--- EXPERIMENT NOTES
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken.
#
### General parameters ###
#
# The maximum number of sequences to use for the master file
sequence_limit=90
# The random seed
random_seed=3976763
#
### Alignment ###
#
# The alignment method: clustalw, muscle, kalign, t_coffee, or amap
align_method=muscle
# Minimum support value for amino acid positions in the alignment
tcoffee_min_score=3
#
### MrBayes ###
#
# Number of iterations in MrBayes
mrbayes_generations=1000000
# MrBayes burnin
mrbayes_burnin=2500
#
### FUBAR ###
#
# The maximum number of sequences to be used by FUBAR.
fubar_sequence_limit=90
# The number of FUBAR runs
fubar_runs=1
#
### codeML ###
#
# The maximum number of sequences to be used by CodeML
codeml_sequence_limit=30
# The number of CodeML runs
codeml_runs=1
# The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'.
codeml_models=1 2 7 8
#
### OmegaMap ###
#
# The maximum number of sequences to use in OmegaMap
omegamap_sequence_limit=90
# The number of OmegaMap runs
omegamap_runs=1
# The number of OmegaMap iterations
omegamap_iterations=2500
--- EXPERIMENT PROPERTIES
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -4661.36 -4683.17
2 -4660.99 -4681.56
--------------------------------------
TOTAL -4661.15 -4682.66
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.264993 0.014786 1.047439 1.506054 1.256013 1146.82 1172.07 1.000
r(A<->C){all} 0.089316 0.000342 0.054197 0.126011 0.088443 1003.16 1022.35 1.000
r(A<->G){all} 0.281720 0.000979 0.221727 0.344311 0.280698 785.83 855.35 1.000
r(A<->T){all} 0.047101 0.000106 0.027708 0.066948 0.046669 1017.93 1051.04 1.000
r(C<->G){all} 0.012941 0.000088 0.000001 0.030723 0.011114 947.80 987.74 1.004
r(C<->T){all} 0.518649 0.001145 0.454678 0.585799 0.518087 691.66 749.04 1.001
r(G<->T){all} 0.050273 0.000105 0.030659 0.069703 0.049599 803.52 935.32 1.000
pi(A){all} 0.262047 0.000109 0.242898 0.283907 0.262121 1138.89 1218.65 1.000
pi(C){all} 0.165678 0.000062 0.148604 0.179710 0.165512 850.77 1066.45 1.001
pi(G){all} 0.194465 0.000088 0.175691 0.212001 0.194331 1038.74 1088.86 1.001
pi(T){all} 0.377809 0.000120 0.355791 0.398486 0.377702 1173.44 1226.53 1.000
alpha{1,2} 0.132752 0.000177 0.106451 0.158016 0.131463 1220.00 1320.32 1.000
alpha{3} 5.401932 2.818308 2.386186 8.588265 5.159255 1296.93 1305.92 1.000
pinvar{all} 0.279501 0.001545 0.198946 0.355116 0.280502 1280.12 1303.44 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
--- CODEML SUMMARY
Model 1: NearlyNeutral -4262.719327
Model 2: PositiveSelection -4262.719327
Model 7: beta -4263.735724
Model 8: beta&w>1 -4260.007726
Model 2 vs 1 0
Model 8 vs 7 7.455996
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
7 W 0.619 1.121 +- 0.520
9 L 0.678 1.152 +- 0.555
11 L 0.899 1.425 +- 0.292
65 V 0.649 1.154 +- 0.510
248 T 0.810 1.338 +- 0.387
257 A 0.506 0.996 +- 0.543
367 I 0.604 1.099 +- 0.535
-- Starting log on Wed Nov 09 22:46:21 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.06 sec, SCORE=1000, Nseq=13, Len=496
C1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C2 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C3 SGFFDVIKQLKQIVMLILAFIFIYGLCSVYSVATQSYIESAEGYDYMVIK
C4 SGFFDVLKQLKQLFWCLVFVITICGLCSVYSFATQSYIDSAEGYDYMVIK
C5 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C6 SGFFDVLKQLKQIFWCVVLFITLYGLCSVYSVATQSYIDSADGYEYMVIK
C7 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C8 SGFFDVLKQLKQIFWCLVLFITIYGLCSVYSVATQSYIDSAEGYDYMVIK
C9 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIK
C10 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIK
C11 -GFFDVITQLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIK
C12 -GFFDVITQLKQIVILVFVFIFICGLCSVYSAATQSYIESAEGYDYMVIK
C13 --------QLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIK
****:. :. .* : ******* ******:**:**:*****
C1 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C2 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C3 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
C4 NGVVQSFDDSINCVHNTYKGFTVWFKAKYGFVPTFDKSCPIVLGTVFDLG
C5 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C6 NGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLG
C7 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C8 NGVVQPFDDSINCVHNTYKGFAVWFKAKYGFVPTFAKSCPIVLGTAFDLG
C9 NGIVQPFDDTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLE
C10 NGIVQPFDDTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLE
C11 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
C12 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
C13 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
**:**.***:*.********* *****:**:*** *:****:**.***
C1 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C2 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C3 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGSAVSKDSYFDTC
C4 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C5 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C6 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKSAYFDTC
C7 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C8 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGASVSKNSYFDTC
C9 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C10 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C11 NMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C12 NMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C13 NMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
************::*****************:****** :***.:*****
C1 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C2 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C3 VFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C4 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C5 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLLDYYYEHASGNMVKI
C6 VFNSACTTLTGLGGTIVYCAKQGLVEGSKLYSELMPDYFYEHASGNMVKI
C7 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C8 VFNSACTTLAGLGGTVVYCAKQGLVEGAKLYSELMPDYYYEHASGNMVKI
C9 VFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C10 VFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C11 VFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C12 VFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C13 VFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
***:*****:*:***:***********:****:*: **:**********:
C1 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C2 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C3 PAIIRGLGLRFVKTQVTTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
C4 PAIIRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C5 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C6 PAIIRGFGLRFVKTQATTYCRVGECIESQAGFCFGGDNWFVYDKEFGDGY
C7 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C8 PAIVRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C9 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDKEFGNGY
C10 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDKEFGNGY
C11 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
C12 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
C13 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
***:*.:********.********* :*:**************:***:**
C1 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C2 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C3 ICGNSILGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C4 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIIIACLAIAVCYGVLKF
C5 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C6 ICGSSTLGFLKNVFALFNSNMSVVATPGAMLVNIIIACFAIAVCYGVLKF
C7 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C8 ICGSSVLGFFKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKF
C9 ICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C10 ICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C11 ICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C12 ICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C13 ICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
***.* ***:**** ***********.****.**:***:***:*******
C1 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C2 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C3 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C4 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C5 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C6 KKIFGDCTLLVVMIIVTLIVNNVSYFVTQNTFFMIVYAVVYYFTTRKLAY
C7 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C8 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C9 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C10 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C11 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFITRKLAY
C12 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C13 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
********:*:*******:****************:**::*** ******
C1 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C2 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C3 PGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C4 PGILDAGFIIAYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDK
C5 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C6 PGILDAGFIIAYVNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C7 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C8 PGILDAGFIIAYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDK
C9 PGVLDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C10 PGVLDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C11 PGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C12 PGVLDAGFIIAYINMAPWYVITAYVLVFLYDSLPSLFKLKVSTNLFEGDK
C13 PGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
**:*********:*******:. *::***************:********
C1 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C2 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C3 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C4 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C5 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C6 FVGSFESAAMGTFVIDMRSYETIVNSTSLDRIKSYANSFNKYKYYTGSMG
C7 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C8 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C9 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C10 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C11 FVGNFESAAMGTFVIDMRSYETIVNSTSIARIKSYANSFNKYKYYTGSMG
C12 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C13 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
***.******************:****.: ********************
C1 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C2 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C3 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C4 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C5 EADYRMACYAHLGKALMDYSVSRNDILYTPPTVSVNSTLQ------
C6 EADYRMACYAHLGKALMDYSVSRNDILYTPPTISVNSTLQ------
C7 EADYRMACYAHLGKALMDYSVSRNDKLYTPPTVSVNSTLQ------
C8 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C9 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C10 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C11 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C12 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C13 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQSGLRKM
*********************.*.* ******:*******
-- Starting log on Wed Nov 09 22:47:25 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.14 sec, SCORE=999, Nseq=13, Len=496
C1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C2 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C3 SGFFDVIKQLKQIVMLILAFIFIYGLCSVYSVATQSYIESAEGYDYMVIK
C4 SGFFDVLKQLKQLFWCLVFVITICGLCSVYSFATQSYIDSAEGYDYMVIK
C5 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C6 SGFFDVLKQLKQIFWCVVLFITLYGLCSVYSVATQSYIDSADGYEYMVIK
C7 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C8 SGFFDVLKQLKQIFWCLVLFITIYGLCSVYSVATQSYIDSAEGYDYMVIK
C9 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIK
C10 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIK
C11 -GFFDVITQLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIK
C12 -GFFDVITQLKQIVILVFVFIFICGLCSVYSAATQSYIESAEGYDYMVIK
C13 --------QLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIK
****:. :. .* : ******* ******:**:**:*****
C1 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C2 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C3 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
C4 NGVVQSFDDSINCVHNTYKGFTVWFKAKYGFVPTFDKSCPIVLGTVFDLG
C5 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C6 NGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLG
C7 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C8 NGVVQPFDDSINCVHNTYKGFAVWFKAKYGFVPTFAKSCPIVLGTAFDLG
C9 NGIVQPFDDTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLE
C10 NGIVQPFDDTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLE
C11 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
C12 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
C13 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
**:**.***:*.********* *****:**:*** *:****:**.***
C1 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C2 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C3 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGSAVSKDSYFDTC
C4 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C5 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C6 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKSAYFDTC
C7 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C8 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGASVSKNSYFDTC
C9 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C10 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C11 NMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C12 NMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C13 NMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
************::*****************:****** :***.:*****
C1 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C2 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C3 VFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C4 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C5 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLLDYYYEHASGNMVKI
C6 VFNSACTTLTGLGGTIVYCAKQGLVEGSKLYSELMPDYFYEHASGNMVKI
C7 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C8 VFNSACTTLAGLGGTVVYCAKQGLVEGAKLYSELMPDYYYEHASGNMVKI
C9 VFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C10 VFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C11 VFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C12 VFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C13 VFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
***:*****:*:***:***********:****:*: **:**********:
C1 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C2 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C3 PAIIRGLGLRFVKTQVTTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
C4 PAIIRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C5 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C6 PAIIRGFGLRFVKTQATTYCRVGECIESQAGFCFGGDNWFVYDKEFGDGY
C7 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C8 PAIVRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C9 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDKEFGNGY
C10 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDKEFGNGY
C11 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
C12 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
C13 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
***:*.:********.********* :*:**************:***:**
C1 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C2 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C3 ICGNSILGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C4 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIIIACLAIAVCYGVLKF
C5 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C6 ICGSSTLGFLKNVFALFNSNMSVVATPGAMLVNIIIACFAIAVCYGVLKF
C7 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C8 ICGSSVLGFFKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKF
C9 ICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C10 ICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C11 ICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C12 ICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C13 ICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
***.* ***:**** ***********.****.**:***:***:*******
C1 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C2 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C3 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C4 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C5 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C6 KKIFGDCTLLVVMIIVTLIVNNVSYFVTQNTFFMIVYAVVYYFTTRKLAY
C7 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C8 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C9 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C10 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C11 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFITRKLAY
C12 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C13 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
********:*:*******:****************:**::*** ******
C1 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C2 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C3 PGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C4 PGILDAGFIIAYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDK
C5 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C6 PGILDAGFIIAYVNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C7 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C8 PGILDAGFIIAYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDK
C9 PGVLDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C10 PGVLDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C11 PGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C12 PGVLDAGFIIAYINMAPWYVITAYVLVFLYDSLPSLFKLKVSTNLFEGDK
C13 PGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
**:*********:*******:. *::***************:********
C1 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C2 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C3 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C4 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C5 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C6 FVGSFESAAMGTFVIDMRSYETIVNSTSLDRIKSYANSFNKYKYYTGSMG
C7 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C8 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C9 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C10 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C11 FVGNFESAAMGTFVIDMRSYETIVNSTSIARIKSYANSFNKYKYYTGSMG
C12 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C13 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
***.******************:****.: ********************
C1 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C2 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C3 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C4 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C5 EADYRMACYAHLGKALMDYSVSRNDILYTPPTVSVNSTLQ------
C6 EADYRMACYAHLGKALMDYSVSRNDILYTPPTISVNSTLQ------
C7 EADYRMACYAHLGKALMDYSVSRNDKLYTPPTVSVNSTLQ------
C8 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C9 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C10 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C11 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C12 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C13 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQSGLRKM
*********************.*.* ******:*******
-- Starting log on Thu Nov 10 05:12:47 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result/gapped_alignment/codeml,A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result.1--
MrBayes v3.2.6 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/data/mrbayes_input.nex"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 13 taxa and 1488 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C10
Taxon 3 -> C11
Taxon 4 -> C12
Taxon 5 -> C13
Taxon 6 -> C2
Taxon 7 -> C3
Taxon 8 -> C4
Taxon 9 -> C5
Taxon 10 -> C6
Taxon 11 -> C7
Taxon 12 -> C8
Taxon 13 -> C9
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1668057169
Setting output file names to "/data/mrbayes_input.nex.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called 'first_pos'
Defining charset called 'second_pos'
Defining charset called 'third_pos'
Defining partition called 'by_codon'
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1739415956
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 8566743768
Seed = 1031079980
Swapseed = 1668057169
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
The distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Shape parameter is exponentially
distributed with parameter (1.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Active parameters:
Partition(s)
Parameters 1 2 3
---------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
---------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(1.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.91 % Dirichlet(Revmat{all})
0.91 % Slider(Revmat{all})
0.91 % Dirichlet(Pi{all})
0.91 % Slider(Pi{all})
1.82 % Multiplier(Alpha{1,2})
1.82 % Multiplier(Alpha{3})
1.82 % Slider(Pinvar{all})
9.09 % ExtSPR(Tau{all},V{all})
9.09 % ExtTBR(Tau{all},V{all})
9.09 % NNI(Tau{all},V{all})
9.09 % ParsSPR(Tau{all},V{all})
36.36 % Multiplier(V{all})
12.73 % Nodeslider(V{all})
5.45 % TLMultiplier(V{all})
Division 1 has 66 unique site patterns
Division 2 has 38 unique site patterns
Division 3 has 183 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -9402.752979 -- 44.441226
Chain 2 -- -10074.746432 -- 44.441226
Chain 3 -- -9444.463318 -- 44.441226
Chain 4 -- -10396.232864 -- 44.441226
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -9242.674120 -- 44.441226
Chain 2 -- -9010.351944 -- 44.441226
Chain 3 -- -9301.583087 -- 44.441226
Chain 4 -- -10478.648042 -- 44.441226
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-9402.753] (-10074.746) (-9444.463) (-10396.233) * [-9242.674] (-9010.352) (-9301.583) (-10478.648)
1000 -- (-4975.428) (-4838.046) [-4816.273] (-4842.050) * (-4863.186) (-4880.868) [-4806.247] (-4916.714) -- 0:16:39
2000 -- (-4777.735) (-4742.813) [-4721.195] (-4763.894) * (-4721.316) (-4785.659) [-4713.616] (-4782.710) -- 0:16:38
3000 -- (-4700.594) [-4698.371] (-4698.048) (-4754.623) * (-4691.783) (-4715.564) [-4687.187] (-4755.215) -- 0:16:37
4000 -- (-4685.035) (-4692.029) [-4675.140] (-4692.926) * (-4681.191) (-4690.481) [-4686.279] (-4719.811) -- 0:16:36
5000 -- (-4678.207) (-4664.470) (-4663.923) [-4672.970] * [-4668.417] (-4665.427) (-4675.268) (-4681.448) -- 0:16:35
Average standard deviation of split frequencies: 0.082309
6000 -- (-4674.774) [-4673.238] (-4669.797) (-4671.475) * (-4674.681) (-4678.848) (-4673.271) [-4674.641] -- 0:16:34
7000 -- (-4673.359) (-4677.811) [-4667.926] (-4674.145) * (-4678.431) (-4676.651) [-4674.692] (-4678.386) -- 0:16:33
8000 -- (-4666.571) [-4669.821] (-4672.838) (-4665.356) * [-4671.796] (-4669.666) (-4672.886) (-4671.423) -- 0:16:32
9000 -- [-4663.360] (-4664.307) (-4680.951) (-4671.177) * (-4666.574) (-4677.871) (-4663.375) [-4660.319] -- 0:16:31
10000 -- (-4674.162) [-4666.241] (-4675.052) (-4678.220) * (-4674.385) (-4671.454) (-4669.197) [-4663.206] -- 0:16:30
Average standard deviation of split frequencies: 0.048846
11000 -- [-4664.581] (-4679.914) (-4677.879) (-4669.804) * (-4683.051) (-4673.867) [-4669.504] (-4676.120) -- 0:17:58
12000 -- (-4671.951) (-4675.085) [-4663.072] (-4667.258) * (-4678.373) [-4666.682] (-4679.209) (-4665.611) -- 0:17:50
13000 -- (-4671.534) [-4671.749] (-4672.168) (-4672.159) * (-4671.490) (-4674.257) [-4672.822] (-4671.735) -- 0:17:42
14000 -- (-4670.461) (-4664.069) (-4677.000) [-4668.945] * (-4681.611) (-4668.926) (-4676.554) [-4678.031] -- 0:17:36
15000 -- (-4668.396) (-4673.629) [-4673.401] (-4681.895) * (-4678.682) (-4665.657) [-4664.661] (-4679.006) -- 0:17:30
Average standard deviation of split frequencies: 0.047140
16000 -- (-4688.579) [-4664.249] (-4688.709) (-4666.383) * (-4680.655) (-4669.354) [-4672.359] (-4672.373) -- 0:17:25
17000 -- (-4667.625) (-4668.712) [-4661.028] (-4666.703) * (-4673.563) (-4664.788) [-4675.383] (-4674.104) -- 0:17:20
18000 -- (-4671.632) (-4673.396) (-4677.305) [-4664.247] * (-4675.418) [-4670.383] (-4671.929) (-4670.213) -- 0:17:16
19000 -- (-4672.139) (-4673.448) (-4670.293) [-4665.092] * (-4664.613) (-4671.638) [-4675.187] (-4669.966) -- 0:17:12
20000 -- (-4681.391) (-4671.923) [-4671.246] (-4676.055) * (-4668.914) (-4676.651) [-4667.843] (-4673.011) -- 0:17:09
Average standard deviation of split frequencies: 0.047901
21000 -- [-4662.844] (-4669.332) (-4665.662) (-4671.122) * [-4669.431] (-4670.575) (-4677.706) (-4672.507) -- 0:17:05
22000 -- (-4667.358) (-4670.453) [-4670.125] (-4672.185) * [-4667.987] (-4672.118) (-4679.014) (-4677.018) -- 0:17:02
23000 -- [-4665.569] (-4669.504) (-4673.476) (-4681.610) * (-4665.874) [-4670.850] (-4675.053) (-4666.011) -- 0:16:59
24000 -- (-4675.764) (-4676.795) (-4672.609) [-4664.701] * (-4675.140) [-4673.156] (-4673.262) (-4668.121) -- 0:16:56
25000 -- (-4683.193) (-4666.525) (-4674.527) [-4672.190] * (-4666.453) (-4672.195) [-4672.326] (-4671.360) -- 0:16:53
Average standard deviation of split frequencies: 0.041701
26000 -- (-4666.855) (-4678.518) [-4662.470] (-4666.818) * (-4659.809) (-4663.205) [-4670.504] (-4677.850) -- 0:16:51
27000 -- [-4666.140] (-4664.930) (-4668.131) (-4670.607) * (-4669.468) (-4674.776) (-4669.943) [-4659.521] -- 0:16:49
28000 -- [-4666.594] (-4687.141) (-4668.789) (-4684.964) * (-4675.748) (-4672.499) [-4671.101] (-4669.788) -- 0:16:46
29000 -- [-4676.499] (-4669.189) (-4664.653) (-4671.161) * (-4668.916) (-4675.994) [-4670.469] (-4673.965) -- 0:17:17
30000 -- (-4673.939) (-4673.379) [-4669.813] (-4674.231) * (-4670.677) [-4661.506] (-4678.705) (-4670.606) -- 0:17:14
Average standard deviation of split frequencies: 0.040735
31000 -- [-4672.184] (-4659.940) (-4668.745) (-4673.186) * (-4668.437) [-4669.021] (-4675.288) (-4665.778) -- 0:17:11
32000 -- [-4666.594] (-4669.839) (-4682.185) (-4666.416) * (-4677.262) [-4676.383] (-4677.105) (-4661.630) -- 0:17:08
33000 -- (-4680.752) [-4660.792] (-4678.997) (-4678.701) * (-4675.106) (-4674.124) [-4672.662] (-4672.244) -- 0:17:05
34000 -- (-4675.074) [-4662.616] (-4681.323) (-4682.873) * (-4672.441) (-4676.931) (-4671.734) [-4668.470] -- 0:17:02
35000 -- (-4667.520) (-4680.712) (-4667.116) [-4668.282] * (-4679.181) (-4670.858) (-4663.659) [-4679.406] -- 0:17:00
Average standard deviation of split frequencies: 0.025534
36000 -- (-4667.849) (-4665.284) (-4666.381) [-4665.600] * [-4667.523] (-4678.400) (-4675.675) (-4687.685) -- 0:16:57
37000 -- (-4661.787) [-4661.676] (-4679.920) (-4673.741) * (-4671.635) (-4670.676) [-4665.408] (-4679.364) -- 0:16:55
38000 -- (-4678.163) (-4674.098) [-4675.718] (-4673.468) * (-4671.331) (-4675.328) (-4677.166) [-4670.671] -- 0:16:52
39000 -- (-4679.154) (-4674.090) [-4666.532] (-4675.322) * (-4672.139) [-4671.996] (-4682.860) (-4668.426) -- 0:16:50
40000 -- (-4660.894) (-4673.626) [-4664.791] (-4671.891) * (-4675.209) (-4675.061) (-4673.692) [-4666.881] -- 0:16:47
Average standard deviation of split frequencies: 0.029559
41000 -- (-4664.589) (-4673.284) (-4669.791) [-4665.328] * (-4673.770) [-4670.738] (-4678.968) (-4667.590) -- 0:16:45
42000 -- (-4668.735) (-4667.318) (-4663.741) [-4664.127] * (-4676.603) [-4662.245] (-4665.215) (-4678.248) -- 0:16:43
43000 -- (-4678.504) [-4670.745] (-4672.590) (-4678.406) * (-4681.164) [-4661.325] (-4667.199) (-4668.874) -- 0:16:41
44000 -- [-4682.622] (-4670.149) (-4680.106) (-4675.911) * (-4674.022) [-4667.063] (-4672.378) (-4673.228) -- 0:17:01
45000 -- [-4666.487] (-4673.806) (-4677.786) (-4668.108) * [-4663.073] (-4674.018) (-4676.756) (-4677.585) -- 0:16:58
Average standard deviation of split frequencies: 0.029719
46000 -- (-4680.599) (-4673.427) [-4681.984] (-4680.747) * (-4670.483) (-4677.073) [-4674.627] (-4667.529) -- 0:16:56
47000 -- (-4671.185) (-4678.681) (-4666.691) [-4661.381] * (-4674.853) (-4671.035) (-4677.188) [-4677.921] -- 0:16:53
48000 -- (-4676.541) (-4693.969) (-4675.388) [-4664.206] * (-4674.403) (-4673.540) [-4673.566] (-4677.153) -- 0:16:51
49000 -- [-4676.498] (-4673.772) (-4677.418) (-4673.457) * [-4669.763] (-4674.506) (-4673.348) (-4671.441) -- 0:16:49
50000 -- (-4670.029) (-4676.686) [-4667.665] (-4679.263) * [-4669.276] (-4674.980) (-4675.816) (-4672.185) -- 0:16:47
Average standard deviation of split frequencies: 0.028843
51000 -- (-4669.748) (-4681.783) (-4673.388) [-4670.482] * (-4664.193) [-4669.154] (-4677.010) (-4677.950) -- 0:16:44
52000 -- [-4680.257] (-4684.173) (-4677.541) (-4669.478) * (-4672.463) (-4664.773) [-4681.446] (-4670.276) -- 0:16:42
53000 -- [-4673.578] (-4670.010) (-4680.276) (-4674.630) * (-4682.882) (-4664.946) (-4681.802) [-4668.783] -- 0:16:40
54000 -- (-4668.652) (-4673.203) [-4671.316] (-4669.969) * (-4673.658) [-4672.554] (-4677.999) (-4667.461) -- 0:16:38
55000 -- [-4668.737] (-4667.757) (-4674.916) (-4667.057) * (-4671.365) (-4678.988) (-4672.960) [-4668.058] -- 0:16:36
Average standard deviation of split frequencies: 0.023991
56000 -- (-4679.572) [-4661.941] (-4678.436) (-4669.556) * [-4677.981] (-4681.909) (-4670.233) (-4665.787) -- 0:16:34
57000 -- (-4666.721) [-4664.759] (-4669.126) (-4672.060) * (-4665.735) [-4666.863] (-4671.280) (-4681.906) -- 0:16:32
58000 -- (-4679.345) [-4667.167] (-4670.556) (-4680.676) * (-4680.445) [-4665.364] (-4679.032) (-4672.930) -- 0:16:30
59000 -- (-4677.587) [-4680.347] (-4667.237) (-4677.183) * [-4669.532] (-4676.845) (-4667.603) (-4674.478) -- 0:16:28
60000 -- (-4674.014) [-4663.170] (-4670.342) (-4675.812) * [-4661.668] (-4659.335) (-4673.854) (-4675.916) -- 0:16:42
Average standard deviation of split frequencies: 0.028362
61000 -- (-4683.236) (-4668.723) [-4664.546] (-4677.055) * (-4665.588) (-4670.141) (-4671.499) [-4669.643] -- 0:16:40
62000 -- [-4669.052] (-4667.338) (-4666.623) (-4671.009) * (-4676.704) (-4672.478) (-4667.519) [-4670.794] -- 0:16:38
63000 -- (-4665.198) [-4670.825] (-4677.272) (-4678.077) * (-4668.432) (-4679.843) (-4685.629) [-4663.321] -- 0:16:36
64000 -- (-4689.242) (-4681.352) (-4674.708) [-4680.286] * (-4679.305) [-4674.890] (-4675.656) (-4679.615) -- 0:16:34
65000 -- (-4679.061) (-4670.552) (-4665.430) [-4669.122] * (-4676.335) (-4669.929) (-4676.578) [-4667.246] -- 0:16:32
Average standard deviation of split frequencies: 0.026784
66000 -- (-4674.882) (-4666.221) [-4666.555] (-4680.621) * (-4676.506) [-4669.079] (-4668.664) (-4675.336) -- 0:16:30
67000 -- (-4681.849) [-4667.067] (-4674.105) (-4680.437) * [-4667.529] (-4680.594) (-4680.456) (-4663.983) -- 0:16:28
68000 -- (-4674.676) (-4681.757) [-4669.107] (-4666.544) * [-4672.068] (-4678.522) (-4675.244) (-4673.017) -- 0:16:26
69000 -- (-4663.068) (-4673.383) (-4667.680) [-4669.247] * (-4661.745) [-4662.089] (-4674.042) (-4679.910) -- 0:16:24
70000 -- (-4685.374) [-4673.997] (-4675.782) (-4665.980) * (-4669.905) [-4668.405] (-4668.361) (-4670.816) -- 0:16:23
Average standard deviation of split frequencies: 0.028351
71000 -- (-4663.888) [-4668.164] (-4677.545) (-4668.590) * (-4677.300) (-4671.374) (-4679.826) [-4660.817] -- 0:16:21
72000 -- [-4663.858] (-4681.119) (-4672.494) (-4667.278) * (-4666.895) [-4667.177] (-4671.790) (-4685.402) -- 0:16:19
73000 -- (-4669.105) (-4685.895) (-4669.719) [-4662.120] * (-4671.458) [-4668.819] (-4677.864) (-4671.574) -- 0:16:17
74000 -- (-4668.396) (-4683.088) [-4669.808] (-4667.507) * (-4663.481) (-4675.735) (-4670.621) [-4669.046] -- 0:16:16
75000 -- (-4669.381) (-4673.712) [-4673.137] (-4663.488) * [-4670.887] (-4665.694) (-4671.145) (-4673.717) -- 0:16:26
Average standard deviation of split frequencies: 0.023260
76000 -- (-4673.107) (-4668.440) [-4669.050] (-4683.181) * (-4675.966) (-4674.574) (-4669.457) [-4667.831] -- 0:16:24
77000 -- [-4673.767] (-4676.287) (-4669.394) (-4669.175) * [-4669.568] (-4668.857) (-4670.332) (-4669.906) -- 0:16:22
78000 -- (-4679.241) (-4668.690) (-4679.045) [-4673.603] * (-4671.214) [-4662.753] (-4685.881) (-4669.395) -- 0:16:21
79000 -- (-4669.903) (-4673.152) (-4668.105) [-4669.802] * (-4669.789) (-4669.755) (-4675.922) [-4671.038] -- 0:16:19
80000 -- (-4674.680) [-4670.691] (-4668.597) (-4664.328) * (-4672.758) (-4675.492) (-4670.868) [-4668.384] -- 0:16:17
Average standard deviation of split frequencies: 0.019577
81000 -- (-4667.685) (-4677.190) (-4670.243) [-4664.578] * (-4675.111) (-4673.865) (-4668.560) [-4664.986] -- 0:16:15
82000 -- (-4665.633) (-4682.370) (-4669.132) [-4669.497] * (-4686.403) [-4669.865] (-4695.932) (-4675.193) -- 0:16:13
83000 -- (-4672.284) (-4673.476) (-4678.720) [-4667.234] * (-4676.665) (-4679.384) (-4673.522) [-4670.179] -- 0:16:12
84000 -- (-4670.337) (-4661.953) [-4663.475] (-4670.848) * (-4670.997) (-4677.225) [-4673.319] (-4669.767) -- 0:16:10
85000 -- [-4686.135] (-4668.679) (-4663.247) (-4671.090) * (-4674.823) (-4673.320) (-4682.871) [-4678.897] -- 0:16:08
Average standard deviation of split frequencies: 0.021104
86000 -- (-4673.804) (-4670.896) (-4664.734) [-4680.144] * [-4670.351] (-4675.431) (-4663.417) (-4665.348) -- 0:16:07
87000 -- (-4678.125) (-4666.996) (-4663.526) [-4669.568] * (-4671.097) [-4664.927] (-4665.791) (-4664.055) -- 0:16:05
88000 -- (-4662.732) (-4675.049) (-4675.928) [-4671.041] * (-4670.507) (-4664.711) (-4666.315) [-4670.025] -- 0:16:03
89000 -- [-4667.406] (-4667.459) (-4677.690) (-4666.895) * (-4665.065) (-4679.329) [-4665.856] (-4671.349) -- 0:16:02
90000 -- (-4680.125) [-4667.364] (-4683.653) (-4662.906) * (-4671.785) (-4665.354) (-4677.426) [-4668.799] -- 0:16:00
