--- EXPERIMENT NOTES




 --- EXPERIMENT PROPERTIES

#Fri Jan 24 09:14:07 GMT 2020
codeml.models=0 1 2 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=MUSCLE
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=/usr/bin/
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb
tcoffee.bin=t_coffee
mrbayes.dir=/opt/mrbayes_3.2.2/src
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/data/7res/ML1652/input.fasta
input.names=
mrbayes.params=
codeml.params=



 --- PSRF SUMMARY

      Estimated marginal likelihoods for runs sampled in files
"/data/7res/ML1652/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/data/7res/ML1652/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)

(Values are saved to the file /data/7res/ML1652/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)

Run   Arithmetic mean   Harmonic mean
--------------------------------------
1      -1695.23         -1700.60
2      -1695.32         -1699.22
--------------------------------------
TOTAL    -1695.27         -1700.13
--------------------------------------


Model parameter summaries over the runs sampled in files
"/data/7res/ML1652/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/data/7res/ML1652/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/data/7res/ML1652/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".

95% HPD Interval
--------------------
Parameter         Mean      Variance     Lower       Upper       Median    min ESS*  avg ESS    PSRF+
------------------------------------------------------------------------------------------------------
TL{all}         0.873761    0.084694    0.336266    1.458347    0.840883   1241.72   1364.08    1.000
r(A<->C){all}   0.146508    0.016750    0.000049    0.418656    0.110766    164.54    240.34    1.004
r(A<->G){all}   0.208863    0.025261    0.000642    0.525351    0.171888    165.58    202.96    1.000
r(A<->T){all}   0.149782    0.018682    0.000007    0.438533    0.109313    228.44    247.32    1.002
r(C<->G){all}   0.154579    0.017016    0.000010    0.419692    0.117938    201.27    217.61    1.000
r(C<->T){all}   0.177977    0.022741    0.000060    0.476770    0.139262    260.38    291.05    1.002
r(G<->T){all}   0.162291    0.019459    0.000070    0.442885    0.127002    310.62    315.74    1.006
pi(A){all}      0.204777    0.000128    0.182444    0.226471    0.204526   1345.69   1423.34    1.000
pi(C){all}      0.317264    0.000177    0.291054    0.343102    0.317107   1249.54   1259.82    1.000
pi(G){all}      0.307525    0.000171    0.282772    0.333347    0.307359   1120.49   1155.61    1.000
pi(T){all}      0.170434    0.000114    0.149107    0.190548    0.170314   1367.94   1424.14    1.000
alpha{1,2}      0.340584    0.162300    0.000395    1.105209    0.204143    915.81   1094.46    1.000
alpha{3}        0.423030    0.237365    0.000125    1.390714    0.247099   1306.09   1341.63    1.000
pinvar{all}     0.997412    0.000004    0.993301    0.999883    0.997960   1079.44   1167.06    1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.


Setting sumt conformat to Simple



 --- CODEML SUMMARY

Model 1: NearlyNeutral	-1639.246618
Model 2: PositiveSelection	-1634.112205
Model 0: one-ratio	-1638.730738
Model 7: beta	-1639.428554
Model 8: beta&w>1	-1639.226697


Model 0 vs 1	1.0317599999998492

Model 2 vs 1	10.26882599999999

Additional information for M1 vs M2:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: NC_011896_1_WP_010908454_1_1755_MLBR_RS08315)

            Pr(w>1)     post mean +- SE for w

   140 I      1.000**       999.000

Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: NC_011896_1_WP_010908454_1_1755_MLBR_RS08315)

            Pr(w>1)     post mean +- SE for w

   140 I      0.934         6.945 +- 2.842


Model 8 vs 7	0.4037140000000363
>C1
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C2
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C3
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGVLKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C4
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGVLKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C5
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C6
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE:  ], CPU=0.00 sec, SCORE=100, Nseq=6, Len=414 

C1              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C2              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C3              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C4              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C5              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C6              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
                **************************************************

C1              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C2              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C3              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C4              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C5              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C6              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
                **************************************************

C1              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
C2              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
C3              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGVLKYSRDLAFT
C4              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGVLKYSRDLAFT
C5              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
C6              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
                ***************************************:**********

C1              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C2              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C3              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C4              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C5              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C6              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
                **************************************************

C1              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C2              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C3              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C4              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C5              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C6              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
                **************************************************

C1              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C2              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C3              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C4              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C5              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C6              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
                **************************************************

C1              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C2              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C3              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C4              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C5              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C6              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
                **************************************************

C1              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C2              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C3              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C4              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C5              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C6              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
                **************************************************

C1              VAATVGKLNYPTHH
C2              VAATVGKLNYPTHH
C3              VAATVGKLNYPTHH
C4              VAATVGKLNYPTHH
C5              VAATVGKLNYPTHH
C6              VAATVGKLNYPTHH
                **************




PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:09 - Revision 1613 - Build 432)
-full_log      	S	[0] 
-genepred_score	S	[0] 	nsd
-run_name      	S	[0] 
-mem_mode      	S	[0] 	mem
-extend        	D	[1] 	1 
-extend_mode   	S	[0] 	very_fast_triplet
-max_n_pair    	D	[0] 	10 
-seq_name_for_quadruplet	S	[0] 	all
-compact       	S	[0] 	default
-clean         	S	[0] 	no
-do_self       	FL	[0] 	0
-do_normalise  	D	[0] 	1000 
-template_file 	S	[0] 
-setenv        	S	[0] 	0
-template_mode 	S	[0] 
-flip          	D	[0] 	0 
-remove_template_file	D	[0] 	0 
-profile_template_file	S	[0] 
-in            	S	[0] 
-seq           	S	[0] 
-aln           	S	[0] 
-method_limits 	S	[0] 
-method        	S	[0] 
-lib           	S	[0] 
-profile       	S	[0] 
-profile1      	S	[0] 
-profile2      	S	[0] 
-pdb           	S	[0] 
-relax_lib     	D	[0] 	1 
-filter_lib    	D	[0] 	0 
-shrink_lib    	D	[0] 	0 
-out_lib       	W_F	[0] 	no
-out_lib_mode  	S	[0] 	primary
-lib_only      	D	[0] 	0 
-outseqweight  	W_F	[0] 	no
-dpa           	FL	[0] 	0
-seq_source    	S	[0] 	ANY
-cosmetic_penalty	D	[0] 	0 
-gapopen       	D	[0] 	0 
-gapext        	D	[0] 	0 
-fgapopen      	D	[0] 	0 
-fgapext       	D	[0] 	0 
-nomatch       	D	[0] 	0 
-newtree       	W_F	[0] 	default
-tree          	W_F	[0] 	NO
-usetree       	R_F	[0] 
-tree_mode     	S	[0] 	nj
-distance_matrix_mode	S	[0] 	ktup
-distance_matrix_sim_mode	S	[0] 	idmat_sim1
-quicktree     	FL	[0] 	0
-outfile       	W_F	[0] 	default
-maximise      	FL	[1] 	1
-output        	S	[1] 	score_ascii	html	score_ascii
-len           	D	[0] 	0 
-infile        	R_F	[1] 	input.prot.fasta.muscle_rs_0_0.fasta.aln
-matrix        	S	[0] 	default
-tg_mode       	D	[0] 	1 
-profile_mode  	S	[0] 	cw_profile_profile
-profile_comparison	S	[0] 	profile
-dp_mode       	S	[0] 	linked_pair_wise
-ktuple        	D	[0] 	1 
-ndiag         	D	[0] 	0 
-diag_threshold	D	[0] 	0 
-diag_mode     	D	[0] 	0 
-sim_matrix    	S	[0] 	vasiliky
-transform     	S	[0] 
-extend_seq    	FL	[0] 	0
-outorder      	S	[0] 	input
-inorder       	S	[0] 	aligned
-seqnos        	S	[0] 	off
-case          	S	[0] 	keep
-cpu           	D	[0] 	0 
-maxnseq       	D	[0] 	1000 
-maxlen        	D	[0] 	-1 
-sample_dp     	D	[0] 	0 
-weight        	S	[0] 	default
-seq_weight    	S	[0] 	no
-align         	FL	[1] 	1
-mocca         	FL	[0] 	0
-domain        	FL	[0] 	0
-start         	D	[0] 	0 
-len           	D	[0] 	0 
-scale         	D	[0] 	0 
-mocca_interactive	FL	[0] 	0
-method_evaluate_mode	S	[0] 	default
-evaluate_mode 	S	[1] 	t_coffee_fast
-get_type      	FL	[0] 	0
-clean_aln     	D	[0] 	0 
-clean_threshold	D	[1] 	1 
-clean_iteration	D	[1] 	1 
-clean_evaluate_mode	S	[0] 	t_coffee_fast
-extend_matrix 	FL	[0] 	0
-prot_min_sim  	D	[40] 	40 
-prot_max_sim  	D	[90] 	90 
-prot_min_cov  	D	[40] 	40 
-pdb_type      	S	[0] 	d
-pdb_min_sim   	D	[35] 	35 
-pdb_max_sim   	D	[100] 	100 
-pdb_min_cov   	D	[50] 	50 
-pdb_blast_server	W_F	[0] 	EBI
-blast         	W_F	[0] 
-blast_server  	W_F	[0] 	EBI
-pdb_db        	W_F	[0] 	pdb
-protein_db    	W_F	[0] 	uniprot
-method_log    	W_F	[0] 	no
-struc_to_use  	S	[0] 
-cache         	W_F	[0] 	use
-align_pdb_param_file	W_F	[0] 	no
-align_pdb_hasch_mode	W_F	[0] 	hasch_ca_trace_bubble
-external_aligner	S	[0] 	NO
-msa_mode      	S	[0] 	tree
-master        	S	[0] 	no
-blast_nseq    	D	[0] 	0 
-lalign_n_top  	D	[0] 	10 
-iterate       	D	[1] 	0 
-trim          	D	[0] 	0 
-split         	D	[0] 	0 
-trimfile      	S	[0] 	default
-split         	D	[0] 	0 
-split_nseq_thres	D	[0] 	0 
-split_score_thres	D	[0] 	0 
-check_pdb_status	D	[0] 	0 
-clean_seq_name	D	[0] 	0 
-seq_to_keep   	S	[0] 
-dpa_master_aln	S	[0] 
-dpa_maxnseq   	D	[0] 	0 
-dpa_min_score1	D	[0] 
-dpa_min_score2	D	[0] 
-dpa_keep_tmpfile	FL	[0] 	0
-dpa_debug     	D	[0] 	0 
-multi_core    	S	[0] 	templates_jobs_relax_msa_evaluate
-n_core        	D	[0] 	0 
-max_n_proc    	D	[0] 	0 
-lib_list      	S	[0] 
-prune_lib_mode	S	[0] 	5
-tip           	S	[0] 	none
-rna_lib       	S	[0] 
-no_warning    	D	[0] 	0 
-run_local_script	D	[0] 	0 
-plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES  [PROTEIN]
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length  414 type PROTEIN Struct Unchecked
  Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length  414 type PROTEIN Struct Unchecked

	Multi Core Mode: 96 processors:

	--- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12420]

Library Relaxation: Multi_proc [96]
 
Relaxation Summary: [12420]--->[12420]



UN-WEIGHTED MODE: EVERY SEQUENCE WEIGHTS 1


OUTPUT RESULTS
	#### File Type= MSA             Format= score_ascii     Name= input.prot.fasta.muscle_rs_0_0.fasta.score_ascii
	#### File Type= MSA             Format= html            Name= input.prot.fasta.muscle_rs_0_0.fasta.html
	#### File Type= MSA             Format= score_ascii     Name= input.prot.fasta.muscle_rs_0_0.fasta.score_ascii

# Command Line: t_coffee -infile input.prot.fasta.muscle_rs_0_0.fasta.aln -output score_ascii -special_mode evaluate -evaluate_mode t_coffee_fast  [PROGRAM:T-COFFEE]
# T-COFFEE Memory Usage: Current= 29.537 Mb, Max= 30.997 Mb
# Results Produced with T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:09 - Revision 1613 - Build 432)
# T-COFFEE is available from http://www.tcoffee.org
# Register on: https://groups.google.com/group/tcoffee/

FORMAT of file input.prot.fasta.muscle_rs_0_0.fasta.ipi_i.fasta Not Supported[FATAL:T-COFFEE]
CLUSTAL W (1.83) multiple sequence alignment

