATTGTGTGTAAGTACTTTGATTGTTACGATGGTGGCTGCATCAATGCTCGAGAGGTTGTTGTTACCAACTACGACAAGAGTGCTGGTTATCCACTTAATAAATTTGGTAAGGCAAGACTTTACTATGAGACTCTGTCATATGAGGAGCAGGATGCGATTTTTGCATTAACAAAGAGAAATGTTCTACCCACAATGACACAAATGAATTTGAAATATGCTATATCTGGAAAGGCTAGAGCTCGCACTGTAGGAGGAGTGTCACTCCTTTCGACAATGACTACGAGACAATACCACCAGAAGCATTTAAAGTCTATTGCTGCTACACGTAATGCCACTGTTGTTATTGGAACGACTAAGTTCTACGGTGGCTGGGATAATATGTTAAAGAATTTGATGCGTGATGTAGATAACGGCTGTTTGATGGGATGGGACTATCCAAAGTGCGACCGTGCTTTGCCTAATATGATACGAATGGCTTCTGCAATGGTATTGGGTTCTAAGCACATTGGGTGTTGTACACATAGTGATAGGTTCTATCGCCTCTCTAACGAGTTAGCTCAAGTACTTACAGAGGTTGTGCATTGCACAGGTGGTTTTTATATCAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAATTCGGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGACTCAAACACCTGTAACAATGTTACAGTTAAGTCCATACAACGCAAGATATATGATAATTGTTATCGAAGTAGCAGTGTTGATGATGACTTCGTTGTTGAGTATTTTAGCTATTTAAGAAAGCACTTTTCTATGATGATTTTGTCAGATGATGGCGTGGTTTGTTACAACAAAGACTATGCTGATCTTGGTTATGTAGCAGACATTAGTGCTTTTAAAGCTACTTTGTATTACCAGAATAATGTTTTTATGTCTACAGCCAAGTGTTGGGTAGAACCAGACCTTAATGTTGGACCACACGAATTTTGTTCACAACACACACTACAAATTGTAGGACCGGATGGTGATTATTATTTACCATACCCAGACCCTTCTAGAATCTTGTCAGCAGGTGTTTTCGTTGATGACATCGTTAAAACAGATAACGTCATTATGCTTGAACGTTATGTGTCTTTAGCAATCGATGCGTATCCACTTACAAAACACCCTAAACCCGCATTTCAAAAAGTGTTTTATGCATTGTTAGATTGGGTTAAACATTTACAGAAGACTCTAAATGCTGGTATACTTGATTCATTTTCTGTCACTATGTTGGAGGATGGTCAAGATAAATTCTGGAGTGAAGAGTTCTATGCCAGTCTTTACGAAAAGTCTACTGTTTTGCAAGCTGCCGGTATGTGTATTGTTTGTGGTTCACAAACTGTGTTACGTTGCGGAGACTGTTTAAGGAGACCTCTTTTATGCACTAAGTGCGCTTACGACCATGTCATGGGTACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGCTATAATGGTTGTACTGTTAATGATGTAACAAAATTGTTTTTGGGAGGTCTTAACTATTATTGTACTGAACATAAACCACAATTGTCATTCCCGCTCTGTGCTAATGGCAATGTGTTTGGTCTGTACAAGAGTAGTGCAATTGGTTCTGAGGACGTTGACGATTTCAATAAACTTGCAATCTCGGACTGGACCAATGTAGAAGATTACAAACTTGCTAATAATGTCAAAGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCAAAGGAGGAGTCTGTTAAAGCTGAATATGCTTATGCCATATTAAAGGAGGTGGTCGGCCCTAAGGAAGTTGTACTCCAATGGGAATCCTCTAAGGTTAAACCTCCACTTAACAGAAATTCTGTTTTCACATGTTTTCAGCTAAACAAGGATACTAAAATTCAGTTAGGTGAATTTGTGTTTGAGCAGTCAGAGTATGGTAGTGAATCTGTTTACTACAAGAGTACTAGCACTACTAAGCTGACACCGGGTATGATTTTTGTGTTGACATCTCATAACGTGAGTCCACTTAAAGCTAATATCTTAGTCAACCAAGAGAAGTACAATACCATATCCAAGCTCTATCCTACGTTCAACATAGCGGAAGCCTATACCACATTGGTGCCTTACTATCAAATGATTGGTAAGCAAAAGTTTACAACTATCCAAGGTCCTCCTGGTAGTGGTAAATCACATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAAGCTAGGATCGTCTACACAGCATGTTCACATGCTGCTGTGGATGCATTGTGTGAAAAGGCTTCTAAGAACTTTAATGTGGATAAGTGTTCAAGGATAATACCCCAAAGAATCAGAGTTGACTGCTATATGGGTTTTAAACCTAATAATACTAATGCACAGTACTTGTTTTGTACAGTTAATGCTTTACCTGAAGCTAATTGCGACATCGTAGTTGTGGATGAAGTCTCAATGTGTACAAATTATGATCTCAGTGTTATAAATAGTAGACTGAGTTACAAGCACATTGTTTACGTGGGAGACCCACAACAGCTTCCAGCTCCTAGAACCTTGATTAATAAGGGTACACTCCAGCCTGAAGATTACAATGTTGTAACCCAGAGAATGTGTAAACTAGGACCTGATGTATTTTTGCATAAATGCTATAGATGCCCAGCTGAAATTGTTAAGACAGTCTCCGCGCTTGTTTATGAGAATAAGTTTTTGCCTGTCAACCCAGAGTCAAAGCAGTGCTTTAAAATGTTTGTAAAAGGTCAGGTGCAGATTGAATCCAACTCTTCTATAAACAATAAGCAACTAGATGTTGTTAAGGCATTCCTAGCACATAATCCAAAATGGCGTAAAGCCGTTTTTATCTCACCCTATAACAGTCAGAACTATGTCGCAAAACGTCTACTCGGTTTGCAAACACAAACGGTAGACTCTGCTCAAGGTAGTGAGTATGATTATGTCATTTACACACAGACTTCTGATACGCAGCATGCTATTAATGTCAACAGGTTTAATGTTGCCATTACTAGAGCAAAGGTTGGTATTCTCTGTATCATGTGTGATAGAAAGATGTATGACAATCTTGATTTCTATGAACTCAAAGATTCAAAAGTTGGCTTGCAAGCAAAACCTGAAACGTGTGGTTTGTTCAAAGATTGTTCAAAGACTGATCAATACATACCACCAGCATATGCTACAACATATATGAGTCTGTCTGAAAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAGGATGTTAAATATGCTAATGTTATCTCATATATGGGATTCAGGTTTGAGGCCAATGTACCAGGCTATCACACATTGTTTTGCACACGAGACTTTGCTATGCGTAATGTGAGATCATGGTTAGGGTTTGATGTCGAAGGTGCACATGTCTGTGGTGATAACATCGGAACTAATGTACCACTACAGCTGGGTTTTTCAAATGGTGTAGATTTTGTAGTACAAACTGAGGGATGTGTTGTTACTGAGAAAGGTAATAGTATTGAGGTTGTAAAGGCAAGAGCACCACCGGGTGAGCAATTTGCACATTTGATTCCACTTATGAGAAAAGGTCAGTCTTGGCACATTGTTAGACGTCGTATAGTGCAGATGGTTTGTGACTATTTCGACGGTTTATCTGACATCCTAATTTTCGTGCTTTGGGCTGGTGGTCTTGAGCTTACAACTATGAGATACTTTGTTAAAATTGGAAAACCACAGAAATGTGATTGCGGCAAAATTGCAACGTGTTATAACAGCTCGCAGTGTGTCTATGCTTGTTTTAAACATGCATTAGGATGTGATTACTTGTACAATCCTTACTGCATTGATATTCAACAATGGGGTTATACAGGATCCTTGAGCATGAACCATCATGAAGTTTGTAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGGTGCCTTGCTATATATGATTGTTTTGTCAAGCGTGTAGATTGGTCCATTGTGTACCCATTTATTGATAATGAAGAAAAGATCAATAAAGCTGGTCGCATTGTACAATCACATGTCATGAGAACTGCTCTTAAGGTTTTCAACCCTGCTGCAATTCACGATGTTGGTAATCCTAAAGGTATTCGTTGTGCTACAACATCTATACCATGGTTCTGTTATGACCGTGATCCTATTAATAACAATGTTAGATGTCTGGAGTATGATTACATGGTACATGGACAAATGAATGGTTTAATGTTATTTTGGAATTGCAACGTAGACATGTACCCGGAGTTCTCGATTGTTTGTAGATTTGATACTCGAATTCGCTCAAAATTGTCATTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCATTTCACACACCAGCTTATGATAGAAGAGCATTTGCTAAGCTTAAACCTATGCCATTCTTTTACTACGATGAGAGTGATTGTGAGTTTATTGATGGACAACCTAATTATGTACCACTTAAAGCTAATGTCTGCATAACTAAATGCAACATAGGTGGTGCAGTCTGTAAGAAACATGCAGCACTTTACAGAGCATATGTTGAAGACTACAACACTTTCATACAAGCTGGTTTTACAATTTGGTGCCCTCAAAATTTTGATACATATATGTTGTGGCAAGGTTTTGTTAATAGCAAAGCACTCCAGAGTTTGGAAAACGTAGCCTTCAATGTCGTCAAGAAAGGTGCCTACGCTGATTTAAAAGGTGACTTACCAACAGCAGTTATAGCTGATAAGATCATGGTGAGGGATGGACCTACTGACAAGTGTATTTTCACAAATAAAACTAGTTTGCCTACGAATGTGGCTTTTGAGCTGTATGCAAAACGCAAACTTGGACTCACACCTCCGTTAACAATACTTAGAAATCTAGGTGTTGTCGCAACACATAAATTCGTGTTGTGGGATTATGAAGCCGAATGTCCTTTCTCAAACTTTACTAAGCAAGTGTGTGCGTACACTGATCTTGATGGTGAAGTTGTAACATGTTTTGATAATAGTATTAGTGGTTCTTTTGAACGCTTTACTACTACGAAAGATGCAGTGCTTATTTCTAATAACGCTGTGAGGGGACTCAGTGCCATTAAATTACAATATGGCTTTTTGAATGATTTACCTGTAAGTACTGTAGGAAACAAACCTGTCACATGGTACATCTATGTGCGCAAGAACGGTGAGTACGTCGAACAGATTGACAGTTATTACACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGACTTTTTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACATGTTGTATTCGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCACAAGTGCGCCTAGCAAAAATGGGTTTGTTTTCTGTCCAAGAATTTATGAGTAATTCTGACAGTACACTGAAAAGTTGTTGTATAACATACGCTGACGATCCGTCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTAGACGATTTTGTGACTATCGTTAAGGGCTTAGATCTTAACGTTGTGTCGAAAGTTGTGGATGTTATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAACTCACAAATTAAAACCTTCTATCCACAACTCCAGTCTGCTGAGTGGCATCCTGGCTATAGCATGCCTACACTTTACAAAATACAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAGTTACCTGACGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATATCTCAATACCACTACACTGTGTGTTCCACATAAAATGCGTGTTCTGCATTTGGGAGCAGCAGGTGCTAATGGTGTTGCCCCTGGTACCACTGTATTAAGAAGATGGTTGCCAGACGATGCCATATTGGTTGATAATGATATGAGGGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGACTGTACTAATCTTTATATAGAGGACAAATTTGATTTACTTATCTCTGATTTATATGATGGCTCAACCAAGTCTATAGACGGTGAAAACATGTCGAAAGATGGCTTCTTTACATATATTAATGGTTTTATTAATGAGAAGCTAGCGCTTGGAGGTTCTGTAGCCATCAAAATCACTGAATTTAGCTGGAATAAAAGTTTATATGAATTAATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACCTCGTCATCGGAAGGCTTTCTGATAGGTATCAACTACTTAGGACCATACTGTGACAAGGCTATAGTGGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCCACAATTATGGCGTTGTCACACAACTCAGTCCTAGATACTCCAAAATTCAAGTGTCGTTGCAATAACGCACTTGTTGTTAATTTAAAAGAAAGAGAATTAAATGACATGGTTATTGGATTACTAAGGAAGGGTAAAATACTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAATCACTTTGTTAACACACCA >TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTTCTCAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACACGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTTGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCCATCAGAAATTTTGATGAAAGGAACTGTGAAGTTCTCAAAGAAATACTTGTGATAGTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAGGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATTCGATAGTTGAAAAAGGCTATATAGGTGTTATAACACTTGACAATCAAGACCTTAATGGTAATTTCTACGATTTCGGAGATTTCGTGAAGACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTCACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATCATTCATTGTGCCAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACCGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACATGATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCTAGCCCTGCACTCTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAGCACTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGATGGAGGGTGCATTAGTGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATATGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCACCAGAAGCATTTGAAGTCAATTGCTGCAACACGTAACGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTCTGATGGGATGGGACTATCCAAAGTGTGACCGTGCTCTACCTAACATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGATTCTATCGCCTCTCCAATGAGTTAGCACAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATTTTCCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTAGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAGCGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGACGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTCGTGTGCTACAACAAAGATTATGCTGACTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAATGTCTTCATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTACTACCTTCCCTATCCAGATCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGATGCATACCCGCTTACAAAACATCCTAAGCCTGCTTATCAAAAAGTTTTTTATACTCTATTAGATTGGGTTAAACATTTACAGAAAAACTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCTACTGTCTTGCAAGCTGCAGGTATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAGTGTGCTTATGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATTACGCCATATGTGTGTAGTTTTAGTGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTAGGTTCAGAGGCTGTTGAAGATTTTAACAAACTTGCAGTCTCTGACTGGACTAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAAGAGGTTATCGGCCCTAAAGAAATTGTACTCCAATGGGAGGCTTCTAAGACTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGTACGAGTACTTATAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCACAACGTGAGTCCCCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATACAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAGGCGAGAATAGTCTACACTGCATGTTCCCATGCTGCTGTAGACGCCTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGACTAATACCTCAAAGAATCAGAGTTGACTGTTATACTGGCTTTAAGCCGAATAACACTAATGCGCAGTACTTGTTTTGTACTGTCAATGCTCTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGCACTAATTATGATCTTAGTGTCATAAATAGCCGGTTGAGTTACAAACACATTGTCTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTCTGATTAATAAAGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCCGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAACAAGTTTGTACCTGTCAACCCAGAATCAAAGCAATGCTTTAAAATGTTTGTAAAAGGCCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAATAAGCAACTAGAGGTTGTCAGGGCCTTTTTAACACATAATCCAAAATGGCGCAAAGCTGTTTTCATCTCACCATATAATAGTCAAAATTATGTTGCTCGGCGCCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCACAGGGTAGTGAGTATGATTACGTCATTTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACCATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCTAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGTTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTATAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGTTATCATACACTATTCTGCACACGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTCGGCTTTGACGTTGAAGGCGCACATGTCTGTGGTGATAATGTTGGAACTAACGTACCATTACAACTTGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGGTGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAATCACGAGCACCACCGGGTGAGCAATTTGCACACTTGATCCCGCTTATGAGAAAGGGTCAACCTTGGCACATCGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTATTTTGTTAAAATTGGGAGACCACAAAAATGTGAGTGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCCGTCTATGCTTGCTTTAAGCATGCATTGGGATGTGATTATTTATACAACCCTTATTGCATAGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGCTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCCTTTATTGACAATGAAGATAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAACCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAATAATGTTAGATGCCTGGACTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGACACTCGCACTCGTTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTTTTCTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGTAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAACTTTTGACACTTATATGCTTTGGCATGGTTTTGTTAATAGCAGAGCACTTCAGAGTTTAGAAAATGTGGCTTTTAACGTCGTTAAGAAAGGTGCCTTCACTGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACTAATGTAGCTTTTGAGTTGTATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAACTTAGGTGTTGTCGCAACATATAATTTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCTTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAGTTACAATATGGCTTTTTGAATGATTTACCTGTAAGTACTATTGGGAATAAACCTGTCACATGGTATATGTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATTCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCGAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTAAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACATTCTATCCACAACTCCAATCTTCTGAATGGAATCCAGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGACGGCATTACCACTAATGTCGTTAAGTATACTCAGTTGTGTCAATATCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATATGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCTGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATACGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAGAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGATACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAACTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAATACACCA >attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTATTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTCACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCTATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCTTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTGGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGCGATTTCGTGAAGACTGCTCCGGGTTTTGGTTGCGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTTACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACAATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAGGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACATTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAGTATTTTGAATGTTATGACGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGACAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATATCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCTACTGTGGTCATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGATGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTACCGCCTCTCCAATGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGGGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAACGTAAAATTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCGGATTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAACGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGGCCTGATGGAGACTACTATCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGACGCATACCCGCTCACAAAACACCCTAAGCCTGCTTATCAAAAAGTGTTTTACACTCTACTAGATTGGGTTAAACATCTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCGTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAGTCCACTGTCTTGCAAGCTGCAGGCATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAATGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCAGTCGGCTCAGAGGCTGTTGAAGATTTCAACAAACTTGCAGTTTCTGACTGGACTAATGTAGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAACAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGCACGAGTACTTACAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCATAATGTGAGTCCTCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAGGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATCCAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCTCATGCGGCTGTAGACGCTTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGATTGTTACACAGGCTTTAAGCCTAATAACACCAATGCGCAGTACTTGTTTTGTACTGTTAATGCTCTACCAGAAGCAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGCACTAATTATGATCTTAGTGTCATAAATAGCCGACTGAGTTACAAACATATTGTTTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCTGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAATTTGTACCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAACAAGCAACTAGAGGTTGTCAAGGCCTTTTTAGCACATAATCCAAAATGGCGTAAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCTCAGGGTAGTGAGTATGATTACGTCATCTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACTATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCAAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGCTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGCTATCACACACTATTCTGCACGCGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGGTTTGACGTTGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAATGTACCATTACAGCTGGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGATGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTGCACACTTGATTCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGATACTTTGTTAAAATTGGAAGACCACAAAAATGTGAATGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCTGTTTATGCTTGCTTCAAGCATGCATTAGGATGTGATTATTTATATAACCCTTACTGCATTGACATACAGCAATGGGGTTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCTTTTATTGACAATGAAGAAAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAATCCTGCTGCAATTCACGATGTGGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAACAATGTTAGATGTCTGGATTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGATACTCGCACTCGCTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTTTACTATGATGATAGTAATTGTGAACTTGTTGATGGGCAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAAACTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAATGTCGTTAAGAAAGGTGCCTTCACCGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAAATGTATTTTTACAAATAAGACTAGTTTACCTACAAATGTAGCTTTTGAGTTATATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAATTTAGGTGTTGTCGCAACATATAAGTTTGTGTTGTGGGATTATGAAGCTGAACGTCCTTTCTCAAATTTCACTAAGCAAGTGTGTTCCTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAATTACAATATGGCCTTTTGAATGATCTACCTGTAAGTACTGTTGGAAATAAACCTGTCACATGGTATATCTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTACTATACACAGGGACGTACTTTTGAAACCTTCAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTCTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGACTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGAATCCCGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCTGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATATGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAACACACCA >TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTCACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCTATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCTTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTGGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGCGATTTCGTGAAGACTGCTCCGGGTTTTGGTTGCGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTTACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACAATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACATTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAGTATTTTGAATGTTATGACGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGACAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATATCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCTACTGTGGTCATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGATGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTACCGCCTCTCCAATGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGGGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAACGTAAAATTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCGGATTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAACGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGGCCTGATGGAGACTACTATCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGACGCATACCCGCTCACAAAACACCCTAAGCCTGCTTATCAAAAAGTGTTTTACACTCTACTAGATTGGGTTAAACATCTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCGTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAGTCCACTGTCTTGCAAGCTGCAGGCATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAATGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCAGTCGGCTCAGAGGCTGTTGAAGATTTCAACAAACTTGCAGTTTCTGACTGGACTAATGTAGAAGACTACAGACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAACAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGCACGAGTACTTACAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCATAATGTGAGTCCTCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAGGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATCCAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCTCATGCGGCTGTAGACGCTTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGATTGTTACACAGGCTTTAAGCCTAATAACACCAATGCGCAGTACTTGTTTTGTACTGTTAATGCTCTACCAGAAGCAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGTACTAATTATGATCTTAGTGTCATAAATAGCCGACTGAGTTACAAACATATTGTTTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTTTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCTGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAATTTGTACCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAACAAGCAACTAGAGGTTGTCAAGGCCTTTTTAGCACATAATCCAAAATGGCGTAAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCTCAGGGTAGTGAGTATGATTACGTCATCTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACTATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCAAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGCTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGCTATCACACACTATTCTGCACGCGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGGTTTGACGTTGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAATGTACCATTACAGCTGGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGATGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTGCACACTTGATTCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGATACTTTGTTAAAATTGGAAGACCACAAAAATGTGAATGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCTGTTTATGCTTGCTTCAAGCATGCATTAGGATGTGATTATTTATATAACCCTTACTGCATTGACATACAGCAATGGGGTTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCTTTTATTGACAATGAAGAAAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAATCCTGCTGCAATTCACGATGTGGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAACAATGTTAGATGTCTGGATTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGATACTCGCACTCGCTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTTTACTATGATGATAGTAATTGTGAACTTGTTGATGGGCAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAAACTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAATGTCGTTAAGAAAGGTGCCTTCACCGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAAATGTATTTTTACAAATAAGACTAGTTTACCTACAAATGTAGCTTTTGAGTTATATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAATTTAGGTGTTGTCGCAACATATAAGTTTGTGTTGTGGGATTATGAAGCTGAACGTCCTTTCTCAAATTTCACTAAGCAAGTGTGTTCCTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAATTACAATATGGCCTTTTGAATGATCTACCTGTAAGTACTGTTGGAAATAAACCTGTCACATGGTATATCTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTACTATACACAGGGACGTACTTTTGAAACCTTCAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTCTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGAATCCCGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGGAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATATGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAACACACCA >WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTCACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCTATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCTTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTGGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGCGATTTCGTGAAGACTGCTCCGGGTTTTGGTTGCGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTTACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACAATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAGGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACATTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAGTATTTTGAATGTTATGACGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGACAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATATCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCTACTGTGGTCATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGATGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTACCGCCTCTCCAATGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGGGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAACGTAAAATTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCGGATTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAACGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGGCCTGATGGAGACTACTATCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGACGCATACCCGCTCACAAAACACCCTAAGCCTGCTTATCAAAAAGTGTTTTACACTCTACTAGATTGGGTTAAACATCTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCGTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAGTCCACTGTCTTGCAAGCTGCAGGCATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAATGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCAGTCGGCTCAGAGGCTGTTGAAGATTTCAACAAACTTGCAGTTTCTGACTGGACTAATGTAGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAACAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGCACGAGTACTTACAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCATAATGTGAGTCCTCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAGGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATCCAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCTCATGCGGCTGTAGACGCTTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGATTGTTACACAGGCTTTAAGCCTAATAACACCAATGCGCAGTACTTGTTTTGTACTGTTAATGCTCTACCAGAAGCAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGTACTAATTATGATCTTAGTGTCATAAATAGCCGACTGAGTTACAAACATATTGTTTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCTGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAATTTGTACCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAACAAGCAACTAGAGGTTGTCAAGGCCTTTTTAGCACATAATCCAAAATGGCGTAAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCTCAGGGTAGTGAGTATGATTACGTCATCTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACTATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCAAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGCTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGCTATCACACACTATTCTGCACGCGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGGTTTGACGTTGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAATGTACCATTACAGCTGGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGATGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTGCACACTTGATTCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGATACTTTGTTAAAATTGGAAGACCACAAAAATGTGAATGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCTGTTTATGCTTGCTTCAAGCATGCATTAGGATGTGATTATTTATATAACCCTTACTGCATTGACATACAGCAATGGGGTTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCTTTTATTGACAATGAAGAAAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAATCCTGCTGCAATTCACGATGTGGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAACAATGTTAGATGTCTGGATTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGATACTCGCACTCGCTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTTTACTATGATGATAGTAATTGTGAACTTGTTGATGGGCAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAAACTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAATGTCGTTAAGAAAGGTGCCTTCACCGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAAATGTATTTTTACAAATAAGACTAGTTTACCTACAAATGTAGCTTTTGAGTTATATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAATTTAGGTGTTGTCGCAACATATAAGTTTGTGTTGTGGGATTATGAAGCTGAACGTCCTTTCTCAAATTTCACTAAGCAAGTGTGTTCCTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAATTACAATATGGCCTTTTGAATGATCTACCTGTAAGTACTGTTGGAAATAAACCTGTCACATGGTATATCTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTACTATACACAGGGACGTACTTTTGAAACCTTCAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTCTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGAATCCCGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATATGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAACACACCA >TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTCAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACACGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTTGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCCATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTTGTGACAGTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAGGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATTCGATAGTTGAAAAAGGCTATATAGGTGTTATAACACTTGACAATCAAGACCTTAATGGCAATTTCTACGATTTCGGAGATTTCGTGAAGACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTCACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATCATTCATTGTGCCAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACCGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACGATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAGCACTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGATGGTGGGTGCATTAGTGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATATGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCACCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAACGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTCTGATGGGATGGGACTATCCAAAGTGTGACCGTGCTCTACCTAACATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTATCGCCTCTCCAATGAGTTAGCGCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTCCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTAGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAGCGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGACGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTCGTGTGCTACAACAAAGATTATGCTGACTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAATGTCTTCATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTACTACCTTCCCTATCCAGATCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGATGCATACCCACTTACAAAACATCCTAAGCCTGCTTATCAAAAAGTTTTTTATACTCTATTAGATTGGGTTAAACATTTACAGAAAAACTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCTACTGTCTTGCAAGCTGCAGGTATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAGTGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATTACGCCATATGTGTGTAGTTTTAGTGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTAGGTTCAGAGGCTGTTGAAGATTTTAACAAACTTGCAGTCTCTGACTGGACTAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGTACGAGTACTTATAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCACAACGTGAGTCCCCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATACAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCCCATGCTGCTGTAGACGCCTTATGTGAAAAAGCAGCCAAAAACTTCAATGTCGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGACTGTTATACTGGCTTTAAGCCGAATAACACTAATGCGCAGTACTTGTTTTGTACTGTCAATGCTCTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGCACTAATTATGATCTTAGTGTCATAAATAGCCGGCTGAGTTACAAACACATTGTCTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCCGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAACAAGTTTGTACCTGTCAACCCAGAATCAAAGCAATGCTTTAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAATAAGCAACTAGAGGTTGTCAAGGCCTTTTTAACACATAATCCAAAATGGCGCAAAGCTGTTTTCATCTCACCATATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATTTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACCATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCTAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGTTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGTTATCATACACTATTCTGCACACGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGCTTTGATGTTGAAGGCGCACATGTCTGTGGTGATAATGTTGGAACTAACGTACCATTACAACTTGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGGTGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAATCACGGGCACCACCGGGTGAGCAATTTGCACACTTGATCCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTATTTTGTTAAAATTGGAAGACCACAAAAATGTGAGTGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCCGTCTATGCTTGCTTTAAGCATGCACTAGGATGTGATTATTTATACAACCCTTATTGCATTGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCCTTTATTGACAATGAAGACAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAACCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAATAATGTTAGATGCCTGGACTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGACACTCGCACTCGTTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTCTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGTAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAACCTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAGAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAACGTCGTTAAGAAAGGTGCCTTCACTGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACTAATGTAGCTTTTGAGTTGTATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAACTTAGGTGTTGTCGCAACATATAATTTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCTTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCATTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAGTTACAATATGGCTTTTTGAATGATCTACCTGTAAGTACTGTTGGGAATAAACCTGTCACATGGTATATATATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACTTTTGAAACCTTTAAGCCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATTCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCGAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTAAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACATTCTATCCACAACTCCAATCTTCTGAATGGAATCCAGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACCATTAATGTCGTTAAGTATACTCAGTTGTGTCAATATCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCTGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATACGACGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAGTTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGATACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAATACACCA >TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTCAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACACGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTTGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCCATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTTGTGACATTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAGGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATTCGATAGTTGAAAAAGGCTATATAGGTGTTATAACACTTGACAATCAAGACCTTAATGGCAATTTCTACGATTTCGGAGATTTCGTGAAGACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTCACTGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATCATTCATTGTGCCAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACCGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACGATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAGCACTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGATGGTGGGTGCATTAGTGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATATGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCACCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAACGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGATAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTCTGATGGGATGGGACTATCCAAAGTGTGACCGTGCTCTACCTAACATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTATCGCCTCTCCAATGAGTTAGCGCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTCCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTAGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAGCGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGACGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTCGTGTGCTACAACAAAGATTATGCTGACTTAGGTTATGTGGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAATGTCTTCATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCAGATGGAGACTACTACCTTCCCTATCCAGATCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAGCGTTACGTGTCATTGGCTATTGATGCATACCCACTTACAAAACATCCTAAGCCTGCTTATCAAAAAGTTTTTTATACTCTATTAGATTGGGTTAAACATTTACAGAAAAACTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCTACTGTCTTGCAAGCTGCAGGTATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAGTGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATTACGCCATATGTGTGTAGTTTTAGTGGTTGTAACGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTAGGTTCAGAGGCTGTTGAAGATTTTAACAAACTTGCAGTCTCTGACTGGACCAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTGTCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGATTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGTACGAGTACTTATAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCACAACGTGAGTCCCCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATACAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCCCATGCTGCTGTAGACGCCTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGACTGTTATACTGGCTTTAAGCCGAATAACACTAATGCGCAGTACTTGTTTTGTACTGTCAATGCTTTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGCACTAATTATGATCTTAGTGTCATAAATAGCCGGCTGAGTTACAAACACATTGTCTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCCGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAGTTTGTACCTGTCAACCCAGAATCAAAGCAATGCTTTAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAATAAGCAACTAGAGGTTGTCAAGGCCTTTTTAACACATAATCCAAAATGGCGCAAAGCTGTTTTCATCTCACCATATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATTTACACACAGACCTCTGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACCATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCTAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGTTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGTTATCATACACTATTCTGCACACGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGCTTTGATGTTGAAGGCGCACATGTCTGTGGTGATAATGTTGGAACTAACGTACCATTACAACTTGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGGTGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAATCACGGGCACCACCGGGTGAGCAATTTGCACACTTGATCCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGATCTGTGACTATTTTGATGGCTTATCAGACATTCTAATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTATTTTGTTAAAATTGGAAGACCACAAAAATGTGAGTGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCCGTCTATGCTTGCTTTAAGCATGCACTAGGATGTGATTATTTATACAACCCTTATTGCATTGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTTAAACGTGTTGATTGGTCAATTGTGTACCCCTTTATTGACAATGAAGACAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAACCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAATAATGTTAGATGCCTGGACTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGACACTCGCACTCGTTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCACGCTTTCCACACACCAGCTTACGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTCTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGTAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAACTTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAGAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAACGTCGTTAAGAAAGGTGCCTTCACTGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGATAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACTAATGTAGCTTTTGAGTTGTATGCAAAACGTAAACTTGGACTCACACCTCCATTAACAATACTTAGGAACTTAGGTGTTGTCGCAACATATAAGTTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCTTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCATTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAGTTACAATATGGCTTTTTGAATGATCTACCTGTAAGTACTGTTGGGAATAAACCTGTCACATGGTATATATATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACTTTTGAAACCTTTAAGCCTCGTAGTACAATGGAGGAAGATTTTCTTAGTATGGATACTACACTCTTCATTCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCGAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTAAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACATTCTATCCACAACTCCAATCTTCTGAATGGAATCCAGGTTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGCGAAATTACCTGATGGCATTACCATTAATGTCGTTAAGTATACTCAGTTGTGTCAATATCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCTGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATACGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACTGAGTTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGATACTCCTAAATTTAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAATACACCA >partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGACGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCTATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTGGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGAGACTTCGTGAAGACTGCTCCAGGTTTTGGTTGCGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTTACCGAACATAAGGAGCACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACGATGAAGTTGAGTATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACACTTTTTCTTCGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCACGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGACGGTGGGTGCATTAGTGCTCGCGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTACCGCCTCTCCAATGAGTTAGCGCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAACGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCGGATTTAGGTTATGTAGCTGACATTAATGCCTTTAAAGCAACACTTTATTACCAGAATAACGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTATTATCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGACGCATACCCACTTACAAAACACCCTAAGCCTGCTTATCAGAAAGTGTTTTATACTCTACTAGATTGGGTTAAACATTTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCCACTGTCTTGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTATTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGACGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCTATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTGGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGAGACTTCGTGAAGACTGCTCCAGGTTTTGGTTGCGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTTACTGAACATAAGGAGCACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACGATGAAGTTGAGTATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACACTTTTTCTTCGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCACGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGACGGTGGGTGCATTAGTGCTCGCGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTACCGCCTCTCCAATGAGTTAGCGCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAACGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCGGATTTAGGTTATGTAGCTGACATTAATGCCTTTAAAGCAACACTTTATTACCAGAATAACGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTATTATCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGACGCATACCCACTTACAAAACACCCTAAGCCTGCTTATCAGAAAGTGTTTTATACTCTACTAGATTGGGTTAAACATTTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCCACTGTCTTGCAAGCTGCAGGCATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAATGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTCGGTTCAGAGGCTGTTGAAGATTTTAACAAACTCGCAGTTTCTGACTGGACTAATGTAGAAGACTACAAACTTGCAAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGCACGAGTACTTATAAATTGACACCAGGTATGATCTTTGTGTTGACTTCTCATAATGTGAGTCCTCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATCCAAGGCCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCTAGAATAGTCTACACTGCATGTTCTCATGCGGCTGTAGACGCTTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGATTGTTACACTGGCTTCAAGCCTAATAACACCAATGCGCAGTACTTGTTTTGTACTGTCAATGCTCTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGTACTAATTATGATCTTAGTGTCATAAATAGCCGACTGAGTTACAAACACATTGTTTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCCGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAATTTGTACCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAACAAGCAACTAGAGGTTGTCAAGGCCTTTTTAGCACATAATCCAAAATGGCGTAAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTACTTGGTTTGCAAACGCAAACCGTGGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATCTACACACAGACCTCCGATACACAGCATTCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACTATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCGAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGCTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGCTATCACACACTATTCTGCACGCGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGGTTTGACGTTGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAATGTACCATTACAGCTGGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGATGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTGCACACTTGATTCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTACTTTGTTAAAATTGGAAGACCACAAAAATGTGAATGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCTGTTTATGCTTGCTTCAAGCATGCATTAGGATGTGATTATTTATATAACCCTTACTGCATTGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCTTTTATTGACAATGAAGAAAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAATCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATTCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAACAATGTTAGATGTCTGGATTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGATACTCGCACTCGCTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTCAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTACGCCATTCTTTTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAAACTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAATGTCGTTAAGAAAGGTGCCTTCACCGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACAAATGTAGCTTTTGAGTTATATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAATTTAGGTGTTGTCGCAACATATAATTTTGTGTTGTGGGATTATGAAGCTGAACGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCCTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAATTACAATATGGCCTTTTGAATGATCTACCTGTAAGTACTGTTGGAAATAAACCTGTCACATGGTATATCTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACCTTTGAAACCTTCAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTCGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTCTCTAAAACTACCATCGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCTGTTCAAGAATTTATGAATAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGAACCCCGGTTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGATAAGTTTGATTTGCTCGTTTCTGATTTATATGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAACACACCA >65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 ATGAGTTCCAAACAATTTAAGATCCTCGTTAATGAGGACTACCAAGTCAACGTGCCTAGTCTTCCTTTCCGTAACGCTTTGCAGGAAATTAAGTACTGCTACCGTAACGGTTTTGAGGGCTATGTTTTCGTACCTGAATACCGTCGTGACCTAGTTGATTGCGATCGTAAGGATCACTACGTCATTGGTGTTCTGGGTAACGGAATAAGTGATCTTAAACCTGTTCTCCTTACCGAACCTTCCGTCATGTTGCAAGGCTTTATTGTTAGAGCTGGCTGCAATGGCGTTCTTGAGGACTTTGACCTTAAAATCGCCCGTACTGGAAATGGCGCCATATATGTAGATCAATACATGTGTGGTGCAGATGGAAAACCAGTTATTGAAGGTGAGTTTAAGGATTATTTCGGTGATGAGGACGTTATCATCTATGAAGGAGAGGAGTACCATTGTGCCTGGCTAACAGTGCGCGATGAAAAACCTTTATGTCAACAAAATCTCCTCACAATTAGGGAAATCCAATACAATCTGGACATCCCACATAAGTTGCCTAATTGTGCTATCAGAGAGGTAGCACCACCAGTCAAGAAGAATTCCAAGGTTGTTCTTTCTGAAGAGTATAAAAAGCTCTATGACATCTTTGGTTCACCATTTATGGGCAATGGGGACAGTCTTAACAAGTGTTTTGACAGCCTCCACTTCGTTGCTGCCACTCTTAAGTGTCCTTGTGGCGCCGAGAGTAGTGGTGTTGGTGATTGGACTGGTTTTAAGACTGCTTGTTGTGGTCTTCAAGGCAAAGTTAAAGGCGTCACATTAGGTGCTGTTAAACCAGGTGATGCCGTTGTCACTAGCATGAGTGCAGGTAAGGGTGTAAAATTCTTTGCTAATAGTGTACTCCAATATGCTGGTGATGTGGAAAATGTCTCTGTTTGGAAAGTGATTAAAACTTTCACTGTTAATGAGACTGTCTGCACCGCTGATTTTGAAGGCGAATTGAACGACTTCATTAAACCAGAGAGTACTTCACCTGTTTCATGTTCTATTAAGAGAGCGTTCATCACTGGTGAGGTTGATGATGCAGTCCATGACTGTATTATCTCAGGAAAGTTGGACCTTAGTACTAACCTTTTTGGTGGTGCTAACCTGCTTTTCAAGAAAACGCCCTGGTTTGTGTTAAAGTGTGGTGCTATTTTTGCTGATGCTTGGAAAGTTGTTGAAGAACTGCTTTGTTCTCTCAAACTTACATACAAGCAAATCTATGATGTAGTAGCATCACTTTGCACTTCTGCCTTTACTATTATGGATTACAAACCTGTATTTGTAGTTGCATCTAATAGTGTTAAGGATCTCGTTGACAAGTGTGTCAAAATTCTTGTGAAAGCCTTTGATGTTTTCACACAGACAATTACCATTGCGGGTGTGGAGGCTAAGTGCTTTGTGCTTGGCTCTAAATACTTGCTTTTTAATAATGCACTTGTTAAGCTTGTCAGCGTTAAAATACTTGGCAAGAGGCAGAAAGGTCTTGATAGTGCATTCTTTGCCACTAATTTGATTGGTGCTACTGTTAAGGTGACACCACAAAGAACTGAGGCAGCCAATATTAGTTTGAATAAAGTAGATGATGTTGTCACACCTGGTGAAGGTCATATTGTCATTGTAGGCGACATGGCTTTTTACAAGAGTGAAGAGTACTACTTTATGATGGCAAGTCCTGATTCAGTTCTCATTAATAACGTTTTTAAAGCAGCTCGAGTGCCATCTTATAACATTGTTTACAATGTGGATGATGATACCAAGAGTAAGATGTCATCTAAAATTGGAACGCCATTTGAATTTGATGGTGATGTGGATGCTGCTATTGTTAAGATTAACGACTTACTTGTTGAGTTTAGACAAGAAAAGTTTTGTTTCAGAGCACTTAAGGATGGTGAAAGTATCTTGGTTGAGGCATACCTTAAGAAATATAAAATGCCAATTTGTCTCAAAAATCATGTTGGTTTATGGGACATCATAAGACGCGATTCTGATAAGAAGGGTTTTCTTGACACTTTCAGTCATCTTAATGAATTGGAGGATGTCAAGGATGTAAAAATTCAGTCTATTAAAAATATCCTTTGCCCTGACCTTCTGTTAGAATTAGATTTTGGTGCAATTTGGTATAGATGTATGCCAGCCTGCTCTGATGTGTCTATTTTGGGTAATGTTAAAATCATGCTAGGTAATGGTGTTAAAGTGATTTGTGATGGCTGCCATGGTTTTGCTAACCGTTTAACGGTTAATTACAGCAAACTGTGTGACACAGCTCGTAAAGACATTGAAATTGGTGGTATACCATTTTCCACCTTTAAAACACCATCTAGCAGCTTCATTGACATGAAAGATGCCATCTATTCTGTGGTTGAATACGGTGAAGCATTTTCCTTTAAGACTGCAAGTGTACCTGTAACTAATAGTGGTACTGTCAAAAATGACGACTGGTCAGACCCCATTTTGTTAGAACCTGCAGATTATGTCGAACCTAAAGATAACGGTGATGTAATTGTCATTGCTGGATACACCTTTTACAGGGATGAGAACGATCACTTTTATCCATATGGTTCCGGCATGGTTGTGCAGAAGATGTACAACAAGATGGGTGGTGGTGACAAGTCAGTTTCATTTTCAGACAACGTTAATGTTAAAGAGATAGAACCTATTACACGTGTCATGCTAGAATTTGAATTTGACAATGAGGTGGTAACACAGGTTCTTGAAAAAGTCATTGGTGCCAAATATAAGTTTACAGGTACCACTTGGGAAGAATTTGAAGATTCTATTTCTGAGAAACTTGACAAGGTTTTCGACGCGCTTGCTGAACAGGGTGTAGAACTTGAAGGTTACTTCATTTATGACACTTGTGGCGGATTTGACATTAATAATCCAGATGGTGTTATGATTTCACAGTATGATCTTAACTCAGCTGTTGATGTCAGAAGTGATTCTGATGCAAGCGTGGAAGACACATCTTCGATTTCTGATAACGAAGATGTTGAACAAATAGAAAAAGAGAACGTCTCAGCTGCTGATGTTACAGTTGTAGATGTTGAAGAATTTGTTGAGCAAGTTTCTCTTGTTGACACCGAAGAACAACTCCCCTCAGTAGAGGAAAAAGTTGAAGGCTCTGCTAAAGATGACCCGTGGGCTGCTGCTGTTGATGAACAGGAAGCTGAACAACCTAAACCTTCCTTAACTCCATTTAAGACAACAAATCTTAATGGTAGAATTATTCTTAAACAACAAGATAACAATTGTTGGATAAACGCTTGCTGTTACCAGTTGCAAGCTTTTGACTTTTTCAACCATGAATTATGGGATGGTTTTAAGAAAGATGACGTTATGCCTTTCGTAAACTTCTGTTATGCAGCTCTAACTTTGAAGCAGGGTGATTCAGGAGACTCAGAATACCTTTTGGAGACGATGCTCAATGATTATAGTACAGCTAAAGTTGTTCTTAGTGCTAAGTGTGGCTGTGGTGTTAAAGAAATAGTTTTAGAGCGAACTGTGTTTAAGCTCACACCTCTTAAGAATGAGTTTAAATATGGTGTCTGTGGTGACTGTAAACAAATTAACATGTGTAAGTTTGCAAGCGTGGAAGGTTCAGGTGTTTTTGTTCATGATAGA---ATTGAAAAACGAACACCTGTGTCACAATTCATTGTGACACCTATTATGCACGCAGTTTACACAGGTACAACACAGAGTGGTCATTACATGATTGAGGATTGCACTCATGATTATTGTGTGGATGGTATGGGAGTTAAACCCCGTAAACAAAAGTTTTACACATCCACCTTGTTTCTTAATGCAAATGTAATGACA---------------------------------------GCTGACTCTAAAACTACAATCGAACCAACTGCACCTGTTAAGGATAAGCTTGTAGAAGAATGTCAAAGTCCTAAAGACTTTATATTACCCTTTTACACAGCGGGGAAAGTGTCATTTTACCAAGGAGATTTGGATGTTTTGATTAACCTTCTTGAACCTGACGTTGTTGTTAACGCTGCTAATGGTGATCTTAGGCACATGGGTGGTGTTGCTAAAGCCATTGATGTGTTCACAGGTGGTAAGTTGACGAAACGTTCTAAAGAATATCTTAGGACTAATAAAACAATAGCTCCTGGTAATGCTGTGCTTTTTGAAAACGTACTTGAGCATCTTAGTGTATTGAATGCTGTCGGACCACGTAATGGTGACAGTAGAGTTGAAGGTAAACTCTGTAACGTTTACAAAGCAATTGCCAAGTGTGACGGTAAGATATTAACACCACTTATTAGTGTTGGTATCTTCAAAGTCAAACTGGAAGTTTCATTGCAGTGTCTACTTAAAACTGTCACAGATAGGGAATTAAATGTCTTTGTTTACACTGACCAAGAGAGAATTACCATAGAAAATTTCTTCAATGGTACTATTCCTGTCAAGGTAACGGAAGACACTGTGAATCAAAAGCGTGTGTCTGTGGCACTTGATAAAACTTATGGTGAGCAACTCAAAGGCACTGTTGTTATTAAAGACAAAGATGTTACTAACCAGTTGCCAAGTGTGTCAGATGTTGGTGAAAAAGTCGTTAAGGCATTGGATGTTGATTGGAATGCTTACTATGGCTTTTCAAATGCAGCGGCTTTTAGTGCCAGTTCCCATGATGCTTATATATTTGAAGTTGTAACACACAACAACTTCATTGTTCATAAGCAGACTGATAATAATTGTTGGGTTAATGCAATTTGTTTAGCATTACAAAGGCTTAAACCAACATGGAAGTTTCCTGGTGTTAAAAGTTTGTGGGATGATTTTCTTGTTCGTAAAACTGCTGGATTTGTCCACATGCTATACCACATTTCAGGCTTAAAGAAAGGACAACCTGGTGATGCTGAGTTGACTTTACATAAGCTTGGTGAGTTGATGTTGAGTGATAGTGCTGTCACCATCACACATACAACTGCATGTGACAAGTGTGCAAAAACTGAAACTTTTACAGGCCCTGTGATAGCAGCACCTCTTCTGATCCATGGCACTGATGAAACCTGTGTTCATGGTGTAAGTGTTAATGTTAAAGTGACAAGTGTTAGAGGCACTGTGGTTATCACTTCCTTAATCGGTCCTGTTGTAGGAGATGTTATTGATGCAACTGGTTATATTTGTTATACTGGATTGAACTCACGTGGTCATTATACCTATTATGATAATCTTAATAGTTTATTGGTTGATGCTGAAAAGGCCTATCATTTTGAGAAAAACCTCTTACAGGTTACAACAGCCATTGCTAGTAATTTTATTGCCTACACACCTAAGAGTGAGATCTATCCTAAGGTTCAACCAGTTAAAGAATCACATACAGCTCGTGTTTTTAGTGAGGTTGAAGAAATTCCTAAAAATGTAGTTCGTGAAACAAAATTGCTAGCTATTGAGAGTGGTGCAGATTACACACTCTCAACACTTGGTAAATATGCTGATGTTTTCTTTATGACCGGTGATAAAATTCTTAGGTTTCTCCTTGAAGTCTTTAAATATTTATTGGTTGTTTTTATGTGTCTTAGAAAATCTAAGATGCCTAAAGTTAAGGTAAAACCACCGCATGTATTCAAAAACTTAGGTGCTAAAGTTAGGACATTGAATTACGTAAGACAATTGAACAAACCAGCGTTATGGCGTTACGTAAAACTAGTGTTACTTTTAATAGCATTGTACCACTTTTTCTACTTGTTTGTTAGTATACCAGTAATGCACAAATTAGTGTGTAGTAGTAGTGTACAAGCGTATAGTAATTCTAGTTTTGTGAAATCAGAAGTTTGTGGTAATTCTATTCTATGCAAGGCGTGTCTGGCATCTTATGATGAATTGGCTGATTTTGATCATCTTCAGGTGTCATGGGATTATAAGTCGGATCCGCTATGGAATAGAGTTATACAATTGTCTTACTTCACATTCTTGGTTGTTTTTGGCAATAATTATGTTAGATGTCTTCTTATGTATTTTATCTCTCAGTACCTTAACTTGTGGTTGTCTTATTTTGGTTATGTTAAGTATAGTTGGTTTTTGCATGTCATCAACTTTGAATCAATTTCTGTTGAATTTGTGATCATAGTTGTAGTTTTTAAGGCAGTTCTCGCACTTAAACACATCTTCTTTTCATGCAATAACCCATCATGTAAGACTTGTTCTAAGATTGCTAGGCAGACACGTATTCCTATACAAGTTGTGGTTAATGGTTCAATGAAGACTGTGTATGTCCACGCTAATGGTACTGGTAAACTCTGCAAAAAGCATAATTTCTACTGTAAAAATTGTGACTCTTACGGTTTTGACCACACATTCATCTGTGACGAGATTGTGCGTGACCTGGGTAACAGTATCAAGCAAACTGTTTATGCCACTGATAGATCATACCAGGAAGTCACAAAGGTTGAATGCTCTGATGGCTTTTACAGGTTTTATGTTGGTGATGAATTCACGGCATACGACTATGATGTAAAAAACAAGAAGTATAGTAGCCAGGAAGTGCTTAAAACTATGTTCCTGCTTGATGACTTCATCGTCTATAGTCCATCAGGGTCTTCCCTCGCTAGTGTTAGAAATGTCTGTGTTTATTTTTCACAACTGATTGGTAGGCCTATTAAAATTGTTAATAGTGAACTTCTTGAGGATTTATCTGTAGACTTTAAGGGAGCACTTTTTAATGCTAAGAAAAATGTTATTAAAAACTCTTTTAATGTTGATGTGTCAGAATGTAAAAACCTTGAAGAGTGTTATAAAGCATGCAACCTTGATGTGACATTTTCTACTTTTGAAATGGCTGTTAATAACGCTCATAGATTTGGTATATTGATTACAGACCGCTCCTTTAACAATTTTTGGCCATCAAAAATTAAGCCAGGTTCTTCTGGTGTCTCTGCTATGGACATTGGTAAGTGCATGACTTTTGATGCAAAGATTGTTAATGCAAAGGTTTTAACGCAACGAGGTAAAAGTGTTGTATGGCTTAGTCAGGACTTTTCTACTCTTAGTTCTACAGCACAGAAAGTTTTAGTTAAAACTTTTGTAGAAGAAGGTGTGAACTTTTCACTAACGTTTAATGCTGTGGGTTCAGATGAAGACCTCCCCTATGAGAGATTCACTGAATCAGTTTCACCAAAGAAAGGTTCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAGATCTTCTGGTGTTTGGTTTTGTTTATTACCTTGTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGATGGTTATGAATACATGGTTATTAAGAATGGCATTGTTCAACCATTTGATGATTCTATTAACTGTGTACATAACACATACAAAGGCTTTGTTATGTGGTTTAAAGCTAAATATGGTTTTGTACCTACATTCGACAAGTCTTGTCCTATTGTTTTAGGAACTGTTTTTGACTTAGGCAATATGAGACCAATCCCTGATGTGCCAGCTTATGTAGCACTTGTTGGTAGATCCCTAGTGTTTGCGATTAATGCAGCATTTGGTGTTACTAATGTTTGTTATGATCATACAGGTTCTGCTGTGAGTAAAAACTCTTATTTTGATACCTGTGTATTTAATGCTGCTTGCACCACTCTATCAGGCCTTGGAGGTACAATTGTTTATTGTGCCAAACAAGGACTTGTGGATGGTGCTAAACTTTATAGCGAATTGATGCCTGACTATTTTTATGAGCACGCTAGTGGTAACATGGTTAAAATACCAGCCATTATTAGGGGTTTTGGTCTGAGATTCGTAAAAACACAGGCTACAACTTATTGCAGAGTAGGGGAGTGTGTTGAAAGTCAGGCCGGTTTTTGCTTTGGTGGTGACAACTGGTTTGTTTATGATAAAGAGTTTGGTGATGGTTATATTTGTGGAAGCTCTACATTGGGTTTTCTCAAAAATGTCTTTGCTCTCTTTAACTCTAACATGTCTGTAGTAGCCACATCCGGTGCTATGTTGGTTAACATTATCATCGCATGTTTGGCTATAGCGGTCTGTTATGGTGTTCTTAAATTTAAGAAAATCTTTGGTGATTGTACTCTCCTAGTTGTTATGATTATTGTTACATTGGTTGTTAACAATGTTTCTTATTTTGTGACCCAAAACACATTCTTTATGATTGTTTATGCCATTATTTATTACTTTACAACAAGGAAATTATCATACCCTGGTATCTTGGATGCAGGATTCATTATTGCCTATGTGAACATGGCCCCATGGTATGTGCTTGTGCTGTACATAGTGGTCTTCTTATATGATTCTCTACCCTCACTATTCAAACTTAAGGTTACAACAAACCTTTTTGAAGGGGATAAATTTGTTGGTAGTTTTGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAGACACTTGTTAATTCTACATCCTTGGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTACAAGTACTATACTGGTTCAATGGGAGAGGCCGATTACCGCATGGCTTGTTATGCTCATTTAGGTAAGGCATTAATGGATTATTCTGTCTCAAGAAATGATGTTCTTTACACACCACCAACGGTCAGTGTTAATTCAACATTACAGTCAGGACTGAGAAAAATGGCACAGCCTAGTGGTATTGTGGAACCCTGCATTGTGAGGGTAGCCTATGGCAATAATGTGCTTAATGGTTTGTGGCTTGGAGATGAAGTTATCTGCCCTAGACACGTCATTGCAAGTGACACATCACGTGTGATCAATTATGACAATGAGTTGTCCGGTGTGCGGTTACATAAATTCTCTATAGCCAAAAATAATGTGTTTTTGGGCGTTGTGTCTGCCAAGTATAAGGGTGTGAACCTTGTGCTTAAGGTTAATCAGGTAAACCCCAACACACCAGAACACAAATTCAAATCCGTGAAGTCTGGTGAGAGTTTTAACATTCTCGCTTGTTATGAAGGCTGTCCCGGTAGTGTCTACGGTGTGAACATGAGAAGTCAGGGTACCATCAAAGGTTCATTTATTGCTGGTACCTGTGGGTCAGTAGGTTATGTATTAGAAAATGGAATACTCTATTTTGTGTACATGCACCACTTAGAATTAGGTAATGGCTCTCATGTTGGTTCAAACCTTGAGGGGGTAATGTATGGCGGTTATGAAGATCAACCTAGCATGCAATTGGAGGGTACTAACGTCATGTCATCAGATAATGTAGTTGCATTTTTGTATGCTGCTCTTATTAATGGTGAAAGATGGTTTGTTACAAATGCATCAATGACGTTAGAATCTTACAATGTATGGGCCAAAACCAACAGTTTTACGGAACTTGTTTCAACTGATGCTTTTAATATGTTGGCTGCAAAAACTGGTTATAGTGTTGAGAAGTTGCTTGAATGTATTGTTAGACTCAACAAAGGTTTTGGAGGACGCACTATACTCTCTTATGGTTCATTGTGTGATGAATTCACACCTACGGAAGTTATAAGGCAAATGTATGGTGTTAATCTTCAGAGTGGTAAAGTGAAATCTCTCTTTTACCCTGTGTTGACAGCCATGGCTATTCTATTTGCTTTTTGGTTAGAGTTCTTTATGTACACACCCTTTACATGGATTAATCCATCGTTTATCAGTGTTATTCTAGCTATTACAACTTTTTTCTCTGTGTTATTAGTTGTTGGGATTAAACACAAAATGTTATTCTTTATGTCTTTTGTAATGCCTAGTGTTGTGTTGGCCACCGTTCATAATGTTGTATGGGATATGACTTATTATGAAAGCTTACAAGCTCTTGTGGCGAACACTAACACAACATTTTTACCAGTAGATATGCAAGGCGTTATGCTTGCTTTGTTCTGTGTTGTTGTGTTTGTTACATACACTATAAGATTCTTTACATGCAAGCAATCCTGGTTTTCTTTATTTGTAACAACTGTCTTTGTGGTGTTCAACATTGTTAAGTTGCTAGGCATGGTAGGTGAACCATGGACTGAAGATCACATCTTGTTATGTCTTGTAAACATGCTTACCATGTTGATAAGTCTTACTACAAAGGACTGGTTTGTTGTTTTTGTATCATACAAATTTGCTTATTATGTCGTTGTTTATGTAATGCAACCATCCTTTGTTCAAGACTTTGGGTTTATTAAGTGTGTAAGCGTGATTTACATGGCATGTGGTTATTTGTTTTGCTGTTATTATGGTATTCTTTACTGGGTTAACAGATTTACATGCATGACGTGTGGTGTTTACCAATTCACTGTCTCACCGGCAGAGCTCAAGTATATGACTGCTAACAATTTGTCAGCACCTAAGACCGCATATGATGCCATGATTCTTAGTGTTAAATTGATGGGTATAGGTGGAGAGAGAAATATAAAAATCTCCACTGTACAGTCTAAACTCACAGAGATGAAATGCACAAACGTTGTGCTGCTTGGGCTTTTGTCTAAAATGCATGTTGAATCTAACTCAAAGGAGTGGAATTATTGTGTTGGGCTGCATAATGAGATTAATTTGTGTGATGACCCCGAAGTGGTTCTTGAAAAACTACTTGCACTCATCGCATTCTTTTTATCCAAACACAATACATGTGATCTTAGTGACCTTATCGACTCCTATTTTGATAACACCACTATTTTACAGAGTGTGGCTTCTGCTTATGCTGCTTTACCTAGCTGGATTGCATATGAAAAAGCTCGCGCGGATTTAGAAGAGGCTAAGAAAAATGATGTTAGTCCACAATTATTGAAACAGCTTACAAAAGCATGCAATATTGCTAAGAGTGAGTTTGAACGCGAGTCCTCGGTTCAAAAGAAGCTTGATAAAATGGCCGAGCAAGCTGCAGCTAGTATGTACAAAGAGGCAAGGGCTGTTGACAGAAAATCAAAAATAGTTTCTGCTATGCATAGTCTTCTTTTTGGTATGCTCAAGAAACTTGATATGTCCAGTGTTAATACTATTATTGAACAGGCCCGTAATGGTGTGTTGCCCCTGAGTATCATACCTGCTGCAGCAGCCACAAGACTTATTGTTGTAACACCTAATATTGAAGTGCTTTCCAAAATTAGGCAAGAAAACAATGTCCACTATGCAGGTGCTATCTGGTCAATTATTGAAGTCAAGGATGCTAATGGTGCTCAAGTCCATTTAAAAGAAGTCACAGCTGCCAATGAGTTGAACCTGACCTGGCCTTTGAGTATTACATGTGAGAGAACCACAAAGTTGCAAAACAATGAAATTATGCCAGGTAAACTTAAAGAGAAGGCTGTTAAAGCGTCTGCTACAATTGATGGTGATGCTTATGGTAGTGGTAAGGCCCTCATGGCTTCTGAAAGTGGTAAGAGCTTTATATATGCATTTATAGCGTCTGACAGCAACCTTAAGTATGTTAAATGGGAGAGCAATAATGATGTAATACCCATTGAACTTGAGGCCCCATTGCGCTTTTATGTAGATGGTGCTAATGGCCCTGAAGTTAAGTATCTTTACTTTGTGAAGAACTTGAACACTCTTAGACGTGGTGCTGTTCTGGGTTATATTGGCGCTACTGTTCGTTTGCAGGCTGGTAAACCTACTGAACACCCATCTAACAGTGGTTTATTAACCTTGTGTGCTTTCGCTCCTGACCCTGCTAAGGCATACGTTGATGCTGTTAAGAGAGGTATGCAGCCAGTTACTAATTGTGTGAAAATGCTCTCAAATGGTGCTGGTAATGGTATGGCTATTACAAATGGTGTAGAGTCTAATACGCACCAAGACTCTTATGGTGGTGCATCTGTGTGCATCTATTGTAGGTGTCATGTAGAACATCCTGCAATTGATGGATTGTGTCGTTATAAGGGTAAATTTGTTCAAGTACCAACCGGCACTCAAGATCCTATTAGATTTTGTATTGAAAATGAAGTCTGTGTTGTTTGTGGTTGCTGGCTTAATAATGGTTGCATGTGTGATCGTACTTCTATGCAAGGCACAACTGTTGACCAGAGTTATTTAAACCGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCACGTTAGTAGAGCTTTTGACATCTATAATAAAGATGTTGCATGTATTGGTAAATTCCTTAAGACTAATTGTTCCCGTTTTAGGAATTTGGACAAACGTGATGCCTACTATGTTGTCAAGCGTTGTACTAAGAGCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCAGTTGCTGAACATGACTTCTTTTTGTATAAGGAAGGTCGATGTGAATTCGGCAACGTCGCACGTAAGGATCTTACAAAGTACACTATGATGGATCTATGTTATGCCATTAGGAATTTTGATGAAAAGAATTGCGAAGTTCTTAAAGAAATACTCGTGACATTAGGTGCCTGCAATGAATCCTTCTTTGAAAATAAAGATTGGTTTGACCCAGTGGAAAATGAAGCTATACATGAGGTGTACGCAAGACTTGGACCTATAGTAGCCAACGCTATGCTTAAATGTGTAGCGTTTTGTGATGCTATCGTGGAGAAAGGTTACATAGGTATTATTACACTTGATAACCAAGACCTTAATGGTAATTTTTACGACTTCGGTGATTTCGTAAAGACAGCGCCTGGTTTTGGATGTGCTTGCGTGACGTCATATTATTCTTATATGATGCCCTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAATTTTGTGAAAAGTGACATTTATGGTTCTGATTATAAGCAGTATGATTTGCTAGCTTATGATTTTACAGACCATAAAGAAAAGCTGTTCGAAAAATATTTCAAACACTGGGACCGCACATACCATCCTAACTGCTCTGATTGTACAAGTGATGATTGTATCATTCATTGTGCTAATTTTAACACATTGTTTTCAATGACCATACCCAACACTGCTTTTGGACCTCTTGTACGTAAAGTCCACATAGATGGTGTGCCAGTTGTTGTTACTGCTGGTTACCATTTTAAACAGTTGGGTATTGTGTGGAATCTTGATGTTAAATTAGACACTATGAAGTTGACTATGACAGATCTTCTTAGGTTCGTCACTGACCCTACATTACTTGTAGCATCAAGCCCTGCATTGTTAGATCAGCGCACTGTCTGTTTTTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTGAAACCAGGTCACTTTAACAAGGATTTCTACGATTTTATAACAGAGCGTGGATTCTTTGAGGAGGGATCTGAGTTGACGTTGAAACATTTCTTCTTTGCACAGGGTGGTGAAGCCGCTATGACAGATTTTAACTACTACCGTTATAACAGAGTTACTGTTTTAGACATCTGTCAGGCGCAATTTGTTTATAAAATTGTGTGTAAGTACTTTGATTGTTACGATGGTGGCTGCATCAATGCTCGAGAGGTTGTTGTTACCAACTACGACAAGAGTGCTGGTTATCCACTTAATAAATTTGGTAAGGCAAGACTTTACTATGAGACTCTGTCATATGAGGAGCAGGATGCGATTTTTGCATTAACAAAGAGAAATGTTCTACCCACAATGACACAAATGAATTTGAAATATGCTATATCTGGAAAGGCTAGAGCTCGCACTGTAGGAGGAGTGTCACTCCTTTCGACAATGACTACGAGACAATACCACCAGAAGCATTTAAAGTCTATTGCTGCTACACGTAATGCCACTGTTGTTATTGGAACGACTAAGTTCTACGGTGGCTGGGATAATATGTTAAAGAATTTGATGCGTGATGTAGATAACGGCTGTTTGATGGGATGGGACTATCCAAAGTGCGACCGTGCTTTGCCTAATATGATACGAATGGCTTCTGCAATGGTATTGGGTTCTAAGCACATTGGGTGTTGTACACATAGTGATAGGTTCTATCGCCTCTCTAACGAGTTAGCTCAAGTACTTACAGAGGTTGTGCATTGCACAGGTGGTTTTTATATCAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAATTCGGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTTGACTCAAACACCTGTAACAATGTTACAGTTAAGTCCATACAACGCAAGATATATGATAATTGTTATCGAAGTAGCAGTGTTGATGATGACTTCGTTGTTGAGTATTTTAGCTATTTAAGAAAGCACTTTTCTATGATGATTTTGTCAGATGATGGCGTGGTTTGTTACAACAAAGACTATGCTGATCTTGGTTATGTAGCAGACATTAGTGCTTTTAAAGCTACTTTGTATTACCAGAATAATGTTTTTATGTCTACAGCCAAGTGTTGGGTAGAACCAGACCTTAATGTTGGACCACACGAATTTTGTTCACAACACACACTACAAATTGTAGGAGCGGATGGTGATTATTATTTACCATACCCAGACCCTTCTAGAATCTTGTCAGCAGGTGTTTTCGTTGATGACATCGTTAAAACAGATAACGTCATTATGCTTGAACGTTATGTGTCTTTAGCAATCGATGCGTATCCACTTACAAAACACCCTAAACCCGCATATCAAAAAGTGTTTTATGCATTGTTAGATTGGGTTAAACATTTACAGAAGACTCTAAATGCTGGTATACTTGATTCATTTTCTGTCACTATGTTGGAGGATGGTCAAGATAAATTCTGGAGTGAAGAGTTCTATGCCAGTCTTTACGAAAAGTCTACTGTTTTGCAAGCTGCCGGTATGTGTATTGTTTGTGGTTCACAAACTGTGTTACGTTGCGGAGACTGTTTAAGGAGACCTCTTTTATGCACTAAGTGCGCTTACGACCATGTCATGGGTACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGCTATAATGGTTGTACTGTTAATGATGTAACAAAATTGTTTTTGGGAGGTCTTAACTATTATTGTACTGAACATAAACCACAATTGTCATTCCCGCTCTGTGCTAATGGCAATGTGTTTGGTCTGTACAAGAGTAGTGCAATTGGTTCTGAGGACGTTGACGATTTCAATAAACTTGCAATCTCGGACTGGACCAATGTAGAAGATTACAAACTTGCTAATAATGTCAAAGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCAAAGGAGGAGTCTGTTAAAGCTGAATATGCTTATGCCATATTAAAGGAGGTGGTCGGCCCTAAGGAAGTTGTACTCCAATGGGAATCCTCTAAGGTTAAACCTCCACTTAACAGAAATTCTGTTTTCACATGTTTTCAGCTAAACAAGGATACTAAAATTCAGTTAGGTGAATTTGTGTTTGAGCAGTCAGAGTATGGTAGTGAATCTGTTTACTACAAGAGTACTAGCACTACTAAGCTGACACCGGGTATGATTTTTGTGTTGACATCTCATAACGTGAGTCCACTTAAAGCTAATATCTTAGTCAACCAAGAGAAGTACAATACCATATCCAAGCTCTATCCTACGTTCAACATAGCGGAAGCCTATACCACATTGGTGCCTTACTATCAAATGATTGGTAAGCAAAAGTTTACAACTATCCAAGGTCCTCCTGGTAGTGGTAAATCACATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAAGCTAGGATCGTCTACACAGCATGTTCACATGCTGCTGTGGATGCATTGTGTGAAAAGGCTTCTAAGAACTTTAATGTGGATAAGTGTTCAAGGATAATACCCCAAAGAATCAGAGTTGACTGCTATATGGGTTTTAAACCTAATAATACTAATGCACAGTACTTGTTTTGTACAGTTAATGCTTTACCTGAAGCTAATTGCGACATCGTAGTTGTGGATGAAGTCTCAATGTGTACAAATTATGATCTCAGTGTTATAAATAGTAGACTGAGTTACAAGCACATTGTTTACGTGGGAGACCCACAACAGCTTCCAGCTCCTAGAACCTTGATTAATAAGGGTACACTCCAGCCTGAAGATTACAATGTTGTAACCCAGAGAATGTGTAAACTAGGACCTGATGTATTTTTGCATAAATGCTATAGATGCCCAGCTGAAATTGTTAAGACAGTCTCCGCGCTTGTTTATGAGAATAAGTTTTTGCCTGTCAACCCAGAGTCAAAGCAGTGCTTTAAAATGTTTGTAAAAGGTCAGGTGCAGATTGAATCCAACTCTTCTATAAACAATAAGCAACTAGATGTTGTTAAGGCATTCCTAGCACATAATCCAAAATGGCGTAAAGCCGTTTTTATCTCACCCTATAACAGTCAGAACTATGTCGCAAAACGTCTACTCGGTTTGCAAACACAAACGGTAGACTCTGCTCAAGGTAGTGAGTATGATTATGTCATTTACACACAGACTTCTGATACGCAGCATGCTATTAATGTCAACAGGTTTAATGTTGCCATTACTAGAGCAAAGGTTGGTATTCTCTGTATCATGTGTGATAGAAAGATGTATGACAATCTTGATTTCTATGAACTCAAAGATTCAAAAGTTGGCTTGCAAGCAAAACCTGAAACGTGTGGTTTGTTCAAAGATTGTTCAAAGACTGATCAATACATACCACCAGCATATGCTACAACATATATGAGTCTGTCTGAAAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAGGATGTTAAATATGCTAATGTTATCTCATATATGGGATTCAGGTTTGAGGCCAATGTACCAGGCTATCACACATTGTTTTGCACACGAGACTTTGCTATGCGTAATGTGAGATCATGGTTAGGGTTTGATGTCGAAGGTGCACATGTCTGTGGTGATAACATCGGAACTAATGTACCACTACAGCTGGGTTTTTCAAATGGTGTAGATTTTGTAGTACAAACTGAGGGATGTGTTGTTACTGAGAAAGGTAATAGTATTGAGGTTGTAAAGGCAAGAGCACCACCGGGTGAGCAATTTGCACATTTGATTCCACTTATGAGAAAAGGTCAGTCTTGGCACATTGTTAGACGTCGTATAGTGCAGATGGTTTGTGACTATTTCGACGGTTTATCTGACATCCTAATTTTCGTGCTTTGGGCTGGTGGTCTGGAGCTTACAACTATGAGATACTTTGTTAAAATTGGAAAACCACAGAAATGTGATTGCGGCAAAATTGCAACGTGTTATAACAGCTCGCAGTGTGTCTATGCTTGTTTTAAACATGCATTAGGATGTGATTACTTGTACAATCCTTACTGCATTGATATTCAACAATGGGGTTATACAGGATCCTTGAGCATGAACCATCATGAAGTTTGTAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGGTGCCTTGCTATATATGATTGTTTTGTCAAGCGTGTAGATTGGTCCATTGTGTACCCATTTATTGATAATGAAGAAAAGATCAATAAAGCTGGTCGCATTGTACAATCACATGTCATGAGAACTGCTCTTAAGGTTTTCAACCCTGCTGCAATTCACGATGTTGGTAATCCTAAAGGTATTCGTTGTGCTACAACATCTATACCATGGTTCTGTTATGACCGTGATCCTATTAATAACAATGTTAGATGTCTGGAGTATGATTACATGGTACATGGACAAATGAATGGTTTAATGTTATTTTGGAATTGCAACGTAGACATGTACCCGGAGTTCTCGATTGTTTGTAGATTTGATACTCGAACTCGCTCAAAATTGTCATTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCATTTCACACACCAGCTTATGATAGAAGAGCATTTGCTAAGCTTAAACCTATGCCATTCTTTTACTACGATGAGAGTGATTGTGAGTTTATTGATGGACAACCTAATTATGTACCACTTAAAGCTAATGTCTGCATAACTAAATGCAACATAGGTGGTGCAGTCTGTAAGAAACATGCAGCACTTTACAGAGCATATGTTGAAGACTACAACACTTTCATACAAGCTGGTTTTACAATTTGGTGCCCTCAAAATTTTGATACATATATGTTGTGGCAAGGTTTTGTTAATAGCAAAGCACTCCAGAGTTTGGAAAACGTAGCCTTCAATGTCGTCAAGAAAGGTGCCTACGCTGATTTAAAAGGTGACTTACCAACAGCAGTTATAGCTGATAAGATCATGGTGAGGGATGGACCTACTGACAAGTGTATTTTCACAAATAAAACTAGTTTGCCTACGAATGTGGCTTTTGAGCTGTATGCAAAACGCAAACTTGGACTCACACCTCCGTTAACAATACTTAGAAATCTAGGTGTTGTCGCAACACATAAATTCGTGTTGTGGGATTATGAAGCCGAATGTCCTTTCTCAAACTTTACTAAGCAAGTGTGTGCGTACACTGATCTTGATGGTGAAGTTGTAACATGTTTTGATAATAGTATTAGTGGTTCTTTTGAACGCTTTACTACTACGAAAGATGCAGTGCTTATTTCTAATAACGCTGTGAGGGGACTCAGTGCCATTAAATTACAATATGGCTTTTTGAATGATTTACCTGTAAGTACTGTAGGAAACAAACCTGTCACATGGTACATCTATGTGCGCAAGAACGGTGAGTACGTCGAACAGATTGACAGTTATTACACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGACTTTTTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACATGTTGTATTCGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCACAAGTGCGCCTAGCAAAAATGGGTTTGTTTTCTGTCCAAGAATTTATGAGTAATTCTGACAGTACACTGAAAAGTTGTTGTATAACATACGCTGACGATCCGTCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTAGACGATTTTGTGACTATCGTTAAGGGCTTAGATCTTAACGTTGTGTCGAAAGTTGTGGATGTTATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAACTCACAAATTAAAACCTTCTATCCACAACTCCAGTCTGCTGAGTGGAATCCTGGCTATAGCATGCCTACACTTTACAAAATACAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAGTTACCTGACGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATATCTCAATACCACTACACTGTGTGTTCCACATAAAATGCGTGTTCTGCATTTGGGAGCAGCAGGTGCTAATGGTGTTGCCCCTGGTACCACTGTATTAAGAAGATGGTTGCCAGACGATGCCATATTGGTTGATAATGATATGAGGGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGACTGTACTAATCTTTATATAGAGGACAAATTTGATTTACTTATCTCTGATTTATATGATGGCTCAACCAAGTCTATAGACGGTGAAAACATGTCGAAAGATGGCTTCTTTACATATATTAATGGTTTTATTAATGAGAAGCTAGCGCTTGGAGGTTCTGTAGCCATCAAAATCACTGAATTTAGCTGGAATAAAAGTTTATATGAATTAATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAATACCTCGTCGTCAGAAGGTTTTCTGATAGGTATCAACTACTTAGGACCATACTGTGACAAGGCTATAGTGGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCCACAATTATGGCGTTGTCACACAACTCAGTCCTAGATACTCCAAAATTCAAGTGTCGTTGCAATAACGCACTTGTTGTTAATTTAAAAGAAAGAGAATTAAATGACATGGTTATTGGATTACTAAGGAAGGGTAAAATACTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAATCACTTTGTTAACACACCA >TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTTAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTCACATATAAAGAGGGTAGATGTGAGTTCGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCTATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCTTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATGCGATAGTGGAAAAAGGCTATATAGGTGTTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGCGATTTCGTGAAGACTGCTCCGGGTTTTGGTTGCGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGGATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTATTAGCTTATGATTTTACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATTATTCATTGTGCTAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACAATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACATTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAGTATTTTGAATGTTATGACGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGACAAGAGTGCTGGCTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATACGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATATCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCTACTGTGGTCATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGATGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTACCGCCTCTCCAATGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGGGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAACGTAAAATTTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCGGATTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAACGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGGCCTGATGGAGACTACTATCTTCCCTATCCAGACCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGACGCATACCCGCTCACAAAACACCCTAAGCCTGCTTATCAAAAAGTGTTTTACACTCTACTAGATTGGGTTAAACATCTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCGTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAGTCCACTGTCTTGCAAGCTGCAGGCATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAATGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATCACACCATATGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCAGTCGGCTCAGAGGCTGTTGAAGATTTCAACAAACTTGCAGTTTCTGACTGGACTAATGTAGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAACAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGCACGAGTACTTACAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCATAATGTGAGTCCTCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAGGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATCCAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCTCATGCGGCTGTAGACGCTTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGATTGTTACACAGGCTTTAAGCCTAATAACACCAATGCGCAGTACTTGTTTTGTACTGTTAATGCTCTACCAGAAGCAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGTACTAATTATGATCTTAGTGTCATAAATAGCCGACTGAGTTACAAACATATTGTTTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCTGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAATTTGTGCCTGTCAACCCAGAATCAAAGCAGTGCTTCAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAACAAGCAACTAGAGGTTGTCAAGGCCTTTTTAGCACATAATCCAAAATGGCGTAAAGCTGTTTTCATCTCACCCTATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCTCAGGGTAGTGAGTATGATTACGTCATCTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGCTGGTATACTTTGTATCATGTGTGATAGACCTATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCAAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGCTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGCTATCACACACTATTCTGCACGCGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGGTTTGACGTTGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAATGTACCATTACAGCTGGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGATGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTGCACACTTGATTCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGATACTTTGTTAAAATTGGAAGACCACAAAAATGTGAATGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCTGTTTATGCTTGCTTCAAGCATGCATTAGGATGTGATTATTTATATAACCCTTACTGCATTGACATACAGCAATGGGGTTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCTTTTATTGACAATGAAGAAAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAATCCTGCTGCAATTCACGATGTGGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAACAATGTTAGATGTCTGGATTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGATACTCGCACTCGCTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTTTACTATGATGATAGTAATTGTGAACTTGTTGATGGGCAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGCAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAAACTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAATGTCGTTAAGAAAGGTGCCTTCACCGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAAATGTATTTTTACAAATAAGACTAGTTTACCTACAAATGTAGCTTTTGAGTTATATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAATTTAGGTGTTGTCGCAACATATAAGTTTGTGTTGTGGGATTATGAAGCTGAACGTCCTTTCTCAAATTTCACTAAGCAAGTGTGTTCCTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCGTTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCAATTAAATTACAATATGGCCTTTTGAATGATCTACCTGTAAGTACTGTTGGAAATAAACCTGTCACATGGTATATCTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTACTATACACAGGGACGTACTTTTGAAACCTTCAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTCTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGAATCCCGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACTACTAATGTCGTTAAGTATACTCAGTTGTGTCAATACCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATATGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGACGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAACTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGACACTCCTAAATTCAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAACACACCA >79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAATAAAGATGTTGCATGTATTGGTAAATTCCTTAAGACCAATTGTTCCCGTTTTAGGAATTTAGACAAACATGATGCCTACTACGTAGTCAAGCGTTGTACTAAGAGCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCAGGTGTAGTTGCTGAACATGACTTCTTTTTGTATAAGGAAGGTCGATGTGAATTCGGTAATGTTGCACGTAAGGATCTTACAAAGTACACAATGATGGATCTGTGTTATGCTATTAGGAACTTTGATGAAAAGAACTGTGAAGTTCTTAAAGAAATACTTGTGACATTAGGTGCCTGCAATGAATCTTTCTTTGAAAATAAGGATTGGTTTGACCCAGTAGAAAATGAAGCTATACATGAAGTATACGCAAGACTTGGACCTATAGTAGCCAACGCTATGCTTAAATGTGTAGCGTTTTGTGATGCTATTGTGGAAAAAGGTTACATAGGTATTATAACTCTTGATAACCAAGATCTTAATGGCAATTTTTACGATTTCGGTGATTTTGTAAAAACAACGCCAGGTTTTGGATGTGCTTGCGTTACATCATATTATTCTTATATGATGCCCTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAATTTTGTGAAAAGTGATATCTATGGTGCTGATTATAAGCAGTACGATTTACTAGCTTATGATTTCACGGACCACAAGGAAAAACTTTTCCATAAATATTTTAAGCACTGGGATCGAACATACCACCCTAATTGCTCTGATTGTACAAGTGATGAGTGCATTATTCATTGTGCTAATTTTAACACGTTATTTTCAATGACCATACCTAGTACCGCTTTCGGACCACTTGTCCGTAAAGTTCACATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACAATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGATCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAACATTTCTTCTTTGCACAGGGCGGTGAGGCTGCTATGACAGACTTCAATTATTACCGCTACAACAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTACGACGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGACAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTCTACCCACAATGACTCAAATGAATTTGAAATATGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCATCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCCACTGTTGTCATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAACATGCTTAAAAATTTGATGCGTGATGTTGATAACGGTTGTTTGATGGGGTGGGACTATCCTAAGTGTGACCGTGCTTTACCTAATATGATTAGAATGGCTTCTGCCATGATATTGGGTTCTAAGCATGTTGGTTGTTGTACACATAGTGATAGATTCTACCGCCTCTCCAACGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACAGGCGGTTTTTACTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCTTACGCTAACTCTGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGCGTTGATTCAAACGCTTGTAACAATGTTACAGTAAAGTCCATACAACGTAAAATCTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCAGATCTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACGCTCTATTATCAGAATAATGTCTTCATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGCGTTGGACCACATGAATTTTGTTCACAACACACATTGCAGATTGTAGGACCTGATGGAGACTACTATCTTCCCTACCCAGACCCGTCTAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTATCATTGGCTATTGATGCATATCCGCTCACAAAACACCCTAAGCCTGCTTATCAAAAAGTATTTTACACTCTGCTAGATTGGGTTAAACATCTACAGAAAAATTTGAATGCAGGCGTTCTTGATTCGTTTTCAGTGACAATGCTAGAAGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTATGCTAGCCTCTATGAAAAATCCACTGTTTTGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 ATGAGTTCCAAACAATTCAAGATCCTCGTCAACGAGGACTACCAAGTCAACGTGCCTAGTCTTCCTATTCGTGACGTGTTACAGGAAATTAAGTACTGTTATCGTAATGGATTTGAGGGCTATGTCTTCGTGCCAGAATACTGTCGTGACCTAGTTGATTGCGATCGTAAGGATCACTACGTCATTGGTGTTCTTGGTAACGGAATAAGTGATCTCAAACCTGTTCTTCTTACCGAACCCTCCGTCATGCTGCAAGGTTTTATTGTTAAAGCTATCTGCAATGGCGCTCTTGAGGACTTTGACCTTAAAATTGCTCGTACTGGAAGAGGTGCTATATATGTAGACCAATACATGTGTGGTGCTGATGGAAAACCAGTCATTGAAGGCGATTTTAAGGACTACTTCGGTGATGAGGACATTATTGAATTTGAAGGAGAAGAGTACCATTGCGCTTGGACAACAGTGCGCGATGAAAAACTGCTTAATCAGCAAACTCTCTTTACTATTCAGGAAATACAATATAATCTGGACATTCCTCACAAACTGCCAAATTGTGCTACTAGACATGTAGCACCACCAGTCAAAAAGAACTCTAAAATAGTTCTGTCTGAAGATTACAAGAAGCTTTATGAAATCTTTGGATCACCCTTTATGGGAAATGGTGACTGTCTGAGCAAATGCTTTGACACTCTTCATTTCATTGCTGCAACTCTTAGATGTCCATGTGGCGCAGAGAGTAGTGGTGTTGGTGATTGGACTGGTTTTAAGACTGCTTGTTGTGGTCTTGTTGGCAAAGTTTTGGGTGTCACGCTGGGTGATATTAAGCCTGGTGATGCTGTTGTCACTAGTATGAGCGCTGGTAAAGGAGTTAAATTCTTTGCCAATTGTGTTCTTCAGCATGCTGGTGATGTTGAAAATGTCTCTGTTTGGAAAGTGATTAAAACTTTTACTGTTGACGAGACTGTTTGCACCCCTGACTTTGAAGGCGAATTGAACGACTTCATTAAACCTGAGAGTAAATCACCAACTGCATGCAGCATTAAAAGAGCATTCATTACTGGTGAAATTGATGATGCTGTACATGATTGTATCATTACAGGAAAATTGGATCTTAGCACTAATCTTTTTGGTAATGTTGGTCTACTATTCAAGAAAACTCCCTGGTTTGTACAAAAGTGTGGTGCACTTTTTGTTGATGCTTGGAAAGTAGTAGAGGAACTTCTTGGTTCACTCAAACTCACATACAAGCAAATTTACGAAGTTGTAGCATCACTTTGCACTTCTGCTTTTACGATTGTAAACTACAAACCAACGTTTGTAGTTTTAGACAATCGCGTTAAAGATCTTGTAGACAAGTGTGTGAATATTCTTGTAAAGGCTTTTGATGTTTTTACGCAGACTATCACAATTGCTGGTATTGAAGCCAAATGCTTTGTGCTTGGTGCTAAATACCTGTTGTTCAATAATGCACTTGTCAAACTTGTCAGTGTTAAAATACTTGGCAAGAAGCAAAAGGGTCTCGAAAGTGCATTCTTTGCTACTAGCTTGGTTGGTGCAACTGTTAATGTGACACCGAAAAGAACTGAGACTGCCACTATTAGCTTGAACAAAGTTGATGATGTGGTGGCACCAGGAGAGGGTTATATTGTCATTGTTGGTGATATGGCTTTCTACAAGAGTGGTGAATACTACTTCATGATGGCTAGTCCTGATTCTGTTCTTATTAACAATGTTTTTAAAGCAGCTAGAGTCCCATCTTATGACATCGTGTATGATGTTGATGATGACACCAAGGGCAAGATGACTGCAAAACTTGGTTCATCATTTGAATATGATGGTGATATTGATGCTGCTGTTACTAAAGTCAATGAGTTACTCATTGAATTTAAACAACAAAGTCTTTGTTTTAGAGCACTTAAAGATGACAAAAGCATTTTTGTTGAAGCTTATCTTAAAAAGTACAAAATGCCTGCATGCCTTGCAAAACATATTGGTTTGTGGAACATCATAAAGAAAGATTCATGTAAGAAGGGTTTTCTTAGTCTTTTCAATCACTTGAACGAATTGGAAGACGTCAAAGAAACCAATGTTCAGGCTATTAAGAATATTCTTTGCCCTGATCTTCTTCTTGATCTGGATTATGGTGCCATTTGGTACAAGTGCATGCCGAGTTGCTCTGATTTATCTGTGTTGGGGAGTGTCCAACTTTTGATTGGCAACGGTGTGAAAGTAGTTTGTGATGGCTGCAAAGTTTTTGCTAACCAACTTTCAAATGGTTACAATAAGCTCTGTAATGCTGCTCGCACTGATATTGAAATCGGTGGTATACCATTTTCTACTTTCAAAACACCTACAAATACTTTTATTGAAATGACAGATGCTATCTACTCAGTTATTGAACAAGGTAAAGCATTGTCCTTTGGAAATGCTGATGTGCCAGTTTTAGACAATGGTACCATTTCTACTGATGATTGGTCTGAACCCATTTTGCTTGAACCTGCTGAATATGTGAAACCCAAGAACAATGGTAATGTCATTGTTATTGCAGGTTACACATTTTATAAAGATGAAGATGAACACTTCTATCCTTATGGTTCTGGTAAAATTGTGCAGAGAATGTATAATAAAATGGGTGGTGGTGATAAAACTGTCTCATTTTCAGAAGAAGTAGATGTTCAAGAAATTGCACCTGTTACACGTGTTAATCTTGAATTTGAATTTGACAATGAAATTGTAACTGGTGTGCTTGAGCAGGCTATTGGTACTAGATATAAATTTACTGGTACAACTTGGGAAGAATTTGAAGATTCTATTTCTGAAGAACTTGATGCAATTTTTGATACTCTAGCAAACCAAGGTGTCGAACTTGAAGGTTACTTCATTTATGATACTTGTGGTGGCTTTGATTTCAAAAATCCAGATGGTATTATGATCTCTCAGTATGATATCAATAATATTGCTGATGAAAAATCAGAAACAGGTGCATCAAGTGAGGAAGAAGAAGTTGAGTCTGTTGAAGAAGACGCTGAGAATGAAATTGTAGAAGCATCTGAAGCTATTGAAGAGACTTCTTCTCAAGAAGAGGTAGAAACAGTAGAAGTTGAAGATATTACTTCTGCAGAAGATGTT------------GAAATTGTGGAAGTGTCTGCTAAGGATGACCCATGGGCTGCTGCTGTTGATGTACAAGAAGCTGAACATGTTAAGCCTTCTTTACCACCTTTCAAGACAACAAATCTTAATGGTAAAATCATCCTTAAACAACAGGATAACAATTGTTGGATAAATGCTTGTTGCTATCAGCTGCAGGCTTTTGACTTTTTCAACAATGAAGCTTGGGAAAAATTTAAGAAAGGTGATGTTATGGATTTTGTCAATCTCTGTTATGCAGCCACAACACTTGAAAGGGGTCATTCTGGTGATGCAGAGTATCTTCTTGAACTTATGCTCAATGACTATAGTACGGCAAAAATAGTACTTGTTGCCAAGTGTGGCTGTGGCGAAAAAGAAATTGTATTGGAAAGAACTGTGTTTAAACTCACTCCATTAAAGGATGAGTTTAATTATGGTGTTTGTGGTGAATGTATGCAAATTAACAGGTGCAAAGTTGCAAGTGTTGAAGGATCTGGTTTGTTTGTACATGATTGT---ATTGACAAACAGACTCCCACGTCACAATTTATTGTTAAGCCAATTATGCATGCAGTGTACACTGGAACAACTCAAAATGGTCATTACATGGTCGATGACATTGAACATGATTATTGTGTTGATGGTATGGGTATTAAGCCACGTAAGAAACGACTTTACACATCCACACTATTCATCAATGCTAATGTAATGACTAGAGTTGAAAAACCAAAACAACAACCTAAAGTTGAAAAAGTAGAACAGCAACCAGAAATAGAGGAAAAGAAACCTTCAATTGAAAAAGAGGAAGTTCAAAGTCCTAAAAATGATGATCTTATACTTCCATTTTACAAAGCTGGTAAACTTTCCTTTTATCAGGGTGATTTGGATGTTTTGATCAATTTCTTGGAACCTGATGTCATTGTTAATGCTGCCAATGGTGATCTTAAACACATGGGTGGTGTCGCAAGAGCCATCGATGTTTTCACTAGTGGCAAATTAACAGAACGTGTGATGGATTATCTTAAAAAGAACAAATCTATTGCTCCTGGTAATGCTGTTTTCTTTGAAAATGTCATTGAGAATCTTAGTGTTTTGAATGCTGTAGGACCACGTAATGGTGACAGCCGGATTGAAGGCAAACTTAATAATGTCTATAAGGCCATTGCAAAGTGTGAAGGAAAAATACTAACACCACTTATCAGTGTTGGTATTTTCAGTGTTAAACTTGAAATGTCATTGCAGTGCTTACTTAAGACTGTAAATGATAGAGAATTGAATGTCTTCGTGTACACTGATCAGGAGAGACAAGCCATTGAGAACTTCTTCTCTGGTTCTATCCCTGTCAAAGTTACTGAAGATAATGTCAACCATGAACGTGTGTCCGTTTCTTTTGACAAAACATACGGTGAACAACTTAAAGGTACCGTGGTCATTAAAGACAAAGATGTTACAAACCAGTTGCCTAGTGCTTTTGATGTTGGTCAGAAAGTTGTTAAGGCTATTGACGTAGATTGGCAAGCTCATTATGGTTTCCATGATGCTGCTGCCTTTAGTGCTAGTAGCCATGATGCTTACAAGTTTGAAGTCGTTACACATAGCAACTTCATTGTACATAAGCAGACTGATAACAACTGCTGGATTAATGCAATTTGTCTTGCATTACAGAGACTTAAACCTCAATGGAAATTTCCTGGTGTTAGAGGTCTTTGGAATGAATTTCTTGAGCGTAAAACACAAGGTTTTGTACACATGCTGTATCACATTTCAGGAGTAAAGAAAGGTGAGCCAGGTGATGCTGAATTGACTCTGCATAAACTTGGTGATTTGATGGATAATGATTGTGAAATCATTGTCACACATACTACAGCATGTGACAAATGCTCCAAAGTTGAAAAGTTTACTGGACCAGTGGTAGCAGCGCCGCTTGCAATTCATGGCACTGATGAAACATGTGTTCATGGTGTTAGTGTTAATGTTAAAGTTACTCAGATTAAGGGCACTGTTGCTATCACATCTTTGATTGGTCCTATTATTGGAGAAGTACTTGAAGCAACTGGTTACATCTGTTATAGAGGTTCAAGCAAGAATGGTCATTACACCTATTACGACAATCGTAATGGGTTAATGATTGATGCAGAAAAGGCTTACCACTTTAATAAAGACCTATTACAAGTCACGACAGCCATTGCAAGTAATTTTGTTGTCAAGAAACCACAAGTAGAAGAAAAACCTAAG---------------------------ACTCGTGTTTTTAACAGAGTAGATGAGCCTCCAAAGACTATAGTACAAGAACAAAAGTTGTTGGCTATTGAAAGTGGTGCTGATTACGCTCTCACAGAGTTTGGAAGATATGCTGACATGTTCTTTATGGCTGGAGACAAAATTCTTAGGTTTCTGCTTGAAGTCTTTAAATATCTGTTGGTTTTGTTTATGTGTCTTAGAAGTACTAAGATGCCTAAAGTTAAAGTAAAGCCACCTCATGCATTTAAAGACTTAGGTGCTAAAGTTAGAACACTTAATTACATGAGGCAATTGAACAAACCTGCTGTTTGGCGTTATGCAAAACTAGTTTTATTGCTAATAGCAATATATAATTTCTTTTATTTGTTTGTCAGTATACCAGTAGTTCATAAATTAACATGTAGTGGTGCTGTACAGGCATATAAAAATTCTAGTTTTGTGAAGTCAGAAGTTTGTGGTAACTCTATTCTTTGTAAAGCTTGTTTGGCTTCTTATGATGAGCTGGCTGACTTCCAACATCTTCAAGTTGCTTGGGATTTCAAGTCAGATCCACTCTGGAATAAACTGGTACAATTGTCTTATTTTGTATTTTTGGCTGTCTTTGGTAACAATTATGTTAGATGCTTTCTTATGTACTTTGTGTCCCAGTACCTCAACCTGTGGCTTTCTCACTTTGGTTACGTAGAGCACAGCTGGTTTTTGCATGTTGTCAGCTTTGAATCTATTTCAGCTGAGTTTGTGATTATAGTTATTTTGGTTAAGGCAGTTCTCGCTCTTAAACATATTGTCTTCTCATGCTCAAACCCATCTTGTAAAACTTGCTCTAAAACTGCAAGGCAGACACGTATTCCGATACAGGTTGTTGTTAATGGCTCTATGAAGACAGTTTATGTTCATGCCAACGGTACTGGTAAACTCTGCAAGAAACATAACTTTTATTGTAAGAATTGTGATTCTTATGGTTTTGAGAATACATTCATCTGTGACGAAATTGTTCGTGATCTCAGTAATAGTGTTAAACAGACTGTTTATGCTACTGATAGATCTCATCAAGAAGTCACAAAAGTTGAATGTTCAGATGGATTTTACAGGTTCTATGTTGGTGATGAATTCACTTCATATGATTATGATGTAAAACATAAGAAGTACAGTAGTCAAGAGGTTCTTAAGAACATGCTCTTGCTTGATGACTTTATTGTGTACAGTCCATCTGGTTCTTCTCTTGCAAACGTAAGAAATGCCTGTGTGTACTTTTCACAACTTATTGGTAAGCCTATTAAGATTGTTAACAGTGATTTACTTGAAGACCTCTCTGTAGACTTTAAAGGAGCACTTTTCAATGCTAAGAAGAATGTAATTAAGAATTCTTTCAATGTAGACGTTTCGGAATGTAAAAATCTTGATGAGTGCTATAAAGCTTGCAATCTTGATGTGTCATTTTCAACATTTGAAATGGCTGTCAATAATGCTCATAGATTTGGTATTTTGATTACTGACCGTTCTTTTAACAATTTTTGGCCATCAAAAGTCAAACCTGGTTCATCTGGTGTTTCAGCCATGGACATTGGTAAGTGTATGACCTCTGATGCTAAAATTGTTAATGCTAAAGTTTTGACTCAACGTGGTAAAAGTGTTGTTTGGCTTAGTCAAGATTTTGCTGCACTTAGCTCAACTGCCCAGAAAGTTTTGGTTAAAACTTTTGTAGAAGAAGGTGTCAACTTTTCACTCACATTCAATGCTGTAGGTTCAGATGATGATCTTCCTTATGAAAGATTCACTGAATCTGTGCCTCCAAAAAGTGGTTCAGGCTTTTTCGATGTAATCAAACAGCTTAAACAAATTGTGATGTTAGTTCTTGGTTTCATCTTTATCTATGGTTTGTGCTCTGTCTACAGTGTTGCTACACAGTCCTACATTGAATCTGCTGAAGGTTATGACTACATGGTTATTAAGAATGGAATTGTTCAACCTTTTGACGACACCATTTCATGTGTTCATAACACTTACAAAGGATTTGGTGAATGGTTTAAAGCTAAGTACGGTTTTATCCCTACTTTTGCCAAAGCATGCCCAATTGTTGTAGGAACTGTTTTTGATCTTGAAAACATGAGACCAATTCCTGATGTGCCTGCATATGTAGCTCTTGTTGGTAGATCTCTTGTTTTTGCTATTAATGCTGCTTTTGGTGTTACTAATATGTGCTATGATCATACTGGCAATGCAGTGAGTAAGGATTCTTACTTCGACACTTGTGTGTTTAATGCTGCATGCACCACTCTTACAGGTCTTGGTGGTACAATTGTTTATTGTGCAAAACAAGGTCTAGTTGAAGGTGCTAAGCTCTATAGTGATCTTATGCCTGACTATTATTATGAGCACGCTAGTGGTAACATGGTTAAATTGCCAGCAATTATTAGAGGACTTGGTCTACGGTTTGTAAAAACACAGGCTACGACTTACTGCAGAGTAGGAGAGTGTATTGACAGCAAAGCTGGTTTTTGCTTTGGTGGTGATAACTGGTTTGTCTATGACAAAGAGTTTGGTAATGGGTACATTTGTGGTAATTCTGTTTTAGGATTCCTTAAGAATGTCTTCAGACTCTTTAACTCTAACATGTCTGTGGTAGCCACATCAGGTGCGATGCTTGTTAACATTATCATTGCTTGCCTGGCTATTGCAATGTGTTATGGTGTTCTTAAATTTAAGAAAATATTTGGTGACTGCACTCTTCTGATTGTTATGATTATTGTTACACTTGTTGTAAACAATGTGTCTTATTTTGTCACTCAAAACACATTCTTTATGATTATTTATGCCATTGTTTATTACTTTACAACTAGGAAGCTTGCATACCCAGGCGTCCTTGATGCTGGGTTTATTATTGCTTACATTAACATGGCTCCATGGTATGTGATTACTGCATACATCTTAGTGTTCCTCTATGACTCACTTCCTTCACTGTTCAAACTTAAGGTTTCAACAAACCTTTTTGAAGGTGACAAATTTGTGGGTAACTTTGAATCTGCCGCTATGGGTACTTTTGTTATTGATATGCGTTCATATGAAACTATTGTTAATTCTACTCCTATTGATAGAATTAAATCATATGCTAACAGCTTCAATAAATATAAGTACTACACAGGTTCAATGGGAGAGGCTGACTACAGAATGGCTTGCTATGCTCATCTTGGTAAAGCTCTTATGGACTATTCTGTTAACAGAACAGACATGCTTTACACACCTCCTACTGTTAGTGTTAATTCCACACTTCAGTCCGGGTTGAGGAAAATGGCACAGCCTAGTGGTCTTGTAGAGCCTTGCATTGTAAGAGTTTCCTATGGTAACAATGTGCTTAATGGTTTATGGTTAGGAGATGAGGTCTTTTGTCCTAGACATGTCATTGCTAGTGATACCACACGTGTTATCAACTATGAAAATGAAATGTCCAGTGTGAGACTTCATAATTTTTCAGTTTCTAAAAATAATGTGTTTTTGGGTGTTGTGTCTGCCAAATATAAGGGTGTGAATCTCGTACTAAAAGTCAACCAGGTTAATCCTAACACACCAGAACATAAATTTAAGTCTATTAAAGCTGGTGAAAGTTTTAACATTCTTGCTTGTTATGAGGGATGTCCTGGTAGTGTTTATGGTGTTAACATGAGAAGCCAAGGTACCATTAAAGGTTCTTTTATTGCTGGTACTTGTGGATCAGTAGGTTATGTTTTGGAAAATGGAATTCTCTATTTTGTATACATGCATCACCTAGAACTTGGAAATGGCTCACATGTTGGTTCCAATTTTGAAGGAGAAATGTATGGTGGTTATGAAGATCAACCTAGCATGCAACTTGAAGGTACTAATGTCATGTCATCAGATAATGTGGTTGCATTTTTGTATGCTGCACTTATTAATGGTGAAAGGTGGTTTGTTACAAACACATCAATGTCATTAGAATCATACAATACATGGGCCAAAACTAACAGTTTCACAGAACTCTCTTCAACTGATGCATTTAGCATGTTGGCTGCGAAAACTGGTCAAAGTGTTGAGAAATTGCTAGATTGCATTGTAAGACTCAACAAAGGTTTTGGAGGTCGTACCATACTTTCTTATGGCTCACTGTGTGATGAGTTCACCCCAACTGAAGTCATAAGGCAAATGTATGGTGTAAATCTTCAAGCTGGTAAAGTAAAATCTTTCTTTTACCCTATTGTGACTGCAATGACAATTCTCTTTGCTTTTTGGCTTGAATTTTTCATGTACACACCCTTTACTTGGATTAACCCAGCTTTTGTTAGCTTTGTATTGGCTGTTACAACTTTGGTTTCGACTGTTTTTGTTTCAGGAATTAAACATAAGATGTTGTTCTTTATGTCTTTTGTTCTGCCTAGCGTTGTTCTTGTAACAGCACACAACTTATTCTGGGACTTTTCTTACTATGAAAGTCTTCAGTCAATTGTTGAAAATACTAACACTATGTTCTTGCCTGTTGACATGCAAGGTGTCATGCTCACAGTGTTTTGTTTTATTGTCTTTGTCACATACAGTGTTAGATTCTTCACTTGTAAACAATCATGGTTCTCACTCGCCGTGACAACTGTTCTTGTGATTTTTAACATGTTTAAAATTTTTGGAACATCTGATGAACCATGGACTGAAAACCAAATTGCTTTCTGCTTTGTGAACATGCTTACTATGATCGTCAGTCTTACTACAAAAGATTGGGTTGTTGTTGTTGCATCATACAGAGTCGCTTACTATATTGTTGTATGTGTAATGCCAGCTGCTTTTGTGTCTGACTTTGGCTTTATGAAGTGTATTAGCATTGTTTACATGGCTTGTGGTTATTTGTTCTGCTGTTATTATGGTATCCTCTATTGGGTTAACAGATTTACATGCATGACTTGTGGTGTTTATCAATTCACTGTGTCTGCAGCTGAACTTAAATACATGACTGCTAACAACCTTTCTGCACCTAAGAATGCGTATGACGCTATGATTCTTAGTGCTAAATTGATTGGTGTTGGAGGTAAGAGAAACATTAAAATTTCAACTGTACAGTCAAAACTTACAGAGATGAAATGTACAAATGTAGTCTTGCTCGGTCTTTTGTCTAAAATGCATGTTGAGTCTAACTCAAAAGAGTGGAACTATTGTGTAGGACTACACAATGAGATCAACCTTTGTGACGATCCTGAGATTGTTCTTGAAAAGTTGTTAGCTCTCATTGCATTCTTTTTGTCCAAACACAATACTTGTGACCTTAGCGAACTTATTGAATCATACTTTGAGAACACTACCATACTTCAGAGTGTGGCTTCAGCTTATGCTGCACTGCCTAGCTGGATTGCATTTGAAAAACGTCGCGCTGATCTTGAAGAGGCTAAGAAAAATGATGTTAGCCCTCAAATTTTGAAACAGCTTACCAAGGCATTTAATATTGCCAAAAGTGATTTTGAGCGCGAAGCTTCAGTTCAAAAGAAGCTTGACAAAATGGCTGAGCAGGCTGCTGCTAGTATGTACAAAGAAGCACGAGCTGTGGATAGAAAATCAAAAGTCGTTTCTGCTATGCATAGCCTACTTTTTGGTATGCTTAAGAAACTCGATATGTCTAGTGTCAACACTATTATTGACCAGGCTCGTAATGGTGTTTTACCTTTAAGTATCATTCCAGCTGCATCAGCTACAAGACTTGTTGTTGTAACACCTAGTCTTGAAGTGTTTTCCAGGATTAGGCAAGAAAACAATGTTCATTATGCTGGTGCTATTTGGACTATCGTTGAAGTCAAAGACGCTAATGGTTCACATGTTCATCTTAAAGAAGTCACTGCTGCTAATGAATTAAATCTTACTTGGCCGTTGAGCATTACTTGTGAGAGAACCACAAAGCTTCAGAACAATGAAATTATGCCAGGTAAACTTAAAGAAAGAGCGGTCAAAGCTTCAGCCATTTTAGATGGTGAAGCTTTCGGCAGTGGAAAGGCTCTTATGGCAGCTGAAAGTGGCAAAAGCTTTATGTATGCATTTATAGCCTCAGACAACAATCTTAAGTATGTCAAATGGGAGAGCAATAATGATATCATACCTATTGAACTTGAAGCTCCATTGCGTTTCTATGTTGATGGCGTTAATGGTCCTGAAGTCAAGTATTTGTACTTCGTCAAGAACTTAAACACTCTTAGACGTGGTGCCGTTCTTGGTTATATCGGTGCAACAGTTCGTCTGCAAGCTGGTAAACCCACTGAACATCCATCTAATAGTAGTTTATTGACATTGTGTGCTTTTGCACCTGATCCTGCTAAAGCATATGTTGATGCTGTTAAAAGAGGTATGCAACCAGTTAATAACTGTGTAAAAATGCTCTCAAATGGTGCTGGTAATGGTATGGCTATTACAAATGGTGTCGAAGCTAACACACAACAAGATTCTTATGGTGGCGCTTCTGTTTGCATTTACTGCAGATGCCATGTGGAACATCCCGCTATTGATGGAATGTGCCGTTACAAAGGCAAATTTGTACAAATACCAACTGGCACTCAAGACCCCATTCGCTTTTGTATTGAAAATGAAGTTTGTGTTGTCTGTGGCTGTTGGCTTAACAATGGTTGCATGTGCGATCGTACTTCTATGCAGAGTTCTACTGTTGATCAAAGTTATTTAAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGTAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAGTTCCTTAAGACAAACTGTTCAAGATTTAGGAATTTGGACAAACATGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACTTACAAAGAAGGCAGATGTGAATTCGGCAACATCGCACGTAGGGATCTTACAAAGTACACAATGATGGATCTTTGTTATGCTATTAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTCGTGACAGTAGGTGCTTGCACTGAAGAATTCTTTGAAAACAAAGATTGGTTTGACCCAGTTGAAAATGAAGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGCGTTGCTTTTTGCGATGCCATAGTGGAAAAGGGCTATATAGGTATTATAACACTTGACAACCAAGATCTTAATGGCAATTTCTACGATTTCGGAGATTTCGTAAAAACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGCTTAGAGTCTGAAAACTTTGTGAAAAGTGAAATTTATGGTTCTGACTATAAGCAGTATGATTTACTGGCTTATGATTTCACTGAACATAAAGAGTACCTTTTCCAGAAATACTTTAAGTACTGGGATCGCACGTATCACCCAAATTGTTCTGATTGTACTAGTGATGATTGTATCATTCATTGTGCTAATTTCAACACACTATTTTCTATGACAATACCAATGACTGCTTTCGGACCACTTGTCCGTAAAGTTCACATTGATGGTGTGCCAGTTGTTGTTACTGCAGGTTACCACTTTAAACAACTTGGTATTGTATGGAATCTTGATGTGAAATTGGACACAATGAAGTTGACTATGACAGATCTGCTTAGATTTGTCACAGATCCTACACTTCTTGTAGCATCAAGCCCTGCATTGTTAGATCAACGCACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTGTTACATATCAGACAGTAAAGCCAGGTCACTTTAACAAAGATTTCTACGATTTTATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAATTAACATTAAAACACTTTTTCTTTGCACAGGGCGGTGAAGCTGCTATGACAGACTTCAATTACTATCGCTACAATAGAGTCACAGTACTAGACATTTGCCAAGCTCAGTTTGTTTACAAAATAGTTGGCAAATATTTTGAATGCTATGATGGTGGGTGCATTAATGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTATGAAACTCTGTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTCTACCCACAATGACTCAGATGAATTTGAAATATGCTATTTCTGGAAAGGCTAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCACCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAATGCCACTGTGGTTATTGGCTCAACCAAGTTTTATGGTGGTTGGGATAACATGCTTAAAAATTTAATGCGTGATGTTGATAATGGTTGTTTGATGGGATGGGACTATCCTAAGTGTGACCGCGCTTTACCTAATATGATCAGAATGGCATCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAGTGATAGATTCTATCGCCTCTCCAATGAGTTAGCTCAAGTACTCACAGAAGTTGTGCATTGCACGGGTGGTTTTTACTTTAAACCTGGTGGTACAACTAGCGGTGATGGTACTACAGCTTATGCTAACTCAGCTTTTAACATCTTTCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTGGGAGTCGATTCAAACGCTTGTAACAATGTTACAGTAAAATCCATACAACGTAAAATCTACGATAATTGTTATCGTAGTAGCAGCATTGATGAAGAATTTGTTGTTGAATACTTCAGTTATTTGAGAAAACACTTTTCTATGATGATTCTATCTGATGATGGAGTTGTGTGCTACAACAAAGATTATGCAGATCTAGGTTATGTAGCTGATATCAATGCTTTTAAAGCAACGCTCTATTATCAGAATAATGTCTTTATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAATGTTGGACCACATGAATTTTGTTCACAGCACACATTGCAAATTGTTGGACCTGATGGAGACTATTACCTTCCCTATCCAGACCCATCTAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGATAATGTTATTATGTTAGAACGTTATGTGTCATTGGCTATTGATGCATACCCACTCACAAAACATCCTAAGCCTGCTTATCAAAAAGTATTTTACACCCTGCTTGATTGGGTTAAACATTTACAGAAAAATTTGAATGCAGGTGTTCTTGATTCCTTCTCAGTTACAATGCTAGAAGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTATGCTAGCCTCTATGAAAAATCTACTGTTTTGCAAGCTGCAGGCATGTGTGTTGTATGTGGTTCACAAACTGTATTGCGTTGTGGAGACTGTCTTAGGAGACCACTTTTGTGTACGAAATGTGCTTATGACCATGTTATGGGAACAAAGCACAAATTCATTATGTCTATCACACCATACGTGTGTAGTTTTAATGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGGACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAATGTTTTTGGTTTATACAAAAGTAGTGCAGTCGGTTCAGAGGATGTTGAAGACTTCAACAAACTCGCAGTTTCCGATTGGACTAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCCCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCCTATGCCATATTAAAGGAGGTTATCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAACAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGCACAAGTACTTACAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCATAATGTGAGTCCTCTTAAAGCCACAATTTTGGTCAACCAGGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAACATAGCGGAAGCCTATAATACACTGGTCCCTTACTATCAAATGATAGGTAAGCAGAAATTTACAACTATCCAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTATCCTCAAGCCAGAATAGTCTACACAGCATGTTCCCATGCTGCTGTGGACGCTTTATGTGAAAAAGCGGCCAAGAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGATTGTTACACAGGTTTTAAGCCTAACAACACTAATGCTCAGTACTTGTTTTGTACTGTTAATGCTCTACCAGAGGCAAGTTGTGACATTGTTGTAGTCGATGAGGTCTCCATGTGTACTAACTATGACCTTAGTGTCATAAATAGTAGACTGAGTTACAAGCATATTGTCTATGTAGGAGACCCTCAACAATTACCAGCTCCTAGAACCTTGATTAATAAGGGTGTGCTTCAACCACAGGATTATAATGTGGTAACTCAAAGAATGTGCACATTAGGACCTGATGTTTTCTTACACAAATGTTATAGATGCCCAGCTGAGATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAATTTGTACCTGTCAACCCTGAATCAAAGCAGTGCTTCAAGATGTTTGTAAAAGGTCAGGTTCAGATTGAATCAAACTCTTCTATAAACCATAAGCAACTAGAGGTTGTCAAGGCATTCTTAGCACATAATCCAAAATGGCGTAAAGCTGTTTTTATCTCACCCTATAATAGTCAAAACTATGTTGCAAGACGTCTTCTTGGTTTACAAACTCAAACTGTAGACTCTGCACAAGGTAGTGAGTATGATTATGTGATTTACACACAGACTTCTGACACACAGCATGCTACTAATGTCAATAGATTTAATGTTGCCATTACTAGAGCAAAAGTTGGTATTCTCTGTATCATGTGTGATAGGAGCATGTATGATAACCTTGACTTCTATGAACTCAAGGATTCTAAGATTGGCTTACAAGCAAAACCTGAAACATGTGGTTTGTTTAAAGATTGTTCAAAGAATGAGCAATACATACCACCTGCATATGCAACAACATATATGAGCTTGTCTGATAATTTTAAAACAAGCGATGGTCTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAACGTCATTTCATATATGGGATTCAGGTTTGAAGCCAATATACCAGGCTATCACACATTGTTTTGCACGCGAGACTTTGCTATGCGTAATGTTAGAGCATGGCTTGGATTTGACGTTGAAGGTGCACATGTCTGTGGTGATAATGTTGGAACTAATGTACCATTACAGCTGGGTTTCTCTAATGGTGTTGATTTTGTAGTACAAACTGAAGGATGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAAGCACGAGCACCACCAGGTGAGCAATTTGCACACTTGATTCCACTTATGAGAAAAGGTCAACCCTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGATACTTTGTTAAGATTGGAAAACCACAAAAATGTGAATGCGGCAAAACTGCAACTTGTTATAGTAGCTCTCAATGTGTCTATGCTTGTTTCAAGCATGCATTGGGCTGTGATTATTTATATACCCCCTATGGCATTGACATACAACAATGGGGCTACACAGGTTCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGGTGCCTTGCTATACATGATTGTTTTGTCAAACGTGTTGATTGGTCTATTGTGTACCCTTTTATTGACAATGAGGAAAAGATCAATAAAGCTGGTCGCATTGTGCAATCACATGTCATGAAAGCTGCTCTGAAAATTTTTAACCCTGCTGCAATTCACGATGTGGGCAATCCCAAAGGCATCCGTTGTGCTACAACACCTATACCATGGTTCTGTTATGACAGAGATCCTATTAATAACAATGTTAGATGTCTGGAGTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGCAATGTAGACATGTACCCAGAGTTCTCAATTGTTTGTAGATTTGATACTCGCACGCGCTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTTTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTGCCACTCAAGTCTAATGTTTGCATAACAAAATGCAATATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATGTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAAATTTCGATACTTATATGCTTTGGCATGGTTTTGTTAATAGCAAAGCACTCCAGAGTCTAGAAAATGTGGCTTTTAATGTCGTTAAAAAAGGTGCCTTCACAGGTCTAAAAGGAGACTTACCAACTGCTGTTATAGCTGACAAGATAATGGTGAGAGAGGGACCTACTGACAAGTGTATCTTTACAAACAAGACTAGTTTACCTACAAATGTAGCTTTTGAGCTATATGCAAAACGTAAACTTGGACTCACACCTCCATTAACAATACTTAGAAATTTGGGTGTTGTCGCAACATACAAATTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACCAAACAAGTGTGCTCGTATACTGACCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAACGCTTTACTACTACAAAAGATGCAGTGCTTATTTCTAATAACGCTGTGAAGGGACTTAGTGCCATTAAATTACAATATGGCTTTTTGAATGATCTACCTGTAAGTACTGTTGGAAACAAACCTGTCACATGGTATATCTATGTGCGCAAGAATGGTGAGTACGTCGAACAAATTGATAGTTACTACACACAGGGACGTACTTTTGAAACCTTTAAACCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATCCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTCCTCATATCTCAAGTGCGCCTTGCAAAAATGGGTTTGTTTTCTGTGCAAGAATTTATGACCAATTCTGACAGTACACTGAAAAGTTGTTGTATTACATATGCTGATGATCCTTCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTTATTGTAGATTGTAAGGCATGGAGGTGGATGTTGTGGTGTGAAAATTCACAAATTAAAACCTTCTATCCACAACTCCAATCTGCTGAATGGAATCCTGGCTATAGCATGCCTACATTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAACTACCTGATGGCATTACTACTAATGTCGTTAAGTATACCCAGTTGTGTCAATACCTTAACACTACTACTTTGTGTGTACCACACAAAATGCGAGTCTTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGGTGGTTACCAGATGATGCCATATTGGTTGATAACGATTTGAGAGATTACGTTTCCGACGCAGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATTGAAGACAAGTTTGATTTGCTTATCTCTGATTTATATGACGGCTCCACAAAGTCAATTGACGGTGAAAATACGTCAAAGGATGGTTTCTTTACTTATATCAATGGTTTTATTAAAGAGAAGCTATCACTTGGTGGGTCTGCTGCCATTAAAATCACAGAATTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACCTCATCGTCAGAAGGTTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGAAAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAATTCAGTCCTAGATACTCCCAAGTTTAAGTGCCGGTGTAATAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTTGTTGGATTACTAAGGAAAGGTAAGTTGCTCATTAGAAACAATGGAAAACTACTAAACTTTGGTAATCACTTGGTTAATGTGCCA >TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTCAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACACGATGCCTACTACATTGTCAAACGTTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTTGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCCATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTTGTGACATTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAGGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATTCGATAGTTGAAAAAGGCTATATAGGTGTTATAACACTTGACAATCAAGACCTTAATGGCAATTTCTACGATTTCGGAGATTTCGTGAAGACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTCACTGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATCATTCATTGTGCCAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACCGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACGATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAGCACTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGATGGTGGGTGCATTAGTGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGTTATCCTTTGAATAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATATGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATATCACCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAACGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGATAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTCTGATGGGATGGGACTATCCAAAGTGTGACCGTGCTCTACCTAACATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTATCGCCTCTCCAATGAGTTAGCGCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTCCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTAGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAGCGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGACGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTCGTGTGCTACAACAAAGATTATGCTGACTTAGGTTATGTGGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAATGTCTTCATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCAGATGGAGACTACTACCTTCCCTATCCAGATCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAGCGTTACGTGTCATTGGCTATTGATGCATACCCACTTACAAAACATCCTAAGCCTGCTTATCAAAAAGTTTTTTATACTCTATTAGATTGGGTTAAACATTTACAGAAAAACTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCTACTGTCTTGCAAGCTGCAGGTATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAGTGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATTACGCCATATGTGTGTAGTTTTAGTGGTTGTAACGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTAGGTTCAGAGGCTGTTGAAGATTTTAACAAACTTGCAGTCTCTGACTGGACCAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTGTCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGATTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGTACGAGTACTTATAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCACAACGTGAGTCCCCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATACAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCCCATGCTGCTGTAGACGCCTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGACTGTTATACTGGCTTTAAGCCGAATAACACTAATGCGCAGTACTTGTTTTGTACTGTCAATGCTTTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGCACTAATTATGATCTTAGTGTCATAAATAGCCGGCTGAGTTACAAACACATTGTCTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCCGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAATAAGTTTGTACCTGTCAACCCAGAATCAAAGCAATGCTTTAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAATAAGCAACTAGAGGTTGTCAAGGCCTTTTTAACACATAATCCAAAATGGCGCAAAGCTGTTTTCATCTCACCATATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATTTACACACAGACCTCTGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACCATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCTAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGTTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGTTATCATACACTATTCTGCACACGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGCTTTGATGTTGAAGGCGCACATGTCTGTGGTGATAATGTTGGAACTAACGTACCATTACAACTTGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGGTGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAATCACGGGCACCACCGGGTGAGCAATTTGCACACTTGATCCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGATCTGTGACTATTTTGATGGCTTATCAGACATTCTAATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTATTTTGTTAAAATTGGAAGACCACAAAAATGTGAGTGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCCGTCTATGCTTGCTTTAAGCATGCACTAGGATGTGATTATTTATACAACCCTTATTGCATTGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTTAAACGTGTTGATTGGTCAATTGTGTACCCCTTTATTGACAATGAAGACAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAACCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAATAATGTTAGATGCCTGGACTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGACACTCGCACTCGTTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCACGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTCTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGTAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAACTTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAGAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAACGTCGTTAAGAAAGGTGCCTTCACTGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGATAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACTAATGTAGCTTTTGAGTTGTATGCAAAACGTAAACTTGGACTCACACCTCCATTAACAATACTTAGGAACTTAGGTGTTGTCGCAACATATAAGTTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCTTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCATTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAGTTACAATATGGCTTTTTGAATGATCTACCTGTAAGTACTGTTGGGAATAAACCTGTCACATGGTATATATATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACTTTTGAAACCTTTAAGCCTCGTAGTACAATGGAGGAAGATTTTCTTAGTATGGATACTACACTCTTCATTCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCGAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTAAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACATTCTATCCACAACTCCAATCTTCTGAATGGAATCCAGGTTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGCGAAATTACCTGATGGCATTACCATTAATGTCGTTAAGTATACTCAGTTGTGTCAATATCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCTGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATACGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACTGAGTTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGATACTCCTAAATTTAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAATACACCA >TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACGAGTGCGGGGTTCTAGTGCAGCTCGACTAGAACCCTGCAATGGTACTGATCCAGACCATGTTAGTAGAGCTTTTGACATCTACAACAAAGATGTTGCGTGTATTGGTAAATTCCTCAAGACGAATTGTTCAAGATTTAGGAATTTGGACAAACACGATGCCTACTACATTGTCAAACGCTGTACAAAGACCGTTATGGACCATGAGCAAGTCTGTTATAACGATCTTAAAGATTCTGGTGCTGTTGCTGAGCATGACTTCTTTACATATAAAGAGGGTAGATGTGAGTTTGGTAATGTTGCACGTAGGAATCTTACAAAGTACACAATGATGGATCTTTGTTACGCCATCAGAAATTTTGATGAAAAGAACTGTGAAGTTCTCAAAGAAATACTTGTGACAGTAGGTGCCTGCACTGAAGAATTCTTTGAAAATAAAGATTGGTTTGATCCAGTTGAAAATGAGGCCATACATGAAGTTTATGCAAAACTTGGACCCATTGTAGCCAATGCTATGCTTAAATGTGTTGCTTTTTGCGATTCGATAGTTGAAAAAGGCTATATAGGTGTTATAACACTTGACAATCAAGACCTTAATGGCAATTTCTACGATTTCGGAGATTTCGTGAAGACTGCTCCAGGTTTTGGTTGTGCTTGTGTTACATCATATTATTCTTATATGATGCCTTTAATGGGAATGACTTCATGTTTAGAGTCTGAAAACTTTGTGAAAAGTGACATCTATGGTTCTGATTATAAGCAGTATGATTTACTAGCTTATGATTTCACCGAACATAAGGAGTACCTTTTCCAAAAATACTTTAAGTACTGGGATCGCACATATCACCCAAATTGTTCTGATTGTACTAGTGACGAGTGTATCATTCATTGTGCCAATTTTAACACATTGTTTTCTATGACAATACCAATGACAGCTTTTGGACCACTTGTCCGTAAAGTTCATATTGATGGTGTACCAGTAGTTGTTACTGCAGGTTACCATTTCAAACAACTTGGTATAGTATGGAATCTTGATGTAAAATTAGACACGATGAAGTTGAGCATGACTGATCTTCTTAGATTTGTCACAGATCCAACACTTCTTGTAGCATCAAGCCCTGCACTTTTAGACCAGCGTACTGTCTGTTTCTCCATTGCAGCTTTGAGTACTGGTATTACATATCAGACAGTAAAACCAGGTCACTTTAACAAAGATTTCTACGATTTCATAACAGAGCGTGGATTCTTTGAAGAGGGATCTGAGTTAACATTAAAGCACTTTTTCTTTGCACAGGGTGGTGAAGCTGCTATGACAGACTTCAATTATTATCGCTACAATAGAGTCACAGTACTTGATATTTGCCAAGCTCAATTTGTTTACAAAATAGTTGGCAAATATTTTGAATGTTATGATGGTGGGTGCATTAGTGCTCGTGAAGTTGTTGTTACAAACTATGATAAGAGTGCTGGTTATCCTTTGAACAAATTTGGTAAAGCTAGACTTTACTACGAAACTCTTTCATATGAAGAGCAGGATGCACTTTTTGCTTTAACAAAGAGAAATGTTTTACCCACAATGACTCAAATGAATTTGAAATATGCTATTTCTGGTAAGGCAAGAGCTCGTACAGTAGGAGGAGTTTCACTTCTTTCTACCATGACTACGAGACAATACCACCAGAAGCATTTGAAGTCAATTGCTGCAACACGCAACGCTACTGTGGTTATTGGTTCAACCAAGTTTTATGGTGGTTGGGACAATATGCTTAAAAATTTAATGCGTGACGTTGATAATGGTTGTCTGATGGGATGGGACTATCCAAAGTGTGACCGTGCTCTACCTAACATGATTAGAATGGCTTCTGCCATGATATTAGGTTCTAAGCATGTTGGTTGTTGTACACATAATGATAGGTTCTATCGCCTCTCCAATGAGTTAGCGCAAGTACTCACAGAAGTTGTGCATTGCACAGGTGGTTTTTATTTTAAACCTGGTGGTACAACTAGTGGTGATGGTACTACAGCATATGCTAACTCTGCTTTTAACATCTTCCAAGCTGTTTCTGCTAATGTTAATAAGCTTTTAGGAGTTGATTCAAACGCTTGTAACAACGTTACAGTAAAATCCATACAGCGTAAAGTTTACGATAATTGTTATCGTAGTAGCAGCATTGACGAAGAATTTGTTGTTGAGTACTTTAGTTATTTGAGAAAACACTTTTCTATGATGATTTTATCTGATGATGGAGTCGTGTGCTACAACAAAGATTATGCTGACTTAGGTTATGTAGCTGACATTAATGCTTTTAAAGCAACACTTTATTACCAGAATAATGTCTTCATGTCCACTTCTAAGTGTTGGGTAGAACCAGATCTTAGTGTTGGACCACATGAATTTTGTTCACAGCATACATTGCAGATTGTTGGACCTGATGGAGACTACTACCTTCCCTATCCAGATCCGTCCAGAATTTTGTCAGCTGGTGTGTTTGTTGATGACATAGTTAAAACAGACAATGTTATTATGTTAGAACGTTACGTGTCATTGGCTATTGATGCATACCCACTTACAAAACATCCTAAGCCTGCTTATCAAAAAGTTTTTTATACTCTATTAGATTGGGTTAAACATTTACAGAAAAACTTGAATGCAGGTGTTCTTGATTCTTTTTCAGTGACAATGTTAGAGGAAGGTCAAGATAAGTTCTGGAGTGAAGAGTTTTACGCTAGCCTCTATGAAAAATCTACTGTCTTGCAAGCTGCAGGTATGTGTGTAGTATGTGGTTCGCAAACTGTACTTCGTTGTGGAGACTGTCTTAGGAGACCACTTTTATGCACGAAGTGTGCTTACGACCATGTTATGGGAACAAAGCATAAATTCATTATGTCTATTACGCCATATGTGTGTAGTTTTAGTGGTTGTAATGTCAATGATGTTACAAAGTTGTTTTTAGGTGGTCTTAGTTATTATTGTATGAACCACAAACCACAGTTGTCATTCCCACTCTGTGCTAATGGCAACGTTTTTGGTCTATATAAAAGTAGTGCGGTAGGTTCAGAGGCTGTTGAAGATTTTAACAAACTTGCAGTCTCTGACTGGACTAATGTGGAAGACTACAAACTTGCTAACAATGTCAAGGAATCTCTGAAAATTTTCGCTGCTGAAACTGTGAAAGCTAAGGAGGAGTCTGTTAAATCTGAATATGCTTATGCTGTATTAAAGGAGGTTGTCGGCCCTAAGGAAATTGTACTCCAATGGGAAGCTTCTAAGACTAAGCCTCCACTTAATAGAAATTCAGTTTTCACGTGTTTTCAGATAAGTAAGGATACTAAAATTCAATTAGGTGAATTTGTGTTTGAGCAATCTGAGTACGGTAGTGATTCTGTTTATTACAAGAGTACGAGTACTTATAAATTGACACCAGGTATGATTTTTGTGTTGACTTCTCACAACGTGAGTCCCCTTAAAGCTCCAATTTTAGTCAACCAAGAAAAGTACAATACCATATCTAAGCTCTATCCTGTCTTTAATATAGCGGAAGCCTATAATACACTGGTTCCTTACTACCAAATGATAGGTAAGCAAAAATTTACAACTATACAAGGTCCTCCTGGTAGCGGTAAATCTCATTGTGTTATAGGTTTGGGTTTGTATTACCCTCAGGCGAGAATAGTCTACACTGCATGTTCCCATGCTGCTGTAGACGCCTTATGTGAAAAAGCAGCCAAAAACTTCAATGTTGATAGATGTTCAAGGATAATACCTCAAAGAATCAGAGTTGACTGTTATACTGGCTTTAAGCCGAATAACACTAATGCGCAGTACTTGTTTTGTACTGTCAATGCTCTACCAGAAGTAAGTTGTGACATTGTTGTAGTTGATGAGGTCTCTATGTGCACTAATTATGATCTTAGTGTCATAAATAGCCGGCTGAGTTACAAACACATTGTCTATGTTGGAGACCCACAGCAGCTACCAGCTCCTAGAACTTTGATTAATAAGGGTGTACTTCAACCGCAGGATTACAATGTTGTAACCAAAAGAATGTGCACACTAGGACCTGATGTCTTTTTGCATAAATGTTACAGGTGCCCAGCCGAAATTGTTAAGACAGTCTCTGCACTTGTTTATGAAAACAAGTTTGTACCTGTCAACCCAGAATCAAAGCAATGCTTTAAAATGTTTGTAAAAGGTCAGGTTCAGATTGAGTCTAACTCTTCTATAAACAATAAGCAACTAGAGGTTGTCAAGGCCTTTTTAACACATAATCCAAAATGGCGCAAAGCTGTTTTCATCTCACCATATAATAGTCAAAATTATGTTGCTCGGCGTCTTCTTGGTTTGCAAACGCAAACTGTGGATTCCGCCCAGGGTAGTGAGTATGATTACGTCATTTACACACAGACCTCCGATACACAGCATGCTACTAATGTTAACAGATTTAATGTTGCCATTACGAGAGCAAAGGTTGGTATACTTTGTATCATGTGTGATAGAACCATGTATGAGAATCTTGATTTCTATGAACTCAAAGATTCAAAGATTGGTTTACAAGCTAAACCTGAAACTTGTGGTTTATTTAAAGATTGTTCGAAGAGCGAACAATACATACCACCTGCTTATGCAACGACATATATGAGTTTATCTGATAATTTTAAGACAAGTGATGGTTTAGCTGTTAACATCGGTACAAAAGATGTTAAATATGCTAATGTCATCTCATATATGGGATTCAGGTTTGAAGCCAACATACCAGGTTATCATACACTATTCTGCACACGAGATTTTGCTATGCGTAATGTTAGAGCATGGCTTGGCTTTGATGTTGAAGGCGCACATGTCTGTGGTGATAATGTTGGAACTAACGTACCATTACAACTTGGTTTCTCAAACGGTGTGGATTTTGTAGTGCAAACTGAAGGGTGTGTTATTACTGAAAAAGGTAATAGCATTGAGGTTGTAAAATCACGGGCACCACCGGGTGAGCAATTTGCACACTTGATCCCGCTTATGAGAAAGGGTCAACCTTGGCACATTGTTAGACGCCGTATAGTGCAGATGGTCTGTGACTATTTTGATGGCTTATCAGACATTCTGATCTTTGTGCTTTGGGCTGGTGGTCTTGAACTTACAACTATGAGGTATTTTGTTAAAATTGGAAGACCACAAAAATGTGAGTGCGGCAAAAGTGCAACTTGTTATAGTAGCTCTCAATCCGTCTATGCTTGCTTTAAGCATGCACTAGGATGTGATTATTTATACAACCCTTATTGCATTGACATACAGCAATGGGGCTACACAGGATCTTTGAGCATGAATCATCATGAAGTTTGCAACATTCATAGAAATGAGCATGTAGCTAGTGGTGATGCTATCATGACTAGATGTCTCGCTATACATGACTGTTTTGTCAAACGTGTTGATTGGTCAATTGTGTACCCCTTTATTGACAATGAAGACAAGATCAATAAAGCTGGTCGCATAGTGCAGTCACATGTCATGAAAGCTGCTCTGAAGATTTTTAACCCTGCTGCAATTCACGATGTTGGTAATCCAAAAGGCATCCGTTGTGCTACAACACCAATACCATGGTTTTGTTATGATCGTGATCCTATTAATAATAATGTTAGATGCCTGGACTATGACTATATGGTACATGGTCAAATGAATGGTCTTATGTTATTTTGGAACTGTAATGTAGACATGTACCCAGAGTTTTCAATTGTTTGTAGATTTGACACTCGTACTCGTTCTAAATTGTCTTTAGAAGGTTGTAATGGTGGTGCATTGTATGTTAATAACCATGCTTTCCACACACCAGCTTATGATAGAAGAGCTTTTGCTAAGCTTAAACCTATGCCATTCTTCTACTATGATGATAGTAATTGTGAACTTGTTGATGGACAACCTAATTATGTACCACTTAAGTCAAATGTTTGCATAACAAAATGTAACATTGGTGGTGCTGTCTGCAAGAAGCATGCTGCTCTTTACAGAGCGTATGTTGAGGATTACAACATTTTTATGCAGGCTGGTTTTACAATATGGTGTCCTCAAACTTTTGACACCTATATGCTTTGGCATGGTTTTGTTAATAGCAGAGCACTTCAGAGTCTAGAAAATGTGGCTTTTAACGTCGTTAAGAAAGGTGCCTTCACTGGTTTAAAAGGTGACTTACCAACTGCTGTTATTGCTGACAAAATAATGGTAAGAGATGGACCTACTGACAGATGTATTTTTACAAATAAGACTAGTTTACCTACTAATGTAGCTTTTGAGTTGTATGCAAAACGCAAACTTGGACTCACACCTCCATTAACAATACTTAGGAACTTAGGTGTTGTCGCAACATATAATTTTGTGTTGTGGGATTATGAAGCTGAATGTCCTTTCTCAAATTTCACTAAGCAAGTTTGTTCTTACACTGATCTTGATAGTGAAGTTGTAACATGTTTTGATAATAGTATTGCTGGTTCTTTTGAGCATTTTACTACTACAAGAGATGCAGTGCTTATTTCTAATAACGCTGTGAAAGGGCTTAGTGCCATTAAGTTACAATATGGCTTTTTGAATGATCTACCTGTAAGTACTGTTGGGAATAAACCTGTCACATGGTATATATATGTGCGCAAGAATGGTGAGTACGTCGAACAAATCGATAGTTATTATACACAGGGACGTACTTTTGAAACCTTTAAGCCTCGTAGTACAATGGAAGAAGATTTTCTTAGTATGGATACTACACTCTTCATTCAAAAGTATGGTCTTGAGGATTATGGTTTTGAACACGTTGTATTTGGAGATGTTTCTAAAACTACCATTGGTGGTATGCATCTTCTTATATCGCAAGTGCGCCTTGCGAAAATGGGTTTGTTTTCCGTTCAAGAATTTATGAATAATTCTGACAGTACACTAAAAAGTTGTTGTATTACATATGCTGATGATCCATCTTCTAAGAATGTGTGCACTTATATGGACATACTCTTGGACGATTTTGTGACTATCATTAAGAGCTTAGATCTTAATGTTGTGTCCAAAGTTGTGGATGTCATTGTAGATTGTAAGGCATGGAGATGGATGTTGTGGTGTGAGAATTCACATATTAAAACATTCTATCCACAACTCCAATCTTCTGAATGGAATCCAGGCTATAGCATGCCTACACTGTACAAAATCCAGCGTATGTGTCTCGAACGGTGTAATCTCTACAATTATGGTGCACAAGTGAAATTACCTGATGGCATTACCATTAATGTCGTTAAGTATACTCAGTTGTGTCAATATCTTAACACTACTACATTGTGTGTACCACACAAAATGCGTGTATTGCATTTAGGAGCTGCTGGTGCATCTGGTGTTGCTCCTGGTAGTACTGTATTAAGAAGATGGTTACCAGATGATGCCATATTGGTTGATAATGATTTGAGAGATTACGTTTCCGACGCTGACTTCAGTGTTACAGGTGATTGTACTAGTCTTTACATCGAAGACAAGTTTGATTTGCTCGTCTCTGATTTATACGATGGCTCCACAAAATCAATTGACGGTGAAAACACGTCGAAAGATGGTTTCTTTACTTATATTAATGGTTTCATTAAAGAGAAACTGTCACTTGGTGGATCTGTTGCCATTAAAATCACGGAGTTTAGTTGGAATAAAGATTTATATGAATTGATTCAAAGATTTGAGTATTGGACTGTGTTTTGTACAAGTGTTAACACGTCATCATCAGAAGGCTTTCTGATTGGTATTAACTACTTAGGACCATACTGTGACAAAGCAATAGTAGATGGAAATATAATGCATGCCAATTATATATTTTGGAGAAATTCTACAATTATGGCTCTATCACATAACTCAGTCCTAGATACTCCTAAATTTAAGTGTCGTTGTAACAACGCACTTATTGTTAATTTAAAAGAAAAAGAATTGAATGAAATGGTCATTGGATTACTAAGGAAGGGTAAGTTGCTCATTAGAAATAATGGTAAGTTACTAAACTTTGGTAACCACTTCGTTAATACACCA
>virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLFKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEHLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICHAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHSTNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPTPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYNFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDCENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHYVIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCGADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPHKLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFIAATLKCPCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQYAGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAVHDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYDVVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVLGSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDDVVTPGEGHIVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSKMSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICLKNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYRCMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFSTFKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPKDNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITRVMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDTLAEQGVELEGYFIYDTCGGFDINNPDGVMISQYDLNSAVDVKSDSDASVEDTSSISDNEDVEQIEKENVSAADVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKTTNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQGDSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQINMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCVDGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQSPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKLTKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDGKILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTEDTVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSNAAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDFLVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETFTGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVAITSLIGPVVGDVIDATGYICYTGLNSRGHYTYYDNLNSLMVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESHTARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYLLVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHFFYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWDYKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINFESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVHANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECSDGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFSQLIGRPIKIVNSELLEDLSVDFKGSLFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVTFSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLTQRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPKKGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGAKLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGFIIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLYTPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYDNELSGVRLHKFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLESYNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAITTFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDMQGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLCLVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFCCYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGERNIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKLLALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKNDVSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHYAGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAVKASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDPAKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEHPAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSYLNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVVKRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNCYRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNNVFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGADGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDGQDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIGSEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVGPKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTKLTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRIRVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYENKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQNYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCDRKMYDNLDFYELKDSKVGLQAKPEACGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGLAVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDNIGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQCVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCATTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKANVCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQSLENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISGSFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKGLDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENMSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP >FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATIDQSYLKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVVKRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKDGRCEFGNVARKDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACDESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLEAENFVKSDIYGSDYKHYDLLAYDFTDHKEKLFQKYFKHWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEASMTDFNYYRYNRVTVLDICQAQFVYKVVCKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMVLGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNCYRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADIAAFKATLYYQNNVFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDVVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDGQDKFWSEEFYASLYEKSTVLQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSTVDQSYLNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFNYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYDNKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVVGPKEIVLQWEASKIKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMICDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQAKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYVVKRCTKSVMDHEQVCYNDLKDSGVVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTTPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGADYKQYDLLAYDFTDHKEKLFQKYFKHWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPSTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSSALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLISTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELFKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARMNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKDYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTVPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIPGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFSHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRIDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVMSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWYPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHYVIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCGADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPHKLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFIAATLKCPCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQYAGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAVHDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYDVVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVLGSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDDVVTPGEGHIVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSKMSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICLKNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYRCMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFSTFKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPKDNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITRVMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDTLAEQGVELEGYFIYDTCGGFDINNPDGVMISQYDLNSAVDVKSDSDASVEDTSSISDNEDVEQIEKENVSAADVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKTTNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQGDSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQINMCKFASVEGSGVFVHDR-IEKRTPVSHFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCVDGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQSPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKLTKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDGKILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTEDTVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSNAAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDFLVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETFTGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVAITSLIGPVVGDVIDATGYICYTGLNSRGHYTYYDNLNSLMVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESHTARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYLLVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHFFYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWDYKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINFESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVHANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECSDGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFSQLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVTFSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLTQRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPKKGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGAKLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGFIIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLYTPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYDNELSGVRLHNFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLESYNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAITTFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDMQGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLCLVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFCCYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGERNIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKLLALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKNDVSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHYAGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAVKASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDPAKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEHPAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSYLNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVVKRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNCYRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNNVFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDGQDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSALGSEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVGPKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTKLTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRIRVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYENKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQNYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCDRKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGLAVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDNIGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQCVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCATTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKANVCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQSLENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISGSFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKGLDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENMSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP >TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPIRDVLQEIKYCYRNGFEGYVFVPEYCRDLVDCDRKDHYVIGVLGNGISDLKPVLLTEPSVMLQGFIVRASCNGVLEDFDLKIARTGRGAIYVDQYMCGADGKPVIEGDFKDYFGDEDVIEFEGEDYHCAWTVVRDEKPLNQQTLFTIQEIQYNLDIPHKLPNCATRHVAPPVKKNSKIVLSEDYRKLYDIFGSPFMGNGDCLSKCFDTLHFIAATLRCPCGSESSGVGDWTGFKTACCGLSGKVKGVTLGDVKPGDAVVTSMSAGKGVKFFANCVLQHAGDVENVSIWKVIKTFTVDETVCTPDFEGELNDFIKPESKSPTACSIKRAFITGEIDDAVHDCIITGKLDLSTNLFGNVGLLFKKTPWFVQKCGALFVDAWKVVEELCSSLKLTYKQIYEVVASLCTSAFTIVNYKPTFVVSDNRVKDLVDKCVKVLVKAFDVFTQTITIAGIEAKCFVLGAKYLLFNNALVKLVSVKILGKKQKGLESAFFATSLVGATVNVTPKRTETANISLNKVDDVAAPGEGYIVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYDVDDDTKSKMIAKLGSSFEYDGDIDAAIVKVNELLIEFKQQNLCFRALKDDESIFVEAYLKKYKMPACLAKHIGLWNIIKQDSCKKGFLSLFNHLNELEDVKETNVQAIKDILCPDLLLDLDYGAIWYKCMPSCSDLSVLGSVQLLIGNGVKVVCDGCKVFANQLSNGYNKLCNAARTDIEIGGIPFSTFKTPTNTFIEMTDAIYSVIEQGKALSFGNADVPVLDNGTISTDDWSEPILLEPAEYVKPKNNGNVIVIAGYTFYKDEDEHFYPYGSGKIVQRMYNKMGGGDKTVSFSEEVDVQEIAPVTRVKLEFEFDNEIVTGVLEQAIGTRYKFTGTTWEEFEDSISEELDAIFDTLANQGVELEGYFIYDTCGGFDIKNPDGIMISQYDINNIADEKSETGASSEEEEVESVEEDAENEIEASDCVEETSSQEDVETVEVEDVTSTEEDV----EIVEVSAKDDPWAAAVDVQEAEQIKPSLPPFKTTNLNGKIILKQQDNNCWINACCYQLQAFDFFNNEAWEKFKKGDVMDFVNLCYAATTLERGHSGDAEYLLELMLNDYSTAKIVLAARCGCGEKEIVLERTVFKLSPLRNDFKYGVCGDCMQINNAGVVECLKDLVYLSMIEWKNARPVSDFIVKPIMHAVYIGSTQSGHYMIDDCEHGYCVDGMGIKPCKGKLYTSTLFINANVMTRVEKPKQQSKVEKVEQQPEIEEKKPSIEKEEFQSPKNDDLILPFYKAGKLSFYQGDLDVLINFLEPDVIVNAANGDLKHMGGVARAIDVFTGGKLTVRSKDYLKKNKSIAPGNAVFFENVIEHLSVLNAVGPRNGDSRVEAKLNNVYKAIAKCEGKILTPLISVGIFNVKLETSLQCLLKTVNDRELNIFVYTDQERQAVENFFSGSIPVKVTEDNVNHERVSVSFDKTYGEQLKGTVVIKDKDVTNQLPSAFDVGQKVVKAIDLDWQAHYGFHDAAAFSASSHDAYKFEVVTHSNFIVHKQTDNNCWINAICLALQRLKPQWKFPGVRGLWNEFLERKTQGFVHMLYHISGVKKGEPGDAELTLHKLGDLMDNDCEIIVTHTTACDKCAKVEKFTGPVVAAPLAIHGTDETCVHGVSVNVKVTQIKGTVAITSLSGPIIGEVLEATGYICYRGSSKNGHYTYYDNRNGLMIDAEKAYHFNKDLLQVTTAIASNFVVKKPQVEEKPK---------TRVFNRIEESPKVIVQEQKLLAIESGADYALTEFGRYADMFFMAGDKILRFLLEVFKYLLVLFMCLRSTKMPKVKVKPPHAFKDLGAKVRTLNYMRQLNKPSVWRYAKLVLLLIAIYNFFYLFVSIPVVHKLACNGAVQAYKNSSFVKSEVCGNSILCKACLASYDELADFQHLQVTWDFKSDPLWSRLVQLSYFAFLAVFGNNYVRCVLMYFVSQYLNLWLSYFGYVEHSWFLHVVNFESISAEFVIIVIVVKAVLVLKHIVFSCSNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVHANGTGKLCKKHNFYCKNCDSYGFENTFICDEIVRDLSNSVKQTVYATDRSHHEVTKVECSDGFYRFYVGDEFTSYDYDVKHKKYSSQEVLKNMLLLDDFIVYSPSGSSLANVRNACVYFSQLIGKPIKIVNSDLLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLDECYRACNLDVSFSTFEMAVNNAHRFGVLITDRSFNNFWPSKVKPGSAGVSAMDIGKCMTSDAKIVNAKVLTQRGKSVVWLSQDFAALSSTAQKVLVKTFVEEGVNFSLTFNAVGSDDDLPYERFTESVPPKSGSGFFDVIKQLKQIMMLILAFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGSAVSKDSYFDTCVFNAACTTLTGLGGTIIYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGYICGNSVLGFFKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAACYGVLKFKKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSYETIVNSTPIERIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQSGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGTLYFVYMHHLELGNGSHVGSNLEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNLQAGKVTSFFYPIMTAMTILFAFWLEFFMYTPFTWINPTFVSIVLAVTTLVSTVFVSGIKHKMLFFMSFVLPSVILVTAHNLFWDFSYYESLQSIVENTNTMFLPVDMQGIMLTVFCFIVFVTYSVRFFTCKQSWFSLAVTTVLVIFNMVKIFGTSDEPWTENQIAFCFVNMLTMIVSLTTKDWMVVVASYRIAYYIVVCVMPSAFVSDFGFMKCISIVYMACGYLFCCYYGILYWVNRFTCMTCGVYQFTVSAAELKYMTANNLSAPKNAYDAMILSAKLIGVGGKRNIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEIVLEKLLALIAFFLSKHNTCDLSELIESYFENTTILQSVASAYAALPSWIALEKARADLEEAKKNDVSPQILKQLTKAFNIAKSDFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIISAMHSLLFGMLKKLDMSSVNTIIDQARNGVLPLSIIPAASATRLVVVTPSLEVFSRIRQENNVHYAGAIWTIVEVKDANGSHVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKERAVKASSTLDGEAFGSGKALMAAESGKSFMYAFIASENNLKYVKWESNNDIIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSSLLTLCAFAPDPAKAYVDAVKRGMQPVNNCVKMLSNGAGNGMAITNGVEANTQQDSYGGASVCIYCRCHVEHPAIDGLCRYKGKFVQIPTGTQDPIRFCIENEVCVVCGCWFNNGCMCDRTSMQSSTVDQSYLKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFNYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGVVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMDHKPQLSFPLCANGNVFGLYKSSAVGSEDVEDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAILKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKATILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTQRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKNEQYIPPAYATTYMSLSDNFKTSDGLAVNIGIKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQCVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSSCELVDGQLNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNMFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFAGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTKDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMTNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVRLPDGITTNVVKYTQLCQYLNTTTVCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP >28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHYVIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCGADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPHKLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFVAATLKCPCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQYAGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAVHDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYDVVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVLGSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDDVVTPGEGHIVIVGDMAFYKSREYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSKMSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICLKNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYRCMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFSTFKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPKDNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITRVMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDALAEQGVELEGYFIYDTCGGFDINNPDGVMISQYDLNSAVDVRSDSDASVEDTSSISDNEDVEQIEKENVSAADVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKTTNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQGDSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQINMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCVDGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQSPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKLTKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDGKILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTEDTVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSNAAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDFLVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETFTGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVVITSLIGPVVGDVIDATGYICYTGLNSRGHYTYYDNLNSLLVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESHTARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYLLVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHFFYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWDYKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINFESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVHANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECSDGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFSQLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVTFSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLTQRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPKKGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGAKLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGFIIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLYTPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYDNELSGVRLHKFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLESYNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAITTFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDMQGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLCLVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFCCYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGERNIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKLLALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKNDVSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHYAGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAVKASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDPAKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEHPAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSYLNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVVKRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNCYRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNNVFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGADGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDGQDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIGSEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVGPKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTKLTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRIRVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYENKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQNYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCDRKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGLAVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDNIGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQCVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCATTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKANVCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQSLENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISGSFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKGLDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENMSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP >TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDERNCEVLKEILVIVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDMMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATCNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRLIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVRAFLTHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGIKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTIGNKPVTWYMYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGAYGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDRAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSTVDQSYLNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNIARRDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTVPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSEIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHLGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMFTSKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELFKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEIFVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTVPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELILKHFFFAQGGGAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEDFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNCCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQINKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKASILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQIIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNADRCSRIIPQRVRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDKTIYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSGGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGVHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSAQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSINHHDVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPTAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNVVKGLSAIKLQYGFLNDLPVSTVGNKLVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIREKLSLGGSVAIKVTEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGISYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTT >27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHYVIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCGADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPHKLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFIAATLKCPCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQYAGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAVHDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYDVVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVLGSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDDVVTPGEGHVVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSKMSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICLKNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYRCMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFSTFKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPKDNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITRVMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDTLAEQGVELEGYFIYDTCGGFDINNPDGVMISQYDLNSAVDVKSDSDASVEDTSSISDNEDVEQIEKENVSAADVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKTTNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQGDSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQINMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCVDGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQSPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKLTKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDGKILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTEDTVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSNAAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDFLVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETFTGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVAITSLIGPVVGDVIDATGYICYTGLNSRGHYTYYDNLNSLMVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESHTARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYLLVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHFFYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWDYKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINFESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVHANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECSGGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFSQLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVTFSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLTQRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPKKGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGAKLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGFIIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLYTPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYDNELSGVRLHNFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLESYNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAITTFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDMQGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLCLVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFCCYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGERNIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKLLALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKNDVSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHYAGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAVKASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDPAKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEHPAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSYLNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVVKRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNCYRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNNVFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAFQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDGQDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIGSEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVGPKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTKLTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRIRVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYENKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQNYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCDRKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGLAVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDNIGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQCVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCATTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRIRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKANVCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQSLENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISGSFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKGLDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWHPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENMSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP >26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHYVIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCGADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPHKLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFIAATLKCPCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQYAGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAVHDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYDVVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVLGSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDDVVTPGEGHVVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSKMSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICLKNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYRCMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFSTFKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPKDNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITRVMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDTLAEQGVELEGYFIYDTCGGFDINNPDGVMISQYDLNSAVDVKSDSDASVEDTSSISDNEDVEQIEKENVSAADVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKTTNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQGDSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQINMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCVDGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQSPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKLTKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDGKILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTEDTVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSNAAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDFLVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETFTGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVAITSLIGPVVGDVIDATGYICYTGLNSRGHYTYYDNLNSLMVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESHTARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYLLVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHFFYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWDYKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINFESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVHANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECSGGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFSQLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVTFSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLTQRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPKKGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGAKLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGFIIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLYTPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYDNELSGVRLHNFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLESYNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAITTFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDMQGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLCLVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFCCYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGERNIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKLLALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKNDVSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHYAGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAVKASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDPAKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEHPAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSYLNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVVKRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNCYRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNNVFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAFQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDGQDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIGSEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVGPKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTKLTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRIRVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYENKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQNYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCDRKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGLAVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDNIGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQCVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCATTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRIRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKANVCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQSLENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISGSFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKGLDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWHPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENMSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP >TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDERNCEVLKEILVIVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDMMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRLIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVRAFLTHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGIKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTIGNKPVTWYMYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGAYGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDRAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLFKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYRLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGLLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVVGPKEIVLQWEASKIKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMICDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQAKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEHLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICHAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLFKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEHLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICHAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHSTNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPTPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYNFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPFRNALQEIKYCYRNGFEGYVFVPEYRRDLVDCDRKDHYVIGVLGNGISDLKPVLLTEPSVMLQGFIVRAGCNGVLEDFDLKIARTGNGAIYVDQYMCGADGKPVIEGEFKDYFGDEDVIIYEGEEYHCAWLTVRDEKPLCQQNLLTIREIQYNLDIPHKLPNCAIREVAPPVKKNSKVVLSEEYKKLYDIFGSPFMGNGDSLNKCFDSLHFVAATLKCPCGAESSGVGDWTGFKTACCGLQGKVKGVTLGAVKPGDAVVTSMSAGKGVKFFANSVLQYAGDVENVSVWKVIKTFTVNETVCTADFEGELNDFIKPESTSPVSCSIKRAFITGEVDDAVHDCIISGKLDLSTNLFGGANLLFKKTPWFVLKCGAIFADAWKVVEELLCSLKLTYKQIYDVVASLCTSAFTIMDYKPVFVVASNSVKDLVDKCVKILVKAFDVFTQTITIAGVEAKCFVLGSKYLLFNNALVKLVSVKILGKRQKGLDSAFFATNLIGATVKVTPQRTEAANISLNKVDDVVTPGEGHIVIVGDMAFYKSEEYYFMMASPDSVLINNVFKAARVPSYNIVYNVDDDTKSKMSSKIGTPFEFDGDVDAAIVKINDLLVEFRQEKFCFRALKDGESILVEAYLKKYKMPICLKNHVGLWDIIRRDSDKKGFLDTFSHLNELEDVKDVKIQSIKNILCPDLLLELDFGAIWYRCMPACSDVSILGNVKIMLGNGVKVICDGCHGFANRLTVNYSKLCDTARKDIEIGGIPFSTFKTPSSSFIDMKDAIYSVVEYGEAFSFKTASVPVTNSGTVKNDDWSDPILLEPADYVEPKDNGDVIVIAGYTFYRDENDHFYPYGSGMVVQKMYNKMGGGDKSVSFSDNVNVKEIEPITRVMLEFEFDNEVVTQVLEKVIGAKYKFTGTTWEEFEDSISEKLDKVFDALAEQGVELEGYFIYDTCGGFDINNPDGVMISQYDLNSAVDVRSDSDASVEDTSSISDNEDVEQIEKENVSAADVTVVDVEEFVEQVSLVDTEEQLPSVEEKVEGSAKDDPWAAAVDEQEAEQPKPSLTPFKTTNLNGRIILKQQDNNCWINACCYQLQAFDFFNHELWDGFKKDDVMPFVNFCYAALTLKQGDSGDSEYLLETMLNDYSTAKVVLSAKCGCGVKEIVLERTVFKLTPLKNEFKYGVCGDCKQINMCKFASVEGSGVFVHDR-IEKRTPVSQFIVTPIMHAVYTGTTQSGHYMIEDCTHDYCVDGMGVKPRKQKFYTSTLFLNANVMT-------------ADSKTTIEPTAPVKDKLVEECQSPKDFILPFYTAGKVSFYQGDLDVLINLLEPDVVVNAANGDLRHMGGVAKAIDVFTGGKLTKRSKEYLRTNKTIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDGKILTPLISVGIFKVKLEVSLQCLLKTVTDRELNVFVYTDQERITIENFFNGTIPVKVTEDTVNQKRVSVALDKTYGEQLKGTVVIKDKDVTNQLPSVSDVGEKVVKALDVDWNAYYGFSNAAAFSASSHDAYIFEVVTHNNFIVHKQTDNNCWVNAICLALQRLKPTWKFPGVKSLWDDFLVRKTAGFVHMLYHISGLKKGQPGDAELTLHKLGELMLSDSAVTITHTTACDKCAKTETFTGPVIAAPLLIHGTDETCVHGVSVNVKVTSVRGTVVITSLIGPVVGDVIDATGYICYTGLNSRGHYTYYDNLNSLLVDAEKAYHFEKNLLQVTTAIASNFIAYTPKSEIYPKVQPVKESHTARVFSEVEEIPKNVVRETKLLAIESGADYTLSTLGKYADVFFMTGDKILRFLLEVFKYLLVVFMCLRKSKMPKVKVKPPHVFKNLGAKVRTLNYVRQLNKPALWRYVKLVLLLIALYHFFYLFVSIPVMHKLVCSSSVQAYSNSSFVKSEVCGNSILCKACLASYDELADFDHLQVSWDYKSDPLWNRVIQLSYFTFLVVFGNNYVRCLLMYFISQYLNLWLSYFGYVKYSWFLHVINFESISVEFVIIVVVFKAVLALKHIFFSCNNPSCKTCSKIARQTRIPIQVVVNGSMKTVYVHANGTGKLCKKHNFYCKNCDSYGFDHTFICDEIVRDLGNSIKQTVYATDRSYQEVTKVECSDGFYRFYVGDEFTAYDYDVKNKKYSSQEVLKTMFLLDDFIVYSPSGSSLASVRNVCVYFSQLIGRPIKIVNSELLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLEECYKACNLDVTFSTFEMAVNNAHRFGILITDRSFNNFWPSKIKPGSSGVSAMDIGKCMTFDAKIVNAKVLTQRGKSVVWLSQDFSTLSSTAQKVLVKTFVEEGVNFSLTFNAVGSDEDLPYERFTESVSPKKGSGFFDVLKQLKQIFWCLVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKNSYFDTCVFNAACTTLSGLGGTIVYCAKQGLVDGAKLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECVESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLSYPGILDAGFIIAYVNMAPWYVLVLYIVVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDVLYTPPTVSVNSTLQSGLRKMAQPSGIVEPCIVRVAYGNNVLNGLWLGDEVICPRHVIASDTSRVINYDNELSGVRLHKFSIAKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSVKSGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNLEGVMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNASMTLESYNVWAKTNSFTELVSTDAFNMLAAKTGYSVEKLLECIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNLQSGKVKSLFYPVLTAMAILFAFWLEFFMYTPFTWINPSFISVILAITTFFSVLLVVGIKHKMLFFMSFVMPSVVLATVHNVVWDMTYYESLQALVANTNTTFLPVDMQGVMLALFCVVVFVTYTIRFFTCKQSWFSLFVTTVFVVFNIVKLLGMVGEPWTEDHILLCLVNMLTMLISLTTKDWFVVFVSYKFAYYVVVYVMQPSFVQDFGFIKCVSVIYMACGYLFCCYYGILYWVNRFTCMTCGVYQFTVSPAELKYMTANNLSAPKTAYDAMILSVKLMGIGGERNIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEVVLEKLLALIAFFLSKHNTCDLSDLIDSYFDNTTILQSVASAYAALPSWIAYEKARADLEEAKKNDVSPQLLKQLTKACNIAKSEFERESSVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIEQARNGVLPLSIIPAAAATRLIVVTPNIEVLSKIRQENNVHYAGAIWSIIEVKDANGAQVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKEKAVKASATIDGDAYGSGKALMASESGKSFIYAFIASDSNLKYVKWESNNDVIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSGLLTLCAFAPDPAKAYVDAVKRGMQPVTNCVKMLSNGAGNGMAITNGVESNTHQDSYGGASVCIYCRCHVEHPAIDGLCRYKGKFVQVPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQGTTVDQSYLNRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKRDAYYVVKRCTKSVMDHEQVCYNDLKDSGAVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTDHKEKLFEKYFKHWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTIPNTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVCKYFDCYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDAIFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGTTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMVLGSKHIGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYIKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNTCNNVTVKSIQRKIYDNCYRSSSVDDDFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADISAFKATLYYQNNVFMSTAKCWVEPDLNVGPHEFCSQHTLQIVGADGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYALLDWVKHLQKTLNAGILDSFSVTMLEDGQDKFWSEEFYASLYEKSTVLQAAGMCIVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSYNGCTVNDVTKLFLGGLNYYCTEHKPQLSFPLCANGNVFGLYKSSAIGSEDVDDFNKLAISDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKAEYAYAILKEVVGPKEVVLQWESSKVKPPLNRNSVFTCFQLNKDTKIQLGEFVFEQSEYGSESVYYKSTSTTKLTPGMIFVLTSHNVSPLKANILVNQEKYNTISKLYPTFNIAEAYTTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKASKNFNVDKCSRIIPQRIRVDCYMGFKPNNTNAQYLFCTVNALPEANCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGTLQPEDYNVVTQRMCKLGPDVFLHKCYRCPAEIVKTVSALVYENKFLPVNPESKQCFKMFVKGQVQIESNSSINNKQLDVVKAFLAHNPKWRKAVFISPYNSQNYVAKRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHAINVNRFNVAITRAKVGILCIMCDRKMYDNLDFYELKDSKVGLQAKPETCGLFKDCSKTDQYIPPAYATTYMSLSENFKTSDGLAVNIGTKDVKYANVISYMGFRFEANVPGYHTLFCTRDFAMRNVRSWLGFDVEGAHVCGDNIGTNVPLQLGFSNGVDFVVQTEGCVVTEKGNSIEVVKARAPPGEQFAHLIPLMRKGQSWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCDCGKIATCYNSSQCVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIYDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMRTALKVFNPAAIHDVGNPKGIRCATTSIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDESDCEFIDGQPNYVPLKANVCITKCNIGGAVCKKHAALYRAYVEDYNTFIQAGFTIWCPQNFDTYMLWQGFVNSKALQSLENVAFNVVKKGAYADLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATHKFVLWDYEAECPFSNFTKQVCAYTDLDGEVVTCFDNSISGSFERFTTTKDAVLISNNAVRGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFFSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMSNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIVKGLDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGANGVAPGTTVLRRWLPDDAILVDNDMRDYVSDADFSVTGDCTNLYIEDKFDLLISDLYDGSTKSIDGENMSKDGFFTYINGFINEKLALGGSVAIKITEFSWNKSLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALVVNLKERELNDMVIGLLRKGKILIRNNGKLLNFGNHFVNTP >TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKAGILCIMCDRPMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAERPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTRDAVLISNNAVKGLSAIKLQYGLLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYVVKRCTKSVMDHEQVCYNDLKDSGVVAEHDFFLYKEGRCEFGNVARKDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACNESFFENKDWFDPVENEAIHEVYARLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTTPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGADYKQYDLLAYDFTDHKEKLFHKYFKHWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPSTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1 MSSKQFKILVNEDYQVNVPSLPIRDVLQEIKYCYRNGFEGYVFVPEYCRDLVDCDRKDHYVIGVLGNGISDLKPVLLTEPSVMLQGFIVKAICNGALEDFDLKIARTGRGAIYVDQYMCGADGKPVIEGDFKDYFGDEDIIEFEGEEYHCAWTTVRDEKLLNQQTLFTIQEIQYNLDIPHKLPNCATRHVAPPVKKNSKIVLSEDYKKLYEIFGSPFMGNGDCLSKCFDTLHFIAATLRCPCGAESSGVGDWTGFKTACCGLVGKVLGVTLGDIKPGDAVVTSMSAGKGVKFFANCVLQHAGDVENVSVWKVIKTFTVDETVCTPDFEGELNDFIKPESKSPTACSIKRAFITGEIDDAVHDCIITGKLDLSTNLFGNVGLLFKKTPWFVQKCGALFVDAWKVVEELLGSLKLTYKQIYEVVASLCTSAFTIVNYKPTFVVLDNRVKDLVDKCVNILVKAFDVFTQTITIAGIEAKCFVLGAKYLLFNNALVKLVSVKILGKKQKGLESAFFATSLVGATVNVTPKRTETATISLNKVDDVVAPGEGYIVIVGDMAFYKSGEYYFMMASPDSVLINNVFKAARVPSYDIVYDVDDDTKGKMTAKLGSSFEYDGDIDAAVTKVNELLIEFKQQSLCFRALKDDKSIFVEAYLKKYKMPACLAKHIGLWNIIKKDSCKKGFLSLFNHLNELEDVKETNVQAIKNILCPDLLLDLDYGAIWYKCMPSCSDLSVLGSVQLLIGNGVKVVCDGCKVFANQLSNGYNKLCNAARTDIEIGGIPFSTFKTPTNTFIEMTDAIYSVIEQGKALSFGNADVPVLDNGTISTDDWSEPILLEPAEYVKPKNNGNVIVIAGYTFYKDEDEHFYPYGSGKIVQRMYNKMGGGDKTVSFSEEVDVQEIAPVTRVNLEFEFDNEIVTGVLEQAIGTRYKFTGTTWEEFEDSISEELDAIFDTLANQGVELEGYFIYDTCGGFDFKNPDGIMISQYDINNIADEKSETGASSEEEEVESVEEDAENEIVEASEAIEETSSQEEVETVEVEDITSAEDV----EIVEVSAKDDPWAAAVDVQEAEHVKPSLPPFKTTNLNGKIILKQQDNNCWINACCYQLQAFDFFNNEAWEKFKKGDVMDFVNLCYAATTLERGHSGDAEYLLELMLNDYSTAKIVLVAKCGCGEKEIVLERTVFKLTPLKDEFNYGVCGECMQINRCKVASVEGSGLFVHDC-IDKQTPTSQFIVKPIMHAVYTGTTQNGHYMVDDIEHDYCVDGMGIKPRKKRLYTSTLFINANVMTRVEKPKQQPKVEKVEQQPEIEEKKPSIEKEEVQSPKNDDLILPFYKAGKLSFYQGDLDVLINFLEPDVIVNAANGDLKHMGGVARAIDVFTSGKLTERVMDYLKKNKSIAPGNAVFFENVIENLSVLNAVGPRNGDSRIEGKLNNVYKAIAKCEGKILTPLISVGIFSVKLEMSLQCLLKTVNDRELNVFVYTDQERQAIENFFSGSIPVKVTEDNVNHERVSVSFDKTYGEQLKGTVVIKDKDVTNQLPSAFDVGQKVVKAIDVDWQAHYGFHDAAAFSASSHDAYKFEVVTHSNFIVHKQTDNNCWINAICLALQRLKPQWKFPGVRGLWNEFLERKTQGFVHMLYHISGVKKGEPGDAELTLHKLGDLMDNDCEIIVTHTTACDKCSKVEKFTGPVVAAPLAIHGTDETCVHGVSVNVKVTQIKGTVAITSLIGPIIGEVLEATGYICYRGSSKNGHYTYYDNRNGLMIDAEKAYHFNKDLLQVTTAIASNFVVKKPQVEEKPK---------TRVFNRVDEPPKTIVQEQKLLAIESGADYALTEFGRYADMFFMAGDKILRFLLEVFKYLLVLFMCLRSTKMPKVKVKPPHAFKDLGAKVRTLNYMRQLNKPAVWRYAKLVLLLIAIYNFFYLFVSIPVVHKLTCSGAVQAYKNSSFVKSEVCGNSILCKACLASYDELADFQHLQVAWDFKSDPLWNKLVQLSYFVFLAVFGNNYVRCFLMYFVSQYLNLWLSHFGYVEHSWFLHVVSFESISAEFVIIVILVKAVLALKHIVFSCSNPSCKTCSKTARQTRIPIQVVVNGSMKTVYVHANGTGKLCKKHNFYCKNCDSYGFENTFICDEIVRDLSNSVKQTVYATDRSHQEVTKVECSDGFYRFYVGDEFTSYDYDVKHKKYSSQEVLKNMLLLDDFIVYSPSGSSLANVRNACVYFSQLIGKPIKIVNSDLLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLDECYKACNLDVSFSTFEMAVNNAHRFGILITDRSFNNFWPSKVKPGSSGVSAMDIGKCMTSDAKIVNAKVLTQRGKSVVWLSQDFAALSSTAQKVLVKTFVEEGVNFSLTFNAVGSDDDLPYERFTESVPPKSGSGFFDVIKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLENMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDKEFGNGYICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKFKKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGVLDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQSGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVFCPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSAKYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDCIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNLQAGKVKSFFYPIVTAMTILFAFWLEFFMYTPFTWINPAFVSFVLAVTTLVSTVFVSGIKHKMLFFMSFVLPSVVLVTAHNLFWDFSYYESLQSIVENTNTMFLPVDMQGVMLTVFCFIVFVTYSVRFFTCKQSWFSLAVTTVLVIFNMFKIFGTSDEPWTENQIAFCFVNMLTMIVSLTTKDWVVVVASYRVAYYIVVCVMPAAFVSDFGFMKCISIVYMACGYLFCCYYGILYWVNRFTCMTCGVYQFTVSAAELKYMTANNLSAPKNAYDAMILSAKLIGVGGKRNIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEIVLEKLLALIAFFLSKHNTCDLSELIESYFENTTILQSVASAYAALPSWIAFEKRRADLEEAKKNDVSPQILKQLTKAFNIAKSDFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKVVSAMHSLLFGMLKKLDMSSVNTIIDQARNGVLPLSIIPAASATRLVVVTPSLEVFSRIRQENNVHYAGAIWTIVEVKDANGSHVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKERAVKASAILDGEAFGSGKALMAAESGKSFMYAFIASDNNLKYVKWESNNDIIPIELEAPLRFYVDGVNGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSSLLTLCAFAPDPAKAYVDAVKRGMQPVNNCVKMLSNGAGNGMAITNGVEANTQQDSYGGASVCIYCRCHVEHPAIDGMCRYKGKFVQIPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQSSTVDQSYLKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNIARRDLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDAIVEKGYIGIITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSEIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDDCIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLTMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGVTYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCINAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHSDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKIYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLNVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDVTKLFLGGLSYYCMDHKPQLSFPLCANGNVFGLYKSSAVGSEDVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAILKEVIGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKATILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTQRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINHKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRSMYDNLDFYELKDSKIGLQAKPETCGLFKDCSKNEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKARAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGKPQKCECGKTATCYSSSQCVYACFKHALGCDYLYTPYGIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEEKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLEYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNMFMQAGFTIWCPQNFDTYMLWHGFVNSKALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVREGPTDKCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFERFTTTKDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMTNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSQIKTFYPQLQSAEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITTNVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLISDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSAAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCEKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVVGLLRKGKLLIRNNGKLLNFGNHLVNVP >TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTLGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVVGPKEIVLQWEASKIKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMICDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYKFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQAKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP >TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKRVRGSSAARLEPCNGTDPDHVSRAFDIYNKDVACIGKFLKTNCSRFRNLDKHDAYYIVKRCTKTVMDHEQVCYNDLKDSGAVAEHDFFTYKEGRCEFGNVARRNLTKYTMMDLCYAIRNFDEKNCEVLKEILVTVGACTEEFFENKDWFDPVENEAIHEVYAKLGPIVANAMLKCVAFCDSIVEKGYIGVITLDNQDLNGNFYDFGDFVKTAPGFGCACVTSYYSYMMPLMGMTSCLESENFVKSDIYGSDYKQYDLLAYDFTEHKEYLFQKYFKYWDRTYHPNCSDCTSDECIIHCANFNTLFSMTIPMTAFGPLVRKVHIDGVPVVVTAGYHFKQLGIVWNLDVKLDTMKLSMTDLLRFVTDPTLLVASSPALLDQRTVCFSIAALSTGITYQTVKPGHFNKDFYDFITERGFFEEGSELTLKHFFFAQGGEAAMTDFNYYRYNRVTVLDICQAQFVYKIVGKYFECYDGGCISAREVVVTNYDKSAGYPLNKFGKARLYYETLSYEEQDALFALTKRNVLPTMTQMNLKYAISGKARARTVGGVSLLSTMTTRQYHQKHLKSIAATRNATVVIGSTKFYGGWDNMLKNLMRDVDNGCLMGWDYPKCDRALPNMIRMASAMILGSKHVGCCTHNDRFYRLSNELAQVLTEVVHCTGGFYFKPGGTTSGDGTTAYANSAFNIFQAVSANVNKLLGVDSNACNNVTVKSIQRKVYDNCYRSSSIDEEFVVEYFSYLRKHFSMMILSDDGVVCYNKDYADLGYVADINAFKATLYYQNNVFMSTSKCWVEPDLSVGPHEFCSQHTLQIVGPDGDYYLPYPDPSRILSAGVFVDDIVKTDNVIMLERYVSLAIDAYPLTKHPKPAYQKVFYTLLDWVKHLQKNLNAGVLDSFSVTMLEEGQDKFWSEEFYASLYEKSTVLQAAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFSGCNVNDVTKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDYKLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVVGPKEIVLQWEASKTKPPLNRNSVFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYYPQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCTVNALPEVSCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQPQDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKGQVQIESNSSINNKQLEVVKAFLTHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSAQGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRTMYENLDFYELKDSKIGLQAKPETCGLFKDCSKSEQYIPPAYATTYMSLSDNFKTSDGLAVNIGTKDVKYANVISYMGFRFEANIPGYHTLFCTRDFAMRNVRAWLGFDVEGAHVCGDNVGTNVPLQLGFSNGVDFVVQTEGCVITEKGNSIEVVKSRAPPGEQFAHLIPLMRKGQPWHIVRRRIVQMVCDYFDGLSDILIFVLWAGGLELTTMRYFVKIGRPQKCECGKSATCYSSSQSVYACFKHALGCDYLYNPYCIDIQQWGYTGSLSMNHHEVCNIHRNEHVASGDAIMTRCLAIHDCFVKRVDWSIVYPFIDNEDKINKAGRIVQSHVMKAALKIFNPAAIHDVGNPKGIRCATTPIPWFCYDRDPINNNVRCLDYDYMVHGQMNGLMLFWNCNVDMYPEFSIVCRFDTRTRSKLSLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYYDDSNCELVDGQPNYVPLKSNVCITKCNIGGAVCKKHAALYRAYVEDYNIFMQAGFTIWCPQTFDTYMLWHGFVNSRALQSLENVAFNVVKKGAFTGLKGDLPTAVIADKIMVRDGPTDRCIFTNKTSLPTNVAFELYAKRKLGLTPPLTILRNLGVVATYNFVLWDYEAECPFSNFTKQVCSYTDLDSEVVTCFDNSIAGSFEHFTTTRDAVLISNNAVKGLSAIKLQYGFLNDLPVSTVGNKPVTWYIYVRKNGEYVEQIDSYYTQGRTFETFKPRSTMEEDFLSMDTTLFIQKYGLEDYGFEHVVFGDVSKTTIGGMHLLISQVRLAKMGLFSVQEFMNNSDSTLKSCCITYADDPSSKNVCTYMDILLDDFVTIIKSLDLNVVSKVVDVIVDCKAWRWMLWCENSHIKTFYPQLQSSEWNPGYSMPTLYKIQRMCLERCNLYNYGAQVKLPDGITINVVKYTQLCQYLNTTTLCVPHKMRVLHLGAAGASGVAPGSTVLRRWLPDDAILVDNDLRDYVSDADFSVTGDCTSLYIEDKFDLLVSDLYDGSTKSIDGENTSKDGFFTYINGFIKEKLSLGGSVAIKITEFSWNKDLYELIQRFEYWTVFCTSVNTSSSEGFLIGINYLGPYCDKAIVDGNIMHANYIFWRNSTIMALSHNSVLDTPKFKCRCNNALIVNLKEKELNEMVIGLLRKGKLLIRNNGKLLNFGNHFVNTP
Reading sequence file /data//pss_subsets/A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result/original_alignment/codeml/fasta/A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result.1
Found 30 sequences of length 20094
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 6.9%
Found 3167 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 6.2% 12.2% 18.1% 23.7% 29.1% 34.3% 39.3% 44.1% 48.8% 53.2% 57.4% 61.4% 65.3% 68.9% 72.3% 75.5% 78.6% 81.4% 84.0% 86.4% 88.7% 90.7% 92.5% 94.1% 95.6% 96.8% 97.8% 98.7% 99.3% 99.7%100.0%100.0%
Using a window size of 80 with k as 13
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 409 polymorphic sites
**p-Value(s)**
----------
NSS: 0.00e+00 (1000 permutations)
Max Chi^2: 0.00e+00 (1000 permutations)
PHI (Permutation): 1.00e+00 (1000 permutations)
PHI (Normal): 1.00e+00
#NEXUS
[ID: 7973330377]
begin taxa;
dimensions ntax=30;
taxlabels
A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1
AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1
DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1
FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1
ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1
JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1
1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1
K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1
OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1
TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1
27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1
TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1
TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1
TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1
TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1
TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1
TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1
26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1
TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1
TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1
TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1
WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1
attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1
28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1
virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1
65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1
79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1
67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1
80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1
;
end;
begin trees;
translate
1 A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1,
2 AYU_NA_AEM55567_1_2009_China_Swine_Alphacoronavirus_1,
3 DF_2_NA_VIPR_P_87242672_12403_15159_1_NA_NA_Unknown_Alphacoronavirus_1,
4 FCoV_C1Je_NA_VIPR_ALG1_112253724_12332_15117_1_NA_NA_Unknown_Alphacoronavirus_1,
5 ISU_1_NA_ABG89318_1_NA_USA_Swine_Alphacoronavirus_1,
6 JS2012_ORF1b_AMB66487_1_2012_China_Swine_Alphacoronavirus_1,
7 1_71_NA_AFG19735_1_NA_NA_Dog_Alphacoronavirus_1,
8 K378_1ab_VIPR_ALG1_422313320_12264_15049_1_1978_USA_Dog_Alphacoronavirus_1,
9 OH7269_ORF1b_AKV62754_1_2014_07_24_USA_Swine_Alphacoronavirus_1,
10 TGEV_Mex_145_2008_ORF1b_ASV64357_1_2008_04_17_Mexico_Unknown_Alphacoronavirus_1,
11 27C_ORF_1a_1b_AJO26972_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1,
12 TGEV_USA_Illinois149_2013_ORF1b_ASV64392_1_2013_02_28_USA_Unknown_Alphacoronavirus_1,
13 TGEV_USA_Iowa143_2008_ORF1b_ASV64339_1_2008_03_06_USA_Unknown_Alphacoronavirus_1,
14 TGEV_USA_Minnesota148_2013_ORF1b_ASV64383_1_2013_01_04_USA_Unknown_Alphacoronavirus_1,
15 TGEV_USA_Minnesota150_2013_ORF1b_ASV64401_1_2013_03_01_USA_Unknown_Alphacoronavirus_1,
16 TGEV_USA_Minnesota152_2014_ORF1b_ASV64419_1_2014_01_31_USA_Unknown_Alphacoronavirus_1,
17 TGEV_USA_Minnesota153_2014_ORF1b_ASV64428_1_2014_02_04_USA_Unknown_Alphacoronavirus_1,
18 26M_ORF_1a_1b_AJO27022_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1,
19 TGEV_USA_NorthCarolina142_2007_ORF1b_ASV64330_1_2007_02_16_USA_Unknown_Alphacoronavirus_1,
20 TGEV_USA_Z_1986_ORF1b_ASV64275_1_2006_12_08_USA_Unknown_Alphacoronavirus_1,
21 TN_449_NA_AFG19738_1_NA_NA_Dog_Alphacoronavirus_1,
22 WH_1_NA_ADY39747_1_NA_China_Swine_Alphacoronavirus_1,
23 attenuated_Purdue_P115_NA_ABG89324_1_NA_NA_Swine_Alphacoronavirus_1,
24 28O_ORF_1a_1b_AJO26982_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1,
25 partially_attenuated_Miller_M60_NA_VIPR_P_110746810_12313_15069_1_1987_USA_Swine_Alphacoronavirus_1,
26 virulent_Miller_M6_NA_ABG89295_1_NA_USA_Swine_Alphacoronavirus_1,
27 65F_ORF_1a_1b_AJO26992_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1,
28 79_1146_ORF_1a_1b_VIPR_P_62836706_12409_15165_1_NA_USA_Unknown_Alphacoronavirus_1,
29 67F_ORF_1a_1b_AJO27002_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1,
30 80F_ORF_1a_1b_AJO27012_1_2013_01_01_United_Kingdom_Cat_Alphacoronavirus_1
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:1.956393e-02,(((3:2.959932e-03,28:2.474534e-03)0.706:5.079680e-03,(4:1.294864e-01,((11:4.441262e-05,18:4.698634e-05)0.991:6.958019e-04,(((24:4.879928e-04,27:2.409093e-04)0.998:4.355539e-04,29:3.003034e-04)0.995:2.380941e-04,30:1.612363e-04)0.635:2.455424e-04)1.000:1.609472e-01)1.000:4.167459e-01)1.000:1.042427e-01,(7:4.508640e-04,8:8.130417e-03)1.000:6.748436e-02)1.000:1.679866e-02,((((2:3.847506e-04,22:1.565198e-04,23:8.391508e-04)0.989:3.696300e-04,10:1.480480e-03,20:8.249662e-04)1.000:2.697926e-03,((5:4.048573e-03,(9:3.247748e-02,(((((12:3.729512e-04,15:5.954771e-04)1.000:5.967196e-04,14:1.625575e-04)1.000:4.902187e-03,13:8.108318e-04)1.000:9.667905e-04,19:6.832374e-04)0.997:1.655117e-03,(16:1.541918e-04,17:3.720542e-04)1.000:1.083453e-02)1.000:1.737708e-02)0.991:3.077102e-03)1.000:1.764404e-02,(6:5.351195e-04,25:4.913242e-04,26:3.815224e-04)1.000:6.763435e-03)1.000:7.928091e-03)1.000:4.613423e-02,21:3.294826e-02)0.568:5.818270e-03);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:1.956393e-02,(((3:2.959932e-03,28:2.474534e-03):5.079680e-03,(4:1.294864e-01,((11:4.441262e-05,18:4.698634e-05):6.958019e-04,(((24:4.879928e-04,27:2.409093e-04):4.355539e-04,29:3.003034e-04):2.380941e-04,30:1.612363e-04):2.455424e-04):1.609472e-01):4.167459e-01):1.042427e-01,(7:4.508640e-04,8:8.130417e-03):6.748436e-02):1.679866e-02,((((2:3.847506e-04,22:1.565198e-04,23:8.391508e-04):3.696300e-04,10:1.480480e-03,20:8.249662e-04):2.697926e-03,((5:4.048573e-03,(9:3.247748e-02,(((((12:3.729512e-04,15:5.954771e-04):5.967196e-04,14:1.625575e-04):4.902187e-03,13:8.108318e-04):9.667905e-04,19:6.832374e-04):1.655117e-03,(16:1.541918e-04,17:3.720542e-04):1.083453e-02):1.737708e-02):3.077102e-03):1.764404e-02,(6:5.351195e-04,25:4.913242e-04,26:3.815224e-04):6.763435e-03):7.928091e-03):4.613423e-02,21:3.294826e-02):5.818270e-03);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -48798.41 -48828.19
2 -48799.89 -48828.30
--------------------------------------
TOTAL -48798.90 -48828.25
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.150113 0.001782 1.077035 1.242374 1.147970 658.09 798.59 1.000
r(A<->C){all} 0.046100 0.000026 0.036612 0.056353 0.045987 771.60 820.79 1.000
r(A<->G){all} 0.277076 0.000139 0.253491 0.298801 0.277080 515.87 594.21 1.003
r(A<->T){all} 0.058201 0.000015 0.050573 0.066300 0.058148 578.33 830.88 1.000
r(C<->G){all} 0.005262 0.000006 0.000897 0.010204 0.004995 568.29 664.79 1.000
r(C<->T){all} 0.567066 0.000179 0.540944 0.593338 0.566999 462.08 557.04 1.002
r(G<->T){all} 0.046295 0.000013 0.039264 0.053050 0.046373 811.87 821.87 1.000
pi(A){all} 0.291636 0.000008 0.286184 0.297269 0.291608 516.51 641.60 1.001
pi(C){all} 0.164542 0.000005 0.160415 0.169634 0.164602 714.75 724.48 1.000
pi(G){all} 0.208691 0.000007 0.203547 0.214083 0.208700 382.97 438.27 1.000
pi(T){all} 0.335132 0.000008 0.329039 0.340444 0.335276 590.22 604.63 1.000
alpha{1,2} 0.096757 0.000016 0.089196 0.104557 0.096768 1166.05 1187.49 1.000
alpha{3} 13.948576 7.232486 9.220163 19.297170 13.694720 1212.90 1296.09 1.000
pinvar{all} 0.382004 0.000131 0.359993 0.404040 0.382241 1220.78 1231.55 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/A76_1ab_VIPR_ALG1_418470985_12268_15053_1_1976_USA_Dog_Alphacoronavirus_1.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 12 ls = 919
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 37 35 36 35 37 36 | Ser TCT 18 19 14 18 17 19 | Tyr TAT 35 38 38 33 34 35 | Cys TGT 23 26 27 25 23 25
TTC 18 19 18 20 18 19 | TCC 6 4 10 5 6 5 | TAC 24 20 20 27 26 25 | TGC 9 7 6 7 9 7
Leu TTA 18 16 19 13 17 20 | TCA 13 11 7 13 13 13 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 15 22 17 16 15 13 | TCG 0 2 5 1 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 8 8 8 8 8 8
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 30 24 23 26 29 30 | Pro CCT 9 10 8 9 9 7 | His CAT 17 12 13 16 18 16 | Arg CGT 11 11 13 12 12 12
CTC 5 3 4 9 6 5 | CCC 4 5 4 4 4 4 | CAC 7 10 10 6 4 6 | CGC 5 5 4 4 4 4
CTA 4 6 7 7 5 4 | CCA 13 11 13 12 11 15 | Gln CAA 12 13 12 13 14 13 | CGA 2 6 4 2 2 2
CTG 0 2 4 1 0 1 | CCG 1 0 2 2 3 1 | CAG 11 10 11 11 10 11 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 21 17 16 22 22 20 | Thr ACT 18 24 22 20 18 18 | Asn AAT 33 31 35 32 34 32 | Ser AGT 12 13 14 13 10 12
ATC 4 10 9 4 4 5 | ACC 4 3 7 3 4 4 | AAC 16 18 13 18 16 17 | AGC 5 4 2 4 6 5
ATA 12 12 10 12 12 12 | ACA 35 29 25 34 36 35 | Lys AAA 37 29 29 36 34 36 | Arg AGA 13 9 9 13 13 13
Met ATG 27 26 26 27 27 27 | ACG 3 4 6 2 2 3 | AAG 21 30 30 22 24 22 | AGG 3 4 5 3 3 3
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 40 36 40 39 38 41 | Ala GCT 36 31 32 37 39 36 | Asp GAT 41 48 47 42 43 44 | Gly GGT 37 35 33 37 37 38
GTC 8 9 10 9 9 9 | GCC 6 8 7 6 4 7 | GAC 24 24 26 23 22 21 | GGC 4 5 6 4 5 3
GTA 14 12 12 13 14 12 | GCA 15 18 18 16 15 15 | Glu GAA 28 20 21 29 28 26 | GGA 13 14 14 13 10 14
GTG 12 16 14 12 12 11 | GCG 4 6 6 2 3 2 | GAG 15 17 15 14 15 17 | GGG 2 1 2 2 4 1
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 36 37 35 37 35 37 | Ser TCT 17 19 19 18 19 20 | Tyr TAT 31 34 38 30 38 35 | Cys TGT 23 25 26 24 26 26
TTC 19 18 19 18 19 18 | TCC 6 5 4 5 4 5 | TAC 27 26 20 30 20 25 | TGC 9 7 7 8 7 7
Leu TTA 15 18 16 13 16 19 | TCA 14 13 11 13 11 12 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 16 14 22 16 22 13 | TCG 1 0 2 1 2 1 | TAG 0 0 0 0 0 0 | Trp TGG 8 8 8 8 8 8
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 28 31 24 27 24 29 | Pro CCT 11 9 10 9 10 8 | His CAT 15 17 12 16 12 16 | Arg CGT 13 12 11 13 11 12
CTC 5 4 3 8 3 6 | CCC 3 4 5 4 5 4 | CAC 8 5 10 6 10 6 | CGC 3 4 5 3 5 3
CTA 7 4 6 7 6 4 | CCA 10 13 11 13 11 13 | Gln CAA 15 14 13 13 13 13 | CGA 4 2 6 2 6 2
CTG 2 1 2 1 2 1 | CCG 2 1 1 1 0 2 | CAG 9 10 10 11 10 11 | CGG 1 1 1 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 22 20 17 19 17 21 | Thr ACT 17 18 24 18 24 17 | Asn AAT 31 32 31 32 31 32 | Ser AGT 12 12 13 12 13 12
ATC 4 5 10 7 10 4 | ACC 5 4 3 3 3 5 | AAC 18 17 18 18 18 17 | AGC 7 5 4 5 4 5
ATA 12 11 12 11 12 13 | ACA 31 35 29 36 29 34 | Lys AAA 34 38 29 35 29 36 | Arg AGA 12 13 9 14 9 14
Met ATG 26 28 26 27 26 28 | ACG 5 3 4 2 4 2 | AAG 25 20 30 23 30 21 | AGG 2 2 4 2 4 3
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 36 41 37 40 38 41 | Ala GCT 38 36 31 37 31 36 | Asp GAT 48 45 48 42 48 43 | Gly GGT 36 37 35 36 35 38
GTC 8 8 8 9 7 9 | GCC 5 7 8 7 8 7 | GAC 19 21 24 23 24 22 | GGC 6 4 5 4 5 2
GTA 22 15 12 15 12 14 | GCA 16 15 18 16 18 16 | Glu GAA 30 27 20 29 20 27 | GGA 11 13 14 14 14 15
GTG 8 11 16 10 16 10 | GCG 1 3 5 1 6 1 | GAG 11 15 17 14 17 16 | GGG 3 2 1 2 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C52
position 1: T:0.24374 C:0.14363 A:0.28727 G:0.32535
position 2: T:0.28836 C:0.20131 A:0.34929 G:0.16104
position 3: T:0.45484 C:0.16213 A:0.24918 G:0.13384
Average T:0.32898 C:0.16902 A:0.29525 G:0.20675
#2: C8
position 1: T:0.24701 C:0.14037 A:0.28618 G:0.32644
position 2: T:0.28836 C:0.20131 A:0.34820 G:0.16213
position 3: T:0.44614 C:0.16757 A:0.22416 G:0.16213
Average T:0.32717 C:0.16975 A:0.28618 G:0.21690
#3: C14
position 1: T:0.24483 C:0.14472 A:0.28074 G:0.32971
position 2: T:0.28836 C:0.20239 A:0.34820 G:0.16104
position 3: T:0.44723 C:0.16975 A:0.21763 G:0.16540
Average T:0.32680 C:0.17229 A:0.28219 G:0.21872
#4: C10
position 1: T:0.24048 C:0.14690 A:0.28836 G:0.32427
position 2: T:0.28836 C:0.20022 A:0.35038 G:0.16104
position 3: T:0.45267 C:0.16649 A:0.24592 G:0.13493
Average T:0.32717 C:0.17120 A:0.29489 G:0.20675
#5: C11
position 1: T:0.24374 C:0.14363 A:0.28836 G:0.32427
position 2: T:0.28836 C:0.20131 A:0.35038 G:0.15996
position 3: T:0.45702 C:0.15996 A:0.24374 G:0.13928
Average T:0.32971 C:0.16830 A:0.29416 G:0.20783
#6: C35
position 1: T:0.24592 C:0.14363 A:0.28727 G:0.32318
position 2: T:0.28836 C:0.20131 A:0.34929 G:0.16104
position 3: T:0.45811 C:0.15887 A:0.25027 G:0.13275
Average T:0.33079 C:0.16794 A:0.29561 G:0.20566
#7: C13
position 1: T:0.24157 C:0.14799 A:0.28618 G:0.32427
position 2: T:0.28945 C:0.19804 A:0.34929 G:0.16322
position 3: T:0.45049 C:0.16540 A:0.25354 G:0.13058
Average T:0.32717 C:0.17048 A:0.29634 G:0.20602
#8: C18
position 1: T:0.24374 C:0.14363 A:0.28618 G:0.32644
position 2: T:0.28945 C:0.20131 A:0.34929 G:0.15996
position 3: T:0.46246 C:0.15669 A:0.25136 G:0.12949
Average T:0.33188 C:0.16721 A:0.29561 G:0.20530
#9: C9
position 1: T:0.24701 C:0.14146 A:0.28618 G:0.32535
position 2: T:0.28836 C:0.20131 A:0.34820 G:0.16213
position 3: T:0.44723 C:0.16649 A:0.22416 G:0.16213
Average T:0.32753 C:0.16975 A:0.28618 G:0.21654
#10: C47
position 1: T:0.24048 C:0.14690 A:0.28727 G:0.32535
position 2: T:0.28836 C:0.20022 A:0.35038 G:0.16104
position 3: T:0.44614 C:0.17193 A:0.25136 G:0.13058
Average T:0.32499 C:0.17301 A:0.29634 G:0.20566
#11: C5
position 1: T:0.24701 C:0.14037 A:0.28618 G:0.32644
position 2: T:0.28836 C:0.20131 A:0.34820 G:0.16213
position 3: T:0.44831 C:0.16540 A:0.22416 G:0.16213
Average T:0.32789 C:0.16902 A:0.28618 G:0.21690
#12: C38
position 1: T:0.24592 C:0.14255 A:0.28727 G:0.32427
position 2: T:0.29053 C:0.19913 A:0.34820 G:0.16213
position 3: T:0.46028 C:0.15778 A:0.25245 G:0.12949
Average T:0.33225 C:0.16649 A:0.29597 G:0.20530
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 433 | Ser S TCT 217 | Tyr Y TAT 419 | Cys C TGT 299
TTC 223 | TCC 65 | TAC 290 | TGC 90
Leu L TTA 200 | TCA 144 | *** * TAA 0 | *** * TGA 0
TTG 201 | TCG 17 | TAG 0 | Trp W TGG 96
------------------------------------------------------------------------------
Leu L CTT 325 | Pro P CCT 109 | His H CAT 180 | Arg R CGT 143
CTC 61 | CCC 50 | CAC 88 | CGC 49
CTA 67 | CCA 146 | Gln Q CAA 158 | CGA 40
CTG 17 | CCG 16 | CAG 125 | CGG 12
------------------------------------------------------------------------------
Ile I ATT 234 | Thr T ACT 238 | Asn N AAT 386 | Ser S AGT 148
ATC 76 | ACC 48 | AAC 204 | AGC 56
ATA 141 | ACA 388 | Lys K AAA 402 | Arg R AGA 141
Met M ATG 321 | ACG 40 | AAG 298 | AGG 38
------------------------------------------------------------------------------
Val V GTT 467 | Ala A GCT 420 | Asp D GAT 539 | Gly G GGT 434
GTC 103 | GCC 80 | GAC 273 | GGC 53
GTA 167 | GCA 196 | Glu E GAA 305 | GGA 159
GTG 148 | GCG 40 | GAG 183 | GGG 22
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.24429 C:0.14382 A:0.28645 G:0.32544
position 2: T:0.28872 C:0.20076 A:0.34911 G:0.16141
position 3: T:0.45258 C:0.16404 A:0.24066 G:0.14273
Average T:0.32853 C:0.16954 A:0.29207 G:0.20986
Model 1: NearlyNeutral (2 categories)
Model 1: NearlyNeutral
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