Average standard deviation of split frequencies: 0.021577
91000 -- (-4675.780) (-4665.354) (-4678.902) [-4666.974] * [-4669.068] (-4664.918) (-4666.941) (-4672.177) -- 0:15:58
92000 -- (-4669.571) [-4677.109] (-4677.415) (-4668.130) * (-4666.111) (-4668.930) [-4658.486] (-4682.693) -- 0:16:07
93000 -- (-4668.467) [-4672.467] (-4662.843) (-4670.284) * [-4669.283] (-4672.261) (-4677.050) (-4673.759) -- 0:16:05
94000 -- (-4660.723) (-4664.125) [-4672.948] (-4663.330) * (-4671.454) [-4671.549] (-4667.295) (-4681.253) -- 0:16:03
95000 -- (-4664.624) (-4684.908) (-4672.688) [-4674.854] * (-4670.806) (-4670.607) [-4667.380] (-4680.226) -- 0:16:02
Average standard deviation of split frequencies: 0.021361
96000 -- (-4677.958) (-4667.808) (-4675.418) [-4677.309] * (-4669.630) (-4667.909) (-4679.042) [-4665.963] -- 0:16:00
97000 -- [-4667.176] (-4675.572) (-4682.262) (-4668.897) * (-4666.446) [-4675.763] (-4671.129) (-4671.268) -- 0:15:58
98000 -- [-4666.819] (-4684.084) (-4668.135) (-4663.545) * (-4665.076) (-4683.312) [-4668.869] (-4679.341) -- 0:15:57
99000 -- (-4670.310) (-4674.370) [-4663.327] (-4666.992) * [-4670.409] (-4674.166) (-4668.628) (-4671.856) -- 0:15:55
100000 -- (-4677.459) (-4673.648) (-4678.174) [-4660.926] * [-4663.238] (-4668.711) (-4679.404) (-4672.355) -- 0:15:54
Average standard deviation of split frequencies: 0.022243
101000 -- (-4672.781) (-4672.661) (-4664.688) [-4665.447] * [-4663.615] (-4666.536) (-4682.508) (-4675.579) -- 0:15:52
102000 -- (-4669.613) (-4670.620) [-4669.961] (-4672.781) * [-4672.989] (-4678.148) (-4673.678) (-4670.627) -- 0:15:50
103000 -- (-4696.903) (-4670.533) [-4669.045] (-4676.194) * [-4664.306] (-4672.770) (-4676.434) (-4668.305) -- 0:15:49
104000 -- (-4679.565) (-4673.344) (-4672.771) [-4673.174] * (-4669.464) (-4671.137) (-4688.982) [-4660.814] -- 0:15:47
105000 -- (-4674.636) (-4669.593) [-4676.114] (-4675.169) * [-4669.780] (-4676.722) (-4670.304) (-4677.276) -- 0:15:46
Average standard deviation of split frequencies: 0.019568
106000 -- (-4680.405) (-4687.040) (-4678.089) [-4668.007] * (-4673.683) (-4683.409) (-4667.516) [-4668.152] -- 0:15:44
107000 -- (-4664.029) [-4675.937] (-4669.455) (-4680.773) * (-4663.679) (-4691.995) [-4669.442] (-4667.817) -- 0:15:43
108000 -- (-4661.091) (-4669.373) (-4667.910) [-4670.910] * [-4673.619] (-4670.412) (-4671.506) (-4666.519) -- 0:15:41
109000 -- (-4669.571) [-4674.478] (-4671.926) (-4667.660) * (-4671.349) (-4662.669) (-4679.120) [-4659.788] -- 0:15:48
110000 -- (-4661.954) (-4667.323) (-4685.389) [-4670.693] * (-4670.194) (-4679.789) (-4673.552) [-4663.955] -- 0:15:46
Average standard deviation of split frequencies: 0.019595
111000 -- [-4669.721] (-4668.345) (-4675.438) (-4670.703) * (-4675.364) [-4663.990] (-4679.293) (-4674.105) -- 0:15:45
112000 -- (-4684.881) [-4671.310] (-4686.430) (-4673.019) * [-4676.013] (-4674.897) (-4675.585) (-4665.168) -- 0:15:43
113000 -- (-4670.583) (-4671.964) [-4667.442] (-4669.461) * (-4676.479) [-4669.640] (-4677.360) (-4667.748) -- 0:15:41
114000 -- (-4667.045) (-4682.103) [-4675.660] (-4671.084) * [-4674.066] (-4669.760) (-4672.182) (-4677.708) -- 0:15:40
115000 -- (-4670.124) (-4671.563) (-4671.440) [-4667.842] * [-4666.921] (-4679.056) (-4668.806) (-4674.555) -- 0:15:38
Average standard deviation of split frequencies: 0.022351
116000 -- (-4664.624) (-4683.507) (-4666.914) [-4676.252] * [-4661.009] (-4669.797) (-4669.209) (-4679.435) -- 0:15:37
117000 -- (-4671.776) (-4666.154) [-4668.433] (-4678.662) * [-4671.318] (-4670.811) (-4670.841) (-4681.980) -- 0:15:35
118000 -- (-4666.560) (-4668.116) [-4666.324] (-4676.785) * (-4663.729) (-4675.683) (-4679.348) [-4671.990] -- 0:15:34
119000 -- (-4676.661) (-4676.928) [-4675.714] (-4676.910) * (-4672.618) (-4673.388) (-4666.784) [-4671.888] -- 0:15:32
120000 -- (-4679.839) (-4673.530) [-4664.512] (-4666.030) * (-4687.982) [-4671.702] (-4678.124) (-4678.595) -- 0:15:31
Average standard deviation of split frequencies: 0.025393
121000 -- (-4684.168) (-4687.040) (-4675.328) [-4671.377] * (-4673.782) [-4671.237] (-4670.744) (-4694.839) -- 0:15:29
122000 -- (-4668.394) [-4663.095] (-4667.634) (-4680.484) * [-4666.264] (-4668.323) (-4672.346) (-4672.757) -- 0:15:28
123000 -- (-4682.707) [-4670.201] (-4666.187) (-4668.251) * (-4682.734) (-4680.630) [-4664.543] (-4680.593) -- 0:15:26
124000 -- (-4688.130) (-4668.037) [-4662.736] (-4670.562) * (-4665.972) [-4675.613] (-4668.305) (-4677.856) -- 0:15:25
125000 -- (-4679.803) (-4677.911) [-4675.863] (-4680.928) * [-4669.995] (-4675.223) (-4683.367) (-4666.817) -- 0:15:24
Average standard deviation of split frequencies: 0.020577
126000 -- (-4667.366) (-4670.598) (-4665.289) [-4670.669] * (-4685.176) (-4674.382) [-4674.712] (-4677.095) -- 0:15:22
127000 -- (-4675.632) [-4667.444] (-4666.840) (-4681.403) * [-4669.401] (-4678.578) (-4671.227) (-4673.358) -- 0:15:21
128000 -- (-4662.485) [-4663.794] (-4681.911) (-4677.766) * [-4669.520] (-4674.113) (-4678.250) (-4669.335) -- 0:15:19
129000 -- (-4675.244) (-4668.806) [-4668.721] (-4665.344) * (-4672.788) (-4675.269) (-4682.544) [-4663.169] -- 0:15:25
130000 -- (-4682.886) [-4672.903] (-4669.611) (-4669.294) * (-4676.963) [-4669.813] (-4677.246) (-4670.489) -- 0:15:23
Average standard deviation of split frequencies: 0.020023
131000 -- (-4665.714) [-4671.150] (-4666.034) (-4671.660) * (-4667.142) (-4670.959) [-4669.660] (-4674.944) -- 0:15:22
132000 -- [-4671.779] (-4673.498) (-4677.316) (-4665.613) * (-4671.329) [-4673.627] (-4680.297) (-4673.795) -- 0:15:20
133000 -- (-4675.592) (-4664.279) [-4674.088] (-4666.164) * [-4667.352] (-4664.404) (-4671.899) (-4680.841) -- 0:15:19
134000 -- (-4673.580) [-4664.842] (-4678.626) (-4671.594) * [-4669.921] (-4671.282) (-4669.873) (-4672.156) -- 0:15:17
135000 -- [-4662.022] (-4666.975) (-4668.923) (-4667.681) * (-4674.934) (-4668.636) (-4671.645) [-4665.380] -- 0:15:16
Average standard deviation of split frequencies: 0.020971
136000 -- (-4673.705) (-4670.965) [-4685.244] (-4674.870) * (-4657.852) [-4663.624] (-4670.658) (-4671.357) -- 0:15:14
137000 -- [-4668.896] (-4678.092) (-4682.920) (-4673.278) * [-4666.705] (-4674.796) (-4688.771) (-4667.244) -- 0:15:13
138000 -- (-4665.709) (-4672.503) [-4673.060] (-4665.630) * (-4671.098) (-4670.550) (-4676.957) [-4667.709] -- 0:15:11
139000 -- (-4667.376) (-4673.724) [-4667.307] (-4673.384) * (-4673.284) (-4665.062) (-4672.859) [-4671.144] -- 0:15:10
140000 -- (-4669.639) [-4671.183] (-4674.730) (-4670.976) * (-4670.018) (-4678.332) [-4665.147] (-4669.453) -- 0:15:09
Average standard deviation of split frequencies: 0.018264
141000 -- [-4676.191] (-4678.052) (-4671.056) (-4667.971) * (-4669.027) (-4678.357) [-4670.403] (-4664.539) -- 0:15:07
142000 -- (-4670.363) [-4678.567] (-4669.118) (-4668.384) * [-4671.599] (-4670.427) (-4675.557) (-4669.844) -- 0:15:06
143000 -- (-4675.441) (-4664.279) (-4666.855) [-4665.068] * (-4674.416) [-4667.653] (-4673.217) (-4675.471) -- 0:15:04
144000 -- [-4673.107] (-4666.495) (-4674.573) (-4679.744) * (-4666.653) [-4668.113] (-4663.711) (-4668.008) -- 0:15:03
145000 -- (-4665.718) [-4673.041] (-4666.169) (-4664.460) * (-4662.448) [-4666.607] (-4671.659) (-4669.546) -- 0:15:08
Average standard deviation of split frequencies: 0.017597
146000 -- (-4677.121) (-4675.690) [-4666.827] (-4667.372) * (-4680.581) (-4670.041) (-4667.897) [-4668.562] -- 0:15:06
147000 -- (-4668.062) (-4668.173) [-4665.979] (-4667.007) * (-4674.951) (-4672.574) (-4671.228) [-4673.521] -- 0:15:05
148000 -- [-4671.585] (-4668.184) (-4667.308) (-4674.791) * [-4670.947] (-4665.106) (-4676.402) (-4674.629) -- 0:15:03
149000 -- [-4662.603] (-4668.583) (-4674.077) (-4678.687) * (-4663.537) (-4677.706) (-4669.220) [-4670.533] -- 0:15:02
150000 -- (-4665.602) (-4667.788) (-4668.723) [-4665.543] * (-4673.183) (-4661.309) (-4665.548) [-4671.607] -- 0:15:01
Average standard deviation of split frequencies: 0.015800
151000 -- (-4676.282) (-4660.252) (-4675.349) [-4671.268] * (-4664.361) (-4663.953) [-4667.689] (-4668.476) -- 0:14:59
152000 -- (-4671.929) [-4675.586] (-4675.721) (-4678.744) * [-4667.979] (-4672.213) (-4664.450) (-4677.292) -- 0:14:58
153000 -- (-4676.619) (-4669.785) [-4668.278] (-4668.829) * [-4666.221] (-4664.254) (-4665.826) (-4671.259) -- 0:14:56
154000 -- (-4667.099) (-4674.435) [-4669.518] (-4679.237) * (-4667.112) [-4668.563] (-4672.014) (-4672.889) -- 0:14:55
155000 -- [-4668.802] (-4681.350) (-4674.199) (-4679.395) * (-4674.025) (-4663.172) [-4682.080] (-4668.679) -- 0:14:54
Average standard deviation of split frequencies: 0.014656
156000 -- [-4668.930] (-4669.900) (-4670.103) (-4682.647) * (-4667.822) (-4666.896) (-4682.162) [-4670.751] -- 0:14:52
157000 -- [-4668.675] (-4679.870) (-4667.537) (-4675.856) * (-4666.250) [-4674.024] (-4668.465) (-4669.179) -- 0:14:51
158000 -- (-4680.408) (-4675.483) [-4660.253] (-4685.338) * (-4676.741) (-4675.831) (-4671.417) [-4670.989] -- 0:14:49
159000 -- [-4674.379] (-4678.487) (-4661.510) (-4675.245) * (-4669.816) [-4661.864] (-4672.063) (-4671.171) -- 0:14:48
160000 -- (-4678.207) (-4671.155) [-4668.646] (-4674.296) * (-4670.916) [-4665.754] (-4674.440) (-4671.885) -- 0:14:52
Average standard deviation of split frequencies: 0.013643
161000 -- (-4676.522) [-4674.523] (-4670.062) (-4671.909) * (-4685.125) (-4680.778) [-4665.262] (-4676.421) -- 0:14:51
162000 -- (-4670.111) (-4667.821) [-4672.922] (-4681.578) * [-4665.924] (-4660.045) (-4684.289) (-4677.461) -- 0:14:49
163000 -- (-4670.163) [-4674.771] (-4681.619) (-4670.252) * (-4663.624) (-4683.320) (-4671.637) [-4661.505] -- 0:14:48
164000 -- (-4679.904) [-4673.534] (-4675.760) (-4667.222) * (-4672.862) (-4674.311) [-4675.914] (-4673.675) -- 0:14:46
165000 -- (-4671.510) (-4666.506) (-4672.624) [-4664.704] * [-4668.424] (-4670.052) (-4682.542) (-4669.564) -- 0:14:45
Average standard deviation of split frequencies: 0.010933
166000 -- (-4665.860) (-4673.431) (-4673.768) [-4664.916] * (-4686.998) (-4676.388) (-4687.800) [-4658.563] -- 0:14:44
167000 -- (-4675.357) [-4676.644] (-4675.019) (-4674.317) * [-4671.468] (-4670.361) (-4672.500) (-4666.846) -- 0:14:42
168000 -- (-4668.656) [-4670.364] (-4684.337) (-4679.653) * (-4671.622) [-4670.311] (-4678.602) (-4667.492) -- 0:14:41
169000 -- (-4674.019) (-4665.320) (-4676.395) [-4659.487] * (-4673.550) (-4668.722) [-4668.608] (-4675.342) -- 0:14:40
170000 -- [-4666.535] (-4677.759) (-4665.456) (-4685.473) * [-4673.696] (-4681.285) (-4680.286) (-4687.436) -- 0:14:38
Average standard deviation of split frequencies: 0.011325
171000 -- [-4663.179] (-4677.910) (-4682.092) (-4670.937) * [-4677.209] (-4675.381) (-4692.102) (-4675.656) -- 0:14:37
172000 -- (-4667.745) (-4671.206) (-4679.838) [-4665.770] * (-4668.416) (-4668.830) [-4669.654] (-4674.065) -- 0:14:36
173000 -- (-4681.161) (-4665.011) [-4672.104] (-4676.772) * (-4675.506) [-4678.546] (-4675.793) (-4672.206) -- 0:14:34
174000 -- (-4670.269) [-4669.543] (-4667.962) (-4668.216) * (-4687.097) (-4672.745) [-4668.572] (-4672.389) -- 0:14:33
175000 -- (-4669.205) (-4668.899) [-4667.669] (-4673.790) * (-4674.480) (-4680.015) (-4674.991) [-4664.219] -- 0:14:32
Average standard deviation of split frequencies: 0.011249
176000 -- (-4679.290) [-4669.035] (-4673.866) (-4667.668) * (-4686.193) (-4677.534) [-4672.588] (-4667.835) -- 0:14:30
177000 -- (-4673.270) [-4670.669] (-4677.195) (-4673.185) * (-4679.626) [-4669.246] (-4674.913) (-4678.310) -- 0:14:29
178000 -- (-4675.676) [-4662.634] (-4674.836) (-4673.999) * (-4676.020) [-4667.698] (-4670.827) (-4678.935) -- 0:14:28
179000 -- (-4677.660) (-4670.415) [-4667.934] (-4685.686) * (-4665.747) [-4668.989] (-4669.708) (-4668.326) -- 0:14:31
180000 -- (-4677.382) [-4666.073] (-4673.155) (-4675.290) * [-4674.700] (-4670.453) (-4672.252) (-4669.707) -- 0:14:30
Average standard deviation of split frequencies: 0.011350
181000 -- (-4674.468) (-4668.985) [-4671.474] (-4674.696) * (-4679.015) [-4663.835] (-4666.665) (-4663.681) -- 0:14:28
182000 -- (-4677.657) [-4666.102] (-4674.008) (-4673.020) * (-4670.393) (-4678.893) (-4668.111) [-4670.509] -- 0:14:27
183000 -- (-4671.993) (-4674.695) (-4676.093) [-4667.169] * (-4669.224) (-4674.586) [-4668.940] (-4686.426) -- 0:14:26
184000 -- [-4667.910] (-4678.031) (-4691.210) (-4674.345) * [-4669.042] (-4679.970) (-4679.359) (-4662.762) -- 0:14:24
185000 -- (-4675.082) (-4665.574) (-4671.336) [-4677.232] * (-4661.464) [-4674.655] (-4678.245) (-4671.970) -- 0:14:23
Average standard deviation of split frequencies: 0.012039
186000 -- (-4670.415) (-4667.078) (-4664.400) [-4665.457] * (-4670.592) (-4665.827) (-4678.572) [-4675.485] -- 0:14:22
187000 -- (-4679.487) [-4668.444] (-4673.775) (-4672.354) * (-4672.074) [-4667.210] (-4676.210) (-4671.645) -- 0:14:20
188000 -- (-4666.084) (-4674.625) (-4671.691) [-4672.295] * [-4668.227] (-4675.823) (-4684.999) (-4671.449) -- 0:14:19
189000 -- (-4670.109) (-4686.676) [-4669.478] (-4666.897) * (-4674.381) (-4673.204) [-4672.544] (-4664.168) -- 0:14:18
190000 -- (-4665.143) [-4677.637] (-4681.257) (-4669.839) * (-4681.250) (-4671.459) [-4679.506] (-4674.869) -- 0:14:16
Average standard deviation of split frequencies: 0.010755
191000 -- (-4671.681) (-4686.880) (-4678.584) [-4670.559] * [-4665.890] (-4672.937) (-4672.843) (-4676.970) -- 0:14:15
192000 -- [-4670.385] (-4674.630) (-4674.438) (-4671.430) * [-4665.275] (-4680.983) (-4680.865) (-4683.692) -- 0:14:14
193000 -- (-4666.427) (-4674.861) [-4673.054] (-4673.935) * (-4683.733) (-4670.718) (-4674.282) [-4670.329] -- 0:14:12
194000 -- [-4672.303] (-4674.608) (-4669.887) (-4674.281) * [-4673.715] (-4666.921) (-4668.843) (-4660.267) -- 0:14:11
195000 -- (-4672.287) [-4661.825] (-4668.445) (-4686.956) * (-4668.613) (-4666.817) (-4673.874) [-4672.305] -- 0:14:10
Average standard deviation of split frequencies: 0.009741
196000 -- [-4680.951] (-4675.175) (-4667.146) (-4671.192) * (-4684.808) (-4670.852) (-4672.028) [-4665.752] -- 0:14:13
197000 -- (-4682.430) (-4665.115) [-4661.090] (-4669.451) * [-4671.482] (-4670.581) (-4669.353) (-4665.628) -- 0:14:11
198000 -- (-4673.608) (-4672.274) [-4670.329] (-4662.423) * (-4670.472) (-4660.153) [-4669.472] (-4671.617) -- 0:14:10
199000 -- (-4679.219) [-4666.896] (-4676.866) (-4678.356) * (-4671.574) (-4668.583) [-4668.573] (-4676.976) -- 0:14:09
200000 -- (-4675.013) [-4672.188] (-4665.248) (-4670.221) * (-4668.850) (-4668.410) [-4664.006] (-4672.774) -- 0:14:08
Average standard deviation of split frequencies: 0.010102
201000 -- [-4665.548] (-4672.616) (-4666.588) (-4668.937) * (-4663.991) (-4682.411) (-4675.347) [-4661.001] -- 0:14:06
202000 -- [-4660.915] (-4687.109) (-4675.474) (-4662.192) * (-4666.707) (-4680.304) [-4668.451] (-4668.191) -- 0:14:05
203000 -- (-4673.057) (-4674.672) (-4676.180) [-4663.058] * [-4661.951] (-4667.281) (-4666.426) (-4669.275) -- 0:14:04
204000 -- (-4673.829) (-4676.214) (-4671.412) [-4670.104] * [-4668.928] (-4677.206) (-4673.948) (-4673.588) -- 0:14:02
205000 -- (-4681.289) (-4691.025) (-4673.990) [-4671.948] * [-4666.931] (-4669.489) (-4669.878) (-4672.800) -- 0:14:01
Average standard deviation of split frequencies: 0.010412
206000 -- (-4667.548) (-4673.654) (-4674.235) [-4676.959] * [-4668.787] (-4679.526) (-4674.302) (-4670.145) -- 0:14:00
207000 -- (-4672.349) [-4668.992] (-4669.336) (-4662.528) * (-4670.005) (-4681.389) [-4673.618] (-4668.072) -- 0:13:58
208000 -- (-4682.265) (-4676.118) [-4667.434] (-4677.055) * (-4675.080) [-4674.850] (-4671.004) (-4664.801) -- 0:13:57
209000 -- (-4666.662) (-4672.418) (-4667.262) [-4664.653] * (-4671.453) (-4674.309) (-4668.588) [-4668.320] -- 0:13:56
210000 -- [-4674.863] (-4668.233) (-4676.619) (-4675.891) * (-4677.281) [-4667.794] (-4665.393) (-4676.576) -- 0:13:55
Average standard deviation of split frequencies: 0.009958
211000 -- (-4670.871) (-4673.560) (-4679.402) [-4674.814] * (-4673.972) (-4677.805) (-4671.871) [-4672.809] -- 0:13:53
212000 -- (-4673.453) (-4668.123) (-4674.019) [-4678.253] * (-4669.174) [-4668.124] (-4678.604) (-4670.095) -- 0:13:52
213000 -- (-4673.569) [-4668.855] (-4676.761) (-4675.703) * (-4673.281) (-4683.072) [-4675.695] (-4684.526) -- 0:13:55
214000 -- (-4684.452) [-4664.330] (-4671.971) (-4676.578) * (-4665.202) (-4677.858) (-4666.057) [-4664.499] -- 0:13:53
215000 -- [-4670.208] (-4682.023) (-4665.776) (-4667.050) * (-4671.752) (-4658.184) (-4679.105) [-4662.482] -- 0:13:52
Average standard deviation of split frequencies: 0.010367
216000 -- (-4675.747) [-4666.645] (-4674.800) (-4681.474) * (-4670.449) (-4663.510) (-4669.610) [-4662.477] -- 0:13:51
217000 -- (-4669.547) (-4681.654) [-4661.832] (-4671.691) * (-4671.619) (-4666.693) (-4684.598) [-4663.741] -- 0:13:49
218000 -- (-4672.309) (-4672.352) [-4673.732] (-4677.448) * [-4664.948] (-4668.876) (-4670.360) (-4673.637) -- 0:13:48
219000 -- [-4673.757] (-4664.551) (-4673.181) (-4683.678) * (-4671.776) (-4682.377) [-4672.309] (-4681.706) -- 0:13:47
220000 -- (-4680.069) (-4670.771) (-4669.403) [-4664.267] * (-4690.398) [-4664.740] (-4673.046) (-4668.050) -- 0:13:46
Average standard deviation of split frequencies: 0.011536
221000 -- [-4665.345] (-4671.004) (-4671.754) (-4669.730) * (-4669.371) [-4670.189] (-4678.461) (-4672.641) -- 0:13:44
222000 -- (-4674.444) (-4680.876) [-4669.206] (-4674.948) * (-4675.232) (-4671.421) [-4663.055] (-4672.081) -- 0:13:43
223000 -- (-4674.815) (-4684.417) [-4682.150] (-4676.413) * (-4660.446) (-4684.524) [-4672.161] (-4669.190) -- 0:13:42
224000 -- (-4685.170) (-4669.064) (-4668.238) [-4664.509] * [-4670.223] (-4669.335) (-4687.283) (-4668.224) -- 0:13:41
225000 -- [-4660.397] (-4664.568) (-4679.261) (-4676.373) * (-4671.639) [-4667.278] (-4681.279) (-4676.800) -- 0:13:39
Average standard deviation of split frequencies: 0.010742
226000 -- (-4668.290) (-4674.164) [-4661.407] (-4674.918) * (-4667.728) [-4662.648] (-4681.269) (-4665.865) -- 0:13:38
227000 -- (-4675.586) [-4673.332] (-4666.575) (-4661.762) * (-4672.133) [-4662.237] (-4677.039) (-4668.726) -- 0:13:37
228000 -- (-4671.955) (-4686.433) (-4668.755) [-4664.414] * (-4663.408) [-4667.662] (-4675.583) (-4660.788) -- 0:13:36
229000 -- (-4669.797) (-4668.498) [-4663.383] (-4660.570) * (-4681.321) (-4669.624) (-4678.531) [-4670.263] -- 0:13:38
230000 -- [-4658.786] (-4682.198) (-4669.656) (-4667.300) * (-4668.418) [-4665.710] (-4673.060) (-4680.926) -- 0:13:36
Average standard deviation of split frequencies: 0.010627
231000 -- (-4670.336) (-4672.135) [-4670.275] (-4665.158) * (-4676.428) (-4679.201) (-4671.222) [-4670.054] -- 0:13:35
232000 -- [-4664.240] (-4673.297) (-4662.478) (-4672.048) * (-4672.608) [-4674.341] (-4675.373) (-4666.931) -- 0:13:34
233000 -- (-4670.409) (-4667.339) (-4676.659) [-4662.149] * (-4688.731) (-4667.297) [-4675.059] (-4674.676) -- 0:13:33
234000 -- (-4673.928) (-4667.066) (-4659.241) [-4663.096] * [-4672.299] (-4676.788) (-4670.739) (-4673.126) -- 0:13:31
235000 -- (-4670.547) [-4667.042] (-4671.419) (-4663.403) * [-4659.302] (-4673.609) (-4678.862) (-4669.944) -- 0:13:30
Average standard deviation of split frequencies: 0.009987
236000 -- (-4672.965) [-4670.145] (-4668.685) (-4679.406) * (-4673.757) (-4677.890) [-4667.389] (-4675.501) -- 0:13:29
237000 -- (-4671.960) [-4675.887] (-4665.951) (-4671.726) * [-4667.021] (-4670.372) (-4674.706) (-4663.518) -- 0:13:28
238000 -- (-4667.082) [-4672.877] (-4684.632) (-4670.096) * (-4675.458) (-4680.184) [-4674.326] (-4670.345) -- 0:13:26
239000 -- [-4665.872] (-4686.682) (-4677.175) (-4671.367) * (-4667.408) (-4677.201) [-4672.209] (-4672.283) -- 0:13:25
240000 -- [-4667.237] (-4676.328) (-4673.133) (-4674.585) * [-4668.871] (-4671.846) (-4674.764) (-4671.386) -- 0:13:24
Average standard deviation of split frequencies: 0.010675
241000 -- [-4674.704] (-4689.380) (-4667.037) (-4677.335) * (-4667.708) [-4670.951] (-4682.187) (-4663.172) -- 0:13:23
242000 -- (-4676.867) (-4682.790) [-4663.362] (-4668.714) * [-4669.560] (-4677.718) (-4675.064) (-4676.325) -- 0:13:21
243000 -- (-4673.261) (-4671.541) [-4665.975] (-4675.073) * (-4677.895) (-4672.403) (-4665.274) [-4664.947] -- 0:13:23
244000 -- (-4672.219) (-4667.837) [-4669.435] (-4672.287) * (-4679.595) (-4667.032) (-4666.193) [-4662.935] -- 0:13:22
245000 -- (-4662.891) [-4665.612] (-4674.633) (-4675.237) * [-4669.124] (-4687.563) (-4658.042) (-4675.100) -- 0:13:21
Average standard deviation of split frequencies: 0.010923
246000 -- (-4665.362) (-4667.870) [-4668.992] (-4690.303) * (-4677.328) (-4675.073) (-4664.848) [-4667.055] -- 0:13:19
247000 -- [-4664.785] (-4673.323) (-4679.093) (-4676.422) * [-4667.551] (-4670.756) (-4669.705) (-4669.894) -- 0:13:18
248000 -- (-4670.609) (-4662.904) (-4671.350) [-4667.026] * (-4670.769) (-4669.091) (-4663.798) [-4662.510] -- 0:13:17
249000 -- (-4665.879) [-4659.069] (-4673.785) (-4676.800) * (-4673.793) (-4670.308) [-4665.542] (-4673.828) -- 0:13:16
250000 -- (-4671.944) (-4664.080) (-4673.332) [-4671.007] * (-4672.199) (-4666.884) [-4663.891] (-4665.165) -- 0:13:15
Average standard deviation of split frequencies: 0.011096
251000 -- (-4667.040) [-4667.755] (-4674.178) (-4668.561) * (-4679.293) (-4673.093) (-4668.802) [-4672.838] -- 0:13:13
252000 -- [-4665.103] (-4671.512) (-4677.602) (-4678.094) * (-4665.267) [-4669.295] (-4668.123) (-4671.676) -- 0:13:12
253000 -- [-4664.616] (-4676.356) (-4677.554) (-4666.821) * (-4677.812) [-4664.784] (-4672.351) (-4671.290) -- 0:13:11
254000 -- (-4688.175) (-4672.487) (-4672.000) [-4671.346] * (-4670.953) [-4664.607] (-4678.608) (-4673.101) -- 0:13:10
255000 -- (-4671.028) (-4678.836) [-4669.694] (-4671.850) * (-4685.762) (-4675.441) (-4671.977) [-4672.727] -- 0:13:08
Average standard deviation of split frequencies: 0.012614
256000 -- (-4670.617) [-4667.125] (-4678.732) (-4681.216) * (-4669.185) (-4674.026) (-4676.724) [-4674.292] -- 0:13:07
257000 -- [-4674.670] (-4671.675) (-4673.095) (-4673.219) * (-4669.302) (-4671.397) (-4664.416) [-4662.572] -- 0:13:06
258000 -- (-4665.537) (-4672.455) (-4663.725) [-4670.014] * (-4673.418) (-4672.385) (-4668.488) [-4670.096] -- 0:13:05
259000 -- (-4675.622) (-4678.724) [-4670.870] (-4677.688) * (-4671.645) (-4671.291) [-4660.795] (-4675.617) -- 0:13:06
260000 -- (-4672.307) [-4673.990] (-4683.298) (-4667.864) * (-4665.816) (-4679.418) [-4665.762] (-4683.874) -- 0:13:05
Average standard deviation of split frequencies: 0.011845
261000 -- [-4676.380] (-4681.963) (-4662.464) (-4672.461) * (-4667.796) [-4672.421] (-4669.347) (-4680.844) -- 0:13:04
262000 -- (-4665.975) [-4675.880] (-4680.630) (-4665.607) * (-4676.928) [-4666.747] (-4675.353) (-4670.219) -- 0:13:03
263000 -- [-4673.836] (-4691.929) (-4677.192) (-4664.399) * [-4670.802] (-4675.237) (-4674.593) (-4668.542) -- 0:13:01
264000 -- (-4684.108) [-4670.443] (-4669.360) (-4662.751) * (-4667.864) (-4673.279) [-4671.361] (-4666.720) -- 0:13:00
265000 -- (-4671.093) (-4679.572) [-4669.066] (-4671.839) * (-4674.597) (-4674.068) (-4669.932) [-4663.878] -- 0:12:59
Average standard deviation of split frequencies: 0.011342
266000 -- (-4668.166) (-4683.580) (-4672.562) [-4670.015] * (-4683.724) (-4670.996) (-4666.870) [-4672.134] -- 0:12:58
267000 -- [-4660.575] (-4676.698) (-4675.154) (-4670.248) * [-4670.960] (-4667.710) (-4681.646) (-4671.130) -- 0:12:56
268000 -- (-4667.306) (-4673.353) (-4676.148) [-4667.065] * [-4673.721] (-4678.247) (-4673.353) (-4671.400) -- 0:12:55
269000 -- (-4684.383) [-4669.909] (-4667.787) (-4676.418) * (-4679.541) (-4666.356) [-4678.197] (-4667.227) -- 0:12:54
270000 -- (-4677.454) [-4668.680] (-4680.155) (-4675.019) * (-4669.898) (-4681.509) (-4679.945) [-4664.763] -- 0:12:53
Average standard deviation of split frequencies: 0.011408
271000 -- (-4673.961) [-4666.551] (-4669.382) (-4681.707) * (-4664.367) (-4669.596) (-4673.489) [-4667.911] -- 0:12:52
272000 -- (-4691.768) (-4673.456) [-4654.495] (-4665.823) * (-4665.744) (-4679.150) [-4670.671] (-4671.351) -- 0:12:50
273000 -- (-4680.187) [-4665.162] (-4665.059) (-4670.064) * (-4672.840) (-4677.480) (-4673.969) [-4668.556] -- 0:12:49
274000 -- (-4678.185) (-4672.285) [-4674.065] (-4676.480) * [-4663.025] (-4670.739) (-4668.062) (-4672.071) -- 0:12:48
275000 -- (-4669.915) (-4677.476) [-4671.915] (-4673.583) * (-4670.410) (-4672.493) (-4665.798) [-4664.289] -- 0:12:47
Average standard deviation of split frequencies: 0.009821
276000 -- (-4681.140) (-4678.062) (-4672.000) [-4668.534] * [-4674.847] (-4684.667) (-4668.823) (-4674.000) -- 0:12:45
277000 -- (-4681.498) (-4669.365) [-4664.502] (-4677.791) * (-4672.778) (-4665.189) (-4658.798) [-4661.599] -- 0:12:47
278000 -- [-4665.249] (-4668.493) (-4681.988) (-4679.153) * (-4670.681) (-4664.697) [-4673.211] (-4666.357) -- 0:12:46
279000 -- (-4665.508) [-4665.912] (-4666.911) (-4669.092) * (-4690.290) [-4673.676] (-4667.668) (-4666.071) -- 0:12:44
280000 -- (-4695.531) (-4669.690) [-4672.122] (-4672.657) * (-4672.963) (-4670.959) (-4665.364) [-4664.219] -- 0:12:43
Average standard deviation of split frequencies: 0.010329
281000 -- (-4684.735) (-4676.167) (-4674.430) [-4667.877] * (-4673.182) (-4675.836) (-4669.055) [-4658.625] -- 0:12:42
282000 -- [-4672.966] (-4669.727) (-4678.036) (-4676.976) * [-4667.715] (-4675.054) (-4668.333) (-4668.596) -- 0:12:41
283000 -- (-4677.903) (-4675.785) (-4665.897) [-4669.865] * (-4671.206) (-4679.495) [-4661.182] (-4665.120) -- 0:12:40
284000 -- (-4683.446) (-4671.628) [-4665.177] (-4670.029) * (-4669.450) [-4661.013] (-4664.166) (-4674.038) -- 0:12:38
285000 -- (-4684.209) [-4665.915] (-4673.086) (-4665.541) * (-4671.159) (-4685.162) [-4664.701] (-4667.045) -- 0:12:37
Average standard deviation of split frequencies: 0.010219
286000 -- (-4666.623) (-4666.709) (-4679.086) [-4665.095] * [-4667.914] (-4659.490) (-4679.805) (-4666.739) -- 0:12:36
287000 -- [-4675.748] (-4677.707) (-4664.091) (-4664.497) * (-4676.804) [-4662.754] (-4671.391) (-4678.482) -- 0:12:35
288000 -- (-4681.043) [-4674.017] (-4674.159) (-4673.725) * (-4669.904) [-4673.511] (-4669.949) (-4667.705) -- 0:12:34
289000 -- (-4669.120) (-4670.571) [-4678.358] (-4680.018) * [-4671.574] (-4677.589) (-4668.778) (-4674.543) -- 0:12:32
290000 -- [-4668.001] (-4680.948) (-4663.989) (-4686.083) * [-4676.805] (-4667.167) (-4670.442) (-4669.745) -- 0:12:31
Average standard deviation of split frequencies: 0.011353
291000 -- (-4678.354) (-4670.353) (-4668.062) [-4672.024] * [-4668.815] (-4667.832) (-4670.922) (-4675.980) -- 0:12:30
292000 -- (-4670.850) (-4680.409) [-4667.896] (-4670.231) * [-4668.771] (-4666.544) (-4678.058) (-4667.173) -- 0:12:29
293000 -- (-4681.388) [-4665.289] (-4677.657) (-4679.005) * (-4672.837) (-4664.950) [-4662.331] (-4679.369) -- 0:12:28
294000 -- (-4674.202) [-4663.982] (-4674.208) (-4665.333) * (-4675.716) (-4671.103) [-4663.544] (-4664.204) -- 0:12:26
295000 -- (-4671.673) [-4662.381] (-4678.865) (-4675.852) * (-4677.191) [-4674.663] (-4667.870) (-4673.595) -- 0:12:28
Average standard deviation of split frequencies: 0.011546
296000 -- [-4661.944] (-4696.339) (-4664.821) (-4667.199) * (-4683.759) (-4681.355) (-4670.346) [-4668.572] -- 0:12:26
297000 -- (-4672.247) (-4672.153) (-4688.177) [-4677.698] * (-4683.065) (-4679.263) [-4669.227] (-4666.736) -- 0:12:25
298000 -- (-4668.463) (-4680.408) [-4680.128] (-4676.980) * [-4670.233] (-4673.254) (-4667.967) (-4671.550) -- 0:12:24
299000 -- [-4673.112] (-4679.142) (-4665.558) (-4667.489) * [-4676.938] (-4673.112) (-4672.669) (-4683.527) -- 0:12:23
300000 -- (-4664.639) (-4666.094) [-4662.232] (-4671.455) * (-4670.165) (-4683.732) [-4662.816] (-4672.260) -- 0:12:22
Average standard deviation of split frequencies: 0.011367
301000 -- (-4671.344) (-4673.077) [-4665.750] (-4678.423) * [-4671.374] (-4667.334) (-4668.460) (-4675.989) -- 0:12:20
302000 -- (-4681.790) [-4669.337] (-4666.696) (-4677.364) * (-4671.988) [-4665.721] (-4662.680) (-4672.781) -- 0:12:19
303000 -- (-4674.284) (-4681.611) (-4672.510) [-4663.879] * (-4671.526) (-4671.612) (-4663.480) [-4676.419] -- 0:12:18
304000 -- [-4677.753] (-4676.367) (-4674.154) (-4683.287) * (-4667.829) [-4667.725] (-4662.757) (-4676.901) -- 0:12:17
305000 -- (-4680.611) (-4668.363) [-4666.149] (-4672.252) * (-4685.955) (-4680.828) [-4669.032] (-4662.959) -- 0:12:16
Average standard deviation of split frequencies: 0.010861
306000 -- (-4684.816) [-4667.559] (-4673.528) (-4680.976) * (-4669.534) [-4677.680] (-4669.444) (-4665.979) -- 0:12:14
307000 -- [-4664.764] (-4673.686) (-4671.680) (-4673.191) * (-4662.345) (-4667.103) [-4667.278] (-4678.114) -- 0:12:13
308000 -- (-4680.981) [-4665.141] (-4671.191) (-4665.162) * [-4671.439] (-4673.769) (-4664.888) (-4675.556) -- 0:12:12
309000 -- (-4668.878) [-4671.775] (-4681.327) (-4665.897) * (-4672.943) (-4676.944) (-4679.117) [-4672.279] -- 0:12:13
310000 -- (-4672.601) [-4675.847] (-4673.135) (-4685.976) * (-4672.833) [-4676.340] (-4671.728) (-4688.803) -- 0:12:12
Average standard deviation of split frequencies: 0.010546
311000 -- [-4667.906] (-4671.543) (-4676.732) (-4671.445) * (-4681.890) [-4674.218] (-4669.298) (-4681.539) -- 0:12:11
312000 -- [-4668.798] (-4673.702) (-4673.245) (-4675.450) * (-4675.309) (-4667.298) (-4679.404) [-4674.851] -- 0:12:09
313000 -- (-4665.974) (-4667.861) [-4667.117] (-4662.482) * (-4669.311) [-4668.876] (-4680.171) (-4668.958) -- 0:12:08
314000 -- (-4669.424) [-4669.980] (-4670.063) (-4669.179) * [-4674.094] (-4686.070) (-4672.200) (-4667.316) -- 0:12:07
315000 -- (-4671.035) [-4669.054] (-4670.036) (-4669.159) * (-4667.762) (-4686.559) (-4671.078) [-4661.917] -- 0:12:06
Average standard deviation of split frequencies: 0.011487
316000 -- (-4674.610) (-4668.177) [-4670.166] (-4666.325) * (-4663.215) (-4676.961) (-4669.759) [-4664.421] -- 0:12:05
317000 -- (-4680.487) (-4664.875) [-4674.403] (-4670.718) * (-4660.665) (-4675.890) (-4680.487) [-4664.732] -- 0:12:03
318000 -- (-4667.932) [-4660.054] (-4680.650) (-4669.870) * (-4668.948) (-4676.926) (-4685.087) [-4667.961] -- 0:12:02
319000 -- [-4671.578] (-4670.034) (-4671.403) (-4669.981) * (-4668.257) (-4683.636) [-4671.865] (-4673.227) -- 0:12:01
320000 -- (-4672.570) (-4671.467) [-4672.386] (-4678.322) * [-4676.174] (-4675.130) (-4678.897) (-4667.065) -- 0:12:00
Average standard deviation of split frequencies: 0.011687
321000 -- (-4665.103) (-4660.461) [-4663.183] (-4666.800) * (-4661.557) (-4674.285) [-4678.988] (-4674.509) -- 0:11:59
322000 -- [-4668.811] (-4678.639) (-4668.286) (-4673.631) * [-4670.049] (-4670.645) (-4684.228) (-4670.266) -- 0:11:58
323000 -- (-4664.828) (-4672.432) (-4679.017) [-4669.815] * [-4658.253] (-4673.578) (-4673.864) (-4672.552) -- 0:11:56
324000 -- (-4671.885) (-4671.951) [-4663.026] (-4662.285) * [-4664.167] (-4678.010) (-4666.380) (-4669.830) -- 0:11:57
325000 -- (-4689.652) (-4674.659) (-4668.702) [-4673.739] * [-4669.143] (-4674.057) (-4667.273) (-4678.725) -- 0:11:56
Average standard deviation of split frequencies: 0.011930
326000 -- (-4668.691) (-4682.487) [-4670.209] (-4661.735) * (-4671.145) [-4670.117] (-4674.271) (-4669.216) -- 0:11:55
327000 -- [-4671.844] (-4687.598) (-4680.919) (-4667.477) * (-4664.758) (-4682.129) [-4676.526] (-4674.287) -- 0:11:54
328000 -- (-4673.444) [-4663.786] (-4677.124) (-4669.546) * [-4670.863] (-4677.161) (-4675.074) (-4668.899) -- 0:11:52
329000 -- [-4677.820] (-4671.721) (-4670.769) (-4678.362) * (-4681.088) [-4671.271] (-4686.516) (-4665.709) -- 0:11:51
330000 -- (-4675.759) [-4666.399] (-4663.789) (-4679.735) * (-4660.606) (-4690.556) (-4677.947) [-4661.120] -- 0:11:50
Average standard deviation of split frequencies: 0.011833
331000 -- (-4677.950) (-4673.147) (-4671.218) [-4679.767] * (-4668.700) (-4677.455) [-4672.046] (-4680.990) -- 0:11:49
332000 -- (-4673.905) (-4670.159) [-4672.713] (-4674.113) * (-4686.189) [-4665.584] (-4673.754) (-4666.320) -- 0:11:48
333000 -- [-4665.767] (-4684.473) (-4683.303) (-4670.884) * [-4671.674] (-4672.455) (-4670.226) (-4676.919) -- 0:11:47
334000 -- (-4675.857) [-4671.103] (-4671.006) (-4678.482) * (-4676.893) (-4666.580) (-4676.575) [-4667.010] -- 0:11:45
335000 -- (-4670.578) (-4670.521) [-4667.575] (-4674.705) * [-4659.197] (-4668.284) (-4685.105) (-4674.577) -- 0:11:44
Average standard deviation of split frequencies: 0.011294
336000 -- [-4668.028] (-4668.859) (-4675.282) (-4663.551) * [-4664.202] (-4675.756) (-4673.914) (-4687.670) -- 0:11:43
337000 -- (-4667.465) (-4669.762) (-4681.903) [-4675.056] * (-4683.325) [-4668.974] (-4668.697) (-4676.632) -- 0:11:42
338000 -- (-4666.633) (-4662.821) [-4667.474] (-4674.027) * [-4666.719] (-4663.640) (-4669.536) (-4674.648) -- 0:11:41
339000 -- (-4673.255) (-4670.639) [-4668.424] (-4666.190) * [-4668.250] (-4684.622) (-4669.590) (-4673.284) -- 0:11:39
340000 -- (-4681.152) [-4668.250] (-4678.044) (-4668.404) * (-4681.700) (-4674.767) (-4674.724) [-4666.134] -- 0:11:38
Average standard deviation of split frequencies: 0.011001
341000 -- (-4671.714) (-4680.241) [-4668.877] (-4676.001) * (-4669.043) (-4673.282) (-4677.726) [-4679.044] -- 0:11:39
342000 -- (-4668.265) (-4665.970) (-4678.512) [-4674.435] * [-4670.102] (-4677.356) (-4681.048) (-4683.938) -- 0:11:38
343000 -- [-4670.245] (-4666.793) (-4673.828) (-4676.434) * (-4675.963) [-4660.446] (-4668.807) (-4679.262) -- 0:11:37
344000 -- [-4667.507] (-4676.699) (-4677.172) (-4683.254) * (-4677.655) [-4667.819] (-4677.452) (-4671.186) -- 0:11:36
345000 -- (-4663.860) (-4676.817) [-4664.520] (-4680.848) * (-4680.093) [-4671.795] (-4676.429) (-4679.163) -- 0:11:34
Average standard deviation of split frequencies: 0.010968
346000 -- (-4663.381) [-4669.361] (-4663.245) (-4674.824) * (-4685.422) (-4666.461) (-4668.450) [-4675.283] -- 0:11:33