C1              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C2              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C3              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C4              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C5              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
C6              VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
                **************************************************

C1              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C2              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C3              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C4              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C5              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
C6              FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
                **************************************************

C1              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
C2              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
C3              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGVLKYSRDLAFT
C4              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGVLKYSRDLAFT
C5              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
C6              RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
                ***************************************:**********

C1              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C2              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C3              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C4              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C5              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
C6              AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
                **************************************************

C1              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C2              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C3              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C4              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C5              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
C6              ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
                **************************************************

C1              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C2              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C3              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C4              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C5              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
C6              IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
                **************************************************

C1              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C2              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C3              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C4              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C5              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
C6              VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
                **************************************************

C1              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C2              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C3              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C4              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C5              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
C6              LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
                **************************************************

C1              VAATVGKLNYPTHH
C2              VAATVGKLNYPTHH
C3              VAATVGKLNYPTHH
C4              VAATVGKLNYPTHH
C5              VAATVGKLNYPTHH
C6              VAATVGKLNYPTHH
                **************




FORMAT of file input.prot.fasta.muscle_rs_0_0.fasta.ipi_bs.fasta Not Supported[FATAL:T-COFFEE]
input.prot.fasta.muscle_rs_0_0.fasta.aln I:93 S:100 BS:94
# TC_SIMILARITY_MATRIX_FORMAT_01
# SEQ_INDEX C1 0
# SEQ_INDEX C2 1
# SEQ_INDEX C3 2
# SEQ_INDEX C4 3
# SEQ_INDEX C5 4
# SEQ_INDEX C6 5
# PW_SEQ_DISTANCES 
BOT	    0    1	 100.00 C1	 C2	 100.00
TOP	    1    0	 100.00 C2	 C1	 100.00
BOT	    0    2	 99.76 C1	 C3	 99.76
TOP	    2    0	 99.76 C3	 C1	 99.76
BOT	    0    3	 99.76 C1	 C4	 99.76
TOP	    3    0	 99.76 C4	 C1	 99.76
BOT	    0    4	 100.00 C1	 C5	 100.00
TOP	    4    0	 100.00 C5	 C1	 100.00
BOT	    0    5	 100.00 C1	 C6	 100.00
TOP	    5    0	 100.00 C6	 C1	 100.00
BOT	    1    2	 99.76 C2	 C3	 99.76
TOP	    2    1	 99.76 C3	 C2	 99.76
BOT	    1    3	 99.76 C2	 C4	 99.76
TOP	    3    1	 99.76 C4	 C2	 99.76
BOT	    1    4	 100.00 C2	 C5	 100.00
TOP	    4    1	 100.00 C5	 C2	 100.00
BOT	    1    5	 100.00 C2	 C6	 100.00
TOP	    5    1	 100.00 C6	 C2	 100.00
BOT	    2    3	 100.00 C3	 C4	 100.00
TOP	    3    2	 100.00 C4	 C3	 100.00
BOT	    2    4	 99.76 C3	 C5	 99.76
TOP	    4    2	 99.76 C5	 C3	 99.76
BOT	    2    5	 99.76 C3	 C6	 99.76
TOP	    5    2	 99.76 C6	 C3	 99.76
BOT	    3    4	 99.76 C4	 C5	 99.76
TOP	    4    3	 99.76 C5	 C4	 99.76
BOT	    3    5	 99.76 C4	 C6	 99.76
TOP	    5    3	 99.76 C6	 C4	 99.76
BOT	    4    5	 100.00 C5	 C6	 100.00
TOP	    5    4	 100.00 C6	 C5	 100.00
AVG	 0	 C1	  *	 99.90
AVG	 1	 C2	  *	 99.90
AVG	 2	 C3	  *	 99.81
AVG	 3	 C4	  *	 99.81
AVG	 4	 C5	  *	 99.90
AVG	 5	 C6	  *	 99.90
TOT	 TOT	  *	 99.87
CLUSTAL W (1.83) multiple sequence alignment

C1              GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
C2              GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
C3              GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
C4              GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
C5              GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
C6              GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
                **************************************************

C1              ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
C2              ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
C3              ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
C4              ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
C5              ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
C6              ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
                **************************************************

C1              CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
C2              CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
C3              CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
C4              CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
C5              CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
C6              CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
                **************************************************

C1              TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
C2              TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
C3              TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
C4              TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
C5              TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
C6              TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
                **************************************************

C1              GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
C2              GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
C3              GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
C4              GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
C5              GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
C6              GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
                **************************************************

C1              ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
C2              ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
C3              ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
C4              ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
C5              ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
C6              ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
                **************************************************

C1              CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
C2              CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
C3              CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
C4              CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
C5              CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
C6              CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
                **************************************************

C1              GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
C2              GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
C3              GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
C4              GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
C5              GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
C6              GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
                **************************************************

C1              CGGCACTCACCGTGGGCATCTTGAAGTACAGCCGCGACCTGGCGTTCACC
C2              CGGCACTCACCGTGGGCATCTTGAAGTACAGCCGCGACCTGGCGTTCACC
C3              CGGCACTCACCGTGGGCGTCTTGAAGTACAGCCGCGACCTGGCGTTCACC
C4              CGGCACTCACCGTGGGCGTCTTGAAGTACAGCCGCGACCTGGCGTTCACC
C5              CGGCACTCACCGTGGGCATCTTGAAGTACAGCCGCGACCTGGCGTTCACC
C6              CGGCACTCACCGTGGGCATCTTGAAGTACAGCCGCGACCTGGCGTTCACC
                *****************.********************************

C1              GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
C2              GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
C3              GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
C4              GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
C5              GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
C6              GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
                **************************************************

C1              CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
C2              CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
C3              CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
C4              CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
C5              CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
C6              CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
                **************************************************

C1              CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
C2              CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
C3              CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
C4              CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
C5              CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
C6              CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
                **************************************************

C1              GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
C2              GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
C3              GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
C4              GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
C5              GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
C6              GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
                **************************************************

C1              GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
C2              GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
C3              GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
C4              GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
C5              GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
C6              GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
                **************************************************

C1              GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
C2              GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
C3              GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
C4              GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
C5              GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
C6              GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
                **************************************************

C1              ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
C2              ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
C3              ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
C4              ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
C5              ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
C6              ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
                **************************************************

C1              GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
C2              GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
C3              GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
C4              GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
C5              GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
C6              GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
                **************************************************

C1              TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
C2              TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
C3              TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
C4              TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
C5              TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
C6              TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
                **************************************************

C1              GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
C2              GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
C3              GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
C4              GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
C5              GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
C6              GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
                **************************************************

C1              GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
C2              GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
C3              GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
C4              GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
C5              GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
C6              GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
                **************************************************

C1              CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
C2              CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
C3              CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
C4              CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
C5              CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
C6              CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
                **************************************************

C1              CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
C2              CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
C3              CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
C4              CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
C5              CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
C6              CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
                **************************************************

C1              GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
C2              GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
C3              GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
C4              GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
C5              GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
C6              GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
                **************************************************

C1              ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
C2              ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
C3              ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
C4              ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
C5              ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
C6              ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
                **************************************************

C1              GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
C2              GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
C3              GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
C4              GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
C5              GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
C6              GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
                ******************************************



>C1
GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
CGGCACTCACCGTGGGCATCTTGAAGTACAGCCGCGACCTGGCGTTCACC
GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
>C2
GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
CGGCACTCACCGTGGGCATCTTGAAGTACAGCCGCGACCTGGCGTTCACC
GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
>C3
GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
CGGCACTCACCGTGGGCGTCTTGAAGTACAGCCGCGACCTGGCGTTCACC
GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
>C4
GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
CGGCACTCACCGTGGGCGTCTTGAAGTACAGCCGCGACCTGGCGTTCACC
GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
>C5
GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
CGGCACTCACCGTGGGCATCTTGAAGTACAGCCGCGACCTGGCGTTCACC
GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
>C6
GTGAATCACAATCATTTTGTGCCTGCACCGCCTCGCAGGTTGCCGCTCGA
ACTACTGGACACCGTGCCCGATTCACTGCTACGACGGCTGAAGCAGTACT
CGGGCCGGCTAGCTACTGAAGCGGTCACAGCTATGCAAGAACGGTTGCCG
TTCTTCGCCGACTTGGAAGCATCCCAGCGCGCCAGCGTGACGCTGGTGGT
GCAGACGGCGGTGGTCAACTTTGTCCAGTGGATGCAAAACCCGCACAGTG
ACGTGAGCTACACCGCGCAGGCGTTCGAACTGGTACCCCAGGATCTGGCC
CGACGAATCGCGTTACGCCACACCGTGGACATGGTGCGAGTCACCATGGA
GTTCTTCGAAGAAGTTGTGCCACTGCTGGCCCGTTCCGAAGAGCAATTGA
CGGCACTCACCGTGGGCATCTTGAAGTACAGCCGCGACCTGGCGTTCACC
GCCGCCACGGCGTATGCCGACGCGGCCGAAGCGCGCGGCACCTGGGACAG
CAGGATGGAAGCCAGCGTCGTCGACGCGGTAGTGCGCGGCGACACCGGCC
CCGAGCTGTTGTCTCGCGCGGCCGCATTGAACTGGGACACGACCGCACCA
GCAACGGTTGTGGTCGGTACCCCGACACCGAACCACGACGGCCCAAACGG
GCAGGTCAGCAGCGAACGAGCCAGCCAGGAAGTCCGCGAGATCGCAGCCC
GCCACGGCCGCGCGGCGCTGACCGACGTACACGGTACCTGGCTGGTGGCG
ATCATATCCGGCCAATTAGCGCCGACGGACAAATTTTTCAGTGACCTGCT
GCACGCGTTCTCCGACGGACCGGTGGTCATCGGACCAACAGCGCCGATGC
TGACTGCCGCCTACCACAGCGCAAGCGAGGCGGTTTCCGGGATGAACGCC
GTTGCCGGGTGGAGTGGAGCGCCGCGACCCGTGCAGGCCAGAGAACTCCT
GCCGGAACGCGCCTTAATGGGGGATGCATCGGCGATCGTGGCGTTGCATA
CCGATGTGATGCTGCCATTAGCTGATGCAGGGCCGACGCTCATCGAGACA
CTCGACGCGTATCTGGATTGTGGCGGCGCAATTGAGGCCTGCGCCCGCAA
GTTGTTCGTTCATCCAAACACCGTACGGTACCGGCTCAAGCGCATTACAG
ACTTCACCGGACACGATCCCACCCTACCGCGCGATGCATATGTCCTGCGA
GTGGCAGCGACAGTGGGTAAACTCAACTATCCGACTCATCAC
>C1
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C2
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C3
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGVLKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C4
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGVLKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C5
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH
>C6
VNHNHFVPAPPRRLPLELLDTVPDSLLRRLKQYSGRLATEAVTAMQERLP
FFADLEASQRASVTLVVQTAVVNFVQWMQNPHSDVSYTAQAFELVPQDLA
RRIALRHTVDMVRVTMEFFEEVVPLLARSEEQLTALTVGILKYSRDLAFT
AATAYADAAEARGTWDSRMEASVVDAVVRGDTGPELLSRAAALNWDTTAP
ATVVVGTPTPNHDGPNGQVSSERASQEVREIAARHGRAALTDVHGTWLVA
IISGQLAPTDKFFSDLLHAFSDGPVVIGPTAPMLTAAYHSASEAVSGMNA
VAGWSGAPRPVQARELLPERALMGDASAIVALHTDVMLPLADAGPTLIET
LDAYLDCGGAIEACARKLFVHPNTVRYRLKRITDFTGHDPTLPRDAYVLR
VAATVGKLNYPTHH


                            MrBayes v3.2.2 x64

                      (Bayesian Analysis of Phylogeny)

              Distributed under the GNU General Public License


               Type "help" or "help <command>" for information
                     on the commands that are available.

                   Type "about" for authorship and general
                       information about the program.