347000 -- (-4673.461) (-4669.606) [-4663.487] (-4684.950) * (-4675.971) [-4667.523] (-4674.146) (-4670.923) -- 0:11:32
348000 -- (-4672.236) (-4667.004) (-4669.329) [-4674.091] * (-4673.281) [-4674.232] (-4672.780) (-4665.553) -- 0:11:31
349000 -- (-4667.547) (-4662.464) (-4675.925) [-4666.236] * (-4664.569) (-4661.759) [-4666.279] (-4665.676) -- 0:11:30
350000 -- [-4671.917] (-4670.348) (-4673.676) (-4672.673) * [-4673.842] (-4671.814) (-4664.030) (-4678.464) -- 0:11:29
Average standard deviation of split frequencies: 0.011427
351000 -- (-4678.622) (-4675.027) (-4669.672) [-4667.177] * (-4671.013) (-4673.768) (-4669.365) [-4675.029] -- 0:11:27
352000 -- (-4669.020) (-4664.823) (-4673.197) [-4667.520] * (-4674.116) (-4667.350) (-4670.697) [-4672.616] -- 0:11:26
353000 -- (-4677.302) (-4668.914) [-4667.864] (-4670.164) * (-4668.365) [-4663.732] (-4672.665) (-4689.402) -- 0:11:25
354000 -- [-4676.198] (-4664.958) (-4675.255) (-4664.831) * (-4671.179) (-4671.419) (-4676.163) [-4680.260] -- 0:11:24
355000 -- (-4673.425) (-4674.100) (-4677.733) [-4671.047] * (-4673.597) (-4682.032) (-4671.809) [-4675.856] -- 0:11:23
Average standard deviation of split frequencies: 0.011520
356000 -- (-4675.244) (-4672.512) [-4666.007] (-4673.758) * (-4679.205) (-4671.038) (-4671.666) [-4669.436] -- 0:11:21
357000 -- (-4661.362) (-4666.964) (-4677.123) [-4684.146] * (-4674.930) [-4664.707] (-4677.099) (-4678.701) -- 0:11:22
358000 -- (-4680.961) (-4673.955) (-4679.446) [-4671.396] * [-4658.664] (-4667.513) (-4676.534) (-4680.347) -- 0:11:21
359000 -- (-4687.459) (-4672.227) [-4678.096] (-4676.779) * (-4674.550) [-4671.876] (-4666.369) (-4688.642) -- 0:11:20
360000 -- [-4669.208] (-4672.957) (-4679.907) (-4671.750) * [-4665.799] (-4674.751) (-4675.804) (-4676.820) -- 0:11:19
Average standard deviation of split frequencies: 0.011044
361000 -- (-4672.002) [-4664.572] (-4682.808) (-4663.128) * (-4682.392) [-4670.602] (-4669.424) (-4675.464) -- 0:11:17
362000 -- [-4658.496] (-4682.172) (-4667.092) (-4676.452) * (-4661.148) (-4672.193) (-4671.901) [-4671.444] -- 0:11:16
363000 -- (-4672.406) (-4671.893) (-4672.499) [-4672.072] * [-4667.711] (-4686.410) (-4679.187) (-4662.926) -- 0:11:15
364000 -- (-4683.098) (-4675.115) (-4670.166) [-4667.681] * [-4674.873] (-4678.714) (-4676.082) (-4672.616) -- 0:11:14
365000 -- (-4670.979) [-4675.328] (-4671.727) (-4680.680) * (-4673.330) [-4665.639] (-4670.649) (-4679.518) -- 0:11:13
Average standard deviation of split frequencies: 0.011012
366000 -- (-4668.121) (-4663.125) [-4659.513] (-4671.131) * (-4664.961) (-4683.013) [-4668.899] (-4671.509) -- 0:11:12
367000 -- (-4677.494) (-4673.439) [-4671.268] (-4669.936) * (-4668.229) (-4663.611) (-4671.655) [-4667.478] -- 0:11:10
368000 -- (-4668.399) [-4671.611] (-4671.919) (-4666.287) * (-4662.608) (-4676.886) [-4675.314] (-4670.885) -- 0:11:09
369000 -- (-4669.541) [-4668.117] (-4673.968) (-4665.125) * (-4668.744) [-4668.950] (-4669.115) (-4669.930) -- 0:11:08
370000 -- [-4668.943] (-4666.842) (-4671.871) (-4676.066) * (-4685.051) (-4674.168) (-4669.778) [-4673.561] -- 0:11:07
Average standard deviation of split frequencies: 0.011446
371000 -- (-4672.106) (-4678.961) [-4662.637] (-4684.251) * (-4677.421) (-4668.271) [-4667.149] (-4674.355) -- 0:11:06
372000 -- (-4667.463) (-4675.683) (-4670.334) [-4664.088] * (-4664.297) (-4672.686) [-4670.170] (-4675.167) -- 0:11:05
373000 -- (-4667.278) [-4669.895] (-4670.767) (-4669.618) * [-4665.709] (-4669.406) (-4680.072) (-4673.360) -- 0:11:03
374000 -- [-4664.383] (-4686.197) (-4670.765) (-4676.239) * (-4670.704) (-4670.557) [-4670.786] (-4666.226) -- 0:11:02
375000 -- [-4657.898] (-4670.665) (-4662.207) (-4679.092) * (-4668.740) (-4670.162) [-4664.534] (-4677.770) -- 0:11:03
Average standard deviation of split frequencies: 0.011221
376000 -- (-4662.100) [-4681.795] (-4677.918) (-4674.772) * (-4668.906) [-4670.242] (-4671.599) (-4691.626) -- 0:11:02
377000 -- (-4667.565) [-4670.364] (-4671.134) (-4681.828) * (-4676.483) [-4669.366] (-4680.750) (-4678.298) -- 0:11:01
378000 -- (-4675.055) (-4686.863) (-4669.973) [-4668.499] * (-4673.273) (-4679.513) [-4677.275] (-4678.532) -- 0:10:59
379000 -- [-4677.363] (-4663.284) (-4682.684) (-4674.838) * (-4686.423) (-4671.353) [-4665.537] (-4671.043) -- 0:10:58
380000 -- (-4666.523) (-4677.637) [-4669.934] (-4668.346) * (-4676.693) (-4671.936) [-4668.459] (-4671.288) -- 0:10:57
Average standard deviation of split frequencies: 0.010836
381000 -- (-4671.784) (-4680.888) [-4665.715] (-4675.118) * (-4670.267) [-4664.228] (-4668.037) (-4668.499) -- 0:10:56
382000 -- [-4665.280] (-4668.355) (-4684.943) (-4678.650) * [-4663.027] (-4678.092) (-4686.520) (-4674.894) -- 0:10:55
383000 -- (-4678.663) (-4673.189) (-4665.553) [-4670.449] * [-4680.682] (-4680.944) (-4673.339) (-4665.436) -- 0:10:54
384000 -- [-4670.043] (-4670.574) (-4668.919) (-4664.836) * (-4669.684) [-4667.880] (-4674.713) (-4669.335) -- 0:10:52
385000 -- (-4663.497) (-4665.690) (-4693.920) [-4668.103] * (-4662.182) (-4668.040) (-4689.528) [-4665.908] -- 0:10:51
Average standard deviation of split frequencies: 0.011052
386000 -- [-4664.321] (-4667.293) (-4674.055) (-4670.366) * (-4682.685) (-4666.834) [-4668.722] (-4679.297) -- 0:10:50
387000 -- (-4667.434) (-4680.562) [-4662.241] (-4673.255) * (-4668.053) [-4666.115] (-4667.168) (-4672.768) -- 0:10:49
388000 -- (-4669.356) (-4668.160) (-4661.725) [-4666.939] * [-4669.046] (-4670.680) (-4666.781) (-4673.894) -- 0:10:48
389000 -- (-4670.414) (-4673.968) (-4664.493) [-4669.859] * (-4678.858) (-4679.188) (-4666.680) [-4673.546] -- 0:10:47
390000 -- (-4675.546) (-4669.995) [-4671.957] (-4674.059) * [-4669.192] (-4661.440) (-4680.859) (-4686.069) -- 0:10:45
Average standard deviation of split frequencies: 0.010860
391000 -- (-4674.924) (-4665.595) [-4659.610] (-4673.508) * [-4667.013] (-4668.864) (-4674.967) (-4667.181) -- 0:10:44
392000 -- (-4670.814) [-4669.276] (-4665.071) (-4675.887) * (-4667.550) (-4667.347) (-4670.656) [-4660.812] -- 0:10:45
393000 -- (-4671.007) [-4676.960] (-4676.794) (-4677.593) * (-4664.507) (-4680.844) (-4679.583) [-4669.014] -- 0:10:44
394000 -- [-4666.843] (-4666.518) (-4673.498) (-4671.919) * (-4678.623) (-4670.429) [-4673.548] (-4672.700) -- 0:10:42
395000 -- (-4678.103) (-4670.054) [-4674.142] (-4673.240) * (-4685.042) (-4670.358) [-4662.496] (-4673.332) -- 0:10:41
Average standard deviation of split frequencies: 0.010178
396000 -- [-4666.641] (-4668.329) (-4670.049) (-4671.117) * (-4679.719) (-4672.146) (-4669.380) [-4677.117] -- 0:10:40
397000 -- [-4666.093] (-4666.285) (-4675.913) (-4672.600) * (-4678.285) (-4673.482) (-4664.693) [-4670.066] -- 0:10:39
398000 -- (-4671.130) (-4674.942) (-4667.272) [-4670.421] * (-4681.943) (-4677.704) (-4669.728) [-4668.562] -- 0:10:38
399000 -- (-4669.981) [-4669.553] (-4671.381) (-4676.698) * (-4670.568) [-4670.683] (-4667.905) (-4666.238) -- 0:10:37
400000 -- (-4672.571) (-4675.496) [-4666.717] (-4670.320) * [-4666.459] (-4670.730) (-4669.941) (-4671.367) -- 0:10:36
Average standard deviation of split frequencies: 0.009942
401000 -- [-4657.191] (-4672.148) (-4668.717) (-4668.909) * (-4668.865) (-4669.572) [-4672.173] (-4666.157) -- 0:10:34
402000 -- (-4668.521) (-4673.847) [-4669.189] (-4675.573) * (-4680.701) (-4667.997) [-4669.292] (-4679.097) -- 0:10:33
403000 -- (-4666.577) [-4673.378] (-4666.750) (-4667.969) * [-4672.725] (-4671.397) (-4669.657) (-4680.130) -- 0:10:32
404000 -- (-4680.724) (-4674.355) [-4663.964] (-4675.587) * (-4668.282) (-4683.011) (-4668.319) [-4667.941] -- 0:10:31
405000 -- [-4679.441] (-4668.836) (-4676.994) (-4674.249) * (-4675.202) (-4670.558) (-4674.452) [-4677.153] -- 0:10:30
Average standard deviation of split frequencies: 0.008940
406000 -- (-4671.360) [-4665.014] (-4667.905) (-4689.411) * [-4672.789] (-4666.493) (-4681.301) (-4669.353) -- 0:10:30
407000 -- (-4679.063) (-4678.116) [-4662.538] (-4673.784) * (-4667.751) (-4668.601) [-4664.241] (-4678.826) -- 0:10:29
408000 -- (-4683.612) (-4666.744) (-4672.620) [-4665.199] * (-4674.531) [-4668.572] (-4672.418) (-4670.769) -- 0:10:28
409000 -- (-4668.464) (-4666.876) (-4677.592) [-4667.096] * (-4669.629) (-4701.914) (-4673.878) [-4675.185] -- 0:10:27
410000 -- (-4672.359) (-4665.514) (-4681.303) [-4669.006] * (-4667.908) (-4676.817) [-4663.728] (-4671.797) -- 0:10:25
Average standard deviation of split frequencies: 0.008609
411000 -- [-4663.591] (-4669.794) (-4674.917) (-4670.167) * (-4672.778) (-4681.304) [-4666.633] (-4673.939) -- 0:10:24
412000 -- (-4677.624) (-4670.670) [-4672.485] (-4684.894) * [-4678.472] (-4673.787) (-4672.311) (-4681.635) -- 0:10:23
413000 -- (-4667.908) [-4666.750] (-4673.849) (-4678.763) * (-4671.643) [-4671.460] (-4665.744) (-4663.519) -- 0:10:22
414000 -- (-4671.507) (-4668.618) (-4675.861) [-4674.093] * (-4679.054) (-4674.165) (-4673.058) [-4672.406] -- 0:10:21
415000 -- (-4666.830) [-4669.239] (-4674.677) (-4667.538) * [-4666.177] (-4674.002) (-4671.005) (-4670.505) -- 0:10:20
Average standard deviation of split frequencies: 0.008612
416000 -- (-4683.229) [-4672.266] (-4672.376) (-4665.918) * (-4661.703) (-4662.803) (-4679.418) [-4670.266] -- 0:10:19
417000 -- (-4669.404) (-4674.892) (-4673.242) [-4664.041] * [-4668.732] (-4663.116) (-4680.264) (-4667.928) -- 0:10:17
418000 -- (-4664.935) [-4664.964] (-4670.582) (-4674.585) * (-4668.476) (-4670.620) [-4671.281] (-4670.133) -- 0:10:16
419000 -- (-4676.471) [-4668.114] (-4667.289) (-4673.355) * (-4672.575) (-4678.086) (-4664.624) [-4665.682] -- 0:10:15
420000 -- (-4669.404) (-4670.833) (-4677.531) [-4665.265] * (-4671.171) (-4681.870) [-4661.681] (-4680.109) -- 0:10:14
Average standard deviation of split frequencies: 0.009077
421000 -- (-4676.651) (-4672.944) (-4678.682) [-4663.518] * [-4671.260] (-4665.649) (-4663.822) (-4666.878) -- 0:10:13
422000 -- [-4664.123] (-4677.510) (-4668.759) (-4659.500) * (-4672.060) (-4674.934) (-4665.282) [-4678.405] -- 0:10:12
423000 -- (-4674.871) [-4669.913] (-4682.096) (-4668.418) * (-4673.334) [-4684.768] (-4677.135) (-4669.145) -- 0:10:11
424000 -- [-4676.909] (-4669.572) (-4674.221) (-4661.659) * [-4661.813] (-4670.477) (-4674.252) (-4666.852) -- 0:10:11
425000 -- (-4672.654) [-4665.574] (-4672.827) (-4664.717) * [-4662.732] (-4675.037) (-4667.128) (-4675.364) -- 0:10:10
Average standard deviation of split frequencies: 0.009295
426000 -- (-4679.596) (-4676.080) [-4664.074] (-4663.276) * (-4669.773) (-4682.875) [-4670.360] (-4665.722) -- 0:10:09
427000 -- (-4682.927) [-4675.093] (-4673.390) (-4676.847) * (-4661.720) (-4672.146) [-4672.608] (-4673.039) -- 0:10:07
428000 -- (-4679.117) [-4670.497] (-4683.376) (-4667.868) * (-4668.935) (-4662.253) (-4676.023) [-4677.665] -- 0:10:06
429000 -- (-4677.793) (-4669.879) (-4677.698) [-4679.646] * (-4664.702) [-4668.761] (-4678.288) (-4668.691) -- 0:10:05
430000 -- (-4664.728) [-4668.999] (-4668.178) (-4677.268) * (-4675.067) (-4674.570) (-4672.925) [-4662.039] -- 0:10:04
Average standard deviation of split frequencies: 0.008757
431000 -- (-4670.170) (-4674.416) [-4668.688] (-4673.139) * (-4672.645) (-4672.197) [-4665.041] (-4677.231) -- 0:10:03
432000 -- (-4677.803) (-4667.830) (-4674.560) [-4668.503] * [-4675.653] (-4674.937) (-4674.790) (-4684.003) -- 0:10:02
433000 -- (-4669.510) [-4668.574] (-4672.700) (-4677.159) * (-4672.990) [-4676.060] (-4673.364) (-4679.128) -- 0:10:01
434000 -- (-4670.815) (-4678.814) [-4672.325] (-4672.863) * (-4668.059) (-4673.402) [-4669.157] (-4670.425) -- 0:09:59
435000 -- (-4663.492) [-4674.640] (-4679.819) (-4668.603) * [-4662.959] (-4675.391) (-4671.235) (-4681.307) -- 0:09:58
Average standard deviation of split frequencies: 0.008650
436000 -- (-4672.776) [-4679.897] (-4665.326) (-4663.925) * (-4673.301) (-4678.463) [-4663.824] (-4677.333) -- 0:09:57
437000 -- [-4672.818] (-4686.128) (-4667.977) (-4675.663) * [-4680.531] (-4672.119) (-4668.902) (-4681.810) -- 0:09:56
438000 -- (-4668.327) (-4673.252) [-4673.788] (-4662.478) * (-4669.252) [-4669.275] (-4671.664) (-4670.187) -- 0:09:55
439000 -- [-4667.927] (-4673.216) (-4672.640) (-4675.829) * (-4675.979) [-4667.229] (-4669.615) (-4665.856) -- 0:09:54
440000 -- (-4675.759) [-4664.422] (-4671.490) (-4675.092) * (-4676.444) (-4665.746) [-4673.514] (-4674.312) -- 0:09:53
Average standard deviation of split frequencies: 0.008718
441000 -- [-4670.168] (-4671.614) (-4672.910) (-4673.867) * [-4666.799] (-4674.062) (-4666.629) (-4669.524) -- 0:09:51
442000 -- (-4674.958) (-4673.088) (-4666.517) [-4668.133] * (-4674.440) (-4672.660) [-4678.581] (-4670.470) -- 0:09:50
443000 -- [-4671.663] (-4683.836) (-4677.654) (-4668.571) * (-4667.892) (-4676.101) (-4678.577) [-4666.578] -- 0:09:49
444000 -- (-4678.031) (-4668.930) [-4667.800] (-4665.195) * (-4672.101) [-4667.008] (-4674.926) (-4667.354) -- 0:09:49
445000 -- [-4663.020] (-4679.274) (-4670.270) (-4672.088) * (-4666.435) [-4665.283] (-4682.114) (-4668.761) -- 0:09:48
Average standard deviation of split frequencies: 0.009143
446000 -- [-4678.930] (-4677.288) (-4667.628) (-4678.825) * [-4664.766] (-4674.384) (-4679.795) (-4669.999) -- 0:09:47
447000 -- (-4682.163) (-4680.421) [-4671.505] (-4677.548) * (-4675.245) (-4676.432) (-4667.881) [-4664.554] -- 0:09:46
448000 -- (-4667.603) (-4671.663) (-4684.390) [-4674.537] * [-4664.864] (-4666.812) (-4668.968) (-4678.347) -- 0:09:45
449000 -- [-4672.353] (-4673.483) (-4671.078) (-4669.001) * (-4665.547) (-4675.175) (-4666.866) [-4667.773] -- 0:09:44
450000 -- (-4675.176) (-4667.851) [-4675.112] (-4674.643) * (-4674.319) [-4668.225] (-4672.417) (-4667.874) -- 0:09:43
Average standard deviation of split frequencies: 0.009676
451000 -- (-4666.835) [-4669.002] (-4669.232) (-4664.964) * (-4676.723) [-4669.809] (-4670.238) (-4679.896) -- 0:09:41
452000 -- (-4672.658) (-4674.259) [-4667.550] (-4677.673) * (-4685.690) [-4667.125] (-4675.108) (-4673.680) -- 0:09:40
453000 -- (-4683.486) [-4679.163] (-4675.689) (-4674.093) * (-4676.592) [-4668.949] (-4668.696) (-4674.997) -- 0:09:39
454000 -- (-4668.636) (-4672.256) (-4664.031) [-4667.372] * [-4671.862] (-4671.074) (-4672.970) (-4674.006) -- 0:09:38
455000 -- (-4666.177) (-4685.412) (-4681.295) [-4672.254] * (-4670.705) (-4679.217) [-4671.257] (-4664.142) -- 0:09:37
Average standard deviation of split frequencies: 0.010183
456000 -- (-4670.724) (-4664.588) (-4670.485) [-4674.301] * (-4668.435) [-4670.829] (-4671.456) (-4665.554) -- 0:09:36
457000 -- (-4668.719) (-4665.987) (-4675.332) [-4672.475] * (-4667.901) [-4669.825] (-4673.039) (-4670.399) -- 0:09:35
458000 -- (-4670.237) (-4668.701) (-4671.059) [-4676.704] * (-4666.846) [-4675.716] (-4679.494) (-4677.459) -- 0:09:33
459000 -- [-4674.921] (-4672.207) (-4673.678) (-4680.724) * (-4684.901) (-4682.414) (-4673.039) [-4660.600] -- 0:09:32
460000 -- (-4666.595) (-4671.853) [-4671.131] (-4676.503) * [-4658.749] (-4675.420) (-4669.768) (-4668.359) -- 0:09:32
Average standard deviation of split frequencies: 0.010080
461000 -- (-4677.838) [-4667.885] (-4666.867) (-4674.086) * [-4671.465] (-4672.320) (-4667.163) (-4681.837) -- 0:09:31
462000 -- (-4676.784) [-4670.676] (-4677.976) (-4661.725) * (-4672.506) (-4667.807) [-4661.270] (-4664.759) -- 0:09:30
463000 -- (-4668.036) (-4670.793) [-4670.777] (-4667.320) * (-4670.227) (-4678.890) (-4670.490) [-4662.466] -- 0:09:29
464000 -- (-4672.606) (-4674.094) (-4677.735) [-4662.334] * (-4684.215) (-4668.713) (-4670.958) [-4665.144] -- 0:09:28
465000 -- [-4667.041] (-4668.507) (-4668.982) (-4671.267) * (-4671.001) (-4669.742) (-4669.078) [-4661.381] -- 0:09:27
Average standard deviation of split frequencies: 0.010571
466000 -- (-4677.530) [-4674.792] (-4664.760) (-4671.856) * [-4664.661] (-4668.703) (-4659.868) (-4680.011) -- 0:09:26
467000 -- (-4670.959) (-4667.412) (-4676.446) [-4669.022] * [-4660.487] (-4673.603) (-4668.809) (-4682.371) -- 0:09:24
468000 -- (-4664.952) [-4663.267] (-4673.510) (-4679.583) * (-4676.558) [-4671.474] (-4668.763) (-4670.619) -- 0:09:23
469000 -- [-4666.907] (-4677.528) (-4679.727) (-4672.088) * (-4666.561) (-4675.729) [-4657.496] (-4675.791) -- 0:09:22
470000 -- (-4662.175) [-4676.435] (-4672.211) (-4672.873) * [-4665.104] (-4676.756) (-4664.935) (-4675.372) -- 0:09:21
Average standard deviation of split frequencies: 0.010617
471000 -- [-4663.716] (-4666.893) (-4672.691) (-4673.531) * (-4675.520) (-4669.474) (-4665.088) [-4669.896] -- 0:09:20
472000 -- (-4672.582) (-4673.122) [-4670.087] (-4679.729) * (-4676.809) (-4664.139) (-4669.162) [-4673.915] -- 0:09:19
473000 -- (-4676.214) (-4664.720) (-4674.964) [-4672.931] * (-4668.854) [-4665.849] (-4672.289) (-4664.744) -- 0:09:18
474000 -- (-4678.805) (-4684.671) (-4668.421) [-4672.753] * (-4680.326) [-4678.308] (-4671.464) (-4671.118) -- 0:09:18
475000 -- (-4674.283) (-4671.985) [-4672.268] (-4671.762) * (-4665.488) (-4673.009) [-4671.371] (-4674.958) -- 0:09:17
Average standard deviation of split frequencies: 0.010795
476000 -- [-4662.554] (-4692.639) (-4675.763) (-4672.181) * (-4670.847) [-4676.842] (-4683.529) (-4678.867) -- 0:09:15
477000 -- (-4663.375) (-4676.751) (-4670.547) [-4661.601] * (-4673.933) (-4676.014) [-4668.893] (-4676.256) -- 0:09:14
478000 -- (-4665.569) (-4670.963) (-4683.290) [-4665.359] * (-4665.272) [-4666.764] (-4672.096) (-4669.774) -- 0:09:13
479000 -- (-4684.516) [-4663.735] (-4676.990) (-4680.555) * (-4660.567) [-4675.382] (-4674.819) (-4678.872) -- 0:09:12
480000 -- [-4681.835] (-4689.083) (-4669.320) (-4681.511) * (-4670.710) (-4673.389) [-4664.193] (-4665.173) -- 0:09:11
Average standard deviation of split frequencies: 0.010641
481000 -- [-4670.236] (-4678.733) (-4680.278) (-4680.403) * [-4668.874] (-4673.223) (-4685.563) (-4665.274) -- 0:09:10
482000 -- (-4669.816) (-4681.644) [-4669.764] (-4680.576) * (-4671.243) (-4682.279) [-4666.883] (-4669.878) -- 0:09:09
483000 -- [-4677.726] (-4665.424) (-4665.483) (-4676.533) * (-4677.145) [-4667.276] (-4672.207) (-4664.911) -- 0:09:08
484000 -- (-4690.953) [-4668.391] (-4674.175) (-4674.432) * (-4679.584) (-4668.766) [-4664.658] (-4675.053) -- 0:09:06
485000 -- (-4665.858) [-4677.158] (-4661.249) (-4674.755) * (-4670.065) (-4667.313) (-4674.086) [-4665.581] -- 0:09:05
Average standard deviation of split frequencies: 0.010524
486000 -- [-4666.998] (-4679.377) (-4673.741) (-4673.322) * (-4685.138) (-4668.832) (-4663.275) [-4664.929] -- 0:09:04
487000 -- (-4672.089) (-4674.757) (-4670.370) [-4666.693] * [-4674.128] (-4664.657) (-4673.936) (-4676.098) -- 0:09:03
488000 -- (-4677.272) (-4672.988) [-4667.149] (-4678.352) * [-4678.028] (-4666.697) (-4671.832) (-4665.917) -- 0:09:03
489000 -- [-4670.178] (-4673.837) (-4671.708) (-4668.164) * (-4674.837) (-4675.734) [-4671.097] (-4681.711) -- 0:09:02
490000 -- [-4665.535] (-4676.872) (-4672.485) (-4664.933) * [-4673.876] (-4665.579) (-4666.983) (-4673.324) -- 0:09:01
Average standard deviation of split frequencies: 0.010136
491000 -- (-4674.030) (-4670.441) [-4665.684] (-4669.428) * (-4676.197) [-4670.598] (-4669.436) (-4671.279) -- 0:09:00
492000 -- (-4675.741) (-4673.821) (-4685.065) [-4669.849] * (-4681.723) (-4668.046) (-4676.036) [-4666.011] -- 0:08:58
493000 -- (-4668.766) (-4670.736) [-4666.069] (-4665.508) * [-4679.190] (-4671.175) (-4672.487) (-4676.636) -- 0:08:57
494000 -- (-4676.409) (-4664.756) [-4663.838] (-4672.775) * (-4669.468) [-4667.903] (-4675.635) (-4666.474) -- 0:08:56
495000 -- (-4662.935) [-4666.510] (-4669.274) (-4670.257) * (-4674.622) [-4666.671] (-4682.377) (-4669.694) -- 0:08:55
Average standard deviation of split frequencies: 0.009884
496000 -- (-4680.544) [-4665.829] (-4670.413) (-4668.898) * (-4676.101) (-4675.237) [-4666.810] (-4666.567) -- 0:08:54
497000 -- [-4666.903] (-4677.115) (-4660.408) (-4674.207) * (-4664.350) (-4682.248) [-4669.190] (-4672.203) -- 0:08:53
498000 -- [-4671.867] (-4673.819) (-4669.454) (-4666.504) * [-4672.131] (-4672.924) (-4671.891) (-4669.785) -- 0:08:52
499000 -- (-4676.682) (-4691.518) [-4667.502] (-4664.175) * (-4676.167) (-4663.326) (-4669.171) [-4671.529] -- 0:08:51
500000 -- (-4666.204) [-4674.969] (-4664.287) (-4671.633) * [-4670.388] (-4683.680) (-4674.014) (-4668.721) -- 0:08:50
Average standard deviation of split frequencies: 0.010404
501000 -- (-4676.073) (-4670.316) [-4674.865] (-4679.760) * (-4666.681) (-4675.036) [-4672.323] (-4677.902) -- 0:08:48
502000 -- (-4670.271) (-4686.111) [-4670.976] (-4671.942) * [-4666.712] (-4673.937) (-4668.393) (-4671.609) -- 0:08:47
503000 -- (-4672.745) [-4666.614] (-4690.830) (-4668.373) * [-4667.934] (-4663.098) (-4673.959) (-4687.717) -- 0:08:46
504000 -- (-4665.802) (-4671.242) (-4684.919) [-4660.944] * (-4663.386) [-4659.496] (-4667.547) (-4686.345) -- 0:08:45
505000 -- (-4674.124) (-4662.992) [-4687.001] (-4687.134) * (-4674.941) [-4667.608] (-4669.726) (-4671.636) -- 0:08:44
Average standard deviation of split frequencies: 0.010108
506000 -- [-4668.574] (-4668.201) (-4693.456) (-4679.951) * (-4669.794) (-4675.213) (-4672.523) [-4677.049] -- 0:08:44
507000 -- (-4676.988) (-4671.410) [-4673.890] (-4670.234) * [-4658.382] (-4670.665) (-4682.422) (-4674.958) -- 0:08:43
508000 -- [-4670.835] (-4670.241) (-4673.710) (-4675.720) * [-4661.931] (-4679.963) (-4674.914) (-4680.581) -- 0:08:42
509000 -- (-4669.055) [-4661.740] (-4664.461) (-4664.776) * (-4673.936) [-4669.885] (-4675.959) (-4672.867) -- 0:08:40
510000 -- (-4671.924) [-4665.100] (-4666.907) (-4677.636) * (-4674.358) (-4681.509) (-4666.414) [-4666.973] -- 0:08:39
Average standard deviation of split frequencies: 0.010893
511000 -- (-4683.049) [-4660.095] (-4675.288) (-4666.203) * (-4678.995) (-4672.810) (-4677.652) [-4673.831] -- 0:08:38
512000 -- (-4667.997) (-4676.429) (-4666.305) [-4665.152] * [-4673.575] (-4684.785) (-4675.164) (-4669.584) -- 0:08:37
513000 -- [-4674.723] (-4673.055) (-4670.871) (-4672.427) * (-4669.218) [-4661.651] (-4679.640) (-4665.847) -- 0:08:36
514000 -- [-4662.562] (-4669.382) (-4668.419) (-4670.320) * (-4669.543) [-4667.395] (-4671.170) (-4680.602) -- 0:08:35
515000 -- (-4671.404) (-4667.156) (-4678.779) [-4674.178] * (-4670.137) (-4671.753) [-4668.906] (-4688.333) -- 0:08:34
Average standard deviation of split frequencies: 0.010963
516000 -- (-4673.481) (-4668.076) (-4674.422) [-4671.485] * (-4668.241) (-4670.736) (-4664.391) [-4664.134] -- 0:08:33
517000 -- (-4665.278) (-4681.221) [-4670.117] (-4678.483) * (-4677.629) [-4670.921] (-4664.146) (-4671.217) -- 0:08:31
518000 -- (-4669.203) (-4686.334) (-4680.239) [-4676.310] * (-4671.340) (-4675.439) (-4679.609) [-4666.395] -- 0:08:30
519000 -- [-4671.973] (-4675.626) (-4662.186) (-4673.245) * [-4665.114] (-4674.257) (-4670.134) (-4689.380) -- 0:08:29
520000 -- [-4669.322] (-4679.829) (-4672.008) (-4686.002) * (-4665.769) (-4676.091) (-4672.958) [-4668.076] -- 0:08:28
Average standard deviation of split frequencies: 0.010321
521000 -- (-4679.276) (-4663.256) [-4671.726] (-4666.483) * [-4671.950] (-4668.226) (-4671.242) (-4671.845) -- 0:08:27
522000 -- [-4670.722] (-4678.031) (-4690.314) (-4671.489) * (-4672.818) (-4664.560) (-4671.424) [-4669.148] -- 0:08:27
523000 -- (-4681.189) (-4672.356) [-4671.296] (-4671.088) * (-4669.242) (-4667.678) [-4668.291] (-4674.111) -- 0:08:26
524000 -- (-4673.924) (-4672.191) [-4674.764] (-4672.789) * [-4664.135] (-4674.635) (-4679.028) (-4664.529) -- 0:08:25
525000 -- (-4665.539) (-4673.201) (-4665.382) [-4666.720] * (-4664.291) (-4672.501) (-4669.229) [-4673.520] -- 0:08:23
Average standard deviation of split frequencies: 0.009903
526000 -- (-4666.796) (-4673.175) (-4674.631) [-4660.289] * (-4672.510) (-4684.304) (-4673.162) [-4663.518] -- 0:08:22
527000 -- (-4663.533) (-4667.189) (-4669.614) [-4671.620] * (-4671.007) (-4675.470) (-4664.896) [-4664.542] -- 0:08:21
528000 -- [-4662.211] (-4676.011) (-4666.508) (-4676.741) * (-4680.668) [-4658.684] (-4676.716) (-4680.058) -- 0:08:20
529000 -- (-4668.312) (-4668.936) (-4681.610) [-4663.783] * (-4674.261) [-4669.308] (-4667.681) (-4673.287) -- 0:08:19
530000 -- (-4670.026) (-4673.533) (-4677.510) [-4668.678] * [-4663.429] (-4662.521) (-4681.822) (-4674.165) -- 0:08:18
Average standard deviation of split frequencies: 0.009994
531000 -- (-4689.695) (-4678.078) [-4677.049] (-4684.069) * (-4664.997) (-4666.897) (-4673.158) [-4681.080] -- 0:08:17
532000 -- (-4673.294) (-4668.182) [-4672.636] (-4668.700) * (-4671.664) (-4664.841) (-4678.579) [-4669.486] -- 0:08:16
533000 -- (-4676.369) (-4671.214) (-4668.608) [-4668.381] * [-4662.596] (-4669.954) (-4672.814) (-4671.535) -- 0:08:15
534000 -- (-4679.569) [-4664.379] (-4674.782) (-4675.562) * (-4675.703) [-4674.088] (-4681.672) (-4678.548) -- 0:08:13
535000 -- [-4668.517] (-4664.850) (-4683.042) (-4677.059) * (-4668.983) [-4679.936] (-4686.779) (-4674.135) -- 0:08:12
Average standard deviation of split frequencies: 0.010334
536000 -- (-4665.993) [-4676.139] (-4671.310) (-4679.562) * (-4672.713) [-4670.443] (-4673.950) (-4675.924) -- 0:08:11
537000 -- (-4677.945) [-4674.699] (-4679.222) (-4662.362) * (-4668.374) (-4669.878) (-4674.620) [-4673.125] -- 0:08:11
538000 -- (-4668.908) (-4684.254) (-4675.578) [-4665.566] * (-4672.996) (-4662.390) (-4672.964) [-4665.166] -- 0:08:10
539000 -- (-4678.017) [-4671.008] (-4670.893) (-4666.775) * (-4676.850) (-4680.805) (-4673.827) [-4671.909] -- 0:08:09
540000 -- (-4676.198) [-4669.347] (-4670.833) (-4665.403) * (-4661.247) (-4672.836) [-4665.858] (-4665.596) -- 0:08:08
Average standard deviation of split frequencies: 0.010027
541000 -- [-4666.771] (-4677.346) (-4678.318) (-4672.454) * (-4670.351) [-4668.300] (-4669.701) (-4671.826) -- 0:08:06
542000 -- (-4671.971) (-4675.203) (-4680.609) [-4663.940] * (-4669.792) (-4666.863) (-4667.468) [-4669.787] -- 0:08:05
543000 -- (-4672.414) (-4669.033) (-4674.314) [-4664.683] * [-4668.761] (-4676.533) (-4679.097) (-4668.689) -- 0:08:04
544000 -- (-4666.813) [-4665.656] (-4668.949) (-4670.644) * [-4668.820] (-4668.204) (-4672.442) (-4672.240) -- 0:08:03
545000 -- (-4674.271) (-4663.954) [-4660.793] (-4676.964) * (-4671.503) (-4680.918) (-4674.821) [-4671.380] -- 0:08:02
Average standard deviation of split frequencies: 0.010188
546000 -- (-4669.529) (-4674.514) [-4678.032] (-4693.464) * (-4669.762) (-4675.832) (-4674.129) [-4674.226] -- 0:08:01
547000 -- (-4674.005) (-4680.014) [-4670.811] (-4663.939) * (-4669.937) [-4665.313] (-4678.672) (-4668.559) -- 0:08:00
548000 -- (-4663.564) (-4668.205) (-4676.261) [-4671.544] * (-4668.681) (-4679.042) (-4663.566) [-4671.649] -- 0:07:59
549000 -- [-4667.452] (-4679.119) (-4672.534) (-4668.849) * (-4671.839) (-4672.965) (-4672.508) [-4659.785] -- 0:07:58
550000 -- (-4670.564) (-4668.206) (-4668.684) [-4673.181] * (-4668.125) (-4676.629) (-4677.035) [-4657.584] -- 0:07:57
Average standard deviation of split frequencies: 0.010273
551000 -- (-4676.141) [-4676.101] (-4670.361) (-4661.947) * (-4682.024) [-4665.651] (-4673.874) (-4685.057) -- 0:07:56
552000 -- (-4672.351) (-4679.185) (-4673.036) [-4662.328] * (-4674.550) [-4668.195] (-4668.820) (-4682.460) -- 0:07:55
553000 -- (-4672.676) [-4672.784] (-4670.020) (-4673.440) * (-4666.325) [-4657.825] (-4669.212) (-4672.662) -- 0:07:54
554000 -- (-4678.815) (-4671.297) (-4681.215) [-4665.783] * (-4680.991) (-4663.999) [-4663.200] (-4683.099) -- 0:07:53
555000 -- (-4678.673) (-4676.618) (-4667.771) [-4673.213] * (-4666.183) [-4665.383] (-4664.237) (-4669.155) -- 0:07:52
Average standard deviation of split frequencies: 0.010598
556000 -- [-4660.624] (-4675.296) (-4679.577) (-4673.530) * (-4673.665) [-4665.425] (-4687.295) (-4674.962) -- 0:07:51
557000 -- [-4666.633] (-4668.969) (-4674.999) (-4666.312) * (-4671.394) (-4671.037) (-4679.117) [-4662.105] -- 0:07:50
558000 -- (-4680.678) (-4667.864) [-4666.072] (-4671.906) * (-4672.625) (-4682.038) (-4670.725) [-4660.510] -- 0:07:48
559000 -- (-4667.935) [-4663.310] (-4670.783) (-4670.593) * (-4683.450) (-4683.960) [-4662.928] (-4672.522) -- 0:07:47
560000 -- (-4671.110) [-4666.726] (-4676.464) (-4680.980) * (-4680.970) [-4663.096] (-4678.804) (-4665.665) -- 0:07:46
Average standard deviation of split frequencies: 0.010804
561000 -- [-4675.377] (-4677.436) (-4675.423) (-4681.309) * (-4672.231) [-4668.094] (-4668.354) (-4667.604) -- 0:07:45
562000 -- [-4664.955] (-4680.587) (-4671.641) (-4672.967) * (-4681.140) (-4680.560) [-4667.329] (-4684.394) -- 0:07:44
563000 -- (-4670.322) (-4678.470) [-4673.775] (-4671.649) * [-4674.562] (-4672.146) (-4677.318) (-4667.569) -- 0:07:43
564000 -- (-4678.945) (-4670.384) [-4676.333] (-4667.639) * (-4668.501) (-4666.029) (-4666.003) [-4667.956] -- 0:07:42
565000 -- (-4678.509) (-4674.535) [-4667.531] (-4671.636) * (-4675.729) (-4664.035) (-4676.901) [-4667.174] -- 0:07:41
Average standard deviation of split frequencies: 0.010369
566000 -- (-4672.645) (-4672.459) (-4672.310) [-4672.593] * [-4673.388] (-4668.344) (-4669.746) (-4668.324) -- 0:07:40
567000 -- (-4688.562) (-4668.321) (-4670.642) [-4672.879] * (-4675.455) (-4667.918) [-4669.295] (-4674.628) -- 0:07:39
568000 -- [-4661.188] (-4664.156) (-4677.024) (-4676.282) * [-4670.599] (-4667.038) (-4671.492) (-4684.344) -- 0:07:38
569000 -- (-4674.236) [-4669.880] (-4667.092) (-4666.138) * (-4676.317) (-4675.590) (-4676.461) [-4671.207] -- 0:07:37
570000 -- (-4671.881) [-4676.326] (-4672.027) (-4684.554) * (-4671.173) (-4683.067) [-4665.860] (-4670.642) -- 0:07:36
Average standard deviation of split frequencies: 0.009913
571000 -- (-4670.710) [-4672.482] (-4684.566) (-4671.406) * (-4687.829) (-4668.023) [-4666.549] (-4676.500) -- 0:07:35
572000 -- [-4678.198] (-4678.972) (-4669.017) (-4684.397) * (-4667.746) (-4674.872) [-4673.629] (-4667.662) -- 0:07:34
573000 -- (-4675.977) (-4666.460) (-4684.981) [-4669.781] * (-4669.413) [-4663.720] (-4674.949) (-4678.731) -- 0:07:33
574000 -- [-4665.601] (-4685.452) (-4670.610) (-4671.970) * (-4680.618) [-4669.424] (-4664.315) (-4672.325) -- 0:07:31
575000 -- (-4673.913) (-4677.212) [-4665.903] (-4665.806) * (-4678.243) [-4674.039] (-4674.565) (-4667.935) -- 0:07:30
Average standard deviation of split frequencies: 0.010189
576000 -- (-4672.361) (-4673.556) [-4661.302] (-4679.498) * (-4685.274) (-4670.471) [-4660.816] (-4669.970) -- 0:07:29
577000 -- (-4673.616) [-4668.827] (-4668.027) (-4672.394) * (-4674.840) (-4660.512) [-4666.363] (-4672.185) -- 0:07:28
578000 -- [-4670.959] (-4672.927) (-4668.243) (-4679.613) * [-4671.949] (-4676.204) (-4679.294) (-4680.290) -- 0:07:27
579000 -- (-4674.699) (-4678.072) [-4673.697] (-4674.782) * [-4662.628] (-4670.188) (-4669.216) (-4673.921) -- 0:07:26
580000 -- (-4676.502) (-4674.177) [-4672.500] (-4664.113) * (-4666.865) (-4665.229) (-4678.474) [-4668.611] -- 0:07:25
Average standard deviation of split frequencies: 0.010554
581000 -- [-4675.603] (-4670.071) (-4661.903) (-4672.219) * (-4672.090) [-4671.031] (-4684.320) (-4674.380) -- 0:07:24
582000 -- [-4671.769] (-4671.228) (-4683.363) (-4683.674) * (-4670.362) [-4666.510] (-4671.797) (-4680.159) -- 0:07:23
583000 -- (-4667.586) (-4669.273) [-4666.997] (-4672.178) * [-4667.009] (-4668.187) (-4678.976) (-4677.391) -- 0:07:22
584000 -- [-4672.077] (-4673.186) (-4667.556) (-4675.105) * (-4668.811) [-4672.089] (-4662.095) (-4676.490) -- 0:07:21
585000 -- [-4673.205] (-4682.398) (-4674.492) (-4667.439) * (-4662.465) (-4666.971) [-4672.644] (-4662.049) -- 0:07:20
Average standard deviation of split frequencies: 0.009935
586000 -- (-4675.728) (-4678.912) (-4673.231) [-4670.157] * (-4704.455) (-4666.086) (-4663.916) [-4673.021] -- 0:07:19
587000 -- [-4671.273] (-4679.345) (-4680.176) (-4671.993) * (-4683.347) (-4676.716) (-4664.759) [-4664.186] -- 0:07:18
588000 -- (-4672.339) (-4675.101) (-4674.258) [-4676.758] * (-4673.538) (-4683.658) (-4668.692) [-4663.559] -- 0:07:17
589000 -- [-4669.780] (-4673.300) (-4675.489) (-4666.628) * (-4664.364) (-4678.668) [-4672.109] (-4675.887) -- 0:07:16
590000 -- (-4670.536) (-4664.160) [-4676.290] (-4670.693) * (-4663.287) [-4666.864] (-4669.817) (-4674.266) -- 0:07:15
Average standard deviation of split frequencies: 0.010136
591000 -- (-4664.534) (-4674.206) [-4668.367] (-4680.958) * (-4667.258) (-4665.995) [-4662.865] (-4679.201) -- 0:07:13
592000 -- (-4666.334) [-4669.891] (-4668.651) (-4680.782) * (-4668.887) [-4664.543] (-4668.119) (-4674.509) -- 0:07:12
593000 -- [-4671.771] (-4671.163) (-4668.355) (-4663.523) * [-4660.851] (-4671.871) (-4672.302) (-4670.619) -- 0:07:11
594000 -- (-4666.558) (-4670.121) (-4674.033) [-4666.139] * (-4672.073) (-4665.332) [-4667.045] (-4671.656) -- 0:07:10
595000 -- (-4673.101) (-4663.128) (-4673.356) [-4662.473] * (-4672.776) [-4662.397] (-4670.018) (-4672.897) -- 0:07:09
Average standard deviation of split frequencies: 0.010599
596000 -- (-4670.638) (-4675.277) (-4670.357) [-4667.613] * (-4677.275) [-4670.469] (-4675.270) (-4664.947) -- 0:07:08
597000 -- (-4662.164) [-4667.569] (-4673.381) (-4683.185) * (-4677.804) (-4664.329) (-4684.766) [-4670.394] -- 0:07:07
598000 -- (-4679.880) [-4665.757] (-4671.821) (-4682.342) * (-4682.354) (-4669.568) [-4672.825] (-4669.639) -- 0:07:06
599000 -- [-4671.778] (-4662.931) (-4676.036) (-4672.046) * (-4669.550) (-4666.500) (-4669.311) [-4674.065] -- 0:07:05
600000 -- (-4666.650) [-4671.997] (-4667.731) (-4673.823) * (-4673.489) [-4673.371] (-4677.099) (-4662.380) -- 0:07:04
Average standard deviation of split frequencies: 0.010556
601000 -- (-4675.765) [-4663.948] (-4670.239) (-4660.678) * (-4667.368) [-4663.721] (-4669.229) (-4676.297) -- 0:07:03
602000 -- (-4672.731) (-4663.530) (-4676.639) [-4668.982] * (-4669.783) [-4667.315] (-4666.768) (-4666.749) -- 0:07:02
603000 -- (-4672.690) (-4676.772) [-4675.045] (-4677.515) * [-4669.047] (-4668.394) (-4676.891) (-4682.102) -- 0:07:01
604000 -- (-4669.541) [-4666.219] (-4684.960) (-4679.284) * [-4677.749] (-4668.277) (-4667.587) (-4667.316) -- 0:07:00
605000 -- (-4669.330) (-4667.259) [-4668.491] (-4667.796) * [-4678.318] (-4670.498) (-4670.552) (-4676.588) -- 0:06:59
Average standard deviation of split frequencies: 0.010190
606000 -- (-4670.492) [-4661.464] (-4671.953) (-4673.801) * (-4680.561) [-4663.391] (-4672.903) (-4668.252) -- 0:06:58
607000 -- (-4665.628) (-4668.697) [-4664.236] (-4672.819) * (-4670.353) (-4668.338) [-4671.561] (-4671.748) -- 0:06:56
608000 -- (-4668.889) [-4671.643] (-4678.102) (-4670.953) * (-4676.934) [-4666.447] (-4674.530) (-4679.115) -- 0:06:55
609000 -- [-4665.872] (-4676.755) (-4667.312) (-4670.658) * [-4665.900] (-4665.723) (-4677.716) (-4674.394) -- 0:06:54
610000 -- [-4666.955] (-4678.325) (-4665.113) (-4668.492) * (-4669.175) [-4668.071] (-4665.998) (-4664.049) -- 0:06:53
Average standard deviation of split frequencies: 0.010576
611000 -- (-4674.258) [-4664.805] (-4671.030) (-4678.093) * (-4675.118) (-4669.586) [-4667.515] (-4670.775) -- 0:06:52
612000 -- (-4677.957) (-4677.256) [-4675.059] (-4683.009) * (-4672.820) [-4673.085] (-4670.896) (-4670.851) -- 0:06:51
613000 -- (-4671.899) [-4679.910] (-4676.831) (-4668.369) * [-4667.685] (-4677.970) (-4672.357) (-4677.426) -- 0:06:50
614000 -- [-4665.333] (-4677.366) (-4668.864) (-4660.966) * (-4667.797) (-4668.984) [-4662.522] (-4676.717) -- 0:06:49
615000 -- (-4670.799) (-4670.874) (-4683.568) [-4664.044] * [-4660.096] (-4674.560) (-4668.621) (-4675.024) -- 0:06:48
Average standard deviation of split frequencies: 0.010599
616000 -- (-4673.637) (-4672.961) [-4662.949] (-4684.991) * [-4671.087] (-4675.320) (-4675.297) (-4668.033) -- 0:06:47
617000 -- (-4674.931) (-4662.423) [-4662.684] (-4680.961) * [-4670.850] (-4675.782) (-4673.052) (-4668.676) -- 0:06:46
618000 -- [-4667.101] (-4661.449) (-4668.342) (-4665.442) * (-4671.400) (-4673.191) [-4671.233] (-4677.548) -- 0:06:45
619000 -- (-4667.397) (-4668.631) (-4673.258) [-4659.307] * (-4668.439) [-4687.218] (-4673.499) (-4668.321) -- 0:06:44
620000 -- (-4669.215) (-4678.745) (-4663.537) [-4667.330] * (-4675.533) (-4668.803) (-4675.766) [-4672.899] -- 0:06:43
Average standard deviation of split frequencies: 0.011089
621000 -- (-4673.013) (-4670.648) [-4665.238] (-4668.449) * (-4666.669) [-4670.146] (-4666.118) (-4665.698) -- 0:06:42
622000 -- (-4669.961) [-4670.487] (-4684.770) (-4670.489) * (-4681.163) (-4669.823) [-4672.034] (-4668.508) -- 0:06:41
623000 -- (-4679.176) [-4667.139] (-4673.137) (-4680.742) * [-4665.528] (-4684.523) (-4669.586) (-4671.050) -- 0:06:39
624000 -- (-4666.434) [-4667.143] (-4669.920) (-4678.463) * (-4677.200) (-4681.178) (-4678.156) [-4671.596] -- 0:06:38
625000 -- (-4672.661) (-4670.150) (-4676.139) [-4665.601] * [-4670.227] (-4667.376) (-4673.510) (-4673.292) -- 0:06:37
Average standard deviation of split frequencies: 0.011522
626000 -- (-4666.999) [-4665.232] (-4672.611) (-4674.292) * [-4674.094] (-4673.714) (-4671.920) (-4667.253) -- 0:06:36
627000 -- (-4668.849) (-4664.069) [-4667.436] (-4672.300) * (-4666.091) (-4676.381) (-4672.108) [-4668.382] -- 0:06:35
628000 -- (-4675.981) [-4669.512] (-4669.575) (-4678.517) * (-4673.923) (-4675.845) [-4672.330] (-4671.589) -- 0:06:34
629000 -- [-4668.258] (-4669.198) (-4676.004) (-4673.519) * [-4662.854] (-4667.107) (-4669.009) (-4671.056) -- 0:06:34
630000 -- (-4670.123) (-4672.473) [-4668.930] (-4670.804) * [-4661.937] (-4672.392) (-4675.726) (-4668.117) -- 0:06:32
Average standard deviation of split frequencies: 0.010988
631000 -- (-4667.751) (-4667.158) [-4666.064] (-4671.554) * (-4684.139) (-4680.196) [-4668.589] (-4673.366) -- 0:06:31
632000 -- [-4671.338] (-4675.979) (-4675.928) (-4664.742) * (-4672.075) (-4674.070) [-4659.413] (-4675.974) -- 0:06:30
633000 -- (-4668.588) (-4678.075) [-4671.873] (-4670.051) * (-4672.407) (-4667.934) (-4668.334) [-4682.862] -- 0:06:29
634000 -- [-4670.345] (-4677.301) (-4675.615) (-4677.589) * [-4665.754] (-4673.981) (-4668.130) (-4673.904) -- 0:06:28
635000 -- (-4672.937) (-4670.051) [-4668.328] (-4677.749) * [-4669.724] (-4676.884) (-4663.315) (-4664.773) -- 0:06:27
Average standard deviation of split frequencies: 0.011526
636000 -- (-4672.225) (-4667.396) [-4677.137] (-4681.071) * (-4670.301) (-4671.500) (-4664.333) [-4663.084] -- 0:06:26
637000 -- [-4665.117] (-4670.599) (-4672.598) (-4669.273) * (-4679.685) [-4668.149] (-4677.048) (-4670.921) -- 0:06:25
638000 -- (-4674.670) [-4668.990] (-4670.722) (-4672.397) * [-4675.035] (-4672.812) (-4678.218) (-4663.579) -- 0:06:24
639000 -- (-4680.652) (-4678.236) [-4664.735] (-4672.137) * (-4681.322) (-4661.617) [-4669.212] (-4674.176) -- 0:06:23
640000 -- (-4671.056) (-4675.632) (-4668.692) [-4661.395] * (-4678.160) [-4671.407] (-4667.375) (-4683.740) -- 0:06:21
Average standard deviation of split frequencies: 0.011037
641000 -- [-4668.737] (-4671.451) (-4672.817) (-4672.684) * (-4673.173) [-4666.263] (-4667.285) (-4665.765) -- 0:06:20
642000 -- (-4672.697) (-4663.541) (-4669.106) [-4662.182] * (-4677.711) [-4667.405] (-4668.672) (-4687.454) -- 0:06:19
643000 -- (-4660.979) [-4663.168] (-4676.919) (-4672.700) * (-4669.074) (-4669.328) [-4674.556] (-4676.541) -- 0:06:19
644000 -- [-4671.112] (-4667.547) (-4690.486) (-4665.381) * (-4679.695) (-4672.188) (-4666.049) [-4664.469] -- 0:06:18
645000 -- (-4676.000) [-4666.708] (-4680.205) (-4669.055) * (-4683.590) [-4675.203] (-4686.238) (-4676.315) -- 0:06:17
Average standard deviation of split frequencies: 0.010763
646000 -- (-4669.966) (-4668.343) (-4674.752) [-4667.696] * [-4666.952] (-4669.347) (-4676.917) (-4669.140) -- 0:06:15
647000 -- (-4660.812) [-4669.926] (-4673.913) (-4669.792) * (-4666.109) (-4673.378) [-4662.728] (-4676.479) -- 0:06:14
648000 -- (-4666.276) (-4678.151) [-4667.808] (-4673.161) * [-4671.542] (-4672.105) (-4674.968) (-4681.486) -- 0:06:13
649000 -- (-4668.193) (-4671.066) (-4675.045) [-4662.191] * (-4673.549) (-4674.538) [-4669.473] (-4668.029) -- 0:06:12
650000 -- (-4676.993) (-4672.783) [-4666.771] (-4668.023) * (-4673.893) (-4676.363) (-4675.049) [-4656.189] -- 0:06:11
Average standard deviation of split frequencies: 0.010541
651000 -- (-4667.182) (-4672.709) (-4673.432) [-4676.257] * (-4671.999) [-4665.608] (-4678.886) (-4669.629) -- 0:06:10
652000 -- (-4671.590) [-4665.448] (-4669.039) (-4665.173) * [-4671.079] (-4668.795) (-4692.659) (-4669.347) -- 0:06:09
653000 -- (-4660.646) (-4695.077) (-4661.881) [-4674.896] * (-4666.209) (-4669.765) (-4667.550) [-4663.564] -- 0:06:08
654000 -- (-4672.897) (-4677.174) [-4666.466] (-4673.793) * [-4671.684] (-4667.923) (-4664.419) (-4677.067) -- 0:06:07
655000 -- (-4673.517) (-4674.791) (-4670.504) [-4670.114] * [-4669.981] (-4668.135) (-4674.635) (-4676.418) -- 0:06:06
Average standard deviation of split frequencies: 0.010599
656000 -- [-4662.846] (-4674.077) (-4674.668) (-4673.343) * [-4663.321] (-4671.309) (-4669.967) (-4679.067) -- 0:06:04
657000 -- [-4665.973] (-4668.213) (-4684.628) (-4670.041) * [-4680.907] (-4672.712) (-4671.416) (-4669.143) -- 0:06:03
658000 -- (-4678.449) (-4688.722) (-4684.037) [-4684.969] * (-4674.641) [-4664.519] (-4674.740) (-4671.194) -- 0:06:02
659000 -- (-4679.169) [-4668.403] (-4669.910) (-4668.690) * (-4676.951) (-4667.677) (-4670.619) [-4671.651] -- 0:06:02
660000 -- (-4681.363) (-4678.069) [-4671.851] (-4675.843) * (-4665.392) (-4682.952) (-4672.601) [-4667.595] -- 0:06:01
Average standard deviation of split frequencies: 0.010703
661000 -- (-4670.402) (-4671.126) [-4664.825] (-4674.340) * (-4672.543) [-4667.303] (-4676.966) (-4674.959) -- 0:06:00
662000 -- (-4672.045) (-4677.578) [-4668.849] (-4673.400) * (-4664.743) (-4672.598) (-4680.386) [-4679.064] -- 0:05:58
663000 -- (-4674.570) [-4671.974] (-4679.014) (-4675.677) * [-4659.110] (-4676.036) (-4674.181) (-4672.098) -- 0:05:57
664000 -- (-4665.756) [-4662.651] (-4669.143) (-4672.691) * [-4674.178] (-4674.297) (-4668.953) (-4672.272) -- 0:05:56
665000 -- (-4672.939) [-4665.107] (-4667.043) (-4684.985) * (-4674.250) [-4667.155] (-4667.035) (-4667.265) -- 0:05:55
Average standard deviation of split frequencies: 0.010723
666000 -- [-4671.500] (-4669.342) (-4673.000) (-4669.120) * (-4678.196) [-4671.649] (-4676.758) (-4673.953) -- 0:05:54
667000 -- (-4664.549) (-4675.073) (-4673.186) [-4670.270] * (-4673.430) [-4667.953] (-4674.067) (-4681.352) -- 0:05:53
668000 -- [-4660.531] (-4680.413) (-4678.356) (-4683.785) * (-4668.720) (-4669.380) [-4666.239] (-4671.998) -- 0:05:52
669000 -- (-4667.113) (-4672.168) [-4668.595] (-4677.210) * (-4675.153) [-4673.360] (-4663.109) (-4666.669) -- 0:05:51
670000 -- (-4674.337) (-4670.901) [-4670.107] (-4674.185) * (-4670.922) (-4672.312) [-4665.359] (-4671.085) -- 0:05:50
Average standard deviation of split frequencies: 0.010543
671000 -- (-4670.162) [-4672.694] (-4669.107) (-4675.664) * (-4686.164) [-4673.691] (-4669.534) (-4670.746) -- 0:05:49
672000 -- (-4667.843) (-4679.158) [-4660.350] (-4680.708) * (-4670.695) (-4679.907) [-4671.708] (-4679.587) -- 0:05:48
673000 -- [-4659.058] (-4668.830) (-4664.268) (-4670.033) * [-4674.684] (-4668.839) (-4673.456) (-4685.068) -- 0:05:47
674000 -- (-4674.281) [-4671.147] (-4673.286) (-4677.340) * (-4676.997) (-4681.452) [-4672.151] (-4672.485) -- 0:05:46
675000 -- (-4668.247) (-4683.567) (-4678.593) [-4660.680] * [-4673.971] (-4660.502) (-4671.912) (-4676.498) -- 0:05:45
Average standard deviation of split frequencies: 0.010460
676000 -- (-4669.166) (-4675.245) [-4680.346] (-4670.638) * (-4675.890) (-4667.809) (-4666.020) [-4667.609] -- 0:05:44
677000 -- (-4668.609) (-4677.035) [-4680.576] (-4670.512) * (-4670.456) (-4675.584) [-4659.874] (-4670.754) -- 0:05:43
678000 -- (-4670.159) (-4667.127) (-4674.918) [-4668.814] * (-4678.010) [-4667.069] (-4666.698) (-4669.912) -- 0:05:41
679000 -- (-4684.034) (-4672.442) (-4665.752) [-4664.129] * (-4666.656) (-4676.433) [-4662.077] (-4670.577) -- 0:05:40
680000 -- (-4670.590) [-4670.624] (-4671.907) (-4668.568) * [-4668.302] (-4666.999) (-4675.151) (-4679.376) -- 0:05:39
Average standard deviation of split frequencies: 0.010111
681000 -- (-4663.674) (-4672.926) [-4661.795] (-4667.036) * (-4678.195) (-4673.749) (-4682.984) [-4669.108] -- 0:05:38
682000 -- (-4679.903) (-4675.595) (-4678.731) [-4668.745] * (-4666.273) [-4663.649] (-4669.626) (-4657.031) -- 0:05:37
683000 -- (-4679.093) [-4671.623] (-4666.662) (-4667.646) * (-4673.227) (-4675.312) [-4668.059] (-4673.918) -- 0:05:36
684000 -- (-4670.658) (-4678.154) (-4679.015) [-4661.623] * [-4665.823] (-4676.684) (-4678.547) (-4676.028) -- 0:05:35
685000 -- [-4670.592] (-4668.499) (-4679.385) (-4670.415) * [-4670.375] (-4669.592) (-4682.083) (-4668.175) -- 0:05:34
Average standard deviation of split frequencies: 0.009930
686000 -- [-4664.674] (-4684.973) (-4666.853) (-4676.680) * (-4673.906) (-4678.288) [-4670.872] (-4663.007) -- 0:05:33
687000 -- [-4670.378] (-4671.433) (-4663.875) (-4669.014) * (-4672.768) (-4663.667) (-4675.144) [-4668.944] -- 0:05:32
688000 -- (-4672.400) (-4668.209) (-4664.913) [-4671.669] * (-4679.556) [-4672.395] (-4679.067) (-4673.724) -- 0:05:31
689000 -- (-4670.946) [-4666.611] (-4669.674) (-4670.377) * (-4682.809) [-4681.489] (-4666.199) (-4676.529) -- 0:05:29
690000 -- (-4667.621) [-4671.229] (-4672.206) (-4667.114) * (-4669.197) (-4682.690) (-4664.026) [-4670.330] -- 0:05:28
Average standard deviation of split frequencies: 0.010272
691000 -- (-4671.685) [-4667.383] (-4689.366) (-4669.150) * (-4670.893) (-4691.072) [-4672.048] (-4681.372) -- 0:05:27
692000 -- (-4673.453) (-4663.322) [-4673.072] (-4671.399) * (-4673.352) [-4678.073] (-4673.647) (-4679.910) -- 0:05:26
693000 -- (-4668.796) (-4675.671) [-4671.258] (-4669.423) * (-4677.149) [-4668.846] (-4677.599) (-4676.998) -- 0:05:26
694000 -- (-4672.654) [-4670.165] (-4681.115) (-4671.574) * (-4675.184) (-4672.386) [-4668.031] (-4688.251) -- 0:05:24
695000 -- (-4672.392) (-4667.437) [-4668.718] (-4679.459) * (-4671.583) [-4663.756] (-4673.236) (-4679.088) -- 0:05:23
Average standard deviation of split frequencies: 0.009821
696000 -- (-4677.641) (-4676.335) (-4664.782) [-4685.405] * (-4671.108) [-4669.912] (-4674.912) (-4670.612) -- 0:05:22
697000 -- [-4661.521] (-4684.216) (-4672.957) (-4678.918) * (-4672.603) (-4671.454) (-4667.611) [-4667.634] -- 0:05:21
698000 -- [-4670.469] (-4674.408) (-4676.907) (-4670.244) * (-4665.474) (-4674.871) [-4664.440] (-4669.050) -- 0:05:20
699000 -- (-4670.296) (-4686.528) [-4665.689] (-4668.126) * (-4662.412) [-4663.353] (-4667.010) (-4677.442) -- 0:05:19
700000 -- (-4669.763) (-4672.828) (-4673.480) [-4668.933] * (-4670.631) [-4673.359] (-4664.688) (-4677.218) -- 0:05:18
Average standard deviation of split frequencies: 0.009015
701000 -- (-4672.314) (-4676.754) (-4680.068) [-4670.853] * [-4666.116] (-4679.699) (-4667.402) (-4679.878) -- 0:05:17
702000 -- (-4667.232) (-4670.966) (-4672.443) [-4664.962] * (-4676.751) (-4673.023) (-4670.277) [-4666.636] -- 0:05:16
703000 -- (-4676.698) [-4669.905] (-4662.088) (-4680.074) * [-4670.563] (-4686.585) (-4668.954) (-4677.834) -- 0:05:15
704000 -- (-4672.903) [-4665.894] (-4665.794) (-4671.171) * (-4672.663) [-4664.367] (-4667.879) (-4680.912) -- 0:05:14
705000 -- (-4682.837) (-4671.305) [-4670.513] (-4671.304) * (-4667.790) (-4665.691) [-4665.891] (-4681.496) -- 0:05:12
Average standard deviation of split frequencies: 0.009248
706000 -- (-4673.150) (-4675.201) [-4666.836] (-4674.527) * (-4669.792) (-4678.612) (-4676.602) [-4672.219] -- 0:05:11
707000 -- (-4689.517) [-4665.997] (-4674.632) (-4673.871) * (-4674.870) (-4677.300) [-4667.855] (-4671.555) -- 0:05:10
708000 -- (-4665.784) (-4672.487) (-4676.186) [-4681.175] * (-4667.806) (-4675.854) [-4666.767] (-4670.992) -- 0:05:09
709000 -- [-4670.778] (-4665.100) (-4673.337) (-4668.183) * (-4678.206) (-4677.532) [-4670.036] (-4672.169) -- 0:05:08
710000 -- (-4670.578) (-4674.961) (-4678.709) [-4664.338] * (-4675.311) (-4671.614) [-4671.237] (-4663.415) -- 0:05:07
Average standard deviation of split frequencies: 0.009983
711000 -- (-4667.222) [-4678.759] (-4670.190) (-4670.677) * (-4679.806) [-4671.920] (-4683.660) (-4677.948) -- 0:05:06
712000 -- [-4664.489] (-4672.478) (-4667.788) (-4676.794) * (-4666.913) [-4661.454] (-4683.261) (-4679.637) -- 0:05:05
713000 -- (-4667.619) [-4666.306] (-4669.049) (-4682.154) * [-4670.022] (-4680.708) (-4678.214) (-4672.346) -- 0:05:04
714000 -- (-4668.757) [-4662.249] (-4682.596) (-4677.630) * (-4670.550) [-4675.720] (-4679.341) (-4676.370) -- 0:05:03
715000 -- (-4662.622) (-4666.207) (-4670.120) [-4668.711] * (-4671.778) (-4677.436) (-4673.550) [-4671.197] -- 0:05:02
Average standard deviation of split frequencies: 0.009349
716000 -- [-4665.292] (-4671.447) (-4670.353) (-4668.910) * (-4672.207) (-4674.449) [-4674.986] (-4662.747) -- 0:05:01
717000 -- (-4675.347) [-4670.758] (-4668.642) (-4673.176) * (-4672.768) (-4666.265) (-4672.155) [-4670.075] -- 0:05:00
718000 -- (-4683.451) (-4677.862) (-4667.951) [-4677.043] * (-4666.429) (-4677.216) [-4659.105] (-4681.502) -- 0:04:59
719000 -- (-4669.739) (-4675.164) (-4677.984) [-4662.499] * (-4673.334) (-4670.078) (-4663.450) [-4668.013] -- 0:04:58
720000 -- [-4674.913] (-4677.564) (-4669.330) (-4673.911) * [-4664.477] (-4668.884) (-4672.823) (-4670.042) -- 0:04:57
Average standard deviation of split frequencies: 0.009550
721000 -- (-4671.041) (-4669.587) (-4669.252) [-4677.407] * [-4680.552] (-4667.720) (-4678.406) (-4666.197) -- 0:04:56
722000 -- (-4677.069) (-4665.207) [-4663.829] (-4667.718) * (-4673.014) (-4671.172) (-4672.676) [-4669.181] -- 0:04:54
723000 -- (-4668.786) (-4668.793) [-4679.620] (-4669.343) * (-4673.619) (-4679.751) (-4670.921) [-4662.841] -- 0:04:53
724000 -- (-4683.246) (-4675.950) [-4665.053] (-4668.674) * [-4670.079] (-4678.990) (-4677.210) (-4668.108) -- 0:04:52
725000 -- (-4667.467) [-4663.521] (-4676.015) (-4679.017) * (-4674.349) [-4674.733] (-4676.278) (-4668.752) -- 0:04:51
Average standard deviation of split frequencies: 0.009740
726000 -- [-4665.516] (-4673.672) (-4666.412) (-4680.000) * [-4660.677] (-4665.704) (-4668.356) (-4668.022) -- 0:04:50
727000 -- [-4671.596] (-4668.273) (-4671.413) (-4679.856) * (-4675.720) (-4677.290) [-4660.815] (-4671.608) -- 0:04:49
728000 -- (-4668.262) (-4664.726) (-4691.834) [-4660.189] * (-4671.151) [-4670.841] (-4669.421) (-4671.314) -- 0:04:48
729000 -- (-4668.772) (-4675.149) [-4670.055] (-4674.824) * [-4662.945] (-4667.499) (-4671.139) (-4680.198) -- 0:04:47
730000 -- (-4676.611) [-4676.987] (-4670.101) (-4669.341) * [-4675.813] (-4672.232) (-4674.273) (-4669.624) -- 0:04:46
Average standard deviation of split frequencies: 0.009710
731000 -- (-4670.958) (-4675.414) [-4665.354] (-4666.728) * (-4671.898) (-4671.122) (-4671.452) [-4667.751] -- 0:04:45
732000 -- (-4679.551) (-4675.754) (-4687.998) [-4662.886] * (-4677.316) (-4670.910) [-4670.559] (-4668.879) -- 0:04:44
733000 -- (-4671.376) (-4669.430) [-4667.253] (-4671.767) * (-4676.838) (-4673.371) (-4679.311) [-4663.667] -- 0:04:43
734000 -- (-4679.611) (-4686.560) [-4667.058] (-4673.653) * (-4668.075) [-4667.294] (-4680.960) (-4670.160) -- 0:04:42
735000 -- (-4676.967) [-4663.431] (-4664.533) (-4673.331) * (-4672.771) (-4663.767) (-4674.534) [-4668.520] -- 0:04:41
Average standard deviation of split frequencies: 0.010088
736000 -- (-4685.800) [-4675.565] (-4671.634) (-4670.185) * (-4683.440) [-4663.187] (-4675.091) (-4677.738) -- 0:04:40
737000 -- (-4672.934) (-4679.234) [-4666.387] (-4675.520) * [-4663.427] (-4669.490) (-4672.458) (-4676.313) -- 0:04:39
738000 -- (-4672.350) (-4676.893) (-4675.759) [-4661.360] * (-4671.151) [-4667.451] (-4675.889) (-4677.376) -- 0:04:37
739000 -- (-4667.881) (-4671.430) (-4680.042) [-4661.437] * (-4669.535) (-4675.692) (-4665.016) [-4662.964] -- 0:04:36
740000 -- (-4664.107) (-4674.175) (-4672.822) [-4677.331] * [-4668.867] (-4672.014) (-4674.811) (-4679.292) -- 0:04:35
Average standard deviation of split frequencies: 0.009897
741000 -- [-4663.790] (-4681.427) (-4669.557) (-4670.911) * (-4668.121) [-4674.390] (-4677.952) (-4676.878) -- 0:04:34
742000 -- [-4669.235] (-4673.539) (-4662.332) (-4664.581) * (-4682.146) (-4671.053) [-4674.716] (-4673.554) -- 0:04:33
743000 -- [-4681.743] (-4685.490) (-4676.513) (-4677.094) * [-4655.362] (-4673.873) (-4672.271) (-4671.318) -- 0:04:32
744000 -- [-4670.423] (-4691.481) (-4661.425) (-4657.444) * (-4674.677) (-4671.545) [-4663.460] (-4678.966) -- 0:04:31
745000 -- (-4680.121) (-4682.185) [-4668.082] (-4671.329) * (-4671.482) [-4668.856] (-4688.150) (-4671.622) -- 0:04:30
Average standard deviation of split frequencies: 0.010174
746000 -- [-4666.439] (-4671.596) (-4675.804) (-4667.678) * (-4664.995) [-4663.515] (-4682.069) (-4675.352) -- 0:04:29
747000 -- [-4666.877] (-4674.328) (-4678.894) (-4669.272) * (-4667.280) [-4667.145] (-4671.502) (-4674.415) -- 0:04:28
748000 -- (-4667.220) (-4676.274) [-4670.561] (-4677.290) * [-4670.925] (-4680.501) (-4671.275) (-4668.083) -- 0:04:27
749000 -- (-4676.908) [-4666.490] (-4676.687) (-4678.281) * (-4680.579) (-4666.852) [-4668.938] (-4668.478) -- 0:04:26
750000 -- [-4664.721] (-4668.747) (-4670.446) (-4668.535) * (-4691.034) (-4668.256) [-4660.069] (-4670.226) -- 0:04:25
Average standard deviation of split frequencies: 0.009954
751000 -- (-4663.106) (-4673.865) (-4696.264) [-4679.597] * [-4674.814] (-4667.661) (-4667.371) (-4680.873) -- 0:04:24
752000 -- (-4669.549) (-4671.131) (-4668.055) [-4669.701] * (-4666.613) [-4671.574] (-4673.270) (-4682.092) -- 0:04:23
753000 -- [-4669.751] (-4666.083) (-4669.545) (-4661.824) * [-4678.735] (-4673.092) (-4673.172) (-4677.223) -- 0:04:22
754000 -- (-4674.344) (-4671.884) (-4681.666) [-4668.749] * (-4668.416) [-4670.268] (-4666.799) (-4676.150) -- 0:04:21
755000 -- [-4663.843] (-4678.259) (-4672.289) (-4675.170) * (-4668.165) (-4671.453) [-4662.687] (-4682.769) -- 0:04:19
Average standard deviation of split frequencies: 0.009447
756000 -- (-4679.516) (-4673.205) (-4677.613) [-4674.848] * (-4673.504) [-4664.569] (-4674.854) (-4673.933) -- 0:04:18
757000 -- (-4671.583) (-4678.341) [-4664.335] (-4672.927) * (-4677.187) [-4660.412] (-4676.115) (-4671.791) -- 0:04:17
758000 -- (-4687.325) (-4673.783) [-4668.809] (-4668.414) * (-4671.159) [-4668.708] (-4673.406) (-4671.040) -- 0:04:16
759000 -- (-4677.359) (-4668.626) [-4675.471] (-4677.923) * (-4662.265) (-4669.171) (-4677.398) [-4666.262] -- 0:04:15
760000 -- (-4668.207) (-4667.332) [-4671.710] (-4676.058) * (-4679.882) (-4670.879) (-4666.215) [-4672.435] -- 0:04:14
Average standard deviation of split frequencies: 0.009048
761000 -- (-4669.562) [-4666.694] (-4663.904) (-4676.338) * [-4665.233] (-4679.077) (-4678.550) (-4673.562) -- 0:04:13
762000 -- (-4684.979) (-4669.822) [-4671.805] (-4668.774) * (-4675.836) [-4664.759] (-4672.020) (-4667.004) -- 0:04:12
763000 -- (-4678.821) (-4667.683) (-4669.065) [-4668.268] * (-4668.896) [-4666.307] (-4673.874) (-4662.416) -- 0:04:11
764000 -- (-4666.003) [-4663.213] (-4667.212) (-4679.201) * (-4687.049) (-4671.811) (-4671.002) [-4673.058] -- 0:04:10
765000 -- (-4668.644) [-4668.850] (-4677.150) (-4677.467) * (-4666.417) (-4679.560) (-4669.218) [-4671.360] -- 0:04:09
Average standard deviation of split frequencies: 0.009170
766000 -- (-4677.741) (-4670.753) (-4685.673) [-4675.119] * (-4674.168) [-4668.437] (-4670.334) (-4670.475) -- 0:04:08
767000 -- [-4674.142] (-4676.858) (-4678.494) (-4675.025) * (-4680.542) (-4663.333) [-4666.209] (-4670.437) -- 0:04:07
768000 -- (-4681.628) [-4673.299] (-4670.035) (-4676.754) * (-4667.077) (-4676.122) [-4665.667] (-4668.974) -- 0:04:06
769000 -- [-4665.489] (-4677.135) (-4670.668) (-4671.625) * (-4666.478) (-4668.318) [-4671.124] (-4669.670) -- 0:04:05
770000 -- [-4680.643] (-4673.535) (-4673.174) (-4665.344) * (-4668.486) (-4668.049) [-4667.253] (-4664.559) -- 0:04:04
Average standard deviation of split frequencies: 0.009298
771000 -- (-4670.156) [-4670.556] (-4669.020) (-4668.316) * (-4666.475) (-4670.231) (-4683.726) [-4665.426] -- 0:04:02
772000 -- (-4672.125) (-4671.522) [-4664.212] (-4668.439) * (-4665.384) (-4678.927) [-4670.608] (-4671.407) -- 0:04:01
773000 -- (-4669.445) (-4671.184) (-4666.836) [-4669.247] * (-4679.446) (-4671.163) (-4677.599) [-4669.402] -- 0:04:00
774000 -- (-4666.866) [-4670.536] (-4664.673) (-4676.454) * (-4661.214) (-4676.386) [-4669.197] (-4673.494) -- 0:03:59
775000 -- [-4666.701] (-4670.300) (-4678.007) (-4672.707) * (-4678.180) (-4683.949) (-4669.648) [-4670.836] -- 0:03:58
Average standard deviation of split frequencies: 0.008808
776000 -- [-4661.693] (-4671.480) (-4671.650) (-4666.888) * (-4672.802) [-4676.239] (-4662.572) (-4668.683) -- 0:03:57
777000 -- [-4665.829] (-4662.526) (-4670.765) (-4668.553) * (-4671.791) [-4673.980] (-4673.493) (-4667.149) -- 0:03:56
778000 -- (-4672.206) [-4662.833] (-4666.417) (-4671.883) * (-4666.243) [-4669.705] (-4670.260) (-4679.194) -- 0:03:55
779000 -- (-4681.061) (-4672.328) [-4673.565] (-4672.777) * [-4667.932] (-4670.689) (-4669.488) (-4678.896) -- 0:03:54
780000 -- [-4665.348] (-4674.228) (-4684.085) (-4677.644) * (-4684.319) (-4671.035) (-4662.063) [-4673.282] -- 0:03:53
Average standard deviation of split frequencies: 0.008635
781000 -- (-4669.948) (-4675.290) [-4682.024] (-4671.519) * (-4679.004) (-4672.177) (-4661.225) [-4668.979] -- 0:03:52
782000 -- [-4674.866] (-4669.977) (-4676.205) (-4679.931) * (-4671.841) (-4675.667) [-4668.075] (-4673.947) -- 0:03:51
783000 -- (-4676.067) (-4668.275) (-4668.888) [-4663.973] * (-4678.069) (-4673.693) (-4666.413) [-4669.370] -- 0:03:50
784000 -- (-4679.727) (-4662.624) (-4664.170) [-4676.180] * (-4670.686) (-4680.772) [-4674.880] (-4675.734) -- 0:03:49
785000 -- (-4674.198) (-4666.566) [-4663.761] (-4678.565) * (-4679.712) (-4663.312) (-4677.582) [-4672.568] -- 0:03:48
Average standard deviation of split frequencies: 0.008456
786000 -- (-4676.500) (-4671.818) (-4675.329) [-4674.807] * (-4665.207) (-4671.335) (-4675.949) [-4670.286] -- 0:03:47
787000 -- [-4671.018] (-4674.782) (-4667.044) (-4689.180) * (-4663.403) [-4668.332] (-4668.920) (-4666.436) -- 0:03:45
788000 -- (-4672.991) (-4665.189) [-4668.571] (-4671.051) * [-4672.808] (-4667.414) (-4675.162) (-4673.936) -- 0:03:44
789000 -- (-4686.711) [-4671.570] (-4668.083) (-4672.354) * (-4675.002) [-4683.015] (-4677.296) (-4670.691) -- 0:03:43
790000 -- (-4669.207) (-4667.201) (-4674.348) [-4667.088] * (-4661.202) [-4674.083] (-4677.530) (-4677.207) -- 0:03:42
Average standard deviation of split frequencies: 0.008049
791000 -- [-4670.318] (-4667.638) (-4676.662) (-4667.580) * (-4671.559) (-4686.965) (-4675.738) [-4660.569] -- 0:03:41
792000 -- (-4680.377) [-4669.670] (-4677.658) (-4680.212) * (-4671.298) [-4669.113] (-4677.820) (-4666.794) -- 0:03:40
793000 -- [-4662.356] (-4669.545) (-4671.385) (-4674.617) * (-4662.495) [-4660.813] (-4671.303) (-4668.664) -- 0:03:39
794000 -- (-4662.753) (-4674.840) [-4666.951] (-4673.354) * (-4679.129) (-4664.061) [-4665.819] (-4673.900) -- 0:03:38
795000 -- (-4677.300) (-4667.118) [-4681.853] (-4668.950) * (-4671.537) (-4670.245) (-4672.183) [-4664.199] -- 0:03:37
Average standard deviation of split frequencies: 0.008084
796000 -- (-4676.561) (-4677.321) (-4675.695) [-4674.711] * (-4669.699) (-4664.673) [-4665.077] (-4674.456) -- 0:03:36
797000 -- (-4667.836) (-4669.008) (-4663.175) [-4676.426] * (-4671.309) (-4683.087) (-4666.185) [-4675.753] -- 0:03:35
798000 -- (-4662.176) (-4682.910) [-4663.499] (-4667.991) * (-4680.590) (-4675.200) (-4670.702) [-4669.419] -- 0:03:34
799000 -- (-4667.297) [-4670.891] (-4667.861) (-4674.296) * [-4662.524] (-4676.783) (-4674.457) (-4671.612) -- 0:03:33
800000 -- (-4670.169) (-4669.388) [-4664.731] (-4688.770) * [-4671.738] (-4672.714) (-4678.983) (-4677.216) -- 0:03:32
Average standard deviation of split frequencies: 0.008272
801000 -- (-4675.603) (-4664.343) (-4669.204) [-4671.441] * (-4680.767) [-4667.349] (-4679.089) (-4674.952) -- 0:03:31
802000 -- (-4664.715) (-4667.657) (-4674.989) [-4674.389] * [-4671.164] (-4668.562) (-4669.216) (-4671.791) -- 0:03:30
803000 -- (-4672.294) (-4667.534) [-4667.506] (-4661.442) * (-4679.213) [-4670.398] (-4675.677) (-4684.745) -- 0:03:29
804000 -- [-4664.466] (-4676.983) (-4669.275) (-4685.016) * (-4661.637) (-4673.892) [-4665.369] (-4679.945) -- 0:03:27
805000 -- (-4676.333) (-4664.880) [-4670.002] (-4680.039) * (-4678.867) (-4673.474) (-4669.853) [-4666.012] -- 0:03:26
Average standard deviation of split frequencies: 0.008130
806000 -- (-4678.642) (-4674.948) [-4670.584] (-4671.531) * (-4673.491) (-4672.659) [-4671.430] (-4662.123) -- 0:03:25
807000 -- (-4675.693) (-4666.634) [-4668.085] (-4674.519) * [-4666.866] (-4675.816) (-4686.018) (-4662.386) -- 0:03:24
808000 -- (-4672.460) (-4664.596) (-4673.341) [-4673.654] * (-4664.128) (-4669.704) [-4667.311] (-4667.096) -- 0:03:23
809000 -- (-4675.658) (-4679.681) (-4670.488) [-4669.848] * (-4671.548) (-4672.389) (-4678.533) [-4668.356] -- 0:03:22
810000 -- (-4676.580) [-4672.292] (-4678.025) (-4680.053) * (-4676.884) [-4659.495] (-4670.177) (-4675.537) -- 0:03:21
Average standard deviation of split frequencies: 0.007850
811000 -- [-4673.162] (-4674.502) (-4675.980) (-4673.205) * (-4673.918) [-4665.320] (-4674.426) (-4669.627) -- 0:03:20
812000 -- (-4675.682) (-4673.770) (-4674.139) [-4658.969] * [-4660.908] (-4667.661) (-4663.921) (-4683.004) -- 0:03:19
813000 -- (-4669.842) [-4667.902] (-4669.550) (-4672.686) * (-4663.561) (-4670.421) (-4673.392) [-4673.097] -- 0:03:18
814000 -- [-4665.831] (-4674.027) (-4663.643) (-4677.561) * [-4670.783] (-4678.027) (-4683.576) (-4675.079) -- 0:03:17
815000 -- (-4673.205) (-4672.699) (-4672.220) [-4669.111] * (-4670.941) [-4665.772] (-4673.680) (-4676.192) -- 0:03:16
Average standard deviation of split frequencies: 0.008059
816000 -- (-4674.123) (-4670.818) [-4665.398] (-4672.974) * (-4682.930) (-4671.586) [-4675.064] (-4677.608) -- 0:03:15
817000 -- (-4677.318) [-4660.053] (-4668.845) (-4667.945) * (-4669.823) [-4667.686] (-4679.239) (-4676.445) -- 0:03:14
818000 -- (-4672.034) (-4676.836) (-4677.775) [-4668.453] * (-4672.823) [-4666.738] (-4668.697) (-4668.773) -- 0:03:13
819000 -- (-4688.059) (-4674.833) (-4666.062) [-4676.121] * (-4672.192) [-4661.885] (-4681.400) (-4688.538) -- 0:03:12
820000 -- (-4675.963) [-4667.401] (-4673.278) (-4674.896) * [-4670.306] (-4665.748) (-4666.175) (-4674.869) -- 0:03:10
Average standard deviation of split frequencies: 0.008415
821000 -- [-4668.591] (-4667.248) (-4678.948) (-4675.463) * (-4669.592) (-4677.785) (-4670.093) [-4678.827] -- 0:03:09
822000 -- (-4674.263) (-4679.719) (-4674.026) [-4664.136] * (-4665.241) (-4662.515) [-4666.625] (-4672.515) -- 0:03:08
823000 -- (-4676.777) (-4671.283) [-4666.124] (-4672.700) * (-4667.583) [-4666.912] (-4680.950) (-4665.510) -- 0:03:07
824000 -- (-4687.076) (-4670.471) (-4677.282) [-4673.970] * (-4673.192) [-4667.594] (-4671.309) (-4676.424) -- 0:03:06
825000 -- (-4676.424) (-4679.454) [-4671.284] (-4678.370) * (-4677.605) (-4680.175) (-4661.778) [-4662.899] -- 0:03:05
Average standard deviation of split frequencies: 0.008418
826000 -- (-4659.034) [-4670.424] (-4686.436) (-4676.231) * [-4664.962] (-4662.246) (-4677.182) (-4670.091) -- 0:03:04
827000 -- (-4667.324) (-4658.114) (-4668.759) [-4671.055] * [-4670.484] (-4675.770) (-4666.060) (-4677.725) -- 0:03:03
828000 -- [-4666.558] (-4676.720) (-4674.739) (-4669.651) * [-4663.718] (-4683.937) (-4672.048) (-4670.432) -- 0:03:02
829000 -- (-4665.204) (-4669.439) (-4680.482) [-4666.226] * (-4664.854) (-4678.131) [-4671.794] (-4669.611) -- 0:03:01
830000 -- [-4671.887] (-4679.161) (-4677.869) (-4662.270) * (-4666.748) (-4680.714) (-4677.948) [-4676.773] -- 0:03:00
Average standard deviation of split frequencies: 0.008172
831000 -- [-4672.864] (-4673.881) (-4673.859) (-4680.496) * (-4678.696) (-4677.062) (-4685.531) [-4670.017] -- 0:02:59
832000 -- (-4672.916) [-4658.554] (-4678.758) (-4672.175) * (-4678.403) (-4669.334) [-4670.824] (-4671.197) -- 0:02:58
833000 -- (-4676.537) [-4670.237] (-4675.513) (-4670.227) * (-4667.822) [-4665.536] (-4680.078) (-4667.527) -- 0:02:57
834000 -- (-4670.532) (-4666.935) (-4680.808) [-4667.071] * (-4675.510) (-4673.389) [-4670.870] (-4677.980) -- 0:02:56
835000 -- (-4671.025) [-4670.139] (-4671.287) (-4666.795) * [-4679.940] (-4664.871) (-4677.254) (-4674.300) -- 0:02:55
Average standard deviation of split frequencies: 0.008007
836000 -- (-4678.102) (-4681.966) (-4679.950) [-4665.161] * (-4665.329) (-4678.224) [-4661.505] (-4666.785) -- 0:02:54
837000 -- (-4675.990) [-4668.852] (-4672.765) (-4663.703) * (-4691.986) [-4667.365] (-4665.212) (-4668.943) -- 0:02:52
838000 -- [-4679.017] (-4673.001) (-4671.345) (-4668.091) * (-4674.244) [-4672.144] (-4668.563) (-4668.751) -- 0:02:51
839000 -- (-4678.335) (-4671.521) [-4667.798] (-4664.892) * (-4671.554) (-4675.253) (-4665.009) [-4662.964] -- 0:02:50
840000 -- (-4683.536) (-4670.539) (-4669.364) [-4669.949] * [-4668.842] (-4683.557) (-4680.753) (-4661.605) -- 0:02:49
Average standard deviation of split frequencies: 0.007682
841000 -- (-4666.635) (-4669.980) [-4673.228] (-4676.967) * (-4670.842) (-4692.574) (-4682.545) [-4666.296] -- 0:02:48
842000 -- (-4673.391) (-4669.391) (-4674.809) [-4678.859] * (-4669.202) (-4675.702) (-4663.254) [-4664.721] -- 0:02:47
843000 -- (-4668.428) (-4665.751) (-4676.232) [-4662.827] * (-4661.951) [-4674.909] (-4668.148) (-4673.950) -- 0:02:46
844000 -- (-4680.753) (-4666.601) [-4676.706] (-4679.758) * (-4662.887) [-4668.083] (-4674.357) (-4677.045) -- 0:02:45
845000 -- (-4669.216) (-4666.694) [-4663.847] (-4680.968) * (-4673.200) (-4670.513) (-4669.735) [-4665.078] -- 0:02:44
Average standard deviation of split frequencies: 0.007857
846000 -- (-4668.081) (-4667.389) [-4675.132] (-4666.610) * (-4671.026) [-4671.306] (-4672.627) (-4670.301) -- 0:02:43
847000 -- (-4680.859) (-4675.265) (-4677.770) [-4671.403] * (-4673.244) (-4683.956) (-4678.830) [-4666.574] -- 0:02:42
848000 -- (-4670.301) [-4670.132] (-4671.149) (-4676.916) * (-4675.869) [-4669.738] (-4669.662) (-4667.105) -- 0:02:41
849000 -- [-4668.038] (-4665.660) (-4672.053) (-4676.311) * [-4665.632] (-4669.437) (-4673.670) (-4681.543) -- 0:02:40
850000 -- [-4668.752] (-4669.424) (-4678.987) (-4663.215) * [-4672.429] (-4676.184) (-4668.440) (-4668.939) -- 0:02:39
Average standard deviation of split frequencies: 0.008008
851000 -- (-4676.179) (-4673.280) [-4668.591] (-4672.091) * (-4678.774) [-4670.817] (-4673.240) (-4667.084) -- 0:02:37
852000 -- (-4673.632) [-4674.856] (-4680.854) (-4670.781) * (-4662.392) (-4677.859) (-4680.030) [-4667.887] -- 0:02:36
853000 -- (-4665.009) (-4666.331) [-4670.150] (-4673.271) * (-4669.671) [-4664.877] (-4680.349) (-4675.425) -- 0:02:35
854000 -- (-4669.999) (-4675.762) [-4673.700] (-4668.276) * (-4675.616) (-4661.883) [-4680.971] (-4677.643) -- 0:02:34
855000 -- (-4675.588) (-4669.429) (-4664.436) [-4663.058] * (-4668.019) (-4673.930) [-4669.021] (-4675.840) -- 0:02:33
Average standard deviation of split frequencies: 0.007875
856000 -- [-4670.757] (-4666.215) (-4668.355) (-4661.187) * (-4680.252) (-4674.885) (-4682.740) [-4666.791] -- 0:02:32
857000 -- (-4669.789) (-4669.874) (-4663.990) [-4669.578] * (-4668.893) [-4663.700] (-4665.216) (-4667.820) -- 0:02:31
858000 -- (-4675.915) (-4666.278) [-4665.810] (-4675.912) * (-4674.498) [-4664.467] (-4680.179) (-4667.381) -- 0:02:30