   Executing file "/data/7res/ML1652/batch/allfiles/mrbayes/input.fasta.fasta.mrb"
   UNIX line termination
   Longest line length = 63
   Parsing file
   Expecting NEXUS formatted file
   Reading data block
      Allocated taxon set
      Allocated matrix
      Defining new matrix with 6 taxa and 1242 characters
      Missing data coded as ?
      Data matrix is interleaved
      Data is Dna
      Gaps coded as -
      Matching characters coded as .
      Taxon 1 -> C1
      Taxon 2 -> C2
      Taxon 3 -> C3
      Taxon 4 -> C4
      Taxon 5 -> C5
      Taxon 6 -> C6
      Successfully read matrix
      Setting default partition (does not divide up characters)
      Setting model defaults
      Seed (for generating default start values) = 1579857147
      Setting output file names to "/data/7res/ML1652/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run<i>.<p|t>"
   Exiting data block
   Reading mrbayes block
      Setting autoclose to yes
      Setting nowarnings to yes
      Defining charset called first_pos
      Defining charset called second_pos
      Defining charset called third_pos
      Defining partition called by_codon
      Setting by_codon as the partition, dividing characters into 3 parts.
      Setting model defaults
      Seed (for generating default start values) = 54498417
      Setting Nst to 6 for partition 1
      Setting Nst to 6 for partition 2
      Setting Nst to 6 for partition 3
      Setting Rates to Invgamma for partition 1
      Setting Rates to Invgamma for partition 2
      Setting Rates to Invgamma for partition 3
      Successfully set likelihood model parameters to all
         applicable data partitions 
      Unlinking
      Setting number of generations to 1000000
      Running Markov chain
      MCMC stamp = 5658741769
      Seed = 2083404791
      Swapseed = 1579857147
      Model settings:

         Settings for partition 1 --
            Datatype  = DNA
            Nucmodel  = 4by4
            Nst       = 6
                        Substitution rates, expressed as proportions
                        of the rate sum, have a Dirichlet prior
                        (1.00,1.00,1.00,1.00,1.00,1.00)
            Covarion  = No
            # States  = 4
                        State frequencies have a Dirichlet prior
                        (1.00,1.00,1.00,1.00)
            Rates     = Invgamma
                        Gamma shape parameter is exponentially
                        distributed with parameter (2.00).
                        Proportion of invariable sites is uniformly dist-
                        ributed on the interval (0.00,1.00).
                        Gamma distribution is approximated using 4 categories.
                        Likelihood summarized over all rate categories in each generation.

         Settings for partition 2 --
            Datatype  = DNA
            Nucmodel  = 4by4
            Nst       = 6
                        Substitution rates, expressed as proportions
                        of the rate sum, have a Dirichlet prior
                        (1.00,1.00,1.00,1.00,1.00,1.00)
            Covarion  = No
            # States  = 4
                        State frequencies have a Dirichlet prior
                        (1.00,1.00,1.00,1.00)
            Rates     = Invgamma
                        Gamma shape parameter is exponentially
                        distributed with parameter (2.00).
                        Proportion of invariable sites is uniformly dist-
                        ributed on the interval (0.00,1.00).
                        Gamma distribution is approximated using 4 categories.
                        Likelihood summarized over all rate categories in each generation.

         Settings for partition 3 --
            Datatype  = DNA
            Nucmodel  = 4by4
            Nst       = 6
                        Substitution rates, expressed as proportions
                        of the rate sum, have a Dirichlet prior
                        (1.00,1.00,1.00,1.00,1.00,1.00)
            Covarion  = No
            # States  = 4
                        State frequencies have a Dirichlet prior
                        (1.00,1.00,1.00,1.00)
            Rates     = Invgamma
                        Gamma shape parameter is exponentially
                        distributed with parameter (2.00).
                        Proportion of invariable sites is uniformly dist-
                        ributed on the interval (0.00,1.00).
                        Gamma distribution is approximated using 4 categories.
                        Likelihood summarized over all rate categories in each generation.

      Active parameters: 

                          Partition(s)
         Parameters       1  2  3
         ------------------------
         Revmat           1  1  1
         Statefreq        2  2  2
         Shape            3  3  4
         Pinvar           5  5  5
         Ratemultiplier   6  6  6
         Topology         7  7  7
         Brlens           8  8  8
         ------------------------

         Parameters can be linked or unlinked across partitions using 'link' and 'unlink'

         1 --  Parameter  = Revmat{all}
               Type       = Rates of reversible rate matrix
               Prior      = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
               Partitions = All

         2 --  Parameter  = Pi{all}
               Type       = Stationary state frequencies
               Prior      = Dirichlet
               Partitions = All

         3 --  Parameter  = Alpha{1,2}
               Type       = Shape of scaled gamma distribution of site rates
               Prior      = Exponential(2.00)
               Partitions = 1 and 2

         4 --  Parameter  = Alpha{3}
               Type       = Shape of scaled gamma distribution of site rates
               Prior      = Exponential(2.00)
               Partition  = 3

         5 --  Parameter  = Pinvar{all}
               Type       = Proportion of invariable sites
               Prior      = Uniform(0.00,1.00)
               Partitions = All

         6 --  Parameter  = Ratemultiplier{all}
               Type       = Partition-specific rate multiplier
               Prior      = Fixed(1.0)
               Partitions = All

         7 --  Parameter  = Tau{all}
               Type       = Topology
               Prior      = All topologies equally probable a priori
               Partitions = All
               Subparam.  = V{all}

         8 --  Parameter  = V{all}
               Type       = Branch lengths
               Prior      = Unconstrained:Exponential(10.0)
               Partitions = All



      The MCMC sampler will use the following moves:
         With prob.  Chain will use move
            1.06 %   Dirichlet(Revmat{all})
            1.06 %   Slider(Revmat{all})
            1.06 %   Dirichlet(Pi{all})
            1.06 %   Slider(Pi{all})
            2.13 %   Multiplier(Alpha{1,2})
            2.13 %   Multiplier(Alpha{3})
            2.13 %   Slider(Pinvar{all})
           10.64 %   ExtSPR(Tau{all},V{all})
           10.64 %   ExtTBR(Tau{all},V{all})
           10.64 %   NNI(Tau{all},V{all})
           10.64 %   ParsSPR(Tau{all},V{all})
           31.91 %   Multiplier(V{all})
           10.64 %   Nodeslider(V{all})
            4.26 %   TLMultiplier(V{all})

      Division 1 has 5 unique site patterns
      Division 2 has 4 unique site patterns
      Division 3 has 4 unique site patterns
      Initializing conditional likelihoods
      Using standard SSE likelihood calculator for division 1 (single-precision)
      Using standard SSE likelihood calculator for division 2 (single-precision)
      Using standard SSE likelihood calculator for division 3 (single-precision)
      Initializing invariable-site conditional likelihoods

      Initial log likelihoods and log prior probs for run 1:
         Chain 1 -- -2783.020970 -- -24.965149
         Chain 2 -- -2786.362614 -- -24.965149
         Chain 3 -- -2785.689197 -- -24.965149
         Chain 4 -- -2786.326043 -- -24.965149

      Initial log likelihoods and log prior probs for run 2:
         Chain 1 -- -2783.022671 -- -24.965149
         Chain 2 -- -2786.362456 -- -24.965149
         Chain 3 -- -2785.689038 -- -24.965149
         Chain 4 -- -2785.689197 -- -24.965149


      Using a relative burnin of 25.0 % for diagnostics

      Chain results (1000000 generations requested):

          0 -- [-2783.021] (-2786.363) (-2785.689) (-2786.326) * [-2783.023] (-2786.362) (-2785.689) (-2785.689) 
        500 -- (-1716.680) (-1739.355) [-1699.536] (-1709.097) * (-1709.097) (-1714.361) [-1706.610] (-1705.393) -- 0:00:00
       1000 -- [-1710.631] (-1713.103) (-1711.942) (-1700.220) * (-1706.128) [-1696.986] (-1706.014) (-1703.457) -- 0:00:00
       1500 -- [-1699.541] (-1707.086) (-1705.535) (-1696.135) * [-1697.039] (-1704.557) (-1700.670) (-1706.297) -- 0:00:00
       2000 -- (-1698.678) (-1705.042) [-1699.011] (-1705.177) * (-1697.083) (-1696.597) (-1702.420) [-1696.136] -- 0:00:00
       2500 -- (-1707.898) (-1710.203) (-1695.879) [-1699.700] * (-1704.739) (-1708.210) (-1699.247) [-1696.094] -- 0:00:00
       3000 -- (-1707.486) (-1703.906) [-1697.843] (-1699.756) * (-1712.243) (-1704.305) [-1696.232] (-1703.521) -- 0:00:00
       3500 -- (-1699.437) (-1699.914) [-1698.405] (-1708.348) * (-1709.895) (-1707.216) [-1702.163] (-1701.777) -- 0:00:00
       4000 -- [-1695.543] (-1705.058) (-1695.587) (-1703.632) * (-1702.168) (-1696.885) [-1696.083] (-1695.005) -- 0:00:00
       4500 -- (-1700.206) (-1700.386) [-1701.504] (-1695.630) * (-1713.932) (-1700.527) [-1699.942] (-1698.489) -- 0:00:00
       5000 -- (-1702.045) (-1700.266) (-1705.724) [-1700.735] * (-1704.738) (-1700.512) (-1699.605) [-1694.765] -- 0:00:00

      Average standard deviation of split frequencies: 0.071425

       5500 -- (-1704.575) (-1709.601) [-1699.100] (-1699.017) * (-1701.823) [-1699.493] (-1696.910) (-1705.894) -- 0:00:00
       6000 -- (-1702.465) (-1705.527) [-1699.525] (-1696.596) * [-1697.559] (-1706.169) (-1703.832) (-1698.092) -- 0:00:00
       6500 -- (-1706.964) (-1703.717) (-1699.999) [-1698.629] * (-1700.375) (-1701.123) [-1701.931] (-1704.001) -- 0:00:00
       7000 -- (-1706.556) (-1696.996) [-1699.296] (-1700.479) * [-1696.504] (-1698.811) (-1701.123) (-1700.470) -- 0:00:00
       7500 -- (-1707.303) [-1703.039] (-1710.145) (-1698.813) * (-1698.848) (-1700.182) (-1711.491) [-1700.216] -- 0:00:00
       8000 -- (-1697.048) [-1701.370] (-1704.725) (-1697.852) * (-1709.224) [-1699.568] (-1710.295) (-1703.510) -- 0:00:00
       8500 -- (-1695.576) (-1697.599) (-1699.610) [-1694.836] * (-1700.946) (-1703.001) (-1701.474) [-1696.056] -- 0:00:00
       9000 -- (-1695.717) [-1699.741] (-1705.706) (-1698.591) * [-1699.275] (-1703.941) (-1701.341) (-1697.467) -- 0:00:00
       9500 -- (-1698.299) (-1700.312) [-1698.456] (-1696.095) * (-1698.855) (-1697.091) (-1695.072) [-1698.972] -- 0:00:00
      10000 -- (-1695.915) (-1702.858) [-1697.673] (-1694.532) * (-1707.342) (-1704.659) [-1693.913] (-1703.497) -- 0:00:00

      Average standard deviation of split frequencies: 0.064282

      10500 -- (-1699.787) (-1702.044) [-1699.886] (-1695.167) * [-1695.098] (-1701.134) (-1699.740) (-1706.881) -- 0:01:34
      11000 -- (-1698.920) [-1705.983] (-1698.053) (-1697.133) * (-1708.010) (-1699.782) (-1703.886) [-1704.211] -- 0:01:29
      11500 -- (-1698.079) (-1712.173) [-1703.497] (-1700.813) * (-1701.835) (-1698.763) (-1701.779) [-1702.018] -- 0:01:25
      12000 -- (-1696.277) (-1703.590) [-1700.878] (-1704.763) * (-1699.174) [-1695.853] (-1704.442) (-1703.002) -- 0:01:22
      12500 -- [-1694.164] (-1701.260) (-1695.863) (-1701.503) * [-1703.768] (-1696.139) (-1709.049) (-1699.082) -- 0:01:19
      13000 -- (-1700.054) (-1704.047) (-1703.945) [-1698.207] * [-1698.946] (-1701.516) (-1706.774) (-1700.681) -- 0:01:15
      13500 -- (-1698.839) (-1704.683) (-1709.168) [-1697.998] * (-1703.113) [-1697.836] (-1697.873) (-1709.190) -- 0:01:13
      14000 -- (-1696.158) [-1699.910] (-1698.827) (-1696.994) * (-1701.848) (-1702.953) (-1696.267) [-1697.649] -- 0:01:10
      14500 -- (-1695.838) [-1705.997] (-1694.766) (-1698.636) * (-1704.442) [-1699.235] (-1699.470) (-1703.334) -- 0:01:07
      15000 -- (-1696.187) [-1698.871] (-1699.729) (-1698.856) * (-1700.225) [-1696.961] (-1697.778) (-1704.624) -- 0:01:05

      Average standard deviation of split frequencies: 0.050890

      15500 -- [-1695.801] (-1709.205) (-1700.884) (-1697.641) * [-1697.630] (-1699.837) (-1695.449) (-1699.339) -- 0:01:03
      16000 -- (-1697.506) [-1705.569] (-1705.707) (-1697.327) * [-1697.625] (-1701.360) (-1695.777) (-1699.843) -- 0:01:01
      16500 -- [-1699.146] (-1705.775) (-1706.776) (-1696.790) * (-1703.069) [-1698.266] (-1696.751) (-1702.136) -- 0:00:59
      17000 -- (-1696.826) (-1709.538) [-1699.140] (-1695.977) * (-1705.357) (-1698.657) (-1696.434) [-1695.697] -- 0:00:57
      17500 -- [-1695.731] (-1714.197) (-1697.667) (-1699.301) * (-1698.237) [-1695.629] (-1696.823) (-1700.390) -- 0:00:56
      18000 -- (-1699.702) (-1702.685) [-1695.556] (-1698.908) * (-1716.020) (-1695.300) [-1696.922] (-1701.228) -- 0:00:54
      18500 -- (-1699.256) (-1708.526) (-1696.521) [-1696.699] * [-1700.075] (-1696.416) (-1696.694) (-1699.743) -- 0:00:53
      19000 -- [-1695.397] (-1701.877) (-1695.452) (-1696.908) * [-1697.926] (-1697.474) (-1695.242) (-1702.350) -- 0:00:51
      19500 -- [-1693.240] (-1710.899) (-1698.339) (-1696.593) * (-1709.476) (-1703.351) (-1697.084) [-1696.708] -- 0:00:50
      20000 -- (-1700.357) (-1703.951) (-1696.768) [-1696.354] * (-1703.159) [-1696.249] (-1696.733) (-1710.252) -- 0:00:49

      Average standard deviation of split frequencies: 0.060826

      20500 -- (-1693.726) [-1701.946] (-1696.310) (-1697.696) * (-1704.411) (-1696.868) (-1699.732) [-1696.282] -- 0:00:47
      21000 -- (-1699.800) (-1701.803) (-1697.394) [-1697.483] * (-1696.968) (-1703.047) (-1699.357) [-1705.844] -- 0:00:46
      21500 -- (-1697.044) (-1701.303) (-1697.944) [-1696.736] * [-1702.124] (-1697.061) (-1697.115) (-1700.709) -- 0:00:45
      22000 -- (-1694.262) (-1695.220) (-1697.564) [-1696.554] * [-1704.007] (-1706.916) (-1701.343) (-1702.256) -- 0:00:44
      22500 -- (-1696.602) (-1696.462) (-1698.485) [-1695.966] * [-1695.969] (-1704.597) (-1701.316) (-1701.202) -- 0:00:43
      23000 -- (-1703.440) (-1695.901) [-1698.415] (-1695.484) * (-1702.202) (-1699.028) (-1699.207) [-1701.246] -- 0:00:42
      23500 -- (-1702.521) (-1696.143) [-1698.125] (-1696.834) * (-1702.936) (-1703.659) (-1699.365) [-1702.860] -- 0:00:41
      24000 -- [-1697.701] (-1695.653) (-1696.398) (-1700.439) * (-1703.962) [-1711.529] (-1700.222) (-1702.633) -- 0:01:21
      24500 -- (-1698.962) [-1695.879] (-1694.639) (-1699.027) * [-1693.896] (-1706.889) (-1697.156) (-1708.522) -- 0:01:19
      25000 -- [-1701.678] (-1696.539) (-1696.292) (-1698.782) * (-1699.262) [-1695.900] (-1696.166) (-1697.509) -- 0:01:18

      Average standard deviation of split frequencies: 0.072524

      25500 -- [-1696.584] (-1695.499) (-1696.761) (-1698.394) * (-1698.054) [-1703.688] (-1698.104) (-1698.636) -- 0:01:16
      26000 -- (-1700.229) [-1696.274] (-1696.600) (-1695.982) * (-1698.587) [-1700.740] (-1697.412) (-1701.251) -- 0:01:14
      26500 -- (-1699.349) (-1696.555) (-1696.292) [-1695.785] * [-1699.431] (-1699.893) (-1697.798) (-1700.627) -- 0:01:13
      27000 -- (-1702.267) [-1696.382] (-1696.369) (-1696.049) * (-1700.774) [-1697.853] (-1698.337) (-1706.758) -- 0:01:12
      27500 -- [-1701.658] (-1698.759) (-1696.043) (-1696.520) * (-1700.746) (-1698.442) [-1697.193] (-1701.844) -- 0:01:10
      28000 -- (-1695.721) (-1697.210) [-1695.934] (-1697.864) * (-1699.041) (-1705.036) (-1696.792) [-1700.735] -- 0:01:09
      28500 -- [-1696.024] (-1697.214) (-1696.016) (-1704.897) * (-1698.810) [-1700.442] (-1699.535) (-1702.454) -- 0:01:08
      29000 -- (-1696.169) (-1697.916) (-1697.063) [-1697.804] * [-1698.629] (-1702.964) (-1699.618) (-1714.970) -- 0:01:06
      29500 -- (-1696.480) (-1698.444) (-1700.604) [-1697.453] * (-1700.933) (-1700.739) (-1697.806) [-1699.811] -- 0:01:05
      30000 -- [-1695.935] (-1698.212) (-1696.387) (-1697.298) * (-1697.801) (-1702.013) [-1697.603] (-1708.049) -- 0:01:04

      Average standard deviation of split frequencies: 0.074495

      30500 -- [-1694.874] (-1696.543) (-1696.258) (-1697.030) * [-1696.875] (-1706.085) (-1700.572) (-1697.100) -- 0:01:03
      31000 -- (-1695.679) (-1698.429) (-1700.179) [-1694.518] * [-1698.722] (-1709.207) (-1696.491) (-1699.467) -- 0:01:02
      31500 -- [-1695.637] (-1696.978) (-1696.028) (-1697.923) * (-1697.964) (-1702.782) (-1696.839) [-1705.018] -- 0:01:01
      32000 -- (-1698.160) [-1695.874] (-1696.464) (-1696.539) * [-1696.255] (-1716.132) (-1704.611) (-1703.120) -- 0:01:00
      32500 -- (-1696.077) (-1695.674) (-1699.678) [-1694.969] * [-1706.610] (-1699.330) (-1704.025) (-1704.094) -- 0:00:59
      33000 -- [-1696.048] (-1696.464) (-1697.200) (-1695.255) * (-1708.144) [-1704.330] (-1698.909) (-1703.471) -- 0:00:58
      33500 -- (-1694.180) [-1696.324] (-1698.736) (-1696.237) * [-1700.078] (-1702.886) (-1699.671) (-1709.515) -- 0:00:57
      34000 -- (-1694.566) (-1699.189) [-1697.486] (-1697.779) * [-1695.513] (-1697.219) (-1702.188) (-1717.035) -- 0:00:56
      34500 -- [-1692.676] (-1696.984) (-1698.495) (-1697.909) * [-1699.793] (-1706.071) (-1693.879) (-1708.900) -- 0:00:55
      35000 -- (-1693.446) (-1697.077) (-1699.162) [-1695.092] * [-1701.408] (-1700.137) (-1695.636) (-1702.066) -- 0:00:55

      Average standard deviation of split frequencies: 0.080438

      35500 -- (-1696.511) [-1693.862] (-1697.496) (-1694.444) * [-1702.885] (-1701.049) (-1698.560) (-1704.395) -- 0:00:54
      36000 -- (-1692.529) (-1698.345) (-1696.372) [-1693.066] * [-1699.516] (-1710.385) (-1698.615) (-1697.564) -- 0:00:53
      36500 -- (-1696.820) (-1696.718) (-1699.096) [-1695.667] * (-1704.479) (-1715.103) [-1696.382] (-1695.446) -- 0:00:52
      37000 -- (-1695.966) (-1696.646) (-1696.077) [-1694.615] * [-1701.947] (-1709.313) (-1695.632) (-1696.148) -- 0:00:52
      37500 -- (-1699.254) [-1695.363] (-1697.104) (-1695.689) * [-1698.445] (-1702.718) (-1694.823) (-1695.819) -- 0:00:51
      38000 -- (-1698.962) (-1696.255) [-1697.093] (-1694.899) * [-1705.443] (-1705.061) (-1698.409) (-1694.615) -- 0:00:50
      38500 -- [-1694.868] (-1696.122) (-1696.799) (-1696.075) * (-1696.410) (-1706.135) (-1697.196) [-1694.372] -- 0:00:49
      39000 -- [-1693.943] (-1697.653) (-1696.207) (-1696.220) * (-1695.894) [-1696.322] (-1697.264) (-1693.113) -- 0:01:13
      39500 -- (-1696.108) (-1697.352) (-1695.688) [-1694.570] * (-1697.339) (-1704.542) (-1695.256) [-1694.383] -- 0:01:12
      40000 -- (-1696.619) (-1695.951) (-1695.939) [-1693.394] * (-1694.619) (-1693.308) (-1694.407) [-1692.930] -- 0:01:12

      Average standard deviation of split frequencies: 0.080177

      40500 -- [-1694.420] (-1698.962) (-1694.137) (-1696.008) * [-1696.643] (-1697.233) (-1695.333) (-1696.050) -- 0:01:11
      41000 -- (-1695.824) (-1698.834) (-1696.436) [-1693.633] * (-1698.937) [-1697.248] (-1696.682) (-1694.959) -- 0:01:10
      41500 -- (-1695.359) (-1697.805) [-1697.219] (-1699.580) * [-1699.213] (-1696.596) (-1694.971) (-1695.007) -- 0:01:09
      42000 -- (-1696.031) (-1696.417) [-1695.362] (-1699.806) * (-1697.195) (-1696.920) [-1696.954] (-1694.602) -- 0:01:08
      42500 -- (-1698.732) (-1697.169) [-1692.422] (-1697.599) * [-1693.945] (-1695.621) (-1696.399) (-1695.503) -- 0:01:07
      43000 -- (-1697.305) (-1697.183) [-1694.783] (-1697.864) * (-1696.229) (-1696.879) [-1697.269] (-1693.400) -- 0:01:06
      43500 -- (-1696.693) (-1698.340) (-1694.671) [-1695.912] * (-1695.659) (-1697.693) [-1696.556] (-1694.757) -- 0:01:05
      44000 -- (-1698.267) (-1696.963) [-1691.996] (-1695.471) * (-1696.281) (-1699.953) (-1697.367) [-1693.255] -- 0:01:05
      44500 -- (-1697.489) (-1698.417) [-1694.500] (-1696.808) * (-1696.203) (-1698.382) [-1697.091] (-1693.992) -- 0:01:04
      45000 -- (-1694.649) [-1697.276] (-1695.238) (-1696.760) * [-1697.213] (-1698.681) (-1698.283) (-1695.443) -- 0:01:03

      Average standard deviation of split frequencies: 0.062220

      45500 -- (-1695.104) (-1697.147) [-1694.555] (-1697.290) * [-1697.503] (-1696.852) (-1696.254) (-1699.059) -- 0:01:02
      46000 -- (-1695.541) (-1696.142) [-1693.851] (-1699.756) * [-1696.780] (-1703.614) (-1697.275) (-1699.663) -- 0:01:02
      46500 -- (-1694.339) [-1696.830] (-1695.253) (-1699.674) * [-1696.241] (-1697.986) (-1699.224) (-1698.104) -- 0:01:01
      47000 -- (-1694.348) (-1696.392) (-1696.427) [-1694.276] * (-1697.921) (-1698.036) [-1694.342] (-1700.493) -- 0:01:00
      47500 -- (-1697.458) (-1698.666) [-1697.067] (-1695.460) * [-1696.102] (-1700.468) (-1698.960) (-1696.662) -- 0:01:00
      48000 -- (-1694.031) [-1694.573] (-1694.407) (-1699.935) * (-1696.653) (-1699.671) [-1698.211] (-1696.438) -- 0:00:59
      48500 -- [-1695.414] (-1692.607) (-1697.474) (-1699.843) * (-1700.432) (-1699.614) [-1695.907] (-1695.869) -- 0:00:58
      49000 -- (-1695.569) (-1695.668) (-1695.463) [-1699.760] * [-1696.057] (-1700.409) (-1696.018) (-1695.523) -- 0:00:58
      49500 -- (-1696.600) [-1694.533] (-1693.214) (-1695.567) * (-1696.677) (-1703.501) (-1696.736) [-1697.454] -- 0:00:57
      50000 -- [-1695.045] (-1698.310) (-1694.905) (-1696.262) * (-1697.295) (-1699.381) (-1698.373) [-1701.420] -- 0:00:57