859000 -- (-4672.706) (-4675.943) (-4661.646) [-4673.977] * [-4666.550] (-4670.579) (-4678.083) (-4670.436) -- 0:02:29
860000 -- [-4674.075] (-4672.776) (-4672.520) (-4672.191) * [-4668.398] (-4669.079) (-4672.108) (-4668.695) -- 0:02:28
Average standard deviation of split frequencies: 0.008243
861000 -- (-4668.689) (-4672.809) [-4670.549] (-4666.943) * (-4674.192) (-4667.454) (-4670.060) [-4668.355] -- 0:02:27
862000 -- (-4669.233) (-4678.458) [-4669.946] (-4669.308) * (-4675.378) [-4664.537] (-4669.644) (-4665.553) -- 0:02:26
863000 -- (-4669.885) (-4677.329) (-4667.656) [-4675.036] * (-4669.558) [-4667.176] (-4677.343) (-4665.745) -- 0:02:25
864000 -- (-4686.353) (-4665.983) [-4672.625] (-4667.192) * [-4669.886] (-4675.686) (-4664.199) (-4672.369) -- 0:02:24
865000 -- (-4669.829) (-4667.630) [-4665.784] (-4671.544) * [-4665.937] (-4672.739) (-4670.277) (-4677.194) -- 0:02:23
Average standard deviation of split frequencies: 0.008410
866000 -- (-4676.467) (-4676.577) [-4668.135] (-4665.838) * (-4669.970) [-4661.967] (-4679.585) (-4662.111) -- 0:02:22
867000 -- (-4667.475) [-4672.391] (-4668.653) (-4664.053) * (-4670.033) (-4674.669) [-4665.119] (-4660.603) -- 0:02:20
868000 -- (-4660.478) [-4668.456] (-4676.786) (-4678.393) * [-4670.234] (-4677.893) (-4675.573) (-4673.477) -- 0:02:19
869000 -- [-4668.549] (-4676.617) (-4675.465) (-4682.072) * (-4681.844) [-4666.392] (-4672.789) (-4671.896) -- 0:02:18
870000 -- (-4678.618) [-4671.426] (-4677.197) (-4680.839) * [-4667.473] (-4665.533) (-4672.462) (-4682.470) -- 0:02:17
Average standard deviation of split frequencies: 0.008555
871000 -- (-4682.890) (-4680.117) [-4677.781] (-4668.195) * (-4680.429) (-4664.272) (-4677.953) [-4664.378] -- 0:02:16
872000 -- (-4669.084) (-4670.426) (-4673.409) [-4663.267] * (-4680.190) (-4669.809) (-4678.120) [-4671.916] -- 0:02:15
873000 -- [-4670.535] (-4669.631) (-4671.630) (-4672.329) * [-4671.655] (-4664.756) (-4665.566) (-4678.172) -- 0:02:14
874000 -- (-4666.142) (-4687.225) [-4671.849] (-4664.774) * (-4669.711) (-4669.266) [-4663.738] (-4658.217) -- 0:02:13
875000 -- (-4671.805) (-4686.753) (-4665.693) [-4671.963] * [-4674.868] (-4671.439) (-4673.346) (-4689.001) -- 0:02:12
Average standard deviation of split frequencies: 0.007937
876000 -- (-4671.352) (-4675.749) [-4672.362] (-4670.806) * (-4664.099) (-4669.266) [-4672.804] (-4671.376) -- 0:02:11
877000 -- (-4669.836) (-4676.766) [-4671.166] (-4673.468) * (-4678.169) (-4669.952) (-4680.800) [-4672.810] -- 0:02:10
878000 -- (-4678.916) [-4675.635] (-4667.270) (-4675.722) * [-4668.849] (-4678.910) (-4678.398) (-4677.973) -- 0:02:09
879000 -- (-4673.643) (-4660.376) [-4666.139] (-4676.079) * (-4672.234) [-4664.262] (-4683.416) (-4676.933) -- 0:02:08
880000 -- (-4664.630) (-4673.040) [-4672.163] (-4667.520) * (-4663.322) (-4667.541) [-4665.741] (-4668.814) -- 0:02:07
Average standard deviation of split frequencies: 0.008136
881000 -- (-4674.293) (-4669.801) [-4670.418] (-4671.450) * (-4672.390) (-4666.976) (-4681.240) [-4671.400] -- 0:02:06
882000 -- [-4671.641] (-4677.155) (-4679.747) (-4677.180) * [-4662.905] (-4675.371) (-4686.848) (-4670.982) -- 0:02:05
883000 -- [-4675.404] (-4681.454) (-4664.671) (-4665.097) * [-4670.120] (-4666.289) (-4681.916) (-4670.724) -- 0:02:04
884000 -- (-4668.984) [-4672.336] (-4683.202) (-4665.564) * (-4670.488) [-4675.824] (-4678.306) (-4675.034) -- 0:02:02
885000 -- (-4666.267) (-4675.312) (-4672.397) [-4668.696] * (-4674.703) [-4670.582] (-4671.960) (-4674.285) -- 0:02:01
Average standard deviation of split frequencies: 0.007741
886000 -- (-4669.277) (-4668.939) (-4682.247) [-4671.104] * [-4670.619] (-4676.695) (-4689.477) (-4674.807) -- 0:02:00
887000 -- (-4662.487) (-4674.535) (-4672.782) [-4669.337] * (-4671.343) [-4673.013] (-4679.491) (-4669.740) -- 0:01:59
888000 -- (-4667.892) [-4671.164] (-4669.556) (-4667.300) * [-4675.635] (-4675.789) (-4675.359) (-4673.343) -- 0:01:58
889000 -- (-4671.854) (-4664.072) [-4677.754] (-4671.106) * (-4678.397) [-4668.157] (-4676.091) (-4672.880) -- 0:01:57
890000 -- [-4669.624] (-4671.218) (-4677.705) (-4671.719) * [-4660.820] (-4668.202) (-4673.094) (-4670.687) -- 0:01:56
Average standard deviation of split frequencies: 0.007727
891000 -- (-4673.383) [-4672.085] (-4675.775) (-4678.194) * (-4662.256) [-4669.182] (-4681.295) (-4688.509) -- 0:01:55
892000 -- (-4678.118) (-4670.567) (-4670.273) [-4663.863] * [-4676.280] (-4677.025) (-4673.448) (-4666.543) -- 0:01:54
893000 -- (-4688.494) (-4671.103) (-4675.203) [-4663.440] * (-4664.880) (-4669.258) (-4670.445) [-4673.042] -- 0:01:53
894000 -- (-4671.751) [-4666.593] (-4674.452) (-4677.992) * (-4664.962) [-4680.035] (-4677.066) (-4658.903) -- 0:01:52
895000 -- (-4675.296) (-4672.393) [-4670.413] (-4669.037) * [-4674.923] (-4670.956) (-4673.417) (-4668.960) -- 0:01:51
Average standard deviation of split frequencies: 0.007287
896000 -- (-4686.918) [-4678.353] (-4670.584) (-4679.501) * (-4667.432) (-4679.442) (-4667.904) [-4671.121] -- 0:01:50
897000 -- (-4674.515) (-4670.351) (-4679.105) [-4672.880] * [-4666.881] (-4672.756) (-4671.012) (-4677.379) -- 0:01:49
898000 -- (-4663.600) (-4669.800) [-4668.764] (-4681.425) * [-4654.670] (-4668.660) (-4666.878) (-4673.162) -- 0:01:48
899000 -- [-4681.451] (-4679.217) (-4667.000) (-4674.502) * [-4666.368] (-4666.928) (-4672.336) (-4672.226) -- 0:01:47
900000 -- [-4665.851] (-4679.850) (-4680.275) (-4672.751) * (-4661.028) (-4673.848) (-4669.214) [-4669.164] -- 0:01:46
Average standard deviation of split frequencies: 0.007328
901000 -- (-4668.172) (-4671.555) [-4668.619] (-4673.876) * (-4665.624) (-4664.436) (-4670.750) [-4662.151] -- 0:01:44
902000 -- (-4684.448) [-4687.954] (-4668.465) (-4672.663) * (-4669.071) [-4669.130] (-4678.141) (-4675.020) -- 0:01:43
903000 -- (-4678.330) (-4681.803) (-4667.008) [-4677.354] * (-4669.854) (-4666.490) (-4686.232) [-4667.587] -- 0:01:42
904000 -- [-4666.494] (-4687.081) (-4671.369) (-4670.091) * [-4666.447] (-4668.486) (-4676.891) (-4667.693) -- 0:01:41
905000 -- (-4670.067) (-4673.308) [-4672.520] (-4673.828) * (-4665.949) (-4670.036) (-4675.569) [-4665.614] -- 0:01:40
Average standard deviation of split frequencies: 0.007440
906000 -- [-4673.197] (-4674.422) (-4668.150) (-4673.812) * (-4675.276) (-4674.261) [-4666.108] (-4657.685) -- 0:01:39
907000 -- (-4673.515) [-4667.125] (-4668.626) (-4674.511) * (-4680.558) (-4668.629) [-4668.029] (-4674.357) -- 0:01:38
908000 -- (-4671.444) [-4667.272] (-4670.502) (-4675.789) * (-4668.504) (-4666.203) (-4675.165) [-4669.273] -- 0:01:37
909000 -- [-4673.765] (-4669.883) (-4675.116) (-4673.120) * (-4685.484) (-4667.038) [-4662.997] (-4671.680) -- 0:01:36
910000 -- (-4666.232) [-4668.009] (-4673.919) (-4688.131) * (-4666.566) (-4674.312) [-4666.796] (-4672.898) -- 0:01:35
Average standard deviation of split frequencies: 0.007454
911000 -- (-4672.672) (-4681.542) (-4683.727) [-4667.886] * (-4657.631) (-4667.695) (-4667.622) [-4663.524] -- 0:01:34
912000 -- (-4663.413) [-4667.983] (-4678.709) (-4670.369) * (-4668.287) (-4673.172) [-4660.246] (-4676.447) -- 0:01:33
913000 -- (-4676.639) (-4686.731) [-4676.579] (-4670.105) * (-4682.786) (-4673.299) (-4667.697) [-4669.404] -- 0:01:32
914000 -- (-4678.627) (-4662.389) [-4669.859] (-4673.879) * (-4681.272) (-4686.343) [-4668.728] (-4679.317) -- 0:01:31
915000 -- (-4664.599) (-4666.966) (-4674.331) [-4668.603] * (-4675.394) (-4673.716) (-4676.256) [-4665.382] -- 0:01:30
Average standard deviation of split frequencies: 0.007488
916000 -- (-4669.354) [-4661.807] (-4685.934) (-4677.403) * [-4663.855] (-4676.217) (-4676.580) (-4675.798) -- 0:01:29
917000 -- [-4681.432] (-4662.311) (-4672.697) (-4673.211) * (-4675.132) (-4674.716) [-4663.390] (-4661.228) -- 0:01:27
918000 -- (-4668.307) (-4676.111) (-4671.907) [-4669.245] * (-4679.494) (-4670.943) [-4662.470] (-4683.002) -- 0:01:26
919000 -- (-4669.509) (-4674.411) [-4666.793] (-4673.845) * (-4666.207) (-4675.934) (-4672.339) [-4669.186] -- 0:01:25
920000 -- (-4668.216) (-4671.961) [-4667.084] (-4664.857) * (-4672.226) (-4670.259) (-4678.756) [-4661.716] -- 0:01:24
Average standard deviation of split frequencies: 0.006938
921000 -- [-4664.401] (-4674.811) (-4667.048) (-4676.366) * [-4657.087] (-4676.755) (-4667.746) (-4681.558) -- 0:01:23
922000 -- [-4666.153] (-4677.614) (-4672.020) (-4667.993) * (-4673.498) (-4672.870) (-4674.392) [-4683.945] -- 0:01:22
923000 -- (-4683.212) (-4680.311) (-4663.784) [-4664.559] * [-4667.856] (-4669.557) (-4675.444) (-4682.369) -- 0:01:21
924000 -- [-4664.863] (-4667.293) (-4671.428) (-4691.141) * (-4671.163) (-4679.769) [-4668.565] (-4662.408) -- 0:01:20
925000 -- (-4672.698) (-4677.604) [-4658.755] (-4683.205) * [-4667.007] (-4669.842) (-4667.972) (-4660.577) -- 0:01:19
Average standard deviation of split frequencies: 0.007102
926000 -- [-4672.920] (-4680.041) (-4667.530) (-4685.246) * [-4664.154] (-4673.244) (-4673.481) (-4694.784) -- 0:01:18
927000 -- (-4674.177) (-4668.687) [-4668.665] (-4674.121) * (-4669.205) [-4681.033] (-4667.991) (-4673.380) -- 0:01:17
928000 -- (-4689.721) (-4669.357) [-4671.790] (-4668.759) * (-4675.165) [-4673.994] (-4681.186) (-4674.456) -- 0:01:16
929000 -- (-4678.985) (-4670.609) [-4670.104] (-4675.848) * (-4672.104) (-4672.755) (-4674.287) [-4668.980] -- 0:01:15
930000 -- (-4670.645) (-4688.943) (-4668.459) [-4674.263] * [-4671.781] (-4675.739) (-4681.706) (-4673.670) -- 0:01:14
Average standard deviation of split frequencies: 0.006914
931000 -- (-4669.722) [-4667.582] (-4672.758) (-4665.451) * [-4666.635] (-4672.887) (-4676.476) (-4676.123) -- 0:01:13
932000 -- (-4677.229) [-4662.187] (-4675.422) (-4690.995) * [-4675.591] (-4670.434) (-4674.761) (-4682.864) -- 0:01:12
933000 -- [-4663.743] (-4675.149) (-4673.047) (-4664.265) * (-4678.913) (-4665.522) (-4678.756) [-4670.777] -- 0:01:11
934000 -- (-4673.351) (-4677.000) [-4668.853] (-4671.477) * (-4677.915) [-4667.223] (-4672.330) (-4679.672) -- 0:01:09
935000 -- [-4671.724] (-4664.958) (-4670.826) (-4667.913) * (-4683.774) (-4678.561) [-4668.539] (-4677.082) -- 0:01:08
Average standard deviation of split frequencies: 0.007252
936000 -- (-4673.182) [-4669.695] (-4678.736) (-4665.799) * (-4675.801) [-4669.564] (-4676.006) (-4676.400) -- 0:01:07
937000 -- (-4669.341) [-4682.113] (-4675.935) (-4667.324) * (-4665.321) (-4678.053) (-4687.312) [-4667.718] -- 0:01:06
938000 -- [-4666.891] (-4664.861) (-4663.129) (-4668.784) * (-4665.069) (-4685.372) [-4669.849] (-4665.558) -- 0:01:05
939000 -- (-4665.153) (-4682.646) (-4677.320) [-4673.671] * [-4666.879] (-4671.944) (-4665.790) (-4666.681) -- 0:01:04
940000 -- (-4671.237) [-4662.902] (-4685.905) (-4671.282) * [-4667.231] (-4684.853) (-4675.565) (-4667.505) -- 0:01:03
Average standard deviation of split frequencies: 0.006815
941000 -- (-4671.619) (-4674.309) (-4674.001) [-4680.321] * [-4667.542] (-4676.565) (-4682.425) (-4666.282) -- 0:01:02
942000 -- [-4673.152] (-4670.592) (-4667.609) (-4670.757) * (-4678.318) (-4664.471) [-4665.926] (-4672.263) -- 0:01:01
943000 -- [-4662.269] (-4690.529) (-4663.127) (-4667.957) * (-4667.672) [-4671.660] (-4675.816) (-4672.588) -- 0:01:00
944000 -- [-4666.893] (-4677.893) (-4670.886) (-4666.984) * (-4672.395) (-4669.329) [-4683.605] (-4674.043) -- 0:00:59
945000 -- (-4672.700) [-4665.929] (-4662.723) (-4680.307) * [-4664.822] (-4673.548) (-4674.112) (-4672.201) -- 0:00:58
Average standard deviation of split frequencies: 0.007226
946000 -- (-4674.209) (-4668.162) [-4668.519] (-4671.879) * (-4676.338) [-4671.904] (-4685.173) (-4680.456) -- 0:00:57
947000 -- (-4670.100) (-4671.612) [-4666.401] (-4671.486) * [-4681.554] (-4670.783) (-4682.503) (-4675.178) -- 0:00:56
948000 -- (-4664.429) (-4677.194) (-4674.841) [-4661.180] * (-4669.251) (-4668.416) [-4677.524] (-4667.315) -- 0:00:55
949000 -- [-4660.467] (-4670.183) (-4675.520) (-4666.583) * [-4666.834] (-4674.628) (-4668.290) (-4674.712) -- 0:00:54
950000 -- [-4669.045] (-4676.721) (-4674.596) (-4676.909) * (-4674.828) (-4675.553) (-4676.152) [-4682.563] -- 0:00:53
Average standard deviation of split frequencies: 0.007537
951000 -- (-4667.452) (-4668.802) (-4679.266) [-4665.404] * (-4670.521) (-4677.853) [-4674.455] (-4675.128) -- 0:00:51
952000 -- (-4670.065) (-4672.222) (-4665.267) [-4670.829] * (-4680.570) [-4672.768] (-4673.674) (-4667.252) -- 0:00:50
953000 -- (-4674.971) [-4661.423] (-4665.522) (-4682.260) * (-4677.564) [-4666.533] (-4675.619) (-4684.476) -- 0:00:49
954000 -- (-4664.914) (-4669.392) [-4662.376] (-4670.745) * [-4670.016] (-4669.689) (-4671.506) (-4680.008) -- 0:00:48
955000 -- (-4687.327) (-4659.235) [-4671.572] (-4666.277) * (-4681.184) (-4678.832) [-4668.956] (-4658.822) -- 0:00:47
Average standard deviation of split frequencies: 0.007150
956000 -- (-4680.897) [-4665.193] (-4666.709) (-4674.522) * (-4669.128) (-4678.714) (-4668.043) [-4666.140] -- 0:00:46
957000 -- (-4679.219) (-4676.823) [-4660.677] (-4671.445) * (-4669.092) (-4687.444) [-4667.404] (-4669.802) -- 0:00:45
958000 -- [-4671.571] (-4680.108) (-4666.660) (-4676.558) * (-4685.422) (-4679.984) [-4668.176] (-4679.234) -- 0:00:44
959000 -- (-4674.000) [-4667.051] (-4670.009) (-4659.956) * (-4679.427) [-4671.143] (-4668.857) (-4677.075) -- 0:00:43
960000 -- (-4672.144) (-4671.740) [-4667.984] (-4676.317) * (-4670.416) [-4666.688] (-4676.685) (-4677.663) -- 0:00:42
Average standard deviation of split frequencies: 0.007164
961000 -- [-4667.823] (-4665.398) (-4670.820) (-4682.165) * [-4668.563] (-4666.374) (-4674.156) (-4664.686) -- 0:00:41
962000 -- (-4676.848) [-4667.958] (-4672.280) (-4679.513) * [-4665.908] (-4672.757) (-4668.908) (-4675.232) -- 0:00:40
963000 -- (-4676.316) (-4670.276) [-4665.664] (-4684.714) * [-4673.012] (-4670.386) (-4681.831) (-4676.842) -- 0:00:39
964000 -- (-4672.485) (-4667.771) (-4674.670) [-4674.112] * (-4665.179) [-4666.732] (-4671.610) (-4665.768) -- 0:00:38
965000 -- (-4662.792) [-4671.918] (-4667.704) (-4670.484) * [-4666.545] (-4675.390) (-4668.382) (-4665.578) -- 0:00:37
Average standard deviation of split frequencies: 0.006759
966000 -- (-4674.003) (-4675.496) [-4661.822] (-4665.267) * (-4675.454) (-4673.665) (-4689.839) [-4661.603] -- 0:00:36
967000 -- (-4680.299) (-4667.949) (-4664.521) [-4666.282] * [-4669.564] (-4669.565) (-4680.114) (-4663.202) -- 0:00:34
968000 -- (-4676.123) [-4671.356] (-4668.901) (-4674.186) * (-4665.783) (-4668.792) (-4665.415) [-4676.003] -- 0:00:33
969000 -- (-4674.023) (-4673.445) [-4669.914] (-4687.338) * (-4665.580) (-4667.721) (-4664.517) [-4672.836] -- 0:00:32
970000 -- (-4679.271) (-4665.873) [-4660.880] (-4676.787) * (-4675.201) (-4666.743) [-4666.848] (-4678.141) -- 0:00:31
Average standard deviation of split frequencies: 0.006945
971000 -- (-4670.729) [-4673.518] (-4662.447) (-4666.069) * (-4676.037) (-4670.203) [-4663.655] (-4678.641) -- 0:00:30
972000 -- (-4678.191) [-4675.371] (-4669.982) (-4672.752) * (-4667.494) (-4673.470) [-4663.779] (-4667.974) -- 0:00:29
973000 -- [-4670.649] (-4671.359) (-4672.719) (-4670.055) * (-4663.552) (-4665.243) (-4673.256) [-4665.596] -- 0:00:28
974000 -- (-4669.247) (-4668.990) [-4673.254] (-4665.831) * (-4673.730) (-4672.241) [-4674.858] (-4672.569) -- 0:00:27
975000 -- [-4659.575] (-4673.744) (-4675.049) (-4671.725) * (-4670.974) (-4674.596) (-4671.145) [-4669.600] -- 0:00:26
Average standard deviation of split frequencies: 0.006762
976000 -- (-4671.846) (-4683.723) (-4676.318) [-4670.202] * (-4675.009) (-4675.150) (-4664.996) [-4663.457] -- 0:00:25
977000 -- [-4663.695] (-4681.021) (-4668.522) (-4671.875) * (-4665.551) (-4670.067) (-4683.219) [-4662.748] -- 0:00:24
978000 -- (-4674.630) (-4670.240) [-4672.205] (-4690.911) * (-4671.400) [-4671.457] (-4679.437) (-4664.872) -- 0:00:23
979000 -- [-4669.104] (-4679.842) (-4674.721) (-4678.281) * (-4688.729) [-4669.937] (-4671.339) (-4673.704) -- 0:00:22
980000 -- [-4670.465] (-4674.940) (-4668.345) (-4668.631) * (-4674.115) [-4665.189] (-4682.016) (-4676.148) -- 0:00:21
Average standard deviation of split frequencies: 0.006778
981000 -- [-4667.613] (-4674.170) (-4673.446) (-4680.566) * [-4685.239] (-4679.565) (-4679.356) (-4671.925) -- 0:00:20
982000 -- (-4673.585) (-4672.111) [-4676.385] (-4675.862) * [-4676.341] (-4676.228) (-4673.887) (-4669.954) -- 0:00:19
983000 -- (-4673.540) (-4675.292) [-4666.984] (-4666.680) * (-4668.861) (-4667.549) (-4671.529) [-4674.788] -- 0:00:18
984000 -- (-4670.253) [-4661.424] (-4681.666) (-4670.482) * (-4677.121) (-4671.660) [-4668.606] (-4680.090) -- 0:00:16
985000 -- (-4678.631) [-4670.386] (-4682.021) (-4672.793) * (-4677.420) (-4676.062) [-4662.700] (-4671.375) -- 0:00:15
Average standard deviation of split frequencies: 0.006932
986000 -- (-4672.955) (-4670.549) [-4671.521] (-4674.363) * [-4677.715] (-4665.983) (-4670.902) (-4679.174) -- 0:00:14
987000 -- (-4676.194) [-4669.186] (-4676.209) (-4668.546) * (-4677.504) (-4666.983) (-4672.583) [-4668.781] -- 0:00:13
988000 -- (-4681.090) [-4671.479] (-4674.056) (-4683.110) * (-4670.458) (-4671.784) [-4668.765] (-4670.369) -- 0:00:12
989000 -- (-4681.010) (-4670.684) (-4666.380) [-4675.493] * (-4675.516) (-4669.204) [-4672.584] (-4676.777) -- 0:00:11
990000 -- (-4673.561) (-4672.813) [-4669.165] (-4672.574) * [-4666.958] (-4683.061) (-4666.099) (-4672.680) -- 0:00:10
Average standard deviation of split frequencies: 0.007043
991000 -- [-4661.839] (-4666.123) (-4674.784) (-4663.878) * [-4666.796] (-4682.120) (-4661.882) (-4672.477) -- 0:00:09
992000 -- (-4672.220) (-4673.503) (-4676.087) [-4670.064] * (-4671.644) (-4681.290) (-4664.326) [-4669.767] -- 0:00:08
993000 -- (-4669.300) [-4683.766] (-4678.939) (-4671.233) * (-4665.039) [-4660.457] (-4666.153) (-4699.354) -- 0:00:07
994000 -- (-4669.730) (-4671.719) [-4671.768] (-4666.287) * (-4667.358) (-4678.603) (-4673.608) [-4666.017] -- 0:00:06
995000 -- (-4669.247) (-4682.597) [-4667.093] (-4680.366) * [-4658.533] (-4664.843) (-4674.031) (-4680.250) -- 0:00:05
Average standard deviation of split frequencies: 0.007194
996000 -- (-4678.226) (-4667.877) (-4669.645) [-4667.785] * (-4661.723) (-4667.782) (-4678.769) [-4666.720] -- 0:00:04
997000 -- (-4664.364) (-4669.192) [-4668.789] (-4670.208) * (-4673.133) (-4677.323) (-4672.721) [-4672.200] -- 0:00:03
998000 -- (-4678.682) [-4667.047] (-4671.813) (-4669.483) * (-4680.494) (-4672.191) [-4662.998] (-4668.831) -- 0:00:02
999000 -- (-4667.512) (-4665.409) (-4669.475) [-4667.758] * [-4671.861] (-4668.625) (-4674.051) (-4668.767) -- 0:00:01
1000000 -- [-4678.321] (-4663.916) (-4673.765) (-4668.219) * (-4671.224) (-4668.369) [-4674.915] (-4666.939) -- 0:00:00
Average standard deviation of split frequencies: 0.007514
Analysis completed in 17 mins 40 seconds
Analysis used 1058.38 seconds of CPU time
Likelihood of best state for "cold" chain of run 1 was -4652.41
Likelihood of best state for "cold" chain of run 2 was -4653.07
Acceptance rates for the moves in the "cold" chain of run 1:
With prob. (last 100) chain accepted proposals by move
32.6 % ( 23 %) Dirichlet(Revmat{all})
52.1 % ( 49 %) Slider(Revmat{all})
19.4 % ( 34 %) Dirichlet(Pi{all})
25.4 % ( 27 %) Slider(Pi{all})
26.3 % ( 27 %) Multiplier(Alpha{1,2})
46.2 % ( 30 %) Multiplier(Alpha{3})
44.3 % ( 31 %) Slider(Pinvar{all})
30.2 % ( 34 %) ExtSPR(Tau{all},V{all})
13.9 % ( 14 %) ExtTBR(Tau{all},V{all})
29.1 % ( 25 %) NNI(Tau{all},V{all})
35.3 % ( 30 %) ParsSPR(Tau{all},V{all})
26.5 % ( 31 %) Multiplier(V{all})
34.3 % ( 35 %) Nodeslider(V{all})
24.9 % ( 32 %) TLMultiplier(V{all})
Acceptance rates for the moves in the "cold" chain of run 2:
With prob. (last 100) chain accepted proposals by move
31.7 % ( 25 %) Dirichlet(Revmat{all})
52.7 % ( 44 %) Slider(Revmat{all})
20.4 % ( 26 %) Dirichlet(Pi{all})
25.5 % ( 26 %) Slider(Pi{all})
26.4 % ( 19 %) Multiplier(Alpha{1,2})
46.4 % ( 25 %) Multiplier(Alpha{3})
44.2 % ( 27 %) Slider(Pinvar{all})
30.2 % ( 26 %) ExtSPR(Tau{all},V{all})
14.2 % ( 13 %) ExtTBR(Tau{all},V{all})
29.0 % ( 32 %) NNI(Tau{all},V{all})
35.1 % ( 27 %) ParsSPR(Tau{all},V{all})
26.5 % ( 21 %) Multiplier(V{all})
34.2 % ( 34 %) Nodeslider(V{all})
24.9 % ( 26 %) TLMultiplier(V{all})
Chain swap information for run 1:
1 2 3 4
----------------------------------
1 | 0.75 0.54 0.38
2 | 167257 0.77 0.57
3 | 166645 166987 0.78
4 | 165938 166514 166659
Chain swap information for run 2:
1 2 3 4
----------------------------------
1 | 0.75 0.54 0.37
2 | 166518 0.77 0.57
3 | 166566 166247 0.78
4 | 166682 167401 166586
Upper diagonal: Proportion of successful state exchanges between chains
Lower diagonal: Number of attempted state exchanges between chains
Chain information:
ID -- Heat
-----------
1 -- 1.00 (cold chain)
2 -- 0.91
3 -- 0.83
4 -- 0.77
Heat = 1 / (1 + T * (ID - 1))
(where T = 0.10 is the temperature and ID is the chain number)
Setting burn-in to 2500
Summarizing parameters in files /data/mrbayes_input.nex.run1.p and /data/mrbayes_input.nex.run2.p
Writing summary statistics to file /data/mrbayes_input.nex.pstat
Using relative burnin ('relburnin=yes'), discarding the first 25 % of samples
Below are rough plots of the generation (x-axis) versus the log
probability of observing the data (y-axis). You can use these
graphs to determine what the burn in for your analysis should be.
When the log probability starts to plateau you may be at station-
arity. Sample trees and parameters after the log probability
plateaus. Of course, this is not a guarantee that you are at sta-
tionarity. Also examine the convergence diagnostics provided by
the 'sump' and 'sumt' commands for all the parameters in your
model. Remember that the burn in is the number of samples to dis-
card. There are a total of ngen / samplefreq samples taken during
a MCMC analysis.
Overlay plot for both runs:
(1 = Run number 1; 2 = Run number 2; * = Both runs)
+------------------------------------------------------------+ -4666.33
| 2 2|
| 2 2 12 |
| 2 1 2 2 2 |
| 1 2 2 11 1 2 |
| 1 222 1 |
| 1 22 2 2 2 2 222 1 2 222 2 |
|21 212 1 * 11 2 11 |
| 1 1 1 2 2 2 1 2 22 1 12 1 |
| 1 1 11 11 1 1 1 1 1 2 11|
| 2 2 1 1 1 22 1 1 2 21 |
|1 2 2 2 2 2 1 1 ** 11 * |
| 1 1 1 * 2 |
| 1 2 1 1 2 |
| |
| 1 |
+------+-----+-----+-----+-----+-----+-----+-----+-----+-----+ -4671.82
^ ^
250000 1000000
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -4661.36 -4683.17
2 -4660.99 -4681.56
--------------------------------------
TOTAL -4661.15 -4682.66
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.264993 0.014786 1.047439 1.506054 1.256013 1146.82 1172.07 1.000
r(A<->C){all} 0.089316 0.000342 0.054197 0.126011 0.088443 1003.16 1022.35 1.000
r(A<->G){all} 0.281720 0.000979 0.221727 0.344311 0.280698 785.83 855.35 1.000
r(A<->T){all} 0.047101 0.000106 0.027708 0.066948 0.046669 1017.93 1051.04 1.000
r(C<->G){all} 0.012941 0.000088 0.000001 0.030723 0.011114 947.80 987.74 1.004
r(C<->T){all} 0.518649 0.001145 0.454678 0.585799 0.518087 691.66 749.04 1.001
r(G<->T){all} 0.050273 0.000105 0.030659 0.069703 0.049599 803.52 935.32 1.000
pi(A){all} 0.262047 0.000109 0.242898 0.283907 0.262121 1138.89 1218.65 1.000
pi(C){all} 0.165678 0.000062 0.148604 0.179710 0.165512 850.77 1066.45 1.001
pi(G){all} 0.194465 0.000088 0.175691 0.212001 0.194331 1038.74 1088.86 1.001
pi(T){all} 0.377809 0.000120 0.355791 0.398486 0.377702 1173.44 1226.53 1.000
alpha{1,2} 0.132752 0.000177 0.106451 0.158016 0.131463 1220.00 1320.32 1.000
alpha{3} 5.401932 2.818308 2.386186 8.588265 5.159255 1296.93 1305.92 1.000
pinvar{all} 0.279501 0.001545 0.198946 0.355116 0.280502 1280.12 1303.44 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
Setting urn-in to 2500
Summarizing trees in files "/data/mrbayes_input.nex.run1.t" and "/data/mrbayes_input.nex.run2.t"
Using relative burnin ('relburnin=yes'), discarding the first 25 % of sampled trees
Writing statistics to files /data/mrbayes_input.nex.<parts|tstat|vstat|trprobs|con>
Examining first file ...
Found one tree block in file "/data/mrbayes_input.nex.run1.t" with 2001 trees in last block
Expecting the same number of trees in the last tree block of all files
Tree reading status:
0 10 20 30 40 50 60 70 80 90 100
v-------v-------v-------v-------v-------v-------v-------v-------v-------v-------v
*********************************************************************************
Read a total of 4002 trees in 2 files (sampling 3002 of them)
(Each file contained 2001 trees of which 1501 were sampled)
General explanation:
In an unrooted tree, a taxon bipartition (split) is specified by removing a
branch, thereby dividing the species into those to the left and those to the
right of the branch. Here, taxa to one side of the removed branch are denoted
'.' and those to the other side are denoted '*'. Specifically, the '.' symbol
is used for the taxa on the same side as the outgroup.
In a rooted or clock tree, the tree is rooted using the model and not by
reference to an outgroup. Each bipartition therefore corresponds to a clade,
that is, a group that includes all the descendants of a particular branch in
the tree. Taxa that are included in each clade are denoted using '*', and
taxa that are not included are denoted using the '.' symbol.
The output first includes a key to all the bipartitions with frequency larger
or equual to (Minpartfreq) in at least one run. Minpartfreq is a parameter to
sumt command and currently it is set to 0.10. This is followed by a table
with statistics for the informative bipartitions (those including at least
two taxa), sorted from highest to lowest probability. For each bipartition,
the table gives the number of times the partition or split was observed in all
runs (#obs) and the posterior probability of the bipartition (Probab.), which
is the same as the split frequency. If several runs are summarized, this is
followed by the minimum split frequency (Min(s)), the maximum frequency
(Max(s)), and the standard deviation of frequencies (Stddev(s)) across runs.
The latter value should approach 0 for all bipartitions as MCMC runs converge.
This is followed by a table summarizing branch lengths, node heights (if a
clock model was used) and relaxed clock parameters (if a relaxed clock model
was used). The mean, variance, and 95 % credible interval are given for each
of these parameters. If several runs are summarized, the potential scale
reduction factor (PSRF) is also given; it should approach 1 as runs converge.
Node heights will take calibration points into account, if such points were
used in the analysis.
Note that Stddev may be unreliable if the partition is not present in all
runs (the last column indicates the number of runs that sampled the partition
if more than one run is summarized). The PSRF is not calculated at all if
the partition is not present in all runs.The PSRF is also sensitive to small
sample sizes and it should only be considered a rough guide to convergence
since some of the assumptions allowing one to interpret it as a true potential
scale reduction factor are violated in MrBayes.
List of taxa in bipartitions:
1 -- C1
2 -- C10
3 -- C11
4 -- C12
5 -- C13
6 -- C2
7 -- C3
8 -- C4
9 -- C5
10 -- C6
11 -- C7
12 -- C8
13 -- C9
Key to taxon bipartitions (saved to file "/data/mrbayes_input.nex.parts"):
ID -- Partition
-------------------
1 -- .************
2 -- .*...........
3 -- ..*..........
4 -- ...*.........
5 -- ....*........
6 -- .....*.......
7 -- ......*......
8 -- .......*.....
9 -- ........*....
10 -- .........*...
11 -- ..........*..
12 -- ...........*.
13 -- ............*
14 -- .****.*.....*
15 -- .****.**.*.**
16 -- ..***........
17 -- .****.*..*.**
18 -- ..***.*......
19 -- .*..........*
20 -- .****.*..*..*
21 -- ..*.*........
22 -- ...**........
23 -- ..**.........
24 -- .****.**.****
25 -- .....*..*....
26 -- .****.*******
27 -- .*********.**
28 -- .*******.****
29 -- ........*.*..
30 -- .****.****.**
31 -- .....*....*..
32 -- .*******.*.**
33 -- .....*..*.*..
-------------------
Summary statistics for informative taxon bipartitions
(saved to file "/data/mrbayes_input.nex.tstat"):
ID #obs Probab. Sd(s)+ Min(s) Max(s) Nruns
----------------------------------------------------------------
14 3002 1.000000 0.000000 1.000000 1.000000 2
15 3002 1.000000 0.000000 1.000000 1.000000 2
16 3002 1.000000 0.000000 1.000000 1.000000 2
17 3002 1.000000 0.000000 1.000000 1.000000 2
18 3002 1.000000 0.000000 1.000000 1.000000 2
19 2884 0.960693 0.003769 0.958028 0.963358 2
20 2883 0.960360 0.007066 0.955363 0.965356 2
21 1278 0.425716 0.008480 0.419720 0.431712 2
22 878 0.292472 0.016017 0.281146 0.303797 2
23 846 0.281812 0.007537 0.276482 0.287142 2
24 727 0.242172 0.011777 0.233844 0.250500 2
25 652 0.217189 0.002827 0.215190 0.219187 2
26 634 0.211193 0.016017 0.199867 0.222518 2
27 609 0.202865 0.015546 0.191872 0.213857 2
28 581 0.193538 0.008009 0.187875 0.199201 2
29 573 0.190873 0.010835 0.183211 0.198534 2
30 572 0.190540 0.010364 0.183211 0.197868 2
31 558 0.185876 0.007537 0.180546 0.191206 2
32 550 0.183211 0.014133 0.173218 0.193205 2
33 548 0.182545 0.010364 0.175217 0.189873 2
----------------------------------------------------------------
+ Convergence diagnostic (standard deviation of split frequencies)
should approach 0.0 as runs converge.
Summary statistics for branch and node parameters
(saved to file "/data/mrbayes_input.nex.vstat"):
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median PSRF+ Nruns
-------------------------------------------------------------------------------------------
length{all}[1] 0.001004 0.000001 0.000001 0.002906 0.000700 1.000 2
length{all}[2] 0.001002 0.000001 0.000000 0.002941 0.000682 1.000 2
length{all}[3] 0.004174 0.000004 0.000624 0.008213 0.003871 1.000 2
length{all}[4] 0.011347 0.000013 0.004809 0.018253 0.011002 1.000 2
length{all}[5] 0.001053 0.000001 0.000001 0.003236 0.000704 1.000 2
length{all}[6] 0.000998 0.000001 0.000001 0.003057 0.000685 1.000 2
length{all}[7] 0.032189 0.000061 0.017406 0.047377 0.031720 1.000 2
length{all}[8] 0.031381 0.000065 0.016585 0.047395 0.030882 1.000 2
length{all}[9] 0.003050 0.000003 0.000362 0.006522 0.002717 1.000 2
length{all}[10] 0.163446 0.001158 0.099900 0.230595 0.160737 1.001 2
length{all}[11] 0.003000 0.000003 0.000185 0.006588 0.002642 1.000 2
length{all}[12] 0.059569 0.000190 0.034442 0.086909 0.058711 1.000 2
length{all}[13] 0.001004 0.000001 0.000000 0.002916 0.000714 1.000 2
length{all}[14] 0.642211 0.008968 0.475824 0.836793 0.636207 1.000 2
length{all}[15] 0.044879 0.000089 0.027276 0.063813 0.044190 1.000 2
length{all}[16] 0.059672 0.000118 0.039251 0.081121 0.058917 1.000 2
length{all}[17] 0.052756 0.000182 0.028782 0.081311 0.051974 1.000 2
length{all}[18] 0.067773 0.000257 0.036584 0.098420 0.067103 1.000 2
length{all}[19] 0.018160 0.000149 0.000001 0.040497 0.016052 1.000 2
length{all}[20] 0.065341 0.000646 0.016192 0.116418 0.064085 1.000 2
length{all}[21] 0.001562 0.000002 0.000001 0.004459 0.001089 1.000 2
length{all}[22] 0.001165 0.000001 0.000001 0.003411 0.000774 0.999 2
length{all}[23] 0.001045 0.000001 0.000000 0.003127 0.000714 1.000 2
length{all}[24] 0.001237 0.000001 0.000003 0.003654 0.000881 0.999 2
length{all}[25] 0.000985 0.000001 0.000001 0.003064 0.000670 0.999 2
length{all}[26] 0.001087 0.000001 0.000001 0.003107 0.000730 1.001 2
length{all}[27] 0.001028 0.000001 0.000001 0.002900 0.000765 0.999 2
length{all}[28] 0.000983 0.000001 0.000000 0.002913 0.000703 0.999 2
length{all}[29] 0.001012 0.000001 0.000000 0.002986 0.000749 1.006 2
length{all}[30] 0.001047 0.000001 0.000003 0.003246 0.000716 0.999 2
length{all}[31] 0.000921 0.000001 0.000001 0.002507 0.000642 1.007 2
length{all}[32] 0.001057 0.000001 0.000001 0.002972 0.000750 0.998 2
length{all}[33] 0.001027 0.000001 0.000003 0.002958 0.000730 0.998 2
-------------------------------------------------------------------------------------------
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge. NA is reported when
deviation of parameter values within all runs is 0 or when a parameter
value (a branch length, for instance) is not sampled in all runs.
Summary statistics for partitions with frequency >= 0.10 in at least one run:
Average standard deviation of split frequencies = 0.007514
Maximum standard deviation of split frequencies = 0.016017
Average PSRF for parameter values (excluding NA and >10.0) = 1.000
Maximum PSRF for parameter values = 1.007
Clade credibility values:
/----------------------------------------------------------------------- C1 (1)
|
|----------------------------------------------------------------------- C2 (6)
|
|----------------------------------------------------------------------- C5 (9)
|
|----------------------------------------------------------------------- C7 (11)
|
| /---------- C10 (2)
| /---------96--------+
| | \---------- C9 (13)
+ |
| | /---------- C11 (3)
| /----100---+ |
| | | /---100---+---------- C12 (4)
| | | | |
| | \---100---+ \---------- C13 (5)
| /----96---+ |
| | | \-------------------- C3 (7)
| | |
| /---100---+ \----------------------------------------- C6 (10)
| | |
\---100---+ \--------------------------------------------------- C8 (12)
|
\------------------------------------------------------------- C4 (8)
Phylogram (based on average branch lengths):
/ C1 (1)
|
| C2 (6)
|
| C5 (9)
|
| C7 (11)
|
| / C10 (2)
| /+
| |\ C9 (13)
+ |
| | / C11 (3)
| /------------------------------------------------+ |
| | | /---+- C12 (4)
| | | | |
| | \----+ \ C13 (5)
| /----+ |
| | | \-- C3 (7)
| | |
| /---+ \------------ C6 (10)
| | |
\--+ \----- C8 (12)
|
\--- C4 (8)
|--------------| 0.200 expected changes per site
Calculating tree probabilities...