      Average standard deviation of split frequencies: 0.061805

      50500 -- (-1695.817) (-1695.619) (-1700.761) [-1697.840] * (-1696.814) [-1698.439] (-1704.270) (-1694.884) -- 0:00:56
      51000 -- [-1695.148] (-1692.260) (-1699.469) (-1697.376) * [-1693.920] (-1700.919) (-1703.219) (-1696.542) -- 0:00:55
      51500 -- (-1696.741) (-1695.688) (-1694.551) [-1692.916] * [-1694.054] (-1701.224) (-1698.772) (-1696.228) -- 0:00:55
      52000 -- (-1695.912) [-1692.189] (-1695.177) (-1695.216) * [-1698.813] (-1696.990) (-1700.451) (-1698.663) -- 0:00:54
      52500 -- (-1697.160) (-1698.574) (-1696.855) [-1695.222] * [-1695.842] (-1698.803) (-1701.119) (-1697.282) -- 0:00:54
      53000 -- [-1696.447] (-1699.210) (-1696.397) (-1692.735) * (-1699.733) (-1698.231) (-1697.676) [-1697.858] -- 0:01:11
      53500 -- [-1695.404] (-1696.735) (-1694.947) (-1696.017) * (-1697.231) [-1696.691] (-1696.330) (-1698.359) -- 0:01:10
      54000 -- [-1696.175] (-1696.286) (-1698.386) (-1694.293) * (-1696.343) (-1698.013) [-1697.450] (-1696.459) -- 0:01:10
      54500 -- [-1695.869] (-1696.858) (-1698.306) (-1696.785) * (-1696.838) (-1700.226) (-1695.937) [-1699.265] -- 0:01:09
      55000 -- (-1694.614) [-1695.126] (-1695.172) (-1694.857) * (-1698.143) (-1696.105) (-1697.042) [-1698.233] -- 0:01:08

      Average standard deviation of split frequencies: 0.068546

      55500 -- (-1694.695) [-1694.376] (-1696.670) (-1695.161) * (-1694.737) [-1695.225] (-1696.897) (-1699.228) -- 0:01:08
      56000 -- (-1700.959) [-1696.755] (-1695.834) (-1695.790) * (-1696.910) (-1695.836) (-1696.228) [-1694.705] -- 0:01:07
      56500 -- (-1696.930) (-1695.871) (-1698.137) [-1693.767] * (-1696.662) (-1697.173) (-1697.708) [-1698.876] -- 0:01:06
      57000 -- (-1696.137) (-1698.152) [-1696.816] (-1697.400) * (-1697.657) (-1695.948) [-1696.003] (-1697.033) -- 0:01:06
      57500 -- (-1694.344) (-1694.063) (-1695.501) [-1695.722] * [-1703.845] (-1696.898) (-1699.671) (-1695.829) -- 0:01:05
      58000 -- (-1692.331) [-1696.097] (-1697.199) (-1694.562) * (-1696.834) [-1694.446] (-1694.783) (-1699.189) -- 0:01:04
      58500 -- (-1693.673) (-1695.171) (-1695.422) [-1696.123] * [-1697.885] (-1693.808) (-1697.142) (-1699.998) -- 0:01:04
      59000 -- (-1697.411) [-1695.287] (-1694.326) (-1696.351) * (-1698.256) (-1700.002) [-1696.531] (-1696.088) -- 0:01:03
      59500 -- (-1695.619) [-1692.466] (-1699.585) (-1696.031) * [-1698.854] (-1696.896) (-1697.076) (-1699.651) -- 0:01:03
      60000 -- (-1694.087) [-1696.278] (-1695.472) (-1696.357) * (-1700.195) (-1694.659) [-1699.455] (-1695.920) -- 0:01:02

      Average standard deviation of split frequencies: 0.059943

      60500 -- [-1698.825] (-1697.566) (-1694.765) (-1697.284) * (-1698.335) (-1696.241) (-1697.520) [-1694.326] -- 0:01:02
      61000 -- [-1695.467] (-1698.490) (-1694.322) (-1695.964) * (-1695.336) (-1696.305) (-1698.793) [-1698.648] -- 0:01:01
      61500 -- [-1694.194] (-1698.705) (-1698.407) (-1696.168) * [-1696.058] (-1696.018) (-1695.065) (-1695.532) -- 0:01:01
      62000 -- (-1691.728) [-1698.832] (-1696.717) (-1696.688) * (-1697.259) (-1699.038) (-1698.240) [-1694.992] -- 0:01:00
      62500 -- (-1695.642) [-1698.548] (-1698.042) (-1695.761) * (-1699.223) (-1696.633) (-1699.981) [-1698.541] -- 0:01:00
      63000 -- (-1694.601) (-1697.960) [-1699.894] (-1699.722) * (-1698.923) [-1695.968] (-1696.940) (-1698.289) -- 0:00:59
      63500 -- (-1696.070) [-1697.207] (-1699.915) (-1699.536) * (-1697.473) (-1696.496) (-1697.990) [-1700.545] -- 0:00:58
      64000 -- [-1695.024] (-1693.528) (-1700.437) (-1697.022) * (-1694.684) [-1695.596] (-1697.865) (-1696.479) -- 0:00:58
      64500 -- [-1696.792] (-1697.795) (-1697.765) (-1699.078) * [-1696.708] (-1696.660) (-1695.391) (-1698.054) -- 0:00:58
      65000 -- (-1697.276) (-1700.320) [-1696.095] (-1699.628) * (-1698.485) (-1696.254) [-1700.125] (-1695.836) -- 0:00:57

      Average standard deviation of split frequencies: 0.054283

      65500 -- (-1702.702) (-1696.866) [-1692.600] (-1697.041) * (-1697.511) [-1696.674] (-1698.009) (-1699.101) -- 0:00:57
      66000 -- (-1700.030) (-1696.042) (-1693.706) [-1696.350] * (-1699.715) (-1697.596) (-1699.968) [-1694.423] -- 0:00:56
      66500 -- (-1695.065) [-1696.237] (-1697.935) (-1698.413) * (-1697.294) (-1697.405) [-1696.620] (-1697.710) -- 0:00:56
      67000 -- [-1694.035] (-1695.383) (-1696.140) (-1696.607) * (-1696.300) [-1698.736] (-1695.446) (-1695.745) -- 0:01:09
      67500 -- (-1694.628) (-1697.205) [-1697.839] (-1696.824) * (-1699.865) [-1696.394] (-1697.739) (-1695.162) -- 0:01:09
      68000 -- (-1696.431) (-1696.203) (-1696.251) [-1697.133] * (-1697.925) (-1697.242) (-1698.361) [-1696.740] -- 0:01:08
      68500 -- (-1696.416) (-1699.670) [-1699.508] (-1698.157) * [-1697.862] (-1696.937) (-1698.538) (-1694.098) -- 0:01:07
      69000 -- (-1697.700) (-1697.811) [-1696.316] (-1696.414) * [-1697.725] (-1695.606) (-1700.098) (-1698.278) -- 0:01:07
      69500 -- [-1696.630] (-1701.419) (-1697.018) (-1702.432) * (-1699.432) [-1696.371] (-1697.427) (-1697.799) -- 0:01:06
      70000 -- [-1695.704] (-1696.869) (-1697.592) (-1697.467) * [-1696.159] (-1697.060) (-1696.351) (-1699.737) -- 0:01:06

      Average standard deviation of split frequencies: 0.041804

      70500 -- [-1697.148] (-1697.346) (-1700.355) (-1695.734) * (-1696.591) [-1698.917] (-1699.750) (-1695.465) -- 0:01:05
      71000 -- (-1696.073) (-1697.609) (-1698.640) [-1696.493] * (-1697.647) (-1696.290) [-1696.221] (-1697.401) -- 0:01:05
      71500 -- (-1699.374) (-1697.415) [-1697.567] (-1696.235) * (-1698.409) (-1699.050) (-1697.595) [-1694.425] -- 0:01:04
      72000 -- (-1695.230) [-1697.023] (-1697.490) (-1695.923) * (-1698.558) (-1696.931) (-1696.617) [-1694.396] -- 0:01:04
      72500 -- (-1695.721) (-1697.208) (-1696.894) [-1698.478] * (-1698.473) (-1699.272) (-1695.727) [-1696.226] -- 0:01:03
      73000 -- (-1697.396) (-1696.412) (-1698.043) [-1698.714] * [-1697.136] (-1699.768) (-1695.895) (-1696.717) -- 0:01:03
      73500 -- (-1697.469) (-1696.333) (-1698.873) [-1697.792] * (-1696.239) [-1696.118] (-1696.427) (-1697.916) -- 0:01:03
      74000 -- (-1695.064) (-1695.315) (-1696.679) [-1695.895] * [-1697.225] (-1695.928) (-1696.053) (-1696.107) -- 0:01:02
      74500 -- (-1693.657) (-1699.261) (-1696.362) [-1695.922] * (-1697.280) (-1693.239) (-1695.764) [-1696.565] -- 0:01:02
      75000 -- (-1696.148) (-1696.404) (-1697.702) [-1695.836] * (-1697.772) [-1696.663] (-1695.092) (-1695.599) -- 0:01:01

      Average standard deviation of split frequencies: 0.045327

      75500 -- (-1697.936) [-1696.793] (-1696.605) (-1695.240) * [-1694.165] (-1701.550) (-1697.986) (-1695.599) -- 0:01:01
      76000 -- (-1696.430) [-1696.853] (-1698.293) (-1693.239) * [-1698.136] (-1695.798) (-1697.159) (-1695.919) -- 0:01:00
      76500 -- [-1699.617] (-1696.752) (-1696.074) (-1696.179) * [-1697.808] (-1697.597) (-1696.958) (-1696.433) -- 0:01:00
      77000 -- (-1704.294) (-1696.376) [-1697.281] (-1699.829) * [-1698.714] (-1697.731) (-1696.946) (-1697.031) -- 0:00:59
      77500 -- (-1696.994) (-1698.406) (-1694.456) [-1697.364] * (-1697.419) [-1696.942] (-1696.326) (-1696.275) -- 0:00:59
      78000 -- (-1697.891) (-1695.935) [-1695.708] (-1699.176) * (-1696.830) (-1696.934) [-1696.335] (-1693.138) -- 0:00:59
      78500 -- (-1696.881) [-1696.343] (-1696.455) (-1694.982) * (-1695.057) [-1698.926] (-1697.654) (-1694.840) -- 0:00:58
      79000 -- (-1698.052) (-1696.754) (-1695.908) [-1695.474] * (-1695.708) (-1702.843) (-1696.494) [-1696.190] -- 0:00:58
      79500 -- (-1698.564) (-1698.660) (-1697.465) [-1697.882] * (-1696.731) [-1699.567] (-1696.437) (-1696.131) -- 0:00:57
      80000 -- (-1699.700) (-1698.174) [-1696.091] (-1696.702) * (-1695.818) (-1695.637) [-1696.978] (-1696.791) -- 0:00:57

      Average standard deviation of split frequencies: 0.033811

      80500 -- (-1696.339) (-1698.798) [-1698.233] (-1696.626) * [-1695.018] (-1696.414) (-1696.374) (-1697.258) -- 0:00:57
      81000 -- (-1698.664) [-1697.357] (-1696.898) (-1696.661) * (-1698.130) (-1697.432) [-1699.982] (-1698.301) -- 0:00:56
      81500 -- (-1696.238) [-1699.032] (-1693.826) (-1699.080) * (-1699.225) (-1695.746) [-1696.229] (-1698.949) -- 0:01:07
      82000 -- (-1696.197) (-1696.257) [-1696.434] (-1697.823) * (-1698.684) (-1697.694) (-1697.630) [-1699.148] -- 0:01:07
      82500 -- [-1696.751] (-1695.842) (-1696.517) (-1696.411) * [-1696.467] (-1697.780) (-1697.355) (-1695.210) -- 0:01:06
      83000 -- (-1700.080) (-1697.136) (-1696.949) [-1698.385] * (-1699.775) (-1698.803) [-1696.264] (-1695.743) -- 0:01:06
      83500 -- (-1699.474) (-1697.605) (-1696.436) [-1697.373] * (-1695.342) (-1700.988) [-1696.264] (-1694.734) -- 0:01:05
      84000 -- (-1697.068) (-1697.762) (-1694.795) [-1698.641] * (-1701.804) (-1698.748) (-1695.560) [-1694.960] -- 0:01:05
      84500 -- (-1696.690) (-1699.300) [-1696.488] (-1697.864) * [-1696.132] (-1698.211) (-1696.226) (-1693.683) -- 0:01:05
      85000 -- [-1697.426] (-1698.345) (-1695.535) (-1697.863) * (-1702.066) [-1698.554] (-1698.153) (-1697.706) -- 0:01:04

      Average standard deviation of split frequencies: 0.030833

      85500 -- (-1696.817) (-1697.848) (-1696.189) [-1696.345] * (-1693.815) (-1699.640) [-1698.959] (-1697.589) -- 0:01:04
      86000 -- (-1695.600) (-1696.063) [-1696.607] (-1697.311) * (-1696.760) [-1697.206] (-1698.904) (-1695.313) -- 0:01:03
      86500 -- [-1695.413] (-1698.578) (-1696.952) (-1699.092) * (-1698.026) (-1695.715) (-1698.000) [-1696.218] -- 0:01:03
      87000 -- [-1697.058] (-1699.111) (-1697.705) (-1698.692) * [-1696.769] (-1699.258) (-1701.024) (-1697.832) -- 0:01:02
      87500 -- (-1696.104) (-1698.616) (-1697.105) [-1697.959] * (-1694.771) (-1697.665) [-1700.238] (-1697.673) -- 0:01:02
      88000 -- (-1696.376) [-1700.615] (-1700.439) (-1698.432) * [-1696.732] (-1702.026) (-1696.807) (-1701.152) -- 0:01:02
      88500 -- (-1697.683) (-1702.290) (-1700.636) [-1700.027] * (-1696.784) (-1697.987) (-1696.895) [-1700.074] -- 0:01:01
      89000 -- (-1697.501) (-1701.685) [-1695.897] (-1698.369) * (-1699.400) [-1695.789] (-1697.321) (-1700.283) -- 0:01:01
      89500 -- (-1698.717) (-1700.612) [-1698.327] (-1697.979) * (-1699.640) (-1697.008) [-1696.303] (-1703.349) -- 0:01:01
      90000 -- [-1698.486] (-1699.156) (-1697.998) (-1698.178) * (-1695.513) (-1697.977) [-1696.312] (-1703.575) -- 0:01:00

      Average standard deviation of split frequencies: 0.026971

      90500 -- (-1696.259) (-1699.187) [-1696.176] (-1698.279) * (-1696.340) (-1698.555) (-1698.232) [-1698.544] -- 0:01:00
      91000 -- (-1696.444) (-1701.936) (-1696.946) [-1697.386] * (-1695.723) (-1698.423) (-1699.591) [-1695.773] -- 0:00:59
      91500 -- (-1696.759) (-1698.228) [-1696.341] (-1699.102) * (-1696.124) (-1698.236) [-1695.335] (-1701.968) -- 0:00:59
      92000 -- (-1697.958) [-1698.497] (-1696.960) (-1698.007) * [-1697.098] (-1704.228) (-1697.879) (-1695.684) -- 0:00:59
      92500 -- (-1696.734) [-1696.098] (-1696.493) (-1696.250) * (-1693.473) (-1702.961) [-1697.347] (-1701.662) -- 0:00:58
      93000 -- (-1699.583) [-1697.578] (-1700.780) (-1695.558) * [-1696.561] (-1695.603) (-1696.569) (-1698.904) -- 0:00:58
      93500 -- (-1702.021) (-1694.015) (-1696.905) [-1696.830] * [-1697.414] (-1697.351) (-1696.593) (-1695.583) -- 0:00:58
      94000 -- [-1695.942] (-1696.283) (-1697.899) (-1700.020) * (-1696.396) (-1697.295) [-1697.762] (-1695.664) -- 0:00:57
      94500 -- (-1696.841) (-1696.367) (-1697.217) [-1696.404] * [-1696.121] (-1697.311) (-1696.306) (-1697.087) -- 0:00:57
      95000 -- [-1695.867] (-1697.907) (-1695.518) (-1696.270) * (-1698.618) [-1696.335] (-1698.173) (-1693.855) -- 0:00:57

      Average standard deviation of split frequencies: 0.027928

      95500 -- (-1695.978) (-1697.855) [-1697.265] (-1693.406) * (-1695.332) (-1696.305) [-1699.590] (-1694.024) -- 0:01:06
      96000 -- (-1698.754) (-1698.019) (-1699.938) [-1695.595] * (-1699.562) (-1697.249) [-1697.835] (-1696.124) -- 0:01:05
      96500 -- (-1696.253) (-1695.524) [-1699.961] (-1696.197) * (-1696.475) [-1696.646] (-1696.337) (-1695.094) -- 0:01:05
      97000 -- (-1700.156) (-1694.550) (-1699.356) [-1694.416] * (-1698.896) (-1697.839) (-1698.542) [-1697.636] -- 0:01:05
      97500 -- (-1701.510) (-1697.614) [-1696.200] (-1696.690) * [-1698.569] (-1697.937) (-1698.252) (-1697.467) -- 0:01:04
      98000 -- (-1699.376) [-1698.415] (-1695.349) (-1695.907) * (-1696.631) (-1695.693) (-1698.148) [-1695.425] -- 0:01:04
      98500 -- [-1699.189] (-1696.807) (-1696.099) (-1695.716) * (-1694.469) (-1698.776) (-1695.610) [-1694.420] -- 0:01:04
      99000 -- (-1696.706) (-1695.589) (-1702.799) [-1696.153] * (-1696.715) (-1696.646) [-1697.614] (-1697.108) -- 0:01:03
      99500 -- (-1696.128) (-1695.635) (-1697.822) [-1698.259] * (-1696.566) (-1697.156) [-1695.348] (-1700.304) -- 0:01:03
      100000 -- [-1696.099] (-1696.889) (-1695.459) (-1697.076) * (-1698.443) (-1697.712) [-1694.548] (-1700.082) -- 0:01:02

      Average standard deviation of split frequencies: 0.027762

      100500 -- [-1695.445] (-1693.999) (-1695.727) (-1698.202) * (-1694.952) (-1703.029) (-1696.182) [-1698.692] -- 0:01:02
      101000 -- (-1697.085) (-1698.189) [-1698.628] (-1699.724) * (-1700.205) [-1697.116] (-1694.959) (-1695.836) -- 0:01:02
      101500 -- [-1696.705] (-1699.839) (-1698.231) (-1699.612) * (-1698.404) [-1699.741] (-1698.095) (-1699.928) -- 0:01:01
      102000 -- [-1696.594] (-1695.015) (-1697.345) (-1700.196) * (-1698.961) [-1696.788] (-1700.502) (-1697.569) -- 0:01:01
      102500 -- (-1699.567) (-1698.786) (-1695.588) [-1697.310] * [-1698.787] (-1696.112) (-1698.332) (-1700.829) -- 0:01:01
      103000 -- [-1696.242] (-1698.576) (-1696.437) (-1696.821) * (-1696.640) [-1698.092] (-1696.914) (-1703.783) -- 0:01:00
      103500 -- [-1695.426] (-1696.410) (-1697.010) (-1696.831) * [-1697.229] (-1697.417) (-1695.945) (-1696.603) -- 0:01:00
      104000 -- (-1697.530) (-1697.125) (-1696.068) [-1696.600] * (-1698.054) (-1695.740) [-1696.352] (-1696.181) -- 0:01:00
      104500 -- (-1697.459) (-1696.426) (-1695.889) [-1697.007] * [-1695.980] (-1695.411) (-1698.362) (-1696.844) -- 0:00:59
      105000 -- (-1698.648) [-1696.914] (-1695.931) (-1696.794) * [-1695.039] (-1696.553) (-1698.858) (-1703.372) -- 0:00:59

      Average standard deviation of split frequencies: 0.020405

      105500 -- [-1696.142] (-1703.183) (-1699.526) (-1697.424) * (-1696.403) [-1697.013] (-1699.148) (-1696.321) -- 0:00:59
      106000 -- [-1696.843] (-1697.236) (-1699.554) (-1699.504) * (-1696.999) [-1696.229] (-1698.136) (-1696.057) -- 0:00:59
      106500 -- (-1698.622) [-1695.849] (-1696.194) (-1701.108) * (-1697.334) (-1696.349) (-1697.023) [-1693.098] -- 0:00:58
      107000 -- [-1697.491] (-1699.117) (-1696.101) (-1704.439) * (-1696.538) [-1696.829] (-1699.831) (-1696.478) -- 0:00:58
      107500 -- (-1695.983) (-1702.873) [-1696.246] (-1698.808) * (-1697.571) [-1695.663] (-1698.477) (-1696.963) -- 0:00:58
      108000 -- (-1695.826) (-1696.194) (-1696.338) [-1699.984] * [-1696.675] (-1697.341) (-1697.830) (-1695.774) -- 0:00:57
      108500 -- (-1696.814) (-1694.156) [-1697.956] (-1698.883) * (-1696.314) (-1694.324) (-1697.783) [-1704.086] -- 0:00:57
      109000 -- [-1695.816] (-1699.639) (-1696.448) (-1696.942) * (-1697.950) [-1694.310] (-1698.364) (-1693.018) -- 0:00:57
      109500 -- (-1695.596) (-1692.582) [-1697.688] (-1696.644) * (-1698.212) [-1695.868] (-1695.772) (-1696.618) -- 0:00:56
      110000 -- (-1699.215) [-1696.229] (-1697.531) (-1697.524) * (-1700.882) [-1696.567] (-1699.573) (-1696.697) -- 0:01:04

      Average standard deviation of split frequencies: 0.021048

      110500 -- (-1698.125) (-1695.850) (-1697.409) [-1699.681] * (-1696.217) [-1694.839] (-1699.094) (-1695.874) -- 0:01:04
      111000 -- (-1697.574) (-1695.314) [-1697.315] (-1697.541) * (-1696.279) (-1696.668) (-1699.494) [-1695.771] -- 0:01:04
      111500 -- (-1699.568) (-1699.367) [-1695.210] (-1698.014) * (-1699.150) (-1697.628) [-1696.092] (-1694.682) -- 0:01:03
      112000 -- (-1703.384) (-1695.351) [-1696.798] (-1698.307) * (-1698.575) (-1697.581) (-1697.653) [-1694.511] -- 0:01:03
      112500 -- (-1701.056) (-1693.717) [-1694.457] (-1698.889) * (-1696.349) [-1702.323] (-1698.636) (-1694.411) -- 0:01:03
      113000 -- (-1696.435) (-1698.279) (-1696.477) [-1693.557] * (-1698.114) [-1699.092] (-1696.750) (-1697.511) -- 0:01:02
      113500 -- [-1696.677] (-1698.573) (-1699.792) (-1697.587) * (-1697.370) (-1698.199) (-1696.679) [-1694.382] -- 0:01:02
      114000 -- (-1698.919) (-1699.524) (-1698.892) [-1694.883] * (-1698.826) (-1697.153) [-1694.560] (-1696.406) -- 0:01:02
      114500 -- (-1697.670) (-1696.079) (-1700.253) [-1696.405] * (-1696.775) (-1698.861) (-1697.273) [-1695.077] -- 0:01:01
      115000 -- (-1697.965) (-1696.084) [-1694.630] (-1697.589) * (-1697.159) [-1697.233] (-1695.816) (-1697.224) -- 0:01:01