Credible sets of trees (183 trees sampled):
50 % credible set contains 20 trees
90 % credible set contains 44 trees
95 % credible set contains 70 trees
99 % credible set contains 153 trees
Exiting mrbayes block
Reached end of file
Tasks completed, exiting program because mode is noninteractive
To return control to the command line after completion of file processing,
set mode to interactive with 'mb -i <filename>' (i is for interactive)
or use 'set mode=interactive'
-- Starting log on Wed Nov 09 22:46:21 GMT 2022 --
-- Iteration: /working_dir/input/2_modified/A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result--
CLUSTAL FORMAT for T-COFFEE Version_12.00.7fb08c2 [http://www.tcoffee.org] [MODE: ], CPU=0.06 sec, SCORE=1000, Nseq=13, Len=496
C1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C2 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C3 SGFFDVIKQLKQIVMLILAFIFIYGLCSVYSVATQSYIESAEGYDYMVIK
C4 SGFFDVLKQLKQLFWCLVFVITICGLCSVYSFATQSYIDSAEGYDYMVIK
C5 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C6 SGFFDVLKQLKQIFWCVVLFITLYGLCSVYSVATQSYIDSADGYEYMVIK
C7 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIK
C8 SGFFDVLKQLKQIFWCLVLFITIYGLCSVYSVATQSYIDSAEGYDYMVIK
C9 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIK
C10 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIK
C11 -GFFDVITQLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIK
C12 -GFFDVITQLKQIVILVFVFIFICGLCSVYSAATQSYIESAEGYDYMVIK
C13 --------QLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIK
****:. :. .* : ******* ******:**:**:*****
C1 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C2 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C3 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
C4 NGVVQSFDDSINCVHNTYKGFTVWFKAKYGFVPTFDKSCPIVLGTVFDLG
C5 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C6 NGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLG
C7 NGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLG
C8 NGVVQPFDDSINCVHNTYKGFAVWFKAKYGFVPTFAKSCPIVLGTAFDLG
C9 NGIVQPFDDTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLE
C10 NGIVQPFDDTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLE
C11 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
C12 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
C13 NGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLE
**:**.***:*.********* *****:**:*** *:****:**.***
C1 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C2 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C3 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGSAVSKDSYFDTC
C4 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C5 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C6 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKSAYFDTC
C7 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTC
C8 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGASVSKNSYFDTC
C9 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C10 NMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C11 NMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C12 NMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
C13 NMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTC
************::*****************:****** :***.:*****
C1 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C2 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C3 VFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C4 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C5 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLLDYYYEHASGNMVKI
C6 VFNSACTTLTGLGGTIVYCAKQGLVEGSKLYSELMPDYFYEHASGNMVKI
C7 VFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKI
C8 VFNSACTTLAGLGGTVVYCAKQGLVEGAKLYSELMPDYYYEHASGNMVKI
C9 VFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C10 VFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C11 VFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C12 VFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
C13 VFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKL
***:*****:*:***:***********:****:*: **:**********:
C1 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C2 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C3 PAIIRGLGLRFVKTQVTTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
C4 PAIIRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C5 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C6 PAIIRGFGLRFVKTQATTYCRVGECIESQAGFCFGGDNWFVYDKEFGDGY
C7 PAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C8 PAIVRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGY
C9 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDKEFGNGY
C10 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDKEFGNGY
C11 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
C12 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
C13 PAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGY
***:*.:********.********* :*:**************:***:**
C1 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C2 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C3 ICGNSILGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C4 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIIIACLAIAVCYGVLKF
C5 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C6 ICGSSTLGFLKNVFALFNSNMSVVATPGAMLVNIIIACFAIAVCYGVLKF
C7 ICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
C8 ICGSSVLGFFKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKF
C9 ICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C10 ICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C11 ICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C12 ICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
C13 ICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
***.* ***:**** ***********.****.**:***:***:*******
C1 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C2 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C3 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C4 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C5 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C6 KKIFGDCTLLVVMIIVTLIVNNVSYFVTQNTFFMIVYAVVYYFTTRKLAY
C7 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C8 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAY
C9 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C10 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C11 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFITRKLAY
C12 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
C13 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAY
********:*:*******:****************:**::*** ******
C1 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C2 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C3 PGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C4 PGILDAGFIIAYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDK
C5 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C6 PGILDAGFIIAYVNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C7 PGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDK
C8 PGILDAGFIIAYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDK
C9 PGVLDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C10 PGVLDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C11 PGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
C12 PGVLDAGFIIAYINMAPWYVITAYVLVFLYDSLPSLFKLKVSTNLFEGDK
C13 PGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDK
**:*********:*******:. *::***************:********
C1 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C2 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C3 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C4 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C5 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C6 FVGSFESAAMGTFVIDMRSYETIVNSTSLDRIKSYANSFNKYKYYTGSMG
C7 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C8 FVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMG
C9 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C10 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C11 FVGNFESAAMGTFVIDMRSYETIVNSTSIARIKSYANSFNKYKYYTGSMG
C12 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
C13 FVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMG
***.******************:****.: ********************
C1 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C2 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C3 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C4 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C5 EADYRMACYAHLGKALMDYSVSRNDILYTPPTVSVNSTLQ------
C6 EADYRMACYAHLGKALMDYSVSRNDILYTPPTISVNSTLQ------
C7 EADYRMACYAHLGKALMDYSVSRNDKLYTPPTVSVNSTLQ------
C8 EADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------
C9 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C10 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C11 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C12 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------
C13 EADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQSGLRKM
*********************.*.* ******:*******
-- Starting log on Thu Nov 10 16:38:54 GMT 2022 --
-- Iteration: /working_dir/pss_subsets/A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result/original_alignment/codeml,A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result.1--
CODONML in paml version 4.9h, March 2018
----------------------------------------------
Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT
TTC | TCC | TAC | TGC
Leu L TTA | TCA | *** * TAA | *** * TGA
TTG | TCG | TAG | Trp W TGG
----------------------------------------------
Leu L CTT | Pro P CCT | His H CAT | Arg R CGT
CTC | CCC | CAC | CGC
CTA | CCA | Gln Q CAA | CGA
CTG | CCG | CAG | CGG
----------------------------------------------
Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT
ATC | ACC | AAC | AGC
ATA | ACA | Lys K AAA | Arg R AGA
Met M ATG | ACG | AAG | AGG
----------------------------------------------
Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT
GTC | GCC | GAC | GGC
GTA | GCA | Glu E GAA | GGA
GTG | GCG | GAG | GGG
----------------------------------------------
Nice code, uuh?
NSsites batch run (ncatG as in YNGP2000): 1 2 7 8
processing fasta file
reading seq# 1 C1 1488 sites
reading seq# 2 C2 1488 sites
reading seq# 3 C3 1488 sites
reading seq# 4 C4 1488 sites
reading seq# 5 C5 1488 sites
reading seq# 6 C6 1488 sites
reading seq# 7 C7 1488 sites
reading seq# 8 C8 1488 sites
reading seq# 9 C9 1488 sites
reading seq#10 C10 1488 sites
reading seq#11 C11 1488 sites
reading seq#12 C12 1488 sites
reading seq#13 C13 1488 sitesns = 13 ls = 1488
Reading sequences, sequential format..
Reading seq # 1: C1
Reading seq # 2: C2
Reading seq # 3: C3
Reading seq # 4: C4
Reading seq # 5: C5
Reading seq # 6: C6
Reading seq # 7: C7
Reading seq # 8: C8
Reading seq # 9: C9
Reading seq #10: C10
Reading seq #11: C11
Reading seq #12: C12
Reading seq #13: C13
Sites with gaps or missing data are removed.
18 ambiguity characters in seq. 1
18 ambiguity characters in seq. 2
18 ambiguity characters in seq. 3
18 ambiguity characters in seq. 4
18 ambiguity characters in seq. 5
18 ambiguity characters in seq. 6
18 ambiguity characters in seq. 7
18 ambiguity characters in seq. 8
18 ambiguity characters in seq. 9
18 ambiguity characters in seq. 10
21 ambiguity characters in seq. 11
21 ambiguity characters in seq. 12
24 ambiguity characters in seq. 13
14 sites are removed. 1 2 3 4 5 6 7 8 491 492 493 494 495 496
Sequences read..
Counting site patterns.. 0:00
Compressing, 333 patterns at 482 / 482 sites (100.0%), 0:00
Collecting fpatt[] & pose[], 333 patterns at 482 / 482 sites (100.0%), 0:00
Counting codons..
624 bytes for distance
325008 bytes for conP
29304 bytes for fhK
5000000 bytes for space
Model 1: NearlyNeutral
TREE # 1
(1, 2, 5, 7, (((((10, 9), ((11, 12, 13), 3)), 6), 8), 4)); MP score: 548
1300032 bytes for conP, adjusted
0.038577 0.100753 0.041084 0.033193 0.017482 0.062878 0.017528 0.067623 0.091101 0.082417 0.060630 0.082916 0.063098 0.068412 0.089048 0.051611 0.024431 0.013283 0.066297 0.107854 0.300000 0.875613 0.575614
ntime & nrate & np: 20 2 23
Bounds (np=23):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.000001
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 1.000000
Qfactor_NS = 10.222363
np = 23
lnL0 = -5706.002145
Iterating by ming2
Initial: fx= 5706.002145
x= 0.03858 0.10075 0.04108 0.03319 0.01748 0.06288 0.01753 0.06762 0.09110 0.08242 0.06063 0.08292 0.06310 0.06841 0.08905 0.05161 0.02443 0.01328 0.06630 0.10785 0.30000 0.87561 0.57561
1 h-m-p 0.0000 0.0001 6299.3184 ++ 5151.835979 m 0.0001 28 | 0/23
2 h-m-p 0.0000 0.0000 1103074.5857 ++ 5145.292402 m 0.0000 54 | 1/23
3 h-m-p 0.0000 0.0000 1514.4959 ++ 5093.356806 m 0.0000 80 | 2/23
4 h-m-p 0.0000 0.0000 37540.5189 ++ 5054.484643 m 0.0000 106 | 3/23
5 h-m-p 0.0000 0.0000 3694.7179 ++ 5002.129088 m 0.0000 132 | 4/23
6 h-m-p 0.0000 0.0000 427794.4215 ++ 4962.565095 m 0.0000 158 | 5/23
7 h-m-p 0.0000 0.0001 960.8242 ++ 4904.832537 m 0.0001 184 | 6/23
8 h-m-p 0.0002 0.0010 452.5792 ++ 4744.493423 m 0.0010 210 | 6/23
9 h-m-p 0.0001 0.0006 1097.3035 +YYYYYYCYCC 4491.402478 10 0.0005 249 | 5/23
10 h-m-p 0.0000 0.0000 3660192.4301 CYC 4487.309858 2 0.0000 278 | 5/23
11 h-m-p 0.0001 0.0004 302.3328 CCCCC 4480.636222 4 0.0001 312 | 5/23
12 h-m-p 0.0011 0.0105 34.6396 CCC 4479.871829 2 0.0010 342 | 5/23
13 h-m-p 0.0004 0.0022 99.3801 CCCC 4478.754698 3 0.0005 374 | 5/23
14 h-m-p 0.0002 0.0012 115.3592 CCCC 4478.110070 3 0.0003 406 | 5/23
15 h-m-p 0.0010 0.0050 30.6392 YCC 4477.859650 2 0.0004 435 | 5/23
16 h-m-p 0.0004 0.0064 34.9102 YC 4477.265763 1 0.0008 462 | 5/23
17 h-m-p 0.0020 0.0126 13.8581 CCCC 4475.305796 3 0.0031 494 | 5/23
18 h-m-p 0.0008 0.0046 52.3309 YCCC 4469.640691 3 0.0019 525 | 5/23
19 h-m-p 0.0008 0.0038 61.6357 CCCCC 4466.375633 4 0.0012 559 | 5/23
20 h-m-p 0.0005 0.0024 78.0624 YCCCC 4464.014347 4 0.0010 592 | 5/23
21 h-m-p 0.0930 0.4650 0.5263 +YYCCYC 4400.366150 5 0.4435 627 | 5/23
22 h-m-p 0.0151 0.0755 0.7026 +YYYYYC 4391.856379 5 0.0591 677 | 5/23
23 h-m-p 0.1956 1.4716 0.2124 +CCCCC 4369.101170 4 0.8534 730 | 5/23
24 h-m-p 0.0600 0.3000 0.8086 YCYCCC 4366.233010 5 0.0368 782 | 5/23
25 h-m-p 0.2015 3.8276 0.1478 +CCCC 4353.445636 3 0.9996 833 | 5/23
26 h-m-p 0.8265 5.6422 0.1787 CYCCC 4345.641548 4 0.9230 884 | 5/23
27 h-m-p 0.3501 1.7505 0.2550 +CYCCC 4324.759829 4 1.4732 936 | 5/23
28 h-m-p 0.3423 1.7116 0.2926 +YCCC 4316.881575 3 0.9268 986 | 5/23
29 h-m-p 0.9354 4.6769 0.2540 CCCC 4307.857235 3 1.3149 1036 | 5/23
30 h-m-p 1.3195 6.5975 0.1819 CCCC 4302.276033 3 2.1268 1086 | 5/23
31 h-m-p 1.0105 5.0524 0.1911 YCCC 4297.283238 3 2.1792 1135 | 5/23
32 h-m-p 1.6000 8.0000 0.1471 +YCCC 4290.869497 3 4.5202 1185 | 5/23
33 h-m-p 0.9850 4.9251 0.1476 YCCCC 4286.499914 4 2.1635 1236 | 5/23
34 h-m-p 1.6000 8.0000 0.0600 CYC 4285.785362 2 1.4742 1283 | 5/23
35 h-m-p 1.0724 8.0000 0.0825 YCCC 4285.307370 3 2.5273 1332 | 5/23
36 h-m-p 1.6000 8.0000 0.0318 CCC 4284.881327 2 2.5820 1380 | 5/23
37 h-m-p 1.6000 8.0000 0.0405 CCC 4284.529492 2 2.0029 1428 | 5/23
38 h-m-p 0.8398 8.0000 0.0966 +YC 4284.185143 1 2.1845 1474 | 5/23
39 h-m-p 1.6000 8.0000 0.0228 YC 4283.769081 1 3.5581 1519 | 5/23
40 h-m-p 1.6000 8.0000 0.0450 YC 4283.133165 1 3.6304 1564 | 5/23
41 h-m-p 1.6000 8.0000 0.0291 +YYC 4280.950343 2 5.8622 1611 | 5/23
42 h-m-p 0.6387 8.0000 0.2669 YCCC 4278.879904 3 1.2665 1660 | 5/23
43 h-m-p 0.8017 4.0084 0.1522 YCCC 4276.339416 3 1.9447 1709 | 5/23
44 h-m-p 1.6000 8.0000 0.0749 YC 4272.433764 1 3.9959 1754 | 5/23
45 h-m-p 1.5403 8.0000 0.1942 YCCC 4267.679952 3 2.7035 1803 | 5/23
46 h-m-p 1.6000 8.0000 0.1998 CCCC 4264.359741 3 2.0336 1853 | 5/23
47 h-m-p 1.4786 7.3928 0.1381 CCC 4263.369656 2 1.7699 1901 | 5/23
48 h-m-p 1.6000 8.0000 0.0939 CCC 4263.104875 2 1.5598 1949 | 5/23
49 h-m-p 1.6000 8.0000 0.0054 C 4263.066087 0 1.6000 1993 | 5/23
50 h-m-p 1.4100 8.0000 0.0061 CC 4263.061501 1 1.8370 2039 | 5/23
51 h-m-p 1.6000 8.0000 0.0011 YC 4263.059515 1 2.5765 2084 | 5/23
52 h-m-p 1.6000 8.0000 0.0010 CC 4263.058503 1 2.3223 2130 | 5/23
53 h-m-p 1.6000 8.0000 0.0010 C 4263.058290 0 1.5613 2174 | 5/23
54 h-m-p 1.6000 8.0000 0.0008 C 4263.058232 0 2.0500 2218 | 5/23
55 h-m-p 1.6000 8.0000 0.0002 ++ 4263.057922 m 8.0000 2262 | 5/23
56 h-m-p 0.7468 8.0000 0.0022 +C 4263.056468 0 2.6937 2307 | 5/23
57 h-m-p 1.6000 8.0000 0.0003 ++ 4263.042632 m 8.0000 2351 | 5/23
58 h-m-p 0.1366 8.0000 0.0202 ++CYC 4262.836698 2 1.7181 2400 | 5/23
59 h-m-p 1.6000 8.0000 0.0149 YC 4262.729255 1 2.9065 2445 | 5/23
60 h-m-p 1.6000 8.0000 0.0039 CC 4262.719888 1 1.3290 2491 | 5/23
61 h-m-p 1.6000 8.0000 0.0008 C 4262.719336 0 1.4889 2535 | 5/23
62 h-m-p 1.6000 8.0000 0.0002 Y 4262.719327 0 1.1237 2579 | 5/23
63 h-m-p 1.6000 8.0000 0.0000 Y 4262.719327 0 1.1228 2623 | 5/23
64 h-m-p 1.6000 8.0000 0.0000 C 4262.719327 0 0.5779 2667 | 5/23
65 h-m-p 1.1274 8.0000 0.0000 C 4262.719327 0 0.2818 2711 | 5/23
66 h-m-p 0.3986 8.0000 0.0000 C 4262.719327 0 0.0996 2755
Out..
lnL = -4262.719327
2756 lfun, 8268 eigenQcodon, 110240 P(t)
end of tree file.
Time used: 1:09
Model 2: PositiveSelection
TREE # 1
(1, 2, 5, 7, (((((10, 9), ((11, 12, 13), 3)), 6), 8), 4)); MP score: 548
0.051652 0.067270 0.058082 0.082871 0.014612 0.054537 0.017747 0.057789 0.017639 0.099627 0.083075 0.099686 0.046836 0.038628 0.034744 0.061329 0.045271 0.030093 0.103141 0.089466 3.474116 1.486149 0.414287 0.111446 1.393395
ntime & nrate & np: 20 3 25
Bounds (np=25):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 -99.000000 -99.000000 0.000001 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000 1.000000 999.000000
Qfactor_NS = 4.759428
np = 25
lnL0 = -5142.361875
Iterating by ming2
Initial: fx= 5142.361875
x= 0.05165 0.06727 0.05808 0.08287 0.01461 0.05454 0.01775 0.05779 0.01764 0.09963 0.08307 0.09969 0.04684 0.03863 0.03474 0.06133 0.04527 0.03009 0.10314 0.08947 3.47412 1.48615 0.41429 0.11145 1.39339
1 h-m-p 0.0000 0.0001 4630.4204 ++ 4526.117680 m 0.0001 30 | 0/25
2 h-m-p 0.0000 0.0000 863008.4227 ++ 4489.826460 m 0.0000 58 | 1/25
3 h-m-p 0.0000 0.0000 915.4858 ++ 4473.337774 m 0.0000 86 | 2/25
4 h-m-p 0.0000 0.0000 1462.1823 ++ 4461.133998 m 0.0000 114 | 3/25
5 h-m-p 0.0000 0.0000 13950.3735 ++ 4445.254402 m 0.0000 142 | 4/25
6 h-m-p 0.0000 0.0000 3584.6313 ++ 4436.920615 m 0.0000 170 | 5/25
7 h-m-p 0.0000 0.0000 1138.0577 +YYYYCC 4431.051479 5 0.0000 205 | 5/25
8 h-m-p 0.0001 0.0010 311.7811 +YCYCCC 4406.703538 5 0.0008 243 | 5/25
9 h-m-p 0.0005 0.0024 283.7959 +CYCC 4355.371565 3 0.0019 277 | 5/25
10 h-m-p 0.0004 0.0019 304.2674 +YCYCCC 4333.701891 5 0.0010 314 | 5/25
11 h-m-p 0.0002 0.0008 471.3785 ++ 4311.226586 m 0.0008 342 | 6/25
12 h-m-p 0.0002 0.0012 768.5149 YYCCC 4301.227664 4 0.0003 376 | 6/25
13 h-m-p 0.0008 0.0040 104.9192 CCCC 4295.997571 3 0.0014 410 | 6/25
14 h-m-p 0.0003 0.0015 124.6723 YCCC 4293.275873 3 0.0006 443 | 6/25
15 h-m-p 0.0006 0.0028 81.9241 CCCCC 4291.085171 4 0.0008 479 | 6/25
16 h-m-p 0.0004 0.0020 77.4051 CCCC 4289.536723 3 0.0007 513 | 6/25
17 h-m-p 0.0010 0.0050 34.2716 CCC 4288.941379 2 0.0010 545 | 6/25
18 h-m-p 0.0026 0.0148 13.5545 YCCC 4288.639669 3 0.0016 578 | 6/25
19 h-m-p 0.0010 0.0135 21.8099 +CYC 4286.001037 2 0.0064 611 | 6/25
20 h-m-p 0.0012 0.0058 21.1407 YCCCC 4285.366080 4 0.0024 646 | 6/25
21 h-m-p 0.0140 1.4036 3.6648 ++CCCCC 4281.080558 4 0.2399 684 | 6/25
22 h-m-p 0.0223 0.1113 9.3563 YCCC 4277.744945 3 0.0558 717 | 6/25
23 h-m-p 0.0763 0.6856 6.8409 YCCC 4273.200022 3 0.1305 750 | 6/25
24 h-m-p 0.5293 3.5034 1.6865 YYCCC 4269.277549 4 0.8757 784 | 6/25
25 h-m-p 1.6000 8.0000 0.1836 CYCC 4267.815783 3 1.1533 817 | 6/25
26 h-m-p 1.6000 8.0000 0.0619 CCC 4267.057438 2 1.8962 868 | 6/25
27 h-m-p 0.8544 8.0000 0.1373 YC 4266.528050 1 1.9502 916 | 6/25
28 h-m-p 1.3571 8.0000 0.1974 CYC 4266.142240 2 1.5670 966 | 6/25
29 h-m-p 1.4303 7.1516 0.1839 YCC 4265.852158 2 1.1662 1016 | 6/25
30 h-m-p 1.6000 8.0000 0.0184 YCCC 4265.443784 3 3.2635 1068 | 6/25
31 h-m-p 0.9223 8.0000 0.0650 +YCC 4264.676818 2 2.8857 1119 | 6/25
32 h-m-p 1.0369 8.0000 0.1809 YCCC 4263.878027 3 2.1357 1171 | 6/25
33 h-m-p 1.2749 8.0000 0.3031 CCC 4263.247574 2 2.1190 1222 | 6/25
34 h-m-p 1.6000 8.0000 0.1734 YCCC 4262.956230 3 1.1498 1274 | 6/25
35 h-m-p 0.7131 8.0000 0.2796 YC 4262.788256 1 1.3058 1322 | 6/25
36 h-m-p 1.6000 8.0000 0.1104 C 4262.731010 0 1.6000 1369 | 6/25
37 h-m-p 1.6000 8.0000 0.0330 C 4262.720936 0 1.6064 1416 | 6/25
38 h-m-p 1.6000 8.0000 0.0133 CC 4262.719489 1 1.3185 1465 | 6/25
39 h-m-p 1.6000 8.0000 0.0008 Y 4262.719336 0 1.0896 1512 | 6/25
40 h-m-p 0.4097 8.0000 0.0021 +Y 4262.719327 0 1.1436 1560 | 6/25
41 h-m-p 1.6000 8.0000 0.0001 Y 4262.719327 0 1.0593 1607 | 6/25
42 h-m-p 1.6000 8.0000 0.0000 Y 4262.719327 0 0.6778 1654 | 6/25
43 h-m-p 1.1876 8.0000 0.0000 C 4262.719327 0 0.2792 1701 | 6/25
44 h-m-p 0.3586 8.0000 0.0000 C 4262.719327 0 0.0930 1748 | 6/25
45 h-m-p 0.1025 8.0000 0.0000 --------------.. | 6/25
46 h-m-p 0.0085 4.2591 0.0068 ------------- | 6/25
47 h-m-p 0.0085 4.2591 0.0068 -------------
Out..
lnL = -4262.719327
1924 lfun, 7696 eigenQcodon, 115440 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 21 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -4291.779435 S = -4151.113293 -151.639611
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 333 patterns 2:21
did 20 / 333 patterns 2:21
did 30 / 333 patterns 2:22
did 40 / 333 patterns 2:22
did 50 / 333 patterns 2:22
did 60 / 333 patterns 2:22
did 70 / 333 patterns 2:22
did 80 / 333 patterns 2:22
did 90 / 333 patterns 2:22
did 100 / 333 patterns 2:22
did 110 / 333 patterns 2:22
did 120 / 333 patterns 2:22
did 130 / 333 patterns 2:22
did 140 / 333 patterns 2:22
did 150 / 333 patterns 2:22
did 160 / 333 patterns 2:22
did 170 / 333 patterns 2:22
did 180 / 333 patterns 2:22
did 190 / 333 patterns 2:22
did 200 / 333 patterns 2:22
did 210 / 333 patterns 2:22
did 220 / 333 patterns 2:22
did 230 / 333 patterns 2:23
did 240 / 333 patterns 2:23
did 250 / 333 patterns 2:23
did 260 / 333 patterns 2:23
did 270 / 333 patterns 2:23
did 280 / 333 patterns 2:23
did 290 / 333 patterns 2:23
did 300 / 333 patterns 2:23
did 310 / 333 patterns 2:23
did 320 / 333 patterns 2:23
did 330 / 333 patterns 2:23
did 333 / 333 patterns 2:23end of tree file.
Time used: 2:23
Model 7: beta
TREE # 1
(1, 2, 5, 7, (((((10, 9), ((11, 12, 13), 3)), 6), 8), 4)); MP score: 548
0.037801 0.086260 0.094690 0.037171 0.058376 0.088697 0.032250 0.025867 0.011243 0.085462 0.085512 0.072723 0.094477 0.051793 0.108335 0.032210 0.030899 0.072078 0.052249 0.100503 3.474117 0.611047 1.611449
ntime & nrate & np: 20 1 23
Bounds (np=23):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.005000 0.005000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 99.000000 99.000000
Qfactor_NS = 6.608557
np = 23
lnL0 = -5092.579972
Iterating by ming2
Initial: fx= 5092.579972
x= 0.03780 0.08626 0.09469 0.03717 0.05838 0.08870 0.03225 0.02587 0.01124 0.08546 0.08551 0.07272 0.09448 0.05179 0.10834 0.03221 0.03090 0.07208 0.05225 0.10050 3.47412 0.61105 1.61145
1 h-m-p 0.0000 0.0001 6371.1807 ++ 4519.534599 m 0.0001 51 | 1/23
2 h-m-p 0.0000 0.0000 1041.0748 ++ 4501.972153 m 0.0000 100 | 2/23
3 h-m-p 0.0000 0.0000 10140.5739 +CYYCYCCC 4431.452286 7 0.0000 161 | 2/23
4 h-m-p 0.0000 0.0000 16540.6402 ++ 4409.823375 m 0.0000 208 | 3/23
5 h-m-p 0.0000 0.0000 3970.9415 ++ 4408.910551 m 0.0000 255 | 4/23
6 h-m-p 0.0000 0.0005 429.6907 ++YCYYYCCC 4360.999493 7 0.0005 314 | 4/23
7 h-m-p 0.0000 0.0000 4458.7832 +CYYYYCCCC 4327.016850 8 0.0000 372 | 4/23
8 h-m-p 0.0000 0.0000 7434.7384 ++ 4316.953550 m 0.0000 417 | 4/23
9 h-m-p 0.0000 0.0002 1110.1159 CYCCC 4309.374338 4 0.0000 469 | 4/23
10 h-m-p 0.0007 0.0036 51.4051 CCC 4308.537476 2 0.0006 518 | 4/23
11 h-m-p 0.0002 0.0016 162.0817 CCC 4307.563702 2 0.0002 567 | 4/23
12 h-m-p 0.0005 0.0027 79.6431 CCC 4306.762194 2 0.0005 616 | 4/23
13 h-m-p 0.0006 0.0042 70.3400 CCC 4306.051294 2 0.0007 665 | 4/23
14 h-m-p 0.0004 0.0112 128.7990 +YCCC 4304.477157 3 0.0009 716 | 4/23
15 h-m-p 0.0006 0.0032 177.5655 CC 4303.069483 1 0.0006 763 | 4/23
16 h-m-p 0.0020 0.0100 42.0913 CCCC 4302.046864 3 0.0021 814 | 4/23
17 h-m-p 0.0009 0.0046 104.1559 YCCC 4299.550365 3 0.0020 864 | 4/23
18 h-m-p 0.0006 0.0032 97.7007 YYC 4298.977572 2 0.0005 911 | 4/23
19 h-m-p 0.0022 0.0112 21.8071 CC 4298.869191 1 0.0006 958 | 4/23
20 h-m-p 0.0014 0.0296 9.4172 YC 4298.643343 1 0.0034 1004 | 4/23
21 h-m-p 0.0027 0.0198 11.8246 ++ 4296.230582 m 0.0198 1049 | 5/23
22 h-m-p 0.3773 3.1766 0.6207 CCC 4293.852507 2 0.6057 1098 | 5/23
23 h-m-p 0.0711 0.3556 1.0185 +YYCCC 4290.492156 4 0.2131 1149 | 5/23
24 h-m-p 1.5740 8.0000 0.1379 +YCCC 4283.367408 3 4.6109 1199 | 5/23
25 h-m-p 1.6000 8.0000 0.0784 +YC 4274.894065 1 4.0358 1245 | 5/23
26 h-m-p 0.6172 3.0860 0.1801 +YYYC 4267.982940 3 2.2815 1293 | 5/23
27 h-m-p 0.8780 4.3898 0.1456 CYC 4266.569648 2 1.1197 1340 | 5/23
28 h-m-p 1.1778 5.8888 0.0850 YCC 4264.977815 2 1.9443 1387 | 5/23
29 h-m-p 1.0686 5.3429 0.0835 CCCC 4264.563830 3 1.5168 1437 | 5/23
30 h-m-p 1.6000 8.0000 0.0657 CYC 4264.255874 2 1.9203 1484 | 5/23
31 h-m-p 1.3927 8.0000 0.0906 CC 4264.082287 1 1.6864 1530 | 5/23
32 h-m-p 1.6000 8.0000 0.0321 CC 4264.044649 1 2.3156 1576 | 5/23
33 h-m-p 1.6000 8.0000 0.0109 CC 4264.036754 1 2.2230 1622 | 5/23
34 h-m-p 1.6000 8.0000 0.0109 +YC 4264.027888 1 5.1617 1668 | 5/23
35 h-m-p 1.6000 8.0000 0.0154 YC 4264.013811 1 3.1122 1713 | 5/23
36 h-m-p 1.6000 8.0000 0.0070 CC 4264.009605 1 2.3127 1759 | 5/23
37 h-m-p 1.6000 8.0000 0.0017 ++ 4263.991881 m 8.0000 1803 | 5/23
38 h-m-p 1.4389 8.0000 0.0095 +YC 4263.951623 1 3.8525 1849 | 5/23
39 h-m-p 1.6000 8.0000 0.0121 +CC 4263.828718 1 5.9184 1896 | 5/23
40 h-m-p 1.3921 8.0000 0.0513 YC 4263.746707 1 2.4437 1941 | 5/23
41 h-m-p 1.6000 8.0000 0.0412 CC 4263.735966 1 1.3008 1987 | 5/23
42 h-m-p 1.6000 8.0000 0.0024 Y 4263.735731 0 1.1889 2031 | 5/23
43 h-m-p 1.6000 8.0000 0.0004 Y 4263.735725 0 1.2159 2075 | 5/23
44 h-m-p 1.6000 8.0000 0.0000 C 4263.735724 0 1.5620 2119 | 5/23
45 h-m-p 1.6000 8.0000 0.0000 Y 4263.735724 0 1.1503 2163 | 5/23
46 h-m-p 1.6000 8.0000 0.0000 Y 4263.735724 0 2.8496 2207 | 5/23
47 h-m-p 1.6000 8.0000 0.0000 --C 4263.735724 0 0.0250 2253 | 5/23
48 h-m-p 0.0268 8.0000 0.0000 --C 4263.735724 0 0.0004 2299
Out..
lnL = -4263.735724
2300 lfun, 25300 eigenQcodon, 460000 P(t)
end of tree file.
Time used: 7:12
Model 8: beta&w>1
TREE # 1
(1, 2, 5, 7, (((((10, 9), ((11, 12, 13), 3)), 6), 8), 4)); MP score: 548
0.023648 0.089104 0.016627 0.048585 0.036596 0.072591 0.012923 0.102035 0.078416 0.033927 0.016871 0.100366 0.080269 0.105758 0.018472 0.042709 0.059895 0.081153 0.051430 0.014261 3.353991 0.900000 0.887115 1.322077 1.300000
ntime & nrate & np: 20 2 25
Bounds (np=25):
0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000010 0.005000 0.005000 1.000000
50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 0.999990 99.000000 99.000000 999.000000
Qfactor_NS = 4.870200
np = 25
lnL0 = -4954.262583
Iterating by ming2
Initial: fx= 4954.262583
x= 0.02365 0.08910 0.01663 0.04858 0.03660 0.07259 0.01292 0.10204 0.07842 0.03393 0.01687 0.10037 0.08027 0.10576 0.01847 0.04271 0.05989 0.08115 0.05143 0.01426 3.35399 0.90000 0.88711 1.32208 1.30000
1 h-m-p 0.0000 0.0000 3307.3791 ++ 4730.911965 m 0.0000 55 | 1/25
2 h-m-p 0.0000 0.0000 1533.9025 ++ 4700.451774 m 0.0000 108 | 2/25
3 h-m-p 0.0000 0.0000 4144.7495 +YCYYYCYCCC 4684.284115 9 0.0000 174 | 2/25
4 h-m-p 0.0000 0.0000 6729.0002 ++ 4679.260123 m 0.0000 225 | 3/25
5 h-m-p 0.0000 0.0000 45016.1679 ++ 4662.606596 m 0.0000 276 | 4/25
6 h-m-p 0.0000 0.0001 858.1120 ++ 4602.584357 m 0.0001 326 | 5/25
7 h-m-p 0.0000 0.0000 642.8388 ++ 4593.952807 m 0.0000 375 | 6/25
8 h-m-p 0.0000 0.0001 2899.9818 +YCYCCC 4562.781863 5 0.0001 433 | 6/25
9 h-m-p 0.0000 0.0000 5913.2187 +YCCCC 4557.455395 4 0.0000 488 | 6/25
10 h-m-p 0.0000 0.0001 2557.3251 +YYYCCC 4539.931145 5 0.0000 543 | 6/25
11 h-m-p 0.0001 0.0004 610.7444 +YYYYCCC 4513.937778 6 0.0003 599 | 6/25
12 h-m-p 0.0000 0.0001 2657.2519 +YYCCCC 4479.328323 5 0.0001 655 | 6/25
13 h-m-p 0.0001 0.0004 387.2859 CCC 4476.743133 2 0.0001 706 | 6/25
14 h-m-p 0.0000 0.0000 3403.6798 YC 4476.719144 1 0.0000 754 | 6/25
15 h-m-p 0.0000 0.0008 275.8796 ++CCCC 4471.258362 3 0.0003 809 | 5/25
16 h-m-p 0.0000 0.0001 1836.6326 YCYCCC 4469.906453 5 0.0000 864 | 5/25
17 h-m-p 0.0001 0.0011 363.3782 +CCCC 4462.738680 3 0.0003 919 | 5/25
18 h-m-p 0.0003 0.0026 357.0975 YCCC 4450.738339 3 0.0008 972 | 5/25
19 h-m-p 0.0003 0.0013 267.3783 YCCC 4445.754781 3 0.0005 1025 | 5/25
20 h-m-p 0.0002 0.0010 72.2711 ++ 4441.530023 m 0.0010 1073 | 5/25
21 h-m-p -0.0000 -0.0000 362.9014
h-m-p: -0.00000000e+00 -0.00000000e+00 3.62901401e+02 4441.530023
.. | 5/25
22 h-m-p 0.0000 0.0006 79085.2798 -YCYCCC 4432.791856 5 0.0000 1176 | 5/25
23 h-m-p 0.0000 0.0001 4038.6743 YYYCCCCC 4410.005479 7 0.0000 1235 | 5/25
24 h-m-p 0.0000 0.0000 1069.9048 +CYCYYCCC 4378.099799 7 0.0000 1295 | 5/25
25 h-m-p 0.0000 0.0000 8712.7167 +YYYCYCCC 4363.324527 7 0.0000 1354 | 5/25
26 h-m-p 0.0000 0.0000 15279.2561 +YCYC 4325.291047 3 0.0000 1407 | 5/25
27 h-m-p 0.0001 0.0003 341.4617 ++ 4305.447139 m 0.0003 1455 | 5/25
28 h-m-p 0.0000 0.0000 1087.3616 ++ 4299.994584 m 0.0000 1503 | 5/25
29 h-m-p 0.0001 0.0008 248.1880 +YCYC 4293.234870 3 0.0004 1556 | 5/25
30 h-m-p 0.0002 0.0012 155.2527 YCCC 4289.946953 3 0.0004 1609 | 5/25
31 h-m-p 0.0007 0.0035 29.3349 YC 4289.748158 1 0.0005 1658 | 5/25
32 h-m-p 0.0008 0.0119 18.4505 C 4289.644006 0 0.0008 1706 | 5/25
33 h-m-p 0.0020 0.0435 7.3088 CC 4289.591221 1 0.0018 1756 | 5/25
34 h-m-p 0.0007 0.0234 18.9910 CC 4289.524178 1 0.0010 1806 | 5/25
35 h-m-p 0.0007 0.0332 27.9657 +CYC 4289.266412 2 0.0025 1858 | 5/25
36 h-m-p 0.0006 0.0346 109.8133 +YCCC 4287.403243 3 0.0046 1912 | 5/25
37 h-m-p 0.0009 0.0046 238.6868 YCC 4286.839373 2 0.0007 1963 | 5/25
38 h-m-p 0.0046 0.0231 11.0455 YC 4286.815472 1 0.0006 2012 | 5/25
39 h-m-p 0.0014 0.2564 4.7621 ++YCCC 4285.764569 3 0.0539 2067 | 5/25
40 h-m-p 0.0004 0.0020 482.3330 ++ 4279.810442 m 0.0020 2115 | 6/25
41 h-m-p 0.6986 5.4867 1.3628 YCCC 4271.533721 3 1.6804 2168 | 6/25
42 h-m-p 1.0592 5.2959 0.8761 CYCCC 4265.350564 4 1.4201 2222 | 6/25
43 h-m-p 0.8016 4.0078 0.4384 YCCC 4261.947088 3 1.9629 2274 | 6/25
44 h-m-p 0.6337 3.1686 0.1083 YCCCC 4261.080616 4 1.2210 2328 | 6/25
45 h-m-p 0.5997 8.0000 0.2205 YC 4260.812059 1 1.1348 2376 | 6/25
46 h-m-p 1.6000 8.0000 0.0371 YCC 4260.723439 2 1.3105 2426 | 6/25
47 h-m-p 1.6000 8.0000 0.0191 CC 4260.694350 1 2.4207 2475 | 6/25
48 h-m-p 0.4842 8.0000 0.0953 +YC 4260.628382 1 4.5110 2524 | 6/25
49 h-m-p 1.6000 8.0000 0.1292 +YC 4260.518456 1 4.6853 2573 | 6/25
50 h-m-p 1.6000 8.0000 0.1187 YC 4260.428142 1 2.9535 2621 | 6/25
51 h-m-p 1.5315 8.0000 0.2290 +YC 4260.287142 1 4.0828 2670 | 6/25
52 h-m-p 1.6000 8.0000 0.3041 YCCC 4260.140512 3 3.1725 2722 | 6/25
53 h-m-p 1.6000 8.0000 0.1328 CCC 4260.056746 2 1.9839 2773 | 6/25
54 h-m-p 1.2977 8.0000 0.2031 CC 4260.034387 1 1.7450 2822 | 6/25
55 h-m-p 1.6000 8.0000 0.0735 CC 4260.018997 1 2.0599 2871 | 6/25
56 h-m-p 1.5610 8.0000 0.0970 CC 4260.014691 1 1.3347 2920 | 6/25
57 h-m-p 1.6000 8.0000 0.0168 C 4260.014333 0 1.3729 2967 | 6/25
58 h-m-p 1.6000 8.0000 0.0048 ++ 4260.013811 m 8.0000 3014 | 6/25
59 h-m-p 0.5177 8.0000 0.0745 +C 4260.012744 0 2.2882 3062 | 6/25
60 h-m-p 1.6000 8.0000 0.0346 YC 4260.012048 1 2.8306 3110 | 6/25
61 h-m-p 1.6000 8.0000 0.0392 ++ 4260.009470 m 8.0000 3157 | 6/25
62 h-m-p 1.6000 8.0000 0.1897 C 4260.008044 0 1.4544 3204 | 6/25
63 h-m-p 1.6000 8.0000 0.0067 C 4260.007768 0 1.6075 3251 | 6/25
64 h-m-p 0.7033 8.0000 0.0153 Y 4260.007727 0 1.5404 3298 | 6/25
65 h-m-p 1.6000 8.0000 0.0023 Y 4260.007726 0 1.0270 3345 | 6/25
66 h-m-p 1.6000 8.0000 0.0005 Y 4260.007726 0 0.9213 3392 | 6/25
67 h-m-p 1.6000 8.0000 0.0000 -C 4260.007726 0 0.1000 3440 | 6/25
68 h-m-p 0.0642 8.0000 0.0000 +C 4260.007726 0 0.2566 3488 | 6/25
69 h-m-p 0.2429 8.0000 0.0000 Y 4260.007726 0 0.0607 3535 | 6/25
70 h-m-p 1.1155 8.0000 0.0000 ----Y 4260.007726 0 0.0011 3586
Out..
lnL = -4260.007726
3587 lfun, 43044 eigenQcodon, 789140 P(t)
BEBing (dim = 4). This may take several minutes.
Calculating f(x_h|w): 10 categories 20 w sets.
Calculating f(X), the marginal likelihood.
log(fX) = -4309.582336 S = -4153.431163 -169.337159
Calculating f(w|X), posterior probabilities of site classes.
did 10 / 333 patterns 15:29
did 20 / 333 patterns 15:30
did 30 / 333 patterns 15:30
did 40 / 333 patterns 15:30
did 50 / 333 patterns 15:30
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did 90 / 333 patterns 15:31
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did 120 / 333 patterns 15:32
did 130 / 333 patterns 15:32
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did 300 / 333 patterns 15:35
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did 320 / 333 patterns 15:35
did 330 / 333 patterns 15:36
did 333 / 333 patterns 15:36end of tree file.