      Average standard deviation of split frequencies: 0.021843

      115500 -- (-1697.227) (-1696.653) (-1699.291) [-1695.363] * [-1697.618] (-1698.138) (-1696.998) (-1698.250) -- 0:01:01
      116000 -- [-1697.111] (-1698.812) (-1703.457) (-1698.523) * (-1701.966) [-1696.793] (-1697.940) (-1701.305) -- 0:01:00
      116500 -- (-1694.283) (-1699.540) [-1694.860] (-1696.903) * [-1697.233] (-1699.066) (-1697.707) (-1698.725) -- 0:01:00
      117000 -- (-1693.644) (-1697.239) [-1696.100] (-1695.651) * (-1698.178) (-1699.466) (-1696.708) [-1697.464] -- 0:01:00
      117500 -- (-1696.071) [-1697.317] (-1697.693) (-1696.299) * (-1700.305) [-1696.699] (-1696.454) (-1700.130) -- 0:01:00
      118000 -- (-1695.024) (-1696.304) (-1699.477) [-1695.414] * [-1696.774] (-1695.471) (-1699.648) (-1693.915) -- 0:00:59
      118500 -- (-1699.399) (-1697.471) [-1698.546] (-1698.038) * (-1695.957) [-1699.944] (-1697.550) (-1695.285) -- 0:00:59
      119000 -- (-1695.886) (-1699.104) (-1694.557) [-1697.326] * (-1698.014) (-1696.369) (-1698.002) [-1694.330] -- 0:00:59
      119500 -- [-1695.673] (-1699.990) (-1696.734) (-1696.559) * (-1696.898) [-1696.907] (-1701.111) (-1697.288) -- 0:00:58
      120000 -- [-1696.930] (-1700.756) (-1693.735) (-1697.740) * [-1698.600] (-1697.035) (-1697.999) (-1694.243) -- 0:00:58

      Average standard deviation of split frequencies: 0.016359

      120500 -- [-1695.800] (-1705.180) (-1697.367) (-1695.439) * (-1696.096) [-1697.346] (-1695.868) (-1693.278) -- 0:00:58
      121000 -- (-1698.304) (-1706.956) [-1701.399] (-1695.062) * (-1697.994) [-1696.579] (-1696.566) (-1695.900) -- 0:00:58
      121500 -- (-1696.055) (-1696.003) (-1696.228) [-1696.161] * (-1697.762) (-1698.546) [-1697.183] (-1696.680) -- 0:00:57
      122000 -- (-1696.393) (-1698.909) (-1697.436) [-1695.018] * (-1702.077) [-1696.619] (-1699.274) (-1696.588) -- 0:00:57
      122500 -- (-1697.330) [-1698.724] (-1698.355) (-1696.265) * (-1696.272) (-1695.686) [-1696.255] (-1696.349) -- 0:00:57
      123000 -- [-1695.397] (-1699.171) (-1696.728) (-1696.132) * [-1694.251] (-1699.345) (-1696.716) (-1695.445) -- 0:00:57
      123500 -- (-1700.447) (-1704.135) (-1696.968) [-1695.515] * (-1696.429) (-1696.975) (-1696.475) [-1695.166] -- 0:00:56
      124000 -- (-1700.614) (-1704.642) (-1696.668) [-1693.890] * (-1696.242) [-1694.717] (-1696.519) (-1699.120) -- 0:01:03
      124500 -- (-1701.167) (-1697.346) [-1698.522] (-1697.022) * (-1695.384) (-1695.653) [-1695.715] (-1697.204) -- 0:01:03
      125000 -- (-1699.678) (-1698.858) (-1695.860) [-1698.423] * (-1695.225) (-1696.052) [-1698.783] (-1695.107) -- 0:01:03

      Average standard deviation of split frequencies: 0.017537

      125500 -- [-1695.210] (-1699.519) (-1700.620) (-1696.831) * (-1696.761) (-1695.964) (-1696.711) [-1695.697] -- 0:01:02
      126000 -- (-1695.262) [-1701.923] (-1696.377) (-1696.066) * (-1699.635) (-1697.271) [-1697.188] (-1696.146) -- 0:01:02
      126500 -- [-1693.018] (-1696.952) (-1697.182) (-1696.516) * (-1699.712) (-1697.176) [-1695.728] (-1696.568) -- 0:01:02
      127000 -- (-1698.885) [-1697.716] (-1695.825) (-1698.038) * [-1697.623] (-1699.341) (-1696.481) (-1694.284) -- 0:01:01
      127500 -- (-1692.103) [-1694.186] (-1697.107) (-1696.208) * (-1698.390) (-1695.964) (-1697.171) [-1697.798] -- 0:01:01
      128000 -- (-1694.673) [-1694.199] (-1696.577) (-1697.388) * (-1700.058) [-1697.509] (-1698.068) (-1698.231) -- 0:01:01
      128500 -- (-1694.519) [-1696.764] (-1696.454) (-1696.872) * [-1698.036] (-1696.185) (-1696.836) (-1697.585) -- 0:01:01
      129000 -- [-1695.795] (-1692.477) (-1695.667) (-1698.055) * (-1698.295) (-1695.843) (-1697.074) [-1702.338] -- 0:01:00
      129500 -- (-1695.314) (-1695.812) [-1694.855] (-1698.905) * (-1696.933) (-1696.249) [-1699.869] (-1699.957) -- 0:01:00
      130000 -- (-1695.713) [-1694.195] (-1700.332) (-1697.902) * [-1694.670] (-1699.263) (-1699.111) (-1699.204) -- 0:01:00

      Average standard deviation of split frequencies: 0.015704

      130500 -- (-1696.170) [-1698.346] (-1696.414) (-1699.518) * (-1695.975) (-1695.776) (-1700.134) [-1696.178] -- 0:00:59
      131000 -- (-1693.067) (-1695.388) (-1697.293) [-1695.141] * (-1696.998) [-1696.203] (-1697.934) (-1694.651) -- 0:00:59
      131500 -- [-1692.489] (-1697.492) (-1696.506) (-1694.166) * [-1700.530] (-1695.363) (-1694.764) (-1694.331) -- 0:00:59
      132000 -- [-1694.548] (-1695.101) (-1693.176) (-1700.105) * (-1697.398) (-1697.895) [-1695.700] (-1694.278) -- 0:00:59
      132500 -- (-1695.489) (-1695.906) [-1695.002] (-1697.178) * [-1698.237] (-1697.841) (-1696.844) (-1696.507) -- 0:00:58
      133000 -- (-1698.913) [-1693.465] (-1694.958) (-1697.873) * (-1696.962) (-1697.806) [-1697.104] (-1698.854) -- 0:00:58
      133500 -- (-1698.045) [-1696.562] (-1695.879) (-1699.591) * (-1700.534) [-1695.902] (-1697.239) (-1700.149) -- 0:00:58
      134000 -- (-1694.526) (-1696.949) (-1697.290) [-1699.800] * (-1695.766) [-1695.863] (-1697.592) (-1697.024) -- 0:00:58
      134500 -- [-1694.864] (-1696.421) (-1697.463) (-1697.811) * [-1697.783] (-1696.683) (-1697.455) (-1697.033) -- 0:00:57
      135000 -- [-1697.170] (-1694.587) (-1695.694) (-1699.616) * (-1698.322) (-1700.326) [-1696.366] (-1695.898) -- 0:00:57

      Average standard deviation of split frequencies: 0.014477

      135500 -- [-1698.916] (-1697.482) (-1695.864) (-1698.732) * (-1697.876) [-1700.416] (-1696.473) (-1696.750) -- 0:00:57
      136000 -- (-1698.556) [-1695.827] (-1698.072) (-1697.158) * (-1694.852) [-1697.090] (-1696.051) (-1696.639) -- 0:00:57
      136500 -- (-1697.121) (-1698.486) (-1695.893) [-1697.040] * [-1696.900] (-1703.860) (-1695.982) (-1699.018) -- 0:00:56
      137000 -- [-1699.714] (-1696.570) (-1696.239) (-1699.323) * (-1696.529) (-1700.870) [-1696.632] (-1696.756) -- 0:00:56
      137500 -- (-1697.450) [-1694.038] (-1696.098) (-1700.222) * (-1699.909) [-1699.230] (-1695.633) (-1697.074) -- 0:00:56
      138000 -- (-1696.584) (-1696.777) (-1698.504) [-1696.240] * (-1699.289) (-1697.676) (-1700.479) [-1696.741] -- 0:00:56
      138500 -- [-1699.250] (-1696.402) (-1698.693) (-1697.248) * (-1698.064) (-1698.827) (-1698.711) [-1698.688] -- 0:01:02
      139000 -- (-1698.666) (-1697.530) (-1701.311) [-1697.309] * [-1697.832] (-1697.367) (-1699.464) (-1696.126) -- 0:01:01
      139500 -- (-1706.345) (-1696.074) (-1704.027) [-1696.372] * [-1697.487] (-1696.454) (-1698.349) (-1697.786) -- 0:01:01
      140000 -- (-1697.352) (-1695.100) (-1696.683) [-1697.326] * (-1697.474) (-1696.362) (-1699.530) [-1696.761] -- 0:01:01

      Average standard deviation of split frequencies: 0.014588

      140500 -- (-1697.257) [-1693.499] (-1696.585) (-1696.752) * (-1699.700) (-1697.107) (-1697.426) [-1699.188] -- 0:01:01
      141000 -- [-1693.574] (-1695.932) (-1698.009) (-1700.690) * (-1698.493) (-1697.525) (-1696.762) [-1697.486] -- 0:01:00
      141500 -- (-1697.081) (-1696.366) [-1697.436] (-1701.671) * (-1699.613) (-1697.685) (-1697.832) [-1695.440] -- 0:01:00
      142000 -- [-1698.751] (-1696.639) (-1697.531) (-1699.066) * (-1699.890) (-1696.607) [-1695.922] (-1699.999) -- 0:01:00
      142500 -- [-1697.950] (-1697.461) (-1696.029) (-1697.648) * (-1701.552) (-1701.883) (-1696.467) [-1694.845] -- 0:01:00
      143000 -- (-1694.586) (-1697.916) (-1694.331) [-1698.213] * (-1703.105) (-1697.071) (-1696.912) [-1694.365] -- 0:00:59
      143500 -- [-1693.493] (-1697.566) (-1696.804) (-1697.766) * (-1704.936) (-1699.427) (-1693.790) [-1695.918] -- 0:00:59
      144000 -- (-1697.163) [-1697.171] (-1695.429) (-1696.078) * (-1700.560) (-1697.346) (-1696.670) [-1694.772] -- 0:00:59
      144500 -- (-1700.697) [-1700.686] (-1696.549) (-1698.398) * [-1696.858] (-1697.759) (-1693.558) (-1695.205) -- 0:00:59
      145000 -- [-1697.884] (-1698.619) (-1699.622) (-1698.020) * (-1698.097) (-1696.132) [-1694.989] (-1698.311) -- 0:00:58

      Average standard deviation of split frequencies: 0.012377

      145500 -- (-1700.155) (-1699.978) (-1698.157) [-1696.409] * (-1698.087) (-1695.366) (-1697.758) [-1696.298] -- 0:00:58
      146000 -- (-1695.280) (-1701.574) (-1698.038) [-1693.121] * (-1699.002) [-1695.086] (-1696.726) (-1694.804) -- 0:00:58
      146500 -- (-1696.602) (-1697.461) (-1697.982) [-1693.804] * (-1698.824) (-1695.851) [-1696.680] (-1694.845) -- 0:00:58
      147000 -- (-1694.679) [-1697.860] (-1698.644) (-1697.058) * (-1698.712) (-1696.894) [-1698.819] (-1696.681) -- 0:00:58
      147500 -- (-1696.118) [-1700.828] (-1695.791) (-1694.921) * (-1695.145) [-1697.828] (-1698.911) (-1699.535) -- 0:00:57
      148000 -- (-1695.364) [-1696.985] (-1696.335) (-1696.652) * [-1696.192] (-1696.544) (-1697.329) (-1695.814) -- 0:00:57
      148500 -- (-1698.617) (-1699.436) (-1695.579) [-1692.659] * (-1695.224) (-1697.050) [-1696.612] (-1695.159) -- 0:00:57
      149000 -- [-1697.997] (-1698.158) (-1697.171) (-1696.864) * (-1697.233) (-1696.970) [-1696.395] (-1698.000) -- 0:00:57
      149500 -- (-1698.392) [-1698.839] (-1696.914) (-1695.402) * [-1697.211] (-1696.232) (-1696.866) (-1697.979) -- 0:00:56
      150000 -- (-1695.861) (-1697.026) (-1696.749) [-1694.050] * (-1697.749) [-1696.154] (-1696.603) (-1696.131) -- 0:00:56