Time used: 15:36
The loglikelihoods for models M1, M2, M7 and M8 are -4262.719327 -4262.719327 -4263.735724 -4260.007726 respectively
The loglikelihood for model M8 is significantly different from that for M7. Twice the difference is 7.455996
CLUSTAL W (1.8) multiple sequence alignment (ALTER 1.3.3)
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQSFDDS
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQSFDDS
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 SGFFDVIKQLKQIVMLILAFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDT
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVFVITICGLCSVYSFATQSYIDSAEGYDYMVIKNGVVQSFDDS
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQSFDDS
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 SGFFDVLKQLKQIFWCVVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFDDS
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQSFDDS
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 SGFFDVLKQLKQIFWCLVLFITIYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQPFDDS
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDT
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDT
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 -GFFDVITQLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDT
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 -GFFDVITQLKQIVILVFVFIFICGLCSVYSAATQSYIESAEGYDYMVIKNGIVQPFDDT
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 --------QLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDT
****:. :. .* : ******* ******:**:**:*******:**.***:
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 INCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLV
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 INCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLV
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 ISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVALVGRSLV
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 INCVHNTYKGFTVWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLV
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 INCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLV
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 INCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLV
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 INCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLV
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 INCVHNTYKGFAVWFKAKYGFVPTFAKSCPIVLGTAFDLGNMRPIPDVPAYVALVGRSLV
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 ISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLENMRPIPDVPAYVALVGRSLV
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 ISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLENMRPIPDVPAYVALVGRSLV
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 ISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVSIVGRSLV
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 ISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVSIVGRSLV
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 ISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVSIVGRSLV
*.********* *****:**:*** *:****:**.*** ************::******
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 FAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKL
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 FAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKL
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 FAINAAFGVTNMCYDHTGSAVSKDSYFDTCVFNAACTTLTGLGGTIVYCAKQGLVEGAKL
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 FAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKL
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 FAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKL
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 FAINAAFGVTNVCYDHTGSAVSKSAYFDTCVFNSACTTLTGLGGTIVYCAKQGLVEGSKL
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 FAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKL
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 FAINAAFGVTNVCYDHTGASVSKNSYFDTCVFNSACTTLAGLGGTVVYCAKQGLVEGAKL
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 FAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNAACTTLTGLGGTIVYCAKQGLVEGAKL
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 FAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNAACTTLTGLGGTIVYCAKQGLVEGAKL
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 FAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNTACTTLTGLGGTIVYCAKQGLVEGAKL
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 FAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNTACTTLTGLGGTIVYCAKQGLVEGAKL
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 FAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNTACTTLTGLGGTIVYCAKQGLVEGAKL
***********:****** :***.:********:*****:*:***:***********:**
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 YSELLPDYYYEHASGNMVKIPAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWF
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 YSELLPDYYYEHASGNMVKIPAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWF
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 YSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQVTTYCRVGECIDSKAGFCFGGDNWF
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 YSELLPDYYYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWF
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 YSELLLDYYYEHASGNMVKIPAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWF
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 YSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECIESQAGFCFGGDNWF
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 YSELLPDYYYEHASGNMVKIPAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWF
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 YSELMPDYYYEHASGNMVKIPAIVRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWF
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 YSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWF
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 YSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWF
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 YSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWF
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 YSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWF
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 YSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWF
**:*: **:**********:***:*.:********.********* :*:***********
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 VYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 VYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 VYDNEFGNGYICGNSILGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 VYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIIIACLAIAVCYGVLKF
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 VYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 VYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATPGAMLVNIIIACFAIAVCYGVLKF
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 VYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKF
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 VYDKEFGDGYICGSSVLGFFKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKF
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 VYDKEFGNGYICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 VYDKEFGNGYICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 VYDNEFGNGYICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 VYDNEFGNGYICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 VYDNEFGNGYICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKF
***:***:*****.* ***:**** ***********.****.**:***:***:*******
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGVLDAGFII
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGVLDAGFII
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGILDAGFII
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGILDAGFII
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGVLDAGFII
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 KKIFGDCTLLVVMIIVTLIVNNVSYFVTQNTFFMIVYAVVYYFTTRKLAYPGILDAGFII
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGVLDAGFII
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 KKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGILDAGFII
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGVLDAGFII
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 KKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGVLDAGFII
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFITRKLAYPGILDAGFII
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGVLDAGFII
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 KKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGILDAGFII
********:*:*******:****************:**::*** ********:*******
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 AYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSY
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 AYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSY
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 AYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSY
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 AYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSY
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 AYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSY
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 AYVNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSY
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 AYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSY
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 AYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSY
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 AYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSY
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 AYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSY
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 AYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSY
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 AYINMAPWYVITAYVLVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSY
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 AYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSY
**:*******:. *::***************:***********.****************
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 ETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDMLYTP
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 ETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDMLYTP
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 ETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTP
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 ETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDMLYTP
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 ETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDILYTP
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 ETIVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDILYTP
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 ETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDKLYTP
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 ETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDMLYTP
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 ETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTP
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 ETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTP
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 ETIVNSTSIARIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTP
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 ETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTP
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 ETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTP
**:****.: *****************************************.*.* ****
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 PTVSVNSTLQ------
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 PTVSVNSTLQ------
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 PTVSVNSTLQ------
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 PTVSVNSTLQ------
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 PTVSVNSTLQ------
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 PTISVNSTLQ------
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 PTVSVNSTLQ------
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 PTVSVNSTLQ------
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 PTVSVNSTLQ------
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 PTVSVNSTLQ------
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 PTVSVNSTLQ------
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 PTVSVNSTLQ------
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 PTVSVNSTLQSGLRKM
**:*******
>171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 TCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAACTCTTCTGGTGTCTTGTTTTGTTCATTACCCTTTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGAGGGTTATGATTACATGGTTATTAAGAACGGTGTTGTTCAATCATTTGATGATTCTATTAACTGTGTACATAATACATACAAAGGCTTTGCAGTGTGGTTTAAAGCTAAACATGGTTTTGTACCTACATTTGACAAGTCCTGCCCTATTGTTTTAGGAACTGTTTTTGATTTAGGTAATATGAGACCAATCCCTGATGTGCCTGCGTATGTAGCACTTGTTGGTAGATCCTTAGTGTTCGCAATCAATGCTGCATTTGGCGTTACTAATGTGTGCTATGATCATACTGGTGCCGCTGTAAGTAAGAATTCTTACTTTGACACTTGTGTCTTCAATTCTGCGTGCACTACTCTAACTGGCATTGGTGGTACAGTCGTTTATTGTGCTAAGCAAGGACTTGTTGAGGGTGCTAAGCTTTACAGTGAATTGCTGCCTGATTATTATTATGAGCATGCTAGTGGTAACATGGTAAAAATACCAGCCATTATTAGGAGTTTTGGTCTACGGTTTGTAAAAACACAGGCTACAACTTATTGCAGAGTGGGAGAGTGTACTGAAAGTCAAGCTGGTTTTTGCTTCGGTGGCGACAACTGGTTTGTCTATGATAAAGAGTTTGGAGATGGTTACATTTGTGGAAGTTCCACATTGGGATTCTTCAAAAATGTGTTCGCACTCTTTAATTCTAATATGTCTGTAGTAGCTACATCTGGTGCAATGTTGGCTAACATTGTTATTGCATGCTTAGCTATTGCAGTCTGTTATGGTGTTCTTAAGTTTAAAAAGATCTTTGGTGATTGCACTCTCTTAGTAGTTATGATTATTGTTACATTGGTTGTTAATAATGTTTCATACTTTGTAACCCAAAACACATTCTTTATGATTGTTTATGCTATCATCTATTATTTCACAACAAGAAAACTTGCATACCCAGGTGTTTTAGATGCGGGGTTCATTATCGCATACTTGAATATGGCCCCATGGTATGTTCTTGTTTTGTATATAATGGTGTTCCTTTATGATTCCCTACCATCACTATTCAAACTTAAAGTAACAACAAACCTCTTTGAAGGTGATAAATTTGTAGGTAGTTTCGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAAACACTTGTTAATTCTACATCTCTAGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTATAAGTACTATACTGGTTCGATGGGAGAGGCTGATTACCGCATGGCTTGCTACGCTCATTTGGGTAAGGCGTTAATGGATTATTCTGTTTCAAGAAATGATATGCTTTATACGCCACCAACGGTCAGTGTCAATTCAACACTGCAG------------------ >79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 TCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAACTCTTCTGGTGTCTTGTTTTGTTCATTACCCTTTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGAGGGTTATGATTACATGGTTATTAAGAACGGTGTTGTTCAATCATTTGATGATTCTATTAACTGTGTACATAATACATACAAAGGCTTTGCAGTGTGGTTTAAAGCTAAACATGGTTTTGTACCTACATTTGACAAGTCCTGCCCTATTGTTTTAGGAACTGTTTTTGATTTAGGTAATATGAGACCAATCCCTGATGTGCCTGCGTATGTAGCACTTGTTGGTAGATCCTTAGTGTTCGCAATCAATGCTGCATTTGGCGTTACTAATGTGTGCTATGATCATACTGGTGCCGCTGTAAGTAAGAATTCTTACTTTGACACTTGTGTCTTCAATTCTGCGTGCACTACTCTAACTGGCATTGGTGGTACAGTCGTTTATTGTGCTAAGCAAGGACTTGTTGAGGGTGCTAAGCTTTACAGTGAATTGCTGCCTGATTATTATTATGAGCATGCTAGTGGTAACATGGTAAAAATACCAGCCATTATTAGGAGTTTTGGTCTACGGTTTGTAAAAACACAGGCTACAACTTATTGCAGAGTGGGAGAGTGTACTGAAAGTCAAGCTGGTTTTTGCTTCGGTGGCGACAACTGGTTTGTCTATGATAAAGAGTTTGGAGATGGTTACATTTGTGGAAGTTCCACATTGGGATTCTTCAAAAATGTGTTCGCACTCTTTAATTCTAATATGTCTGTAGTAGCTACATCTGGTGCAATGTTGGCTAACATTGTTATTGCATGCTTAGCTATTGCAGTCTGTTATGGTGTTCTTAAGTTTAAAAAGATCTTTGGTGATTGCACTCTCTTAGTAGTTATGATTATTGTTACATTGGTTGTTAATAATGTTTCATACTTTGTAACCCAAAACACATTCTTTATGATTGTTTATGCTATCATCTATTATTTCACAACAAGAAAACTTGCATACCCAGGTGTTTTAGATGCGGGGTTCATTATCGCATACTTGAATATGGCCCCATGGTATGTTCTTGTTTTGTATATAATGGTGTTCCTTTATGATTCCCTACCATCACTATTCAAACTTAAAGTAACAACAAACCTCTTTGAAGGTGATAAATTTGTAGGTAGTTTCGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAAACACTTGTTAATTCTACATCTCTAGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTATAAGTACTATACTGGTTCGATGGGAGAGGCTGATTACCGCATGGCTTGCTACGCTCATTTGGGTAAGGCGTTAATGGATTATTCTGTTTCAAGAAATGATATGCTTTATACGCCACCAACGGTCAGTGTCAATTCAACACTGCAG------------------ >A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 TCAGGCTTTTTCGATGTAATCAAACAGCTTAAACAAATTGTGATGTTGATTCTTGCTTTTATCTTTATATATGGTTTGTGCTCGGTCTACAGTGTTGCTACACAGTCCTACATTGAATCTGCTGAAGGCTATGACTACATGGTTATTAAGAATGGAATTGTTCAACCTTTTGACGATACCATTTCATGTGTTCATAACACTTACAAAGGATTTGGTGACTGGTTTAAAGCTAAGTATGGTTTTATCCCTACTTTTGGTAAATCATGCCCAATTGTTGTAGGAACTGTCTTTGATCTTGAAAATATGAGACCAATTCCTGACGTACCTGCATATGTTGCTCTTGTGGGTAGGTCTCTTGTTTTTGCTATTAATGCTGCTTTTGGTGTTACTAACATGTGCTATGATCATACTGGCAGTGCAGTGAGTAAGGATTCTTACTTCGACACTTGTGTGTTTAATGCTGCATGCACCACTCTTACGGGTCTTGGTGGTACAATTGTATATTGTGCAAAGCAAGGTTTAGTTGAAGGTGCTAAGCTCTATAGTGATCTTATGCCAGACTATTATTATGAGCATGCTAGTGGTAACATGGTTAAATTGCCAGCAATTATTAGAGGACTTGGTCTACGATTTGTGAAAACACAGGTTACAACTTACTGTAGAGTGGGAGAGTGCATTGATAGTAAAGCTGGTTTTTGCTTTGGTGGCGATAACTGGTTTGTCTACGATAATGAGTTTGGCAACGGATATATCTGTGGTAATTCTATTCTAGGATTCTTTAAGAATGTCTTCAAACTCTTTAACTCTAACATGTCTGTGGTAGCTACATCAGGTGCTATGCTTGTCAACATTATTATTGCATGCCTAGCTATTGCAATGTGTTATGGTGTTCTTAAGTTTAAGAAAATCTTTGGTGACTGCACTCTTCTCATTGTTATGATCATTGTTACACTCGTTGTAAACAATGTGTCTTATTTTGTCACTCAAAACACATTCTTTATGATTATCTATGCCATTGTCTACTACTTTACAACAAGGAAACTCGCATACCCAGGCATTCTTGATGCTGGATTTATTATTGCTTACATTAACATGGCTCCATGGTATGTGATTACCGCATACATTCTAGTTTTCCTTTATGACTCACTCCCTTCACTGTTCAAACTCAAGGTTTCAACAAATCTTTTTGAAGGTGATAAATTTGTGGGTAACTTTGAATCTGCTGCTATGGGTACTTTTGTTATTGATATGCGTTCATATGAGACTATTGTTAATTCTACTCCTATTGATAGAATTAAATCATATGCTAACAGCTTCAATAAATATAAGTATTACACAGGTTCAATGGGAGAAGCTGACTACAGAATGGCTTGCTATGCTCATCTTGGTAAAGCTCTTATGGATTATTCTGTTAATAGAACAGATATGCTTTACACACCTCCTACTGTTAGTGTTAATTCTACACTTCAG------------------ >Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 TCAGGTTTCTTTGATGTACTCAAACAGCTTAAACAACTTTTCTGGTGTCTCGTTTTTGTCATTACTATTTGTGGTCTATGCTCAGTCTACAGTTTTGCAACTCAGTCTTATATTGATTCTGCTGAGGGTTATGATTACATGGTTATTAAGAACGGTGTTGTTCAATCATTTGATGATTCTATTAACTGTGTACATAATACATACAAAGGCTTTACAGTGTGGTTTAAAGCTAAATATGGTTTTGTACCTACATTTGACAAGTCCTGCCCTATTGTTTTAGGAACTGTTTTTGATTTAGGTAATATGAGACCAATCCCTGATGTGCCAGCGTATGTAGCACTTGTTGGTAGATCCTTAGTGTTCGCAATCAATGCTGCATTTGGCGTTACTAATGTGTGCTATGATCATACGGGCGCCGCTGTAAGTAAGAATTCTTACTTTGACACTTGTGTCTTCAATTCTGCGTGCACTACTCTAACTGGCATTGGTGGTACAGTCGTTTATTGTGCCAAGCAAGGACTTGTTGAGGGTGCTAAGCTTTATAGTGAATTGTTACCTGATTATTATTATGAGCACGCTAGTGGTAACATGGTAAAAATACCAGCCATTATTAGGGGTTTTGGTCTACGGTTTGTAAAAACACAGGCTACAACCTATTGCAGAGTGGGAGAGTGTACTGAAAGTCAAGCTGGTTTTTGCTTTGGTGGTGACAACTGGTTTGTCTATGACAAAGAGTTTGGAGATGGTTACATTTGTGGAAGCTCCACACTGGGATTCTTCAAAAATGTGTTCGCACTCTTTAATTCTAACATGTCTGTAGTAGCCACATCTGGTGCAATGTTGGCTAACATTATTATTGCATGTCTGGCTATTGCAGTCTGTTATGGTGTTCTTAAGTTTAAAAAGATCTTTGGTGATTGCACTCTCCTAGTAGTTATGATTATTGTTACATTGGTTGTTAATAATGTTTCCTACTTTGTAACCCAAAACACATTCTTTATGATTGTTTATGCTATTATCTATTATTTCACAACAAGAAAACTCGCATACCCAGGTATTTTAGATGCGGGGTTCATTATTGCATACTTGAATATGGCTCCGTGGTATGTTCTTGTTTTGTATGTAATGGTATTCCTATATGATTCCCTACCATCACTATTCAAACTTAAGGTAACAACAAACCTCTTTGAAGGTGATAAATTTGTGGGTAGTTTTGAATCAGCAGCTATGGGTACTTTTGTTATAGACATGCGTTCATATGAAACACTCGTTAATTCTACATCCTTAGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTACAAGTACTATACTGGTTCAATGGGAGAGGCTGATTACCGCATGGCTTGTTATGCTCATTTGGGTAAGGCATTAATGGATTATTCTGTTTCAAGAAATGACATGCTTTACACGCCACCGACGGTCAGTGTTAACTCAACACTACAG------------------ >DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 TCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAACTCTTCTGGTGTCTTGTTTTGTTCATTACCCTTTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGAGGGTTATGATTACATGGTTATTAAGAACGGTGTTGTTCAATCATTTGATGATTCTATTAACTGTGTACATAATACATACAAAGGCTTTGCAGTGTGGTTTAAAGCTAAACATGGTTTTGTACCTACATTTGACAAGTCCTGCCCTATTGTTTTAGGAACTGTTTTTGATTTAGGTAATATGAGACCAATCCCTGATGTGCCTGCGTATGTAGCACTTGTTGGTAGATCCTTAGTGTTCGCAATCAATGCTGCATTTGGCGTTACTAATGTGTGCTATGATCATACTGGTGCCGCTGTAAGTAAGAATTCTTACTTTGACACTTGTGTCTTCAATTCTGCGTGCACTACTCTAACTGGCATTGGTGGTACAGTCGTTTATTGTGCTAAGCAAGGACTTGTTGAGGGTGCTAAGCTTTACAGTGAATTGCTGCTTGATTATTATTATGAGCATGCTAGTGGTAACATGGTAAAAATACCAGCCATTATTAGGAGTTTTGGTCTACGGTTTGTAAAAACACAGGCTACAACTTATTGCAGAGTGGGAGAGTGTACTGAAAGTCAAGCTGGTTTTTGCTTCGGTGGCGACAACTGGTTTGTCTATGATAAAGAGTTTGGAGATGGTTACATTTGTGGAAGTTCCACATTGGGATTCTTCAAAAATGTGTTCGCACTCTTTAATTCTAATATGTCTGTAGTAGCTACATCTGGTGCAATGTTGGCTAACATTGTTATTGCATGCTTAGCTATTGCAGTCTGTTATGGTGTTCTTAAGTTTAAAAAGATCTTTGGTGATTGCACTCTCTTAGTAGTTATGATTATTGTTACATTGGTTGTTAATAATGTTTCATACTTTGTAACCCAAAACACATTCTTTATGATTGTTTATGCTATCATCTATTATTTCACAACAAGAAAACTTGCATACCCAGGTGTTTTAGATGCGGGGTTCATTATCGCATACTTGAATATGGCCCCATGGTATGTTCTTGTTTTGTATATAATGGTGTTCCTTTATGATTCCCTACCATCACTATTCAAACTTAAAGTAACAACAAACCTCTTTGAAGGTGATAAATTTGTAGGTAGTTTCGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAAACACTTGTTAATTCTACATCTCTAGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTATAAGTACTATACTGGTTCGATGGGAGAGGCTGATTACCGCATGGCTTGCTACGCTCATTTGGGTAAGGCGTTAATGGATTATTCTGTTTCAAGAAATGATATTCTTTATACGCCACCAACGGTCAGTGTCAATTCAACACTGCAG------------------ >FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 TCAGGCTTCTTTGATGTACTTAAACAGCTTAAACAAATCTTCTGGTGTGTGGTTTTGTTTATCACTTTGTATGGTTTATGCTCAGTCTACAGTGTTGCTACTCAGTCTTATATTGATTCTGCTGATGGTTATGAATACATGGTTATTAAGAATGGCATTGTTCAACCATTTGATGATTCTATTAACTGTGTACACAACACATACAAAGGCTTTGTGATGTGGTTTAAAGCTAAATATGGTTTTGTACCCACATTCGACAAATCCTGCCCTATTGTCTTAGGAACTGTTTTCGATTTGGGTAATATGAGACCAATCCCTGACGTGCCAGCCTACGTAGCACTTGTTGGTAGATCCCTAGTGTTTGCGATTAACGCAGCATTTGGCGTTACTAATGTGTGTTATGATCATACAGGTTCTGCCGTGAGTAAAAGTGCTTATTTTGATACATGTGTATTTAATTCGGCTTGCACTACTTTAACAGGCCTTGGTGGTACAATTGTTTATTGTGCCAAACAAGGACTTGTGGAGGGTTCTAAACTTTACAGCGAATTGATGCCTGATTACTTTTATGAGCACGCTAGTGGCAATATGGTTAAAATACCAGCCATTATTAGGGGTTTTGGTTTGAGATTTGTAAAAACACAGGCTACAACATACTGCAGAGTAGGAGAGTGTATTGAAAGTCAAGCTGGTTTTTGCTTCGGTGGTGACAACTGGTTTGTTTATGATAAGGAGTTTGGTGATGGTTACATTTGCGGGAGCTCTACATTAGGTTTTCTCAAAAATGTCTTCGCCCTCTTTAATTCTAACATGTCTGTAGTAGCTACACCTGGTGCAATGTTGGTTAACATTATCATCGCATGTTTTGCTATTGCAGTCTGCTATGGTGTTCTTAAATTTAAGAAGATCTTTGGTGATTGCACTCTCCTAGTTGTTATGATTATTGTTACACTGATTGTTAATAACGTTTCTTATTTTGTGACCCAAAACACATTCTTTATGATTGTTTATGCCGTTGTCTATTATTTTACAACAAGAAAATTAGCATACCCTGGTATCTTAGATGCCGGTTTTATTATTGCCTATGTGAACATGGCTCCATGGTATGTGCTTGTGTTGTACATAATGGTCTTCTTATATGATTCTCTACCCTCACTATTCAAACTTAAGGTTACAACTAACCTTTTTGAAGGTGATAAATTTGTTGGTAGTTTTGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAAACAATTGTTAATTCTACATCTTTGGATAGAATTAAGTCATATGCTAATAGCTTTAACAAGTACAAGTACTATACTGGTTCAATGGGAGAGGCTGATTACCGCATGGCTTGTTATGCTCATTTAGGTAAAGCGCTTATGGACTATTCTGTTTCAAGAAATGACATACTTTACACACCGCCAACGATCAGTGTTAATTCAACACTGCAA------------------ >FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 TCAGGTTTCTTTGATGTACTTAAACAGCTTAAACAACTCTTCTGGTGTCTTGTTTTGTTCATTACCCTTTATGGTTTATGCTCAGTCTACAGTGTTGCAACTCAGTCTTATATTGATTCTGCTGAGGGTTATGATTACATGGTTATTAAGAACGGTGTTGTTCAATCATTTGATGATTCTATTAACTGTGTACATAATACATACAAAGGCTTTGCAGTGTGGTTTAAAGCTAAACATGGTTTTGTACCTACATTTGACAAGTCCTGCCCTATTGTTTTAGGAACTGTTTTTGATTTAGGTAATATGAGACCAATCCCTGATGTGCCTGCGTATGTAGCACTTGTTGGTAGATCCTTAGTGTTCGCAATCAATGCTGCATTTGGCGTTACTAATGTGTGCTATGATCATACTGGTGCCGCTGTAAGTAAGAATTCTTACTTTGACACTTGTGTCTTCAATTCTGCGTGCACTACTCTAACTGGCATTGGTGGTACAGTCGTTTATTGTGCTAAGCAAGGACTTGTTGAGGGTGCTAAGCTTTACAGTGAATTGCTGCCTGATTATTATTATGAGCATGCTAGTGGTAACATGGTAAAAATACCAGCCATTATTAGGAGTTTTGGTCTACGGTTTGTAAAAACACAGGCTACAACTTATTGCAGAGTGGGAGAGTGTACTGAAAGTCAAGCTGGTTTTTGCTTCGGTGGCGACAACTGGTTTGTCTATGATAAAGAGTTTGGAGATGGTTACATTTGTGGAAGTTCCACATTGGGATTCTTCAAAAATGTGTTCGCACTCTTTAATTCTAATATGTCTGTAGTAGCTACATCTGGTGCAATGTTGGCTAACATTGTTATTGCATGCTTAGCTATTGCAGTCTGTTATGGTGTTCTTAAGTTTAAAAAGATCTTTGGTGATTGCACTCTCTTAGTAGTTATGATTATTGTTACATTGGTTGTTAATAATGTTTCATACTTTGTAACCCAAAACACATTCTTTATGATTGTTTATGCTATCATCTATTATTTCACAACAAGAAAACTTGCATACCCAGGTGTTTTAGATGCGGGGTTCATTATCGCATACTTGAATATGGCCCCATGGTATGTTCTTGTTTTGTATATAATGGTGTTCCTTTATGATTCCCTACCATCACTATTCAAACTTAAAGTAACAACAAACCTCTTTGAAGGTGATAAATTTGTAGGTAGTTTCGAATCAGCAGCTATGGGTACTTTTGTTATAGATATGCGTTCATATGAAACACTTGTTAATTCTACATCTCTAGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTATAAGTACTATACTGGTTCGATGGGAGAGGCTGATTACCGCATGGCTTGCTACGCTCATTTAGGTAAGGCGTTAATGGATTATTCTGTTTCAAGAAATGATAAGCTTTATACGCCACCAACGGTCAGTGTCAATTCAACACTGCAG------------------ >Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 TCAGGCTTCTTTGATGTACTTAAGCAGCTTAAACAAATCTTTTGGTGTTTGGTTTTGTTCATTACAATTTACGGTCTATGTTCAGTCTACAGTGTTGCAACTCAATCTTATATTGATTCCGCTGAGGGTTATGATTACATGGTTATTAAGAACGGTGTTGTTCAACCATTTGATGATTCTATTAACTGTGTACATAATACATACAAAGGCTTTGCAGTGTGGTTTAAAGCTAAATACGGCTTTGTACCTACATTTGCTAAGTCCTGTCCTATTGTATTGGGAACTGCTTTTGATCTAGGTAATATGAGACCAATCCCTGATGTGCCAGCATATGTAGCACTTGTTGGTAGATCCTTAGTCTTCGCAATCAATGCTGCATTTGGTGTTACCAATGTGTGTTATGATCATACAGGTGCTTCTGTAAGTAAGAATTCTTACTTTGACACTTGTGTCTTCAATTCTGCATGCACTACTCTGGCCGGCCTTGGTGGTACAGTCGTTTATTGTGCTAAGCAAGGACTTGTTGAGGGTGCTAAACTTTACAGCGAATTGATGCCTGATTATTATTATGAGCACGCTAGTGGTAACATGGTTAAAATACCAGCAATTGTTAGGGGTTTTGGTCTGCGGTTTGTAAAAACACAGGCAACAACTTATTGCAGAGTCGGAGAGTGTACTGAAAGTCAAGCTGGTTTTTGCTTTGGTGGTGACAACTGGTTTGTCTATGATAAAGAGTTTGGAGATGGTTACATTTGTGGAAGTTCTGTATTGGGCTTCTTCAAGAATGTGTTCGCACTCTTTAACTCTAACATGTCTGTAGTAGCCACATCTGGTGCAATGTTGGTTAACATTATTATCGCATGTTTGGCTATTGCAGTCTGTTATGGTGTTCTTAAGTTTAAAAAGATCTTTGGTGATTGCACTCTCTTAGTTGTTATGATTATTGTTACATTGGTTGTTAACAATGTTTCTTACTTTGTGACCCAAAACACATTCTTTATGATTGTTTATGCCATCATTTATTATTTCACAACAAGAAAGCTTGCATACCCTGGTATCTTAGATGCTGGTTTCATTATTGCATATTTGAATATGGCTCCATGGTATGTTCTTGTTTTGTACGTAATGGTATTCCTCTACGACTCTCTACCATCACTATTCAAACTTAAGGTAACAACAAACCTTTTTGAAGGTGATAAATTTGTGGGTAGTTTTGAATCAGCAGCTATGGGTACTTTTGTTATAGACATGCGTTCATATGAAACACTTGTTAATTCTACATCTTTAGATAGAATTAAGTCATATGCTAACAGCTTTAACAAGTACAAGTACTATACTGGTTCAATGGGAGAGGCTGATTACCGCATGGCTTGTTATGCTCATTTAGGTAAGGCATTAATGGATTACTCTGTCTCAAGAAATGACATGCTCTACACACCTCCAACAGTCAGTGTCAACTCAACACTGCAG------------------ >K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 TCAGGCTTTTTCGATGTACTCAAACAGCTTAAACAAATTGTGATGTTAGTTCTTGGTTTCATCTTTATCTATGGTTTGTGCTCTGTCTACAGTGTTGCTACACAGTCCTACATTGAATCTGCTGAAGGTTATGACTACATGGTTATTAAGAATGGAATTGTTCAACCTTTTGACGACACCATTTCATGTGTTCATAACACTTACAAAGGATTTGGTGAATGGTTTAAAGCTAAGTACGGTTTTATCCCTACTTTTGCCAAAGCATGCCCAATTGTTGTAGGAACTGTTTTTGATCTTGAAAACATGAGACCAATTCCTGATGTGCCTGCATATGTAGCTCTTGTTGGTAGATCTCTTGTTTTTGCTATTAATGCTGCTTTTGGTGTTACTAATATGTGCTATGATCATACTGGCAATGCAGTGAGTAAGGATTCTTACTTCGACACTTGTGTGTTTAATGCTGCATGCACCACTCTTACAGGTCTTGGTGGTACAATTGTTTATTGTGCAAAACAAGGTCTAGTTGAAGGTGCTAAGCTCTATAGTGATCTTATGCCTGACTATTATTATGAGCACGCTAGTGGTAACATGGTTAAATTGCCAGCAATTATTAGAGGACTTGGTCTACGGTTTGTAAAAACACAGGCTACGACTTACTGTAGAGTAGGAGAGTGTATTGACAGCAAAGCTGGTTTTTGCTTTGGTGGTGATAACTGGTTTGTCTATGACAAAGAGTTTGGTAATGGGTACATTTGTGGTAATTCTGTTTTAGGATTCCTTAAGAATGTCTTCAGACTCTTTAACTCTAACATGTCTGTGGTAGCCACATCAGGTGCGATGCTTGTTAACATTATCATTGCTTGCCTGGCTATTGCAATGTGTTATGGTGTTCTTAAATTTAAGAAAATATTTGGTGACTGCACTCTTCTGATTGTTATGATTATTGTTACACTTGTTGTAAACAATGTGTCTTATTTTGTCACTCAAAACACATTCTTTATGATTATTTATGCCATTGTTTATTACTTTACAACTAGGAAGCTTGCATACCCAGGCGTCCTTGATGCTGGGTTTATTATTGCTTACATTAACATGGCTCCATGGTATGTGATTACTGCATACATCTTAGTGTTCCTCTATGACTCACTTCCTTCACTGTTCAAACTTAAGGTTTCAACAAACCTTTTTGAAGGTGACAAATTTGTGGGTAACTTTGAATCTGCCGCTATGGGTACTTTTGTTATTGATATGCGTTCATATGAAACTATTGTTAATTCTACTCCTATTGATAGAATTAAATCATATGCTAACAGCTTCAATAAATATAAGTACTACACAGGTTCAATGGGAGAGGCTGACTACAGAATGGCTTGCTATGCTCATCTTGGTAAAGCTCTTATGGACTATTCTGTTAACAGAACAGACATGCTTTACACACCTCCTACTGTTAGTGTTAATTCCACACTTCAG------------------ >S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 TCAGGCTTTTTCGATGTACTCAAACAGCTTAAACAAATTGTGATGTTAGTTCTTGGTTTCATCTTTATCTATGGTTTGTGCTCTGTCTACAGTGTTGCTACACAGTCCTACATTGAATCTGCTGAAGGTTATGACTACATGGTTATTAAGAATGGAATTGTTCAACCTTTTGACGACACCATTTCATGTGTTCATAACACTTACAAAGGATTTGGTGAATGGTTTAAAGCTAAGTACGGTTTTATCCCTACTTTTGCCAAAGCATGCCCAATTGTTGTAGGAACTGTTTTTGATCTTGAAAACATGAGACCAATTCCTGATGTGCCTGCATATGTAGCTCTTGTTGGTAGATCTCTTGTTTTTGCTATTAATGCTGCTTTTGGTGTTACTAATATGTGCTATGATCATACTGGCAATGCAGTGAGTAAGGATTCTTACTTCGACACTTGTGTGTTTAATGCTGCATGCACCACTCTTACAGGTCTTGGTGGTACAATTGTTTATTGTGCAAAACAAGGTCTAGTTGAAGGTGCTAAGCTCTATAGTGATCTTATGCCTGACTATTATTATGAGCACGCTAGTGGTAACATGGTTAAATTGCCAGCAATTATTAGAGGACTTGGTCTACGGTTTGTAAAAACACAGGCTACGACTTACTGTAGAGTAGGAGAGTGTATTGACAGCAAAGCTGGTTTTTGCTTTGGTGGTGATAACTGGTTTGTCTATGACAAAGAGTTTGGTAATGGGTACATTTGTGGTAATTCTGTTTTAGGATTCCTTAAGAATGTCTTCAGACTCTTTAACTCTAACATGTCTGTGGTAGCCACATCAGGTGCGATGCTTGTTAACATTATCATTGCTTGCCTGGCTATTGCAATGTGTTATGGTGTTCTTAAATTTAAGAAAATATTTGGTGACTGCACTCTTCTGATTGTTATGATTATTGTTACACTTGTTGTAAACAATGTGTCTTATTTTGTCACTCAAAACACATTCTTTATGATTATTTATGCCATTGTTTATTACTTTACAACTAGGAAGCTTGCATACCCAGGCGTCCTTGATGCTGGGTTTATTATTGCTTACATTAACATGGCTCCATGGTATGTGATTACTGCATACATCTTAGTGTTCCTCTATGACTCACTTCCTTCACTGTTCAAACTTAAGGTTTCAACAAACCTTTTTGAAGGTGACAAATTTGTGGGTAACTTTGAATCTGCCGCTATGGGTACTTTTGTTATTGATATGCGTTCATATGAAACTATTGTTAATTCTACTCCTATTGATAGAATTAAATCATATGCTAACAGCTTCAATAAATATAAGTACTACACAGGTTCAATGGGAGAGGCTGACTACAGAATGGCTTGCTATGCTCATCTTGGTAAAGCTCTTATGGACTATTCTGTTAACAGAACAGACATGCTTTACACACCTCCTACTGTTAGTGTTAATTCCACACTTCAG------------------ >UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 ---GGCTTTTTCGATGTAATTACACAGCTTAAACAAATTGTGATTTTGGTTTTTGTTTTTATCTTTATTTGTGGTTTGTGCTCTGTTTACAGTGTTGCTACACAGTCCTACATTGAATCTGCTGAAGGCTATGACTACATGGTTATTAAGAATGGAATTGTTCAACCTTTTGACGATACCATTTCATGTGTTCATAACACTTATAAAGGATTCGGTGACTGGTTTAAAGCTAAGTATGGTTTTATCCCTACTTTTGGTAAATCATGTCCAATTGTTGTAGGAACTGTTTTTGATCTTGAAAATATGAGACCAATTCCTGACGTGCCTGCATATGTTTCTATTGTGGGTAGATCTCTTGTTTTCGCTATTAATGCTGCTTTTGGTGTTACTAATATGTGCTATGATCATACTGGCAATGCAGTTAGTAAGGACTCTTACTTTGATACTTGTGTGTTTAATACTGCGTGCACCACTCTTACAGGTCTTGGTGGTACAATTGTATATTGTGCAAAGCAAGGTTTAGTTGAAGGTGCTAAGCTCTATAGTGATCTTATGCCAGACTATTATTATGAGCATGCTAGTGGTAACATGGTTAAATTGCCAGCAATTATTAGAGGACTTGGTCTACGTTTTGTGAAAACACAGGCTACAACTTATTGTAGAGTGGGAGAGTGCATTGATAGTAAAGCTGGTTTTTGCTTTGGTGGCGATAACTGGTTTGTCTACGACAATGAGTTTGGCAATGGATACATCTGTGGTAATTCTGTGCTAGGATTCTTTAAGAATGTCTTCAAACTCTTTAACTCTAACATGTCTGTGGTAGCTACATCTGGTGCGATGCTTGTTAACATTATTATTGCATGCTTAGCTATTGCAATGTGTTATGGTGTTCTTAAGTTTAAGAAGATTTTTGGTGATTGTACTTTCCTCATTGTTATGATCATTGTCACCCTTGTTGTGAACAATGTGTCTTATTTTGTCACTCAAAACACGTTCTTTATGATCATCTACGCCATTGTTTACTATTTTATAACAAGAAAACTTGCATACCCAGGCATTCTTGATGCTGGGTTTATTATTGCTTATATTAATATGGCTCCATGGTACGTGATTACCGCATATATCCTAGTTTTCCTCTATGACTCACTCCCTTCACTGTTTAAACTTAAAGTTTCAACAAATCTTTTTGAAGGTGATAAATTTGTGGGTAACTTTGAATCTGCTGCTATGGGTACTTTTGTTATTGACATGCGTTCATATGAAACTATTGTTAATTCTACTTCTATTGCTAGAATTAAATCATATGCTAACAGCTTCAATAAATATAAGTACTACACAGGTTCAATGGGAGAAGCTGACTACAGAATGGCTTGCTATGCTCATCTTGGTAAAGCTCTTATGGACTATTCTGTTAATAGAACAGACATGCTTTACACACCTCCTACTGTTAGTGTTAATTCTACACTTCAG------------------ >partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 ---GGCTTTTTCGATGTAATTACACAGCTTAAACAAATTGTGATTTTGGTTTTTGTTTTTATTTTTATTTGTGGTTTATGCTCTGTTTACAGTGCTGCTACACAGTCCTACATTGAATCTGCTGAAGGCTATGACTACATGGTTATTAAGAATGGAATTGTTCAACCTTTTGACGATACCATTTCATGTGTTCATAACACTTATAAAGGATTCGGTGACTGGTTTAAAGCTAAGTATGGTTTTATCCCTACTTTTGGTAAATCATGTCCAATTGTTGTAGGAACTGTTTTTGATCTTGAAAATATGAGACCAATTCCTGACGTGCCTGCATATGTTTCTATTGTGGGTAGATCTCTTGTTTTCGCTATTAATGCTGCTTTTGGTGTTACTAATATGTGCTATGATCATACTGGCAATGCAGTTAGTAAGGACTCTTACTTTGATACTTGTGTGTTTAATACTGCGTGCACCACTCTTACAGGTCTTGGTGGTACAATTGTATATTGTGCAAAGCAAGGTTTAGTTGAAGGTGCTAAGCTCTATAGTGATCTTATGCCAGACTATTATTATGAGCATGCTAGTGGTAACATGGTTAAATTGCCAGCAATTATTAGAGGACTTGGTCTACGTTTTGTGAAAACACAGGCTACAACTTATTGTAGAGTGGGAGAGTGCATTGATAGTAAAGCTGGTTTTTGCTTTGGTGGCGATAACTGGTTTGTTTACGACAATGAGTTTGGCAATGGATACATCTGTGGTAATTCTGTGCTAGGATTCTTTAAGAATGTCTTCAAACTCTTTAACTCTAACATGTCTGTGGTAGCTACATCTGGTGCGATGCTTGTTAACATTATTATTGCATGCTTAGCTATTGCAATGTGTTATGGTGTTCTTAAGTTTAAGAAGATTTTTGGTGATTGTACTTTCCTCATTGTTATGATCATTGTCACTCTTGTTGTGAACAATGTGTCTTATTTTGTCACTCAAAACACGTTCTTTATGATCATCTACGCCATTGTTTACTATTTTACAACAAGAAAACTTGCATACCCAGGCGTTCTTGATGCTGGGTTTATTATTGCTTATATTAATATGGCTCCATGGTACGTGATTACCGCATATGTCCTAGTTTTCCTCTATGACTCACTCCCTTCACTGTTTAAACTTAAAGTTTCAACAAATCTTTTTGAAGGTGACAAATTCGTGGGTAACTTTGAATCTGCTGCTATGGGTACTTTTGTTATTGACATGCGTTCATATGAAACTATTGTTAATTCTACTCCTATTGATAGAATTAAATCATATGCTAACAGCTTCAATAAATATAAGTACTACACAGGTTCAATGGGAGAAGCTGACTACAGAATGGCTTGCTATGCTCATCTTGGTAAAGCTCTTATGGACTATTCTGTTAATAGAACAGACATGCTTTACACACCTCCTACTGTTAGTGTTAATTCCACACTTCAG------------------ >virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 ------------------------CAGCTTAAACAAATTGTGATTTTGGTTTTTGTTTTTATCTTTATTTGTGGTTTGTGCTCTGTTTACAGTGTTGCTACACAGTCCTACATTGAATCTGCTGAAGGCTATGACTACATGGTTATTAAGAATGGAATTGTTCAACCTTTTGACGATACCATTTCATGTGTTCATAACACTTATAAAGGATTCGGTGACTGGTTTAAAGCTAAGTATGGTTTTATCCCTACTTTTGGTAAATCATGTCCAATTGTTGTAGGAACTGTTTTTGATCTTGAAAATATGAGACCAATTCCTGACGTGCCTGCATATGTTTCTATTGTGGGTAGATCTCTTGTTTTCGCTATTAATGCTGCTTTTGGTGTTACTAATATGTGCTATGATCATACTGGCAATGCAGTTAGTAAGGACTCTTACTTTGATACTTGTGTGTTTAATACTGCGTGCACCACTCTTACAGGTCTTGGTGGTACAATTGTATATTGTGCAAAGCAAGGTTTAGTTGAAGGTGCTAAGCTCTATAGTGATCTTATGCCAGACTATTATTATGAGCATGCTAGTGGTAACATGGTTAAATTGCCAGCAATTATTAGAGGACTTGGTCTACGTTTTGTGAAAACACAGGCTACAACTTATTGTAGAGTGGGAGAGTGCATTGATAGTAAAGCTGGTTTTTGCTTTGGTGGCGATAACTGGTTTGTCTACGACAATGAGTTTGGCAATGGATACATCTGTGGTAATTCTGTGCTAGGATTCTTTAAGAATGTCTTCAAACTCTTTAACTCTAACATGTCTGTGGTAGCTACATCTGGTGCGATGCTTGTTAACATTATTATTGCATGCTTAGCTATTGCAATGTGTTATGGTGTTCTTAAGTTTAAGAAGATTTTTGGTGATTGTACTTTCCTCATTGTTATGATCATTGTCACCCTTGTTGTGAACAATGTGTCTTATTTTGTCACTCAAAACACGTTCTTTATGATCATCTACGCCATTGTTTACTATTTTACAACAAGAAAACTTGCATACCCAGGCATTCTTGATGCTGGGTTTATTATTGCTTATATTAATATGGCTCCATGGTACGTGATTACCGCATATATCCTAGTTTTCCTCTATGACTCACTCCCTTCACTGTTTAAACTTAAAGTTTCAACAAATCTTTTTGAAGGTGATAAATTTGTGGGTAACTTTGAATCTGCTGCTATGGGTACTTTTGTTATTGACATGCGTTCATATGAAACTATTGTTAATTCTACTCCTATTGATAGAATTAAATCATATGCTAACAGCTTCAATAAATATAAGTACTACACAGGTTCAATGGGAGAAGCTGACTACAGAATGGCTTGCTATGCTCATCTTGGTAAAGCTCTTATGGACTATTCTGTTAATAGAACAGACATGCTTTACACACCTCCTACTGTTAGTGTTAATTCTACACTTCAGTCAGGTTTGCGGAAAATG
>171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKIPAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------ >79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKIPAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------ >A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1 SGFFDVIKQLKQIVMLILAFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGSAVSKDSYFDTCVFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQVTTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGYICGNSILGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKFKKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------ >Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVFVITICGLCSVYSFATQSYIDSAEGYDYMVIKNGVVQSFDDSINCVHNTYKGFTVWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIIIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGILDAGFIIAYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------ >DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLLDYYYEHASGNMVKIPAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDILYTPPTVSVNSTLQ------ >FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1 SGFFDVLKQLKQIFWCVVLFITLYGLCSVYSVATQSYIDSADGYEYMVIKNGIVQPFDDSINCVHNTYKGFVMWFKAKYGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGSAVSKSAYFDTCVFNSACTTLTGLGGTIVYCAKQGLVEGSKLYSELMPDYFYEHASGNMVKIPAIIRGFGLRFVKTQATTYCRVGECIESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFLKNVFALFNSNMSVVATPGAMLVNIIIACFAIAVCYGVLKFKKIFGDCTLLVVMIIVTLIVNNVSYFVTQNTFFMIVYAVVYYFTTRKLAYPGILDAGFIIAYVNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETIVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDILYTPPTISVNSTLQ------ >FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1 SGFFDVLKQLKQLFWCLVLFITLYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQSFDDSINCVHNTYKGFAVWFKAKHGFVPTFDKSCPIVLGTVFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGAAVSKNSYFDTCVFNSACTTLTGIGGTVVYCAKQGLVEGAKLYSELLPDYYYEHASGNMVKIPAIIRSFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGYICGSSTLGFFKNVFALFNSNMSVVATSGAMLANIVIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGVLDAGFIIAYLNMAPWYVLVLYIMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDKLYTPPTVSVNSTLQ------ >Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1 SGFFDVLKQLKQIFWCLVLFITIYGLCSVYSVATQSYIDSAEGYDYMVIKNGVVQPFDDSINCVHNTYKGFAVWFKAKYGFVPTFAKSCPIVLGTAFDLGNMRPIPDVPAYVALVGRSLVFAINAAFGVTNVCYDHTGASVSKNSYFDTCVFNSACTTLAGLGGTVVYCAKQGLVEGAKLYSELMPDYYYEHASGNMVKIPAIVRGFGLRFVKTQATTYCRVGECTESQAGFCFGGDNWFVYDKEFGDGYICGSSVLGFFKNVFALFNSNMSVVATSGAMLVNIIIACLAIAVCYGVLKFKKIFGDCTLLVVMIIVTLVVNNVSYFVTQNTFFMIVYAIIYYFTTRKLAYPGILDAGFIIAYLNMAPWYVLVLYVMVFLYDSLPSLFKLKVTTNLFEGDKFVGSFESAAMGTFVIDMRSYETLVNSTSLDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVSRNDMLYTPPTVSVNSTLQ------ >K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLENMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDKEFGNGYICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKFKKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGVLDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------ >S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1 SGFFDVLKQLKQIVMLVLGFIFIYGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDTISCVHNTYKGFGEWFKAKYGFIPTFAKACPIVVGTVFDLENMRPIPDVPAYVALVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNAACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDKEFGNGYICGNSVLGFLKNVFRLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKFKKIFGDCTLLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGVLDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------ >UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1 -GFFDVITQLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGYICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKFKKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFITRKLAYPGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSYETIVNSTSIARIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------ >partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1 -GFFDVITQLKQIVILVFVFIFICGLCSVYSAATQSYIESAEGYDYMVIKNGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGYICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKFKKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGVLDAGFIIAYINMAPWYVITAYVLVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQ------ >virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1 --------QLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGYICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKFKKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFTTRKLAYPGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSYETIVNSTPIDRIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQSGLRKM
Reading sequence file /data//pss_subsets/A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result/original_alignment/codeml/fasta/A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result.1
Found 13 sequences of length 1488
Alignment looks like a valid DNA alignment.
Estimated diversity is (pairwise deletion - ignoring missing/ambig): 12.8%
Found 341 informative sites.
Writing alignment of informative sites to: Phi.inf.sites
Writing list of informative sites to: Phi.inf.list
Calculating all pairwise incompatibilities...
Done: 0.0% 50.1% 83.0% 98.6%100.0%
Using a window size of 80 with k as 18
Calculating analytical mean and variance
Doing permutation test for PHI
Doing permutation test for NSS
Doing Permutation test for MAXCHI
Writing alignment of polymorphic unambig sites to: Phi.poly.sites
Window size is 277 polymorphic sites
**p-Value(s)**
----------
NSS: 2.17e-01 (1000 permutations)
Max Chi^2: 1.28e-01 (1000 permutations)
PHI (Permutation): 2.38e-01 (1000 permutations)
PHI (Normal): 2.50e-01
#NEXUS
[ID: 8566743768]
begin taxa;
dimensions ntax=13;
taxlabels
171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1
S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1
UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1
partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1
virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1
79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1
A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1
Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1
DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1
FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1
FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1
Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1
K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1
;
end;
begin trees;
translate
1 171_1ab_VIPR_ALG1_422313312_7525_8994_1_1971_Germany_Dog_Alphacoronavirus_1,
2 S378_1ab_VIPR_ALG1_422313331_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1,
3 UNKNOWN_AX154950_NA_VIPR_P_14536504_7482_8948_1_NA_NA_Unknown_Alphacoronavirus_1,
4 partially_attenuated_Miller_M60_NA_VIPR_P_110746810_7457_8923_1_1987_USA_Swine_Alphacoronavirus_1,
5 virulent_Purdue_NA_VIPR_P_110746837_7475_8941_1_1952_USA_Swine_Alphacoronavirus_1,
6 79_1146_ORF_1a_1b_VIPR_P_62836706_7550_9019_1_NA_USA_Unknown_Alphacoronavirus_1,
7 A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1,
8 Black_1_VIPR_P_161213709_7518_8987_1_NA_USA_Unknown_Alphacoronavirus_1,
9 DF_2_NA_VIPR_P_87242672_7550_9019_1_NA_NA_Unknown_Alphacoronavirus_1,
10 FCoV_C1Je_NA_VIPR_ALG1_112253725_7502_8971_1_NA_NA_Unknown_Alphacoronavirus_1,
11 FIPV_79_1146_NA_VIPR_ALG1_63098798_7320_8789_1_NA_NA_Cat_Alphacoronavirus_1,
12 Felis_catus_NLD_UU88_2010_Pp1ab_VIPR_ALG1_530803158_7365_8834_1_2010_08_17_Netherlands_Cat_Alphacoronavirus_1,
13 K378_1ab_VIPR_ALG1_422313320_7434_8903_1_1978_USA_Dog_Alphacoronavirus_1
;
[Note: This tree contains information on the topology,
branch lengths (if present), and the probability
of the partition indicated by the branch.]
tree con_50_majrule = (1:7.001254e-04,6:6.849791e-04,9:2.717070e-03,11:2.641877e-03,(((((2:6.818509e-04,13:7.140519e-04)0.961:1.605249e-02,((3:3.871383e-03,4:1.100207e-02,5:7.038679e-04)1.000:5.891676e-02,7:3.172013e-02)1.000:6.710270e-02)1.000:6.362068e-01,10:1.607370e-01)0.960:6.408526e-02,12:5.871127e-02)1.000:5.197358e-02,8:3.088216e-02)1.000:4.418980e-02);
[Note: This tree contains information only on the topology
and branch lengths (median of the posterior probability density).]
tree con_50_majrule = (1:7.001254e-04,6:6.849791e-04,9:2.717070e-03,11:2.641877e-03,(((((2:6.818509e-04,13:7.140519e-04):1.605249e-02,((3:3.871383e-03,4:1.100207e-02,5:7.038679e-04):5.891676e-02,7:3.172013e-02):6.710270e-02):6.362068e-01,10:1.607370e-01):6.408526e-02,12:5.871127e-02):5.197358e-02,8:3.088216e-02):4.418980e-02);
end;
Estimated marginal likelihoods for runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /data/mrbayes_input.nex.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -4661.36 -4683.17
2 -4660.99 -4681.56
--------------------------------------
TOTAL -4661.15 -4682.66
--------------------------------------
Model parameter summaries over the runs sampled in files
"/data/mrbayes_input.nex.run1.p" and "/data/mrbayes_input.nex.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/mrbayes_input.nex.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.264993 0.014786 1.047439 1.506054 1.256013 1146.82 1172.07 1.000
r(A<->C){all} 0.089316 0.000342 0.054197 0.126011 0.088443 1003.16 1022.35 1.000
r(A<->G){all} 0.281720 0.000979 0.221727 0.344311 0.280698 785.83 855.35 1.000
r(A<->T){all} 0.047101 0.000106 0.027708 0.066948 0.046669 1017.93 1051.04 1.000
r(C<->G){all} 0.012941 0.000088 0.000001 0.030723 0.011114 947.80 987.74 1.004
r(C<->T){all} 0.518649 0.001145 0.454678 0.585799 0.518087 691.66 749.04 1.001
r(G<->T){all} 0.050273 0.000105 0.030659 0.069703 0.049599 803.52 935.32 1.000
pi(A){all} 0.262047 0.000109 0.242898 0.283907 0.262121 1138.89 1218.65 1.000
pi(C){all} 0.165678 0.000062 0.148604 0.179710 0.165512 850.77 1066.45 1.001
pi(G){all} 0.194465 0.000088 0.175691 0.212001 0.194331 1038.74 1088.86 1.001
pi(T){all} 0.377809 0.000120 0.355791 0.398486 0.377702 1173.44 1226.53 1.000
alpha{1,2} 0.132752 0.000177 0.106451 0.158016 0.131463 1220.00 1320.32 1.000
alpha{3} 5.401932 2.818308 2.386186 8.588265 5.159255 1296.93 1305.92 1.000
pinvar{all} 0.279501 0.001545 0.198946 0.355116 0.280502 1280.12 1303.44 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
CODONML (in paml version 4.9h, March 2018) /data/fasta_checked/A76_1ab_VIPR_ALG1_418470985_7438_8907_1_1976_USA_Dog_Alphacoronavirus_1.result.1
Model: One dN/dS ratio,
Codon frequency model: F3x4
Site-class models:
ns = 13 ls = 482
Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 22 22 28 26 22 29 | Ser TCT 11 11 11 10 11 13 | Tyr TAT 24 24 22 24 24 22 | Cys TGT 7 7 6 10 7 8
TTC 14 14 7 11 14 8 | TCC 4 4 1 6 4 2 | TAC 12 12 15 12 12 14 | TGC 9 9 9 7 9 8
Leu TTA 8 8 1 7 8 8 | TCA 9 9 9 9 9 8 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 8 8 3 6 8 8 | TCG 1 1 1 0 1 1 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 3 4 4 4
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 13 19 9 14 11 | Pro CCT 5 5 8 4 4 5 | His CAT 5 5 4 3 5 2 | Arg CGT 1 1 1 1 1 1
CTC 4 4 7 6 4 3 | CCC 0 0 0 0 0 2 | CAC 0 0 0 1 0 2 | CGC 1 1 0 1 1 1
CTA 5 5 4 8 5 4 | CCA 7 7 6 6 7 6 | Gln CAA 5 5 4 5 5 6 | CGA 0 0 1 0 0 0
CTG 2 2 1 2 2 2 | CCG 0 0 0 2 0 1 | CAG 4 4 4 4 4 3 | CGG 1 1 0 1 1 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 17 17 32 22 18 21 | Thr ACT 13 13 14 12 13 10 | Asn AAT 15 15 13 13 15 12 | Ser AGT 9 9 7 7 9 7
ATC 6 6 6 4 6 8 | ACC 2 2 3 2 2 1 | AAC 9 9 13 11 9 11 | AGC 1 1 1 2 1 3
ATA 3 3 1 2 3 4 | ACA 16 16 14 17 16 20 | Lys AAA 13 13 15 12 13 16 | Arg AGA 6 6 6 6 6 7
Met ATG 15 15 18 15 14 16 | ACG 2 2 1 3 2 1 | AAG 11 11 10 12 11 8 | AGG 1 1 2 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 25 25 22 23 25 25 | Ala GCT 18 18 25 17 18 16 | Asp GAT 19 19 14 16 19 17 | Gly GGT 24 24 24 25 24 27
GTC 7 7 7 7 7 6 | GCC 3 3 1 4 3 8 | GAC 3 3 9 6 3 5 | GGC 4 4 5 4 4 5
GTA 12 12 5 13 12 8 | GCA 12 12 9 12 12 8 | Glu GAA 5 5 7 5 5 6 | GGA 7 7 9 7 7 4
GTG 7 7 10 7 7 11 | GCG 4 4 0 3 4 2 | GAG 6 6 4 6 6 5 | GGG 1 1 0 1 1 1
--------------------------------------------------------------------------------------------------------------------------------------
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT 22 25 26 26 29 28 | Ser TCT 11 14 11 11 15 13 | Tyr TAT 24 20 21 21 22 22 | Cys TGT 7 12 7 7 9 9
TTC 14 11 8 8 8 9 | TCC 4 3 2 2 1 2 | TAC 12 17 16 16 14 14 | TGC 9 4 8 8 7 7
Leu TTA 9 6 3 3 2 3 | TCA 9 8 8 8 8 8 | *** TAA 0 0 0 0 0 0 | *** TGA 0 0 0 0 0 0
TTG 7 10 2 2 3 2 | TCG 1 0 0 0 0 0 | TAG 0 0 0 0 0 0 | Trp TGG 4 4 3 3 3 3
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT 13 11 23 23 18 18 | Pro CCT 5 6 9 9 7 8 | His CAT 5 3 3 3 4 4 | Arg CGT 1 1 1 1 2 2
CTC 4 4 3 3 5 5 | CCC 0 0 0 0 0 0 | CAC 0 1 1 1 0 0 | CGC 1 1 0 0 0 0
CTA 5 4 2 2 3 3 | CCA 7 7 5 5 6 6 | Gln CAA 5 6 4 4 4 4 | CGA 0 0 0 0 0 0
CTG 2 3 3 3 1 1 | CCG 0 0 0 0 0 0 | CAG 4 3 4 4 4 4 | CGG 1 1 1 1 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT 17 18 30 30 32 32 | Thr ACT 13 10 16 16 15 16 | Asn AAT 15 11 12 12 17 17 | Ser AGT 9 7 5 5 6 6
ATC 6 7 5 5 7 5 | ACC 2 2 2 2 4 3 | AAC 9 13 14 14 10 10 | AGC 1 2 2 2 1 1
ATA 3 2 1 1 1 0 | ACA 16 19 13 13 12 13 | Lys AAA 13 11 16 16 15 15 | Arg AGA 6 6 8 8 8 8
Met ATG 14 16 18 18 17 17 | ACG 2 0 1 1 1 1 | AAG 12 13 9 9 10 10 | AGG 1 1 1 1 0 0
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT 25 24 26 26 27 28 | Ala GCT 18 18 23 23 23 23 | Asp GAT 19 16 9 9 10 10 | Gly GGT 24 27 27 27 24 24
GTC 7 10 5 5 4 4 | GCC 3 3 4 4 1 1 | GAC 3 5 13 13 12 13 | GGC 4 4 2 2 5 5
GTA 12 12 6 6 3 3 | GCA 12 17 9 9 8 8 | Glu GAA 5 5 8 8 8 8 | GGA 7 6 7 7 8 8
GTG 7 6 9 9 12 12 | GCG 4 0 1 1 2 2 | GAG 6 6 4 4 3 3 | GGG 1 0 2 2 1 1
--------------------------------------------------------------------------------------------------------------------------------------
------------------------------------------------------
Phe TTT 29 | Ser TCT 14 | Tyr TAT 22 | Cys TGT 9
TTC 8 | TCC 1 | TAC 14 | TGC 7
Leu TTA 2 | TCA 8 | *** TAA 0 | *** TGA 0
TTG 3 | TCG 0 | TAG 0 | Trp TGG 3
------------------------------------------------------
Leu CTT 18 | Pro CCT 8 | His CAT 4 | Arg CGT 2
CTC 5 | CCC 0 | CAC 0 | CGC 0
CTA 3 | CCA 6 | Gln CAA 4 | CGA 0
CTG 1 | CCG 0 | CAG 4 | CGG 0
------------------------------------------------------
Ile ATT 32 | Thr ACT 15 | Asn AAT 17 | Ser AGT 6
ATC 7 | ACC 4 | AAC 10 | AGC 1
ATA 0 | ACA 13 | Lys AAA 15 | Arg AGA 8
Met ATG 17 | ACG 1 | AAG 10 | AGG 0
------------------------------------------------------
Val GTT 27 | Ala GCT 22 | Asp GAT 11 | Gly GGT 24
GTC 4 | GCC 1 | GAC 12 | GGC 5
GTA 3 | GCA 8 | Glu GAA 8 | GGA 8
GTG 12 | GCG 2 | GAG 3 | GGG 1
------------------------------------------------------
Codon position x base (3x4) table for each sequence.
#1: C1
position 1: T:0.27593 C:0.10996 A:0.28838 G:0.32573
position 2: T:0.34855 C:0.22199 A:0.27178 G:0.15768
position 3: T:0.47303 C:0.16390 A:0.22407 G:0.13900
Average T:0.36584 C:0.16528 A:0.26141 G:0.20747
#2: C2
position 1: T:0.27593 C:0.10996 A:0.28838 G:0.32573
position 2: T:0.34855 C:0.22199 A:0.27178 G:0.15768
position 3: T:0.47303 C:0.16390 A:0.22407 G:0.13900
Average T:0.36584 C:0.16528 A:0.26141 G:0.20747
#3: C3
position 1: T:0.24066 C:0.12241 A:0.32365 G:0.31328
position 2: T:0.35477 C:0.21369 A:0.27801 G:0.15353
position 3: T:0.51867 C:0.17427 A:0.18880 G:0.11826
Average T:0.37137 C:0.17012 A:0.26349 G:0.19502
#4: C4
position 1: T:0.27386 C:0.10996 A:0.29253 G:0.32365
position 2: T:0.34855 C:0.22199 A:0.26971 G:0.15975
position 3: T:0.46058 C:0.17427 A:0.22614 G:0.13900
Average T:0.36100 C:0.16874 A:0.26279 G:0.20747
#5: C5
position 1: T:0.27593 C:0.10996 A:0.28838 G:0.32573
position 2: T:0.35062 C:0.21992 A:0.27178 G:0.15768
position 3: T:0.47510 C:0.16390 A:0.22407 G:0.13693
Average T:0.36722 C:0.16459 A:0.26141 G:0.20678
#6: C6
position 1: T:0.27593 C:0.10166 A:0.30290 G:0.31950
position 2: T:0.35685 C:0.21577 A:0.26763 G:0.15975
position 3: T:0.46888 C:0.18050 A:0.21784 G:0.13278
Average T:0.36722 C:0.16598 A:0.26279 G:0.20401
#7: C7
position 1: T:0.27593 C:0.10996 A:0.28838 G:0.32573
position 2: T:0.34647 C:0.22199 A:0.27386 G:0.15768
position 3: T:0.47303 C:0.16390 A:0.22614 G:0.13693
Average T:0.36515 C:0.16528 A:0.26279 G:0.20678
#8: C8
position 1: T:0.27801 C:0.10581 A:0.28631 G:0.32988
position 2: T:0.35062 C:0.22199 A:0.26971 G:0.15768
position 3: T:0.46266 C:0.18050 A:0.22614 G:0.13071
Average T:0.36376 C:0.16943 A:0.26072 G:0.20609
#9: C9
position 1: T:0.23859 C:0.12241 A:0.31743 G:0.32158
position 2: T:0.35270 C:0.21577 A:0.27801 G:0.15353
position 3: T:0.51660 C:0.17635 A:0.18672 G:0.12033
Average T:0.36929 C:0.17151 A:0.26072 G:0.19848
#10: C10
position 1: T:0.23859 C:0.12241 A:0.31743 G:0.32158
position 2: T:0.35270 C:0.21577 A:0.27801 G:0.15353
position 3: T:0.51660 C:0.17635 A:0.18672 G:0.12033
Average T:0.36929 C:0.17151 A:0.26072 G:0.19848
#11: C11
position 1: T:0.25104 C:0.11203 A:0.32365 G:0.31328
position 2: T:0.35685 C:0.21369 A:0.27593 G:0.15353
position 3: T:0.53942 C:0.16390 A:0.17842 G:0.11826
Average T:0.38243 C:0.16321 A:0.25934 G:0.19502
#12: C12
position 1: T:0.24896 C:0.11411 A:0.31950 G:0.31743
position 2: T:0.35270 C:0.21577 A:0.27801 G:0.15353
position 3: T:0.53942 C:0.16390 A:0.18050 G:0.11618
Average T:0.38036 C:0.16459 A:0.25934 G:0.19571
#13: C13
position 1: T:0.24896 C:0.11411 A:0.32365 G:0.31328
position 2: T:0.35477 C:0.21369 A:0.27801 G:0.15353
position 3: T:0.53942 C:0.16390 A:0.17842 G:0.11826
Average T:0.38105 C:0.16390 A:0.26003 G:0.19502
Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT 334 | Ser S TCT 156 | Tyr Y TAT 292 | Cys C TGT 105
TTC 134 | TCC 36 | TAC 180 | TGC 101
Leu L TTA 68 | TCA 110 | *** * TAA 0 | *** * TGA 0
TTG 70 | TCG 6 | TAG 0 | Trp W TGG 46
------------------------------------------------------------------------------
Leu L CTT 203 | Pro P CCT 83 | His H CAT 50 | Arg R CGT 16
CTC 57 | CCC 2 | CAC 6 | CGC 7
CTA 53 | CCA 81 | Gln Q CAA 61 | CGA 1
CTG 25 | CCG 3 | CAG 50 | CGG 8
------------------------------------------------------------------------------
Ile I ATT 318 | Thr T ACT 176 | Asn N AAT 184 | Ser S AGT 92
ATC 78 | ACC 31 | AAC 142 | AGC 19
ATA 24 | ACA 198 | Lys K AAA 183 | Arg R AGA 89
Met M ATG 210 | ACG 18 | AAG 136 | AGG 11
------------------------------------------------------------------------------
Val V GTT 328 | Ala A GCT 262 | Asp D GAT 188 | Gly G GGT 325
GTC 80 | GCC 39 | GAC 100 | GGC 53
GTA 107 | GCA 136 | Glu E GAA 83 | GGA 92
GTG 116 | GCG 29 | GAG 62 | GGG 13
------------------------------------------------------------------------------
Codon position x base (3x4) table, overall
position 1: T:0.26141 C:0.11267 A:0.30466 G:0.32126
position 2: T:0.35190 C:0.21800 A:0.27402 G:0.15608
position 3: T:0.49665 C:0.16996 A:0.20523 G:0.12815
Average T:0.36999 C:0.16688 A:0.26130 G:0.20183
Model 1: NearlyNeutral (2 categories)
TREE # 1: (1, 2, 5, 7, (((((10, 9), ((11, 12, 13), 3)), 6), 8), 4)); MP score: 548
lnL(ntime: 20 np: 23): -4262.719327 +0.000000
14..1 14..2 14..5 14..7 14..15 15..16 16..17 17..18 18..19 19..10 19..9 18..20 20..21 21..11 21..12 21..13 20..3 17..6 16..8 15..4
0.000004 0.000004 0.004444 0.004458 0.089624 0.081753 0.101924 1.129049 0.034221 0.000004 0.000004 0.124349 0.110821 0.006424 0.021717 0.000004 0.061164 0.294771 0.122381 0.061181 3.474116 0.955012 0.027035
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 2.248300
(1: 0.000004, 2: 0.000004, 5: 0.004444, 7: 0.004458, (((((10: 0.000004, 9: 0.000004): 0.034221, ((11: 0.006424, 12: 0.021717, 13: 0.000004): 0.110821, 3: 0.061164): 0.124349): 1.129049, 6: 0.294771): 0.101924, 8: 0.122381): 0.081753, 4: 0.061181): 0.089624);
(C1: 0.000004, C2: 0.000004, C5: 0.004444, C7: 0.004458, (((((C10: 0.000004, C9: 0.000004): 0.034221, ((C11: 0.006424, C12: 0.021717, C13: 0.000004): 0.110821, C3: 0.061164): 0.124349): 1.129049, C6: 0.294771): 0.101924, C8: 0.122381): 0.081753, C4: 0.061181): 0.089624);
Detailed output identifying parameters
kappa (ts/tv) = 3.47412
MLEs of dN/dS (w) for site classes (K=2)
p: 0.95501 0.04499
w: 0.02704 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
14..1 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
14..2 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
14..5 0.004 1123.9 322.1 0.0708 0.0004 0.0053 0.4 1.7
14..7 0.004 1123.9 322.1 0.0708 0.0004 0.0053 0.4 1.7
14..15 0.090 1123.9 322.1 0.0708 0.0076 0.1075 8.6 34.6
15..16 0.082 1123.9 322.1 0.0708 0.0069 0.0981 7.8 31.6
16..17 0.102 1123.9 322.1 0.0708 0.0087 0.1223 9.7 39.4
17..18 1.129 1123.9 322.1 0.0708 0.0959 1.3549 107.8 436.4
18..19 0.034 1123.9 322.1 0.0708 0.0029 0.0411 3.3 13.2
19..10 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
19..9 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
18..20 0.124 1123.9 322.1 0.0708 0.0106 0.1492 11.9 48.1
20..21 0.111 1123.9 322.1 0.0708 0.0094 0.1330 10.6 42.8
21..11 0.006 1123.9 322.1 0.0708 0.0005 0.0077 0.6 2.5
21..12 0.022 1123.9 322.1 0.0708 0.0018 0.0261 2.1 8.4
21..13 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
20..3 0.061 1123.9 322.1 0.0708 0.0052 0.0734 5.8 23.6
17..6 0.295 1123.9 322.1 0.0708 0.0250 0.3537 28.2 113.9
16..8 0.122 1123.9 322.1 0.0708 0.0104 0.1469 11.7 47.3
15..4 0.061 1123.9 322.1 0.0708 0.0052 0.0734 5.8 23.6
Time used: 1:09
Model 2: PositiveSelection (3 categories)
TREE # 1: (1, 2, 5, 7, (((((10, 9), ((11, 12, 13), 3)), 6), 8), 4)); MP score: 548
check convergence..
lnL(ntime: 20 np: 25): -4262.719327 +0.000000
14..1 14..2 14..5 14..7 14..15 15..16 16..17 17..18 18..19 19..10 19..9 18..20 20..21 21..11 21..12 21..13 20..3 17..6 16..8 15..4
0.000004 0.000004 0.004444 0.004458 0.089624 0.081753 0.101925 1.129049 0.034221 0.000004 0.000004 0.124349 0.110821 0.006424 0.021716 0.000004 0.061164 0.294770 0.122381 0.061180 3.474117 0.955012 0.003941 0.027035 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 2.248299
(1: 0.000004, 2: 0.000004, 5: 0.004444, 7: 0.004458, (((((10: 0.000004, 9: 0.000004): 0.034221, ((11: 0.006424, 12: 0.021716, 13: 0.000004): 0.110821, 3: 0.061164): 0.124349): 1.129049, 6: 0.294770): 0.101925, 8: 0.122381): 0.081753, 4: 0.061180): 0.089624);
(C1: 0.000004, C2: 0.000004, C5: 0.004444, C7: 0.004458, (((((C10: 0.000004, C9: 0.000004): 0.034221, ((C11: 0.006424, C12: 0.021716, C13: 0.000004): 0.110821, C3: 0.061164): 0.124349): 1.129049, C6: 0.294770): 0.101925, C8: 0.122381): 0.081753, C4: 0.061180): 0.089624);
Detailed output identifying parameters
kappa (ts/tv) = 3.47412
MLEs of dN/dS (w) for site classes (K=3)
p: 0.95501 0.00394 0.04105
w: 0.02704 1.00000 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
14..1 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
14..2 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
14..5 0.004 1123.9 322.1 0.0708 0.0004 0.0053 0.4 1.7
14..7 0.004 1123.9 322.1 0.0708 0.0004 0.0053 0.4 1.7
14..15 0.090 1123.9 322.1 0.0708 0.0076 0.1075 8.6 34.6
15..16 0.082 1123.9 322.1 0.0708 0.0069 0.0981 7.8 31.6
16..17 0.102 1123.9 322.1 0.0708 0.0087 0.1223 9.7 39.4
17..18 1.129 1123.9 322.1 0.0708 0.0959 1.3549 107.8 436.4
18..19 0.034 1123.9 322.1 0.0708 0.0029 0.0411 3.3 13.2
19..10 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
19..9 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
18..20 0.124 1123.9 322.1 0.0708 0.0106 0.1492 11.9 48.1
20..21 0.111 1123.9 322.1 0.0708 0.0094 0.1330 10.6 42.8
21..11 0.006 1123.9 322.1 0.0708 0.0005 0.0077 0.6 2.5
21..12 0.022 1123.9 322.1 0.0708 0.0018 0.0261 2.1 8.4
21..13 0.000 1123.9 322.1 0.0708 0.0000 0.0000 0.0 0.0
20..3 0.061 1123.9 322.1 0.0708 0.0052 0.0734 5.8 23.6
17..6 0.295 1123.9 322.1 0.0708 0.0250 0.3537 28.2 113.9
16..8 0.122 1123.9 322.1 0.0708 0.0104 0.1469 11.7 47.3
15..4 0.061 1123.9 322.1 0.0708 0.0052 0.0734 5.8 23.6
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
9 L 0.542 1.193 +- 0.465
11 L 0.654 1.342 +- 0.283
65 V 0.512 1.247 +- 0.322
248 T 0.586 1.307 +- 0.293
The grid (see ternary graph for p0-p1)
w0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
w2: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
w0: 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
w2: 0.978 0.020 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000
Posterior for p0-p1 (see the ternary graph) (YWN2015, fig. 1)
0.000
0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
sum of density on p0-p1 = 1.000000
Time used: 2:23
Model 7: beta (10 categories)
TREE # 1: (1, 2, 5, 7, (((((10, 9), ((11, 12, 13), 3)), 6), 8), 4)); MP score: 548
lnL(ntime: 20 np: 23): -4263.735724 +0.000000
14..1 14..2 14..5 14..7 14..15 15..16 16..17 17..18 18..19 19..10 19..9 18..20 20..21 21..11 21..12 21..13 20..3 17..6 16..8 15..4
0.000004 0.000004 0.004408 0.004410 0.088479 0.077972 0.082817 1.099344 0.049044 0.000004 0.000004 0.109146 0.109916 0.006546 0.022105 0.000004 0.064139 0.304519 0.122423 0.060442 3.353991 0.156313 2.354599
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 2.205728
(1: 0.000004, 2: 0.000004, 5: 0.004408, 7: 0.004410, (((((10: 0.000004, 9: 0.000004): 0.049044, ((11: 0.006546, 12: 0.022105, 13: 0.000004): 0.109916, 3: 0.064139): 0.109146): 1.099344, 6: 0.304519): 0.082817, 8: 0.122423): 0.077972, 4: 0.060442): 0.088479);
(C1: 0.000004, C2: 0.000004, C5: 0.004408, C7: 0.004410, (((((C10: 0.000004, C9: 0.000004): 0.049044, ((C11: 0.006546, C12: 0.022105, C13: 0.000004): 0.109916, C3: 0.064139): 0.109146): 1.099344, C6: 0.304519): 0.082817, C8: 0.122423): 0.077972, C4: 0.060442): 0.088479);
Detailed output identifying parameters
kappa (ts/tv) = 3.35399
Parameters in M7 (beta):
p = 0.15631 q = 2.35460
MLEs of dN/dS (w) for site classes (K=10)
p: 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000 0.10000
w: 0.00000 0.00000 0.00005 0.00039 0.00196 0.00713 0.02111 0.05485 0.13402 0.35184
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
14..1 0.000 1125.3 320.7 0.0571 0.0000 0.0000 0.0 0.0
14..2 0.000 1125.3 320.7 0.0571 0.0000 0.0000 0.0 0.0
14..5 0.004 1125.3 320.7 0.0571 0.0003 0.0055 0.4 1.8
14..7 0.004 1125.3 320.7 0.0571 0.0003 0.0055 0.4 1.8
14..15 0.088 1125.3 320.7 0.0571 0.0063 0.1108 7.1 35.5
15..16 0.078 1125.3 320.7 0.0571 0.0056 0.0976 6.3 31.3
16..17 0.083 1125.3 320.7 0.0571 0.0059 0.1037 6.7 33.3
17..18 1.099 1125.3 320.7 0.0571 0.0786 1.3764 88.5 441.4
18..19 0.049 1125.3 320.7 0.0571 0.0035 0.0614 3.9 19.7
19..10 0.000 1125.3 320.7 0.0571 0.0000 0.0000 0.0 0.0
19..9 0.000 1125.3 320.7 0.0571 0.0000 0.0000 0.0 0.0
18..20 0.109 1125.3 320.7 0.0571 0.0078 0.1366 8.8 43.8
20..21 0.110 1125.3 320.7 0.0571 0.0079 0.1376 8.8 44.1
21..11 0.007 1125.3 320.7 0.0571 0.0005 0.0082 0.5 2.6
21..12 0.022 1125.3 320.7 0.0571 0.0016 0.0277 1.8 8.9
21..13 0.000 1125.3 320.7 0.0571 0.0000 0.0000 0.0 0.0
20..3 0.064 1125.3 320.7 0.0571 0.0046 0.0803 5.2 25.8
17..6 0.305 1125.3 320.7 0.0571 0.0218 0.3813 24.5 122.3
16..8 0.122 1125.3 320.7 0.0571 0.0088 0.1533 9.9 49.2
15..4 0.060 1125.3 320.7 0.0571 0.0043 0.0757 4.9 24.3
Time used: 7:12
Model 8: beta&w>1 (11 categories)
TREE # 1: (1, 2, 5, 7, (((((10, 9), ((11, 12, 13), 3)), 6), 8), 4)); MP score: 548
lnL(ntime: 20 np: 25): -4260.007726 +0.000000
14..1 14..2 14..5 14..7 14..15 15..16 16..17 17..18 18..19 19..10 19..9 18..20 20..21 21..11 21..12 21..13 20..3 17..6 16..8 15..4
0.000004 0.000004 0.004435 0.004442 0.089261 0.080710 0.092921 1.136608 0.037722 0.000004 0.000004 0.121092 0.111134 0.006452 0.021808 0.000004 0.061327 0.301574 0.122296 0.061016 3.428708 0.967350 0.381033 10.410272 1.000000
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).
tree length = 2.252819
(1: 0.000004, 2: 0.000004, 5: 0.004435, 7: 0.004442, (((((10: 0.000004, 9: 0.000004): 0.037722, ((11: 0.006452, 12: 0.021808, 13: 0.000004): 0.111134, 3: 0.061327): 0.121092): 1.136608, 6: 0.301574): 0.092921, 8: 0.122296): 0.080710, 4: 0.061016): 0.089261);
(C1: 0.000004, C2: 0.000004, C5: 0.004435, C7: 0.004442, (((((C10: 0.000004, C9: 0.000004): 0.037722, ((C11: 0.006452, C12: 0.021808, C13: 0.000004): 0.111134, C3: 0.061327): 0.121092): 1.136608, C6: 0.301574): 0.092921, C8: 0.122296): 0.080710, C4: 0.061016): 0.089261);
Detailed output identifying parameters
kappa (ts/tv) = 3.42871
Parameters in M8 (beta&w>1):
p0 = 0.96735 p = 0.38103 q = 10.41027
(p1 = 0.03265) w = 1.00000
MLEs of dN/dS (w) for site classes (K=11)
p: 0.09674 0.09674 0.09674 0.09674 0.09674 0.09674 0.09674 0.09674 0.09674 0.09674 0.03265
w: 0.00003 0.00050 0.00193 0.00477 0.00952 0.01692 0.02822 0.04587 0.07612 0.14722 1.00000
dN & dS for each branch
branch t N S dN/dS dN dS N*dN S*dS
14..1 0.000 1124.4 321.6 0.0647 0.0000 0.0000 0.0 0.0
14..2 0.000 1124.4 321.6 0.0647 0.0000 0.0000 0.0 0.0
14..5 0.004 1124.4 321.6 0.0647 0.0004 0.0054 0.4 1.7
14..7 0.004 1124.4 321.6 0.0647 0.0004 0.0054 0.4 1.7
14..15 0.089 1124.4 321.6 0.0647 0.0071 0.1091 7.9 35.1
15..16 0.081 1124.4 321.6 0.0647 0.0064 0.0987 7.2 31.7
16..17 0.093 1124.4 321.6 0.0647 0.0073 0.1136 8.3 36.5
17..18 1.137 1124.4 321.6 0.0647 0.0899 1.3894 101.0 446.8
18..19 0.038 1124.4 321.6 0.0647 0.0030 0.0461 3.4 14.8
19..10 0.000 1124.4 321.6 0.0647 0.0000 0.0000 0.0 0.0
19..9 0.000 1124.4 321.6 0.0647 0.0000 0.0000 0.0 0.0
18..20 0.121 1124.4 321.6 0.0647 0.0096 0.1480 10.8 47.6
20..21 0.111 1124.4 321.6 0.0647 0.0088 0.1359 9.9 43.7
21..11 0.006 1124.4 321.6 0.0647 0.0005 0.0079 0.6 2.5
21..12 0.022 1124.4 321.6 0.0647 0.0017 0.0267 1.9 8.6
21..13 0.000 1124.4 321.6 0.0647 0.0000 0.0000 0.0 0.0
20..3 0.061 1124.4 321.6 0.0647 0.0048 0.0750 5.5 24.1
17..6 0.302 1124.4 321.6 0.0647 0.0238 0.3687 26.8 118.5
16..8 0.122 1124.4 321.6 0.0647 0.0097 0.1495 10.9 48.1
15..4 0.061 1124.4 321.6 0.0647 0.0048 0.0746 5.4 24.0
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
7 W 0.619 1.121 +- 0.520
9 L 0.678 1.152 +- 0.555
11 L 0.899 1.425 +- 0.292
65 V 0.649 1.154 +- 0.510
248 T 0.810 1.338 +- 0.387
257 A 0.506 0.996 +- 0.543
367 I 0.604 1.099 +- 0.535
The grid
p0: 0.050 0.150 0.250 0.350 0.450 0.550 0.650 0.750 0.850 0.950
p : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
q : 0.100 0.300 0.500 0.700 0.900 1.100 1.300 1.500 1.700 1.900
ws: 1.500 2.500 3.500 4.500 5.500 6.500 7.500 8.500 9.500 10.500
Posterior on the grid
p0: 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.000
p : 1.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
q : 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 0.081 0.915
ws: 0.987 0.012 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
Time used: 15:36
Model 1: NearlyNeutral -4262.719327
Model 2: PositiveSelection -4262.719327
Model 7: beta -4263.735724
Model 8: beta&w>1 -4260.007726
Model 2 vs 1 0
Model 8 vs 7 7.455996
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: C1)
Pr(w>1) post mean +- SE for w
7 W 0.619 1.121 +- 0.520
9 L 0.678 1.152 +- 0.555
11 L 0.899 1.425 +- 0.292
65 V 0.649 1.154 +- 0.510
248 T 0.810 1.338 +- 0.387
257 A 0.506 0.996 +- 0.543
367 I 0.604 1.099 +- 0.535
Not all of the following information may be relevant for the case being handled, since this project may be part of a much larger auto-PSS-genome project where several methods of detection of positively selected sites have been used. As such the aligned.score_ascii file may have more sequences than the file effectively used to detect positively selected codons, since the content of this file reflects the content of the file used for the master alignment, from which a subsample may have been taken. # ### General parameters ### # # The maximum number of sequences to use for the master file sequence_limit=90 # The random seed random_seed=3976763 # ### Alignment ### # # The alignment method: clustalw, muscle, kalign, t_coffee, or amap align_method=muscle # Minimum support value for amino acid positions in the alignment tcoffee_min_score=3 # ### MrBayes ### # # Number of iterations in MrBayes mrbayes_generations=1000000 # MrBayes burnin mrbayes_burnin=2500 # ### FUBAR ### # # The maximum number of sequences to be used by FUBAR. fubar_sequence_limit=90 # The number of FUBAR runs fubar_runs=1 # ### codeML ### # # The maximum number of sequences to be used by CodeML codeml_sequence_limit=30 # The number of CodeML runs codeml_runs=1 # The CodeML models to be run, one or more of: '1', '2', '7', and/or '8'. codeml_models=1 2 7 8 # ### OmegaMap ### # # The maximum number of sequences to use in OmegaMap omegamap_sequence_limit=90 # The number of OmegaMap runs omegamap_runs=1 # The number of OmegaMap iterations omegamap_iterations=2500
Phone: +351 220 408 800
Email: info@i3s.up.pt
Address: Rua Alfredo Allen, 208
4200-135 Porto, Portugal
If you use B+, please cite us:
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2018) Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects. Interdisciplinary Sciences: Computational Life Sciences. https://doi.org/10.1007/s12539-018-0282-7
N. Vázquez, C.P. Vieira, B.S.R. Amorin, A. Torres, H. López-Fernández, F. Fdez-Riverola, J.L.R. Sousa, M. Reboiro-Jato, J. Vieira (2017) Automated Collection and Sharing of Adaptive Amino Acid Changes Data. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Porto, Portugal. https://doi.org/10.1007/978-3-319-60816-7_3