      Average standard deviation of split frequencies: 0.012331

      150500 -- (-1697.571) (-1699.027) (-1700.195) [-1692.231] * (-1696.923) (-1697.784) [-1699.043] (-1695.646) -- 0:00:56
      151000 -- (-1698.938) (-1703.195) (-1700.419) [-1692.936] * (-1700.467) (-1696.837) (-1701.306) [-1695.418] -- 0:00:56
      151500 -- [-1698.794] (-1703.406) (-1698.358) (-1696.117) * (-1696.919) (-1696.045) (-1700.667) [-1695.555] -- 0:00:56
      152000 -- (-1697.097) [-1698.825] (-1699.276) (-1694.976) * [-1697.626] (-1696.588) (-1700.132) (-1699.513) -- 0:00:55
      152500 -- (-1699.309) (-1699.258) (-1695.750) [-1696.481] * (-1695.147) (-1698.658) (-1697.609) [-1697.742] -- 0:00:55
      153000 -- (-1697.545) [-1696.499] (-1697.057) (-1694.558) * (-1697.287) (-1696.388) [-1698.215] (-1697.970) -- 0:01:00
      153500 -- (-1695.939) (-1699.421) (-1696.119) [-1692.695] * (-1699.548) (-1698.472) (-1697.144) [-1693.736] -- 0:01:00
      154000 -- (-1696.983) [-1700.195] (-1696.644) (-1694.834) * (-1696.045) (-1695.020) [-1696.610] (-1697.364) -- 0:01:00
      154500 -- (-1700.264) (-1698.305) [-1696.122] (-1696.697) * (-1697.721) (-1695.500) [-1700.206] (-1697.841) -- 0:01:00
      155000 -- (-1696.963) (-1695.178) (-1695.881) [-1698.172] * (-1696.212) [-1697.045] (-1696.693) (-1697.525) -- 0:00:59

      Average standard deviation of split frequencies: 0.011898

      155500 -- (-1698.458) [-1697.849] (-1695.335) (-1699.197) * (-1696.594) [-1695.015] (-1696.159) (-1698.689) -- 0:00:59
      156000 -- (-1699.280) (-1696.572) [-1695.273] (-1696.821) * (-1699.876) (-1694.842) (-1697.171) [-1695.826] -- 0:00:59
      156500 -- (-1696.820) (-1697.365) [-1700.002] (-1696.538) * [-1698.547] (-1697.271) (-1698.200) (-1697.891) -- 0:00:59
      157000 -- (-1699.844) (-1701.726) (-1696.197) [-1697.847] * (-1700.278) [-1698.156] (-1698.101) (-1698.196) -- 0:00:59
      157500 -- (-1696.843) (-1700.423) (-1696.509) [-1701.458] * (-1698.850) [-1697.370] (-1696.495) (-1700.555) -- 0:00:58
      158000 -- (-1699.371) [-1697.199] (-1696.662) (-1701.232) * (-1698.044) (-1698.209) [-1697.856] (-1697.936) -- 0:00:58
      158500 -- (-1699.933) (-1696.516) (-1697.938) [-1696.913] * (-1699.318) [-1701.844] (-1696.253) (-1697.180) -- 0:00:58
      159000 -- (-1701.026) (-1698.953) [-1697.201] (-1702.730) * [-1696.233] (-1697.089) (-1696.947) (-1700.328) -- 0:00:58
      159500 -- (-1701.011) (-1699.479) (-1696.191) [-1697.082] * (-1697.048) (-1697.761) (-1699.299) [-1696.810] -- 0:00:57
      160000 -- (-1700.610) (-1697.923) (-1695.517) [-1695.721] * (-1697.190) (-1695.473) (-1703.260) [-1696.474] -- 0:00:57

      Average standard deviation of split frequencies: 0.011736

      160500 -- (-1698.512) (-1697.235) [-1695.739] (-1693.991) * (-1697.048) [-1695.859] (-1697.493) (-1697.182) -- 0:00:57
      161000 -- [-1698.691] (-1696.644) (-1696.417) (-1696.218) * (-1696.180) (-1696.603) (-1697.763) [-1698.803] -- 0:00:57
      161500 -- [-1697.746] (-1698.007) (-1697.223) (-1696.854) * (-1695.569) (-1696.142) (-1697.931) [-1698.436] -- 0:00:57
      162000 -- (-1696.043) (-1698.054) [-1696.426] (-1694.080) * [-1697.522] (-1697.815) (-1697.916) (-1697.426) -- 0:00:56
      162500 -- (-1698.332) (-1696.547) (-1694.904) [-1695.782] * (-1700.533) (-1698.529) (-1698.092) [-1696.275] -- 0:00:56
      163000 -- [-1694.858] (-1698.149) (-1694.548) (-1699.570) * (-1697.821) (-1699.709) (-1698.274) [-1697.200] -- 0:00:56
      163500 -- (-1695.843) (-1702.604) [-1693.309] (-1698.978) * [-1695.277] (-1700.485) (-1697.852) (-1696.184) -- 0:00:56
      164000 -- (-1694.769) (-1702.147) [-1693.981] (-1697.462) * (-1697.705) [-1694.616] (-1696.054) (-1696.410) -- 0:00:56
      164500 -- [-1698.514] (-1698.654) (-1696.138) (-1694.267) * (-1699.838) (-1694.148) [-1696.403] (-1697.884) -- 0:00:55
      165000 -- (-1697.223) (-1697.586) (-1695.274) [-1696.626] * (-1698.423) [-1693.686] (-1699.085) (-1697.609) -- 0:00:55

      Average standard deviation of split frequencies: 0.010413

      165500 -- [-1695.044] (-1697.644) (-1694.188) (-1697.529) * (-1697.102) [-1698.662] (-1700.936) (-1698.246) -- 0:00:55
      166000 -- (-1701.121) [-1697.852] (-1694.113) (-1697.982) * [-1696.036] (-1699.787) (-1702.709) (-1697.434) -- 0:00:55
      166500 -- [-1699.824] (-1696.748) (-1700.359) (-1701.441) * [-1696.045] (-1700.194) (-1700.952) (-1696.854) -- 0:00:55
      167000 -- (-1701.829) (-1696.346) [-1698.368] (-1695.672) * (-1697.311) [-1699.928] (-1696.376) (-1702.080) -- 0:00:54
      167500 -- (-1699.390) (-1696.910) [-1697.441] (-1696.195) * (-1696.138) (-1693.066) (-1696.027) [-1697.514] -- 0:00:54
      168000 -- (-1700.058) (-1697.275) (-1696.200) [-1698.692] * [-1697.485] (-1695.969) (-1696.721) (-1695.951) -- 0:00:59
      168500 -- (-1697.570) (-1697.981) (-1695.234) [-1697.911] * (-1697.056) (-1697.915) [-1701.043] (-1696.668) -- 0:00:59
      169000 -- (-1700.126) (-1698.049) (-1693.583) [-1697.526] * [-1697.783] (-1702.034) (-1696.614) (-1695.742) -- 0:00:59
      169500 -- (-1701.599) (-1697.177) (-1696.966) [-1696.723] * (-1697.643) (-1699.511) (-1695.716) [-1695.762] -- 0:00:58
      170000 -- (-1698.415) (-1697.484) [-1695.414] (-1697.881) * (-1697.988) (-1697.333) [-1694.191] (-1698.745) -- 0:00:58

      Average standard deviation of split frequencies: 0.009424

      170500 -- (-1700.756) [-1696.726] (-1699.157) (-1697.824) * (-1697.256) (-1698.738) [-1695.469] (-1698.866) -- 0:00:58
      171000 -- (-1701.836) (-1697.283) (-1696.575) [-1697.001] * (-1696.700) (-1696.027) [-1693.411] (-1698.201) -- 0:00:58
      171500 -- [-1698.368] (-1700.020) (-1698.449) (-1700.863) * (-1696.854) (-1699.029) [-1695.557] (-1697.917) -- 0:00:57
      172000 -- (-1693.514) (-1702.989) (-1697.315) [-1700.966] * [-1697.631] (-1697.325) (-1697.555) (-1700.429) -- 0:00:57
      172500 -- [-1696.589] (-1698.270) (-1698.014) (-1694.695) * (-1696.214) (-1697.260) [-1695.465] (-1698.905) -- 0:00:57
      173000 -- (-1698.924) (-1699.191) (-1698.388) [-1697.807] * (-1696.922) (-1697.111) [-1694.908] (-1697.410) -- 0:00:57
      173500 -- (-1697.153) [-1696.732] (-1700.008) (-1697.107) * (-1697.182) (-1698.176) [-1696.371] (-1695.497) -- 0:00:57
      174000 -- [-1697.023] (-1697.693) (-1697.170) (-1697.284) * (-1697.485) (-1698.669) [-1694.639] (-1697.553) -- 0:00:56
      174500 -- (-1700.037) (-1696.842) [-1700.150] (-1697.132) * (-1695.692) (-1695.922) [-1693.423] (-1696.696) -- 0:00:56
      175000 -- (-1696.880) (-1697.589) (-1700.484) [-1694.939] * (-1695.626) (-1696.659) (-1696.149) [-1696.116] -- 0:00:56

      Average standard deviation of split frequencies: 0.010241

      175500 -- [-1696.820] (-1700.012) (-1694.808) (-1698.934) * (-1695.347) [-1698.287] (-1698.008) (-1695.056) -- 0:00:56
      176000 -- (-1700.522) [-1700.157] (-1697.160) (-1695.644) * (-1695.750) (-1697.197) (-1698.702) [-1697.322] -- 0:00:56
      176500 -- (-1696.726) (-1701.058) [-1698.450] (-1695.789) * (-1695.969) [-1700.341] (-1699.037) (-1697.601) -- 0:00:55
      177000 -- (-1697.216) (-1694.663) [-1697.621] (-1698.053) * (-1697.130) [-1701.035] (-1697.206) (-1697.715) -- 0:00:55
      177500 -- [-1694.773] (-1701.167) (-1698.075) (-1697.688) * (-1696.430) (-1697.616) (-1697.450) [-1697.355] -- 0:00:55
      178000 -- (-1696.378) (-1696.329) [-1702.723] (-1699.182) * [-1698.227] (-1696.670) (-1698.439) (-1695.718) -- 0:00:55
      178500 -- [-1694.473] (-1695.994) (-1698.052) (-1693.884) * (-1696.544) (-1696.670) (-1696.128) [-1695.716] -- 0:00:55
      179000 -- (-1699.597) [-1695.425] (-1696.520) (-1697.949) * [-1694.455] (-1697.285) (-1701.303) (-1699.899) -- 0:00:55
      179500 -- [-1695.653] (-1697.500) (-1696.045) (-1696.706) * (-1696.611) (-1696.383) (-1695.911) [-1698.686] -- 0:00:54
      180000 -- (-1697.299) (-1693.526) [-1697.266] (-1698.716) * (-1697.428) (-1697.992) [-1698.371] (-1697.191) -- 0:00:54

      Average standard deviation of split frequencies: 0.010727

      180500 -- (-1696.322) [-1697.003] (-1698.796) (-1697.071) * (-1695.307) [-1696.128] (-1699.705) (-1697.018) -- 0:00:54
      181000 -- [-1694.674] (-1697.779) (-1698.368) (-1696.816) * [-1701.884] (-1697.163) (-1698.824) (-1696.521) -- 0:00:54
      181500 -- (-1699.416) [-1698.604] (-1698.363) (-1696.772) * (-1702.595) [-1695.007] (-1700.572) (-1696.872) -- 0:00:54
      182000 -- [-1693.180] (-1695.616) (-1695.719) (-1697.138) * (-1701.264) (-1701.745) (-1703.274) [-1697.246] -- 0:00:58
      182500 -- (-1697.067) [-1696.791] (-1696.158) (-1696.753) * [-1699.937] (-1700.032) (-1697.670) (-1694.343) -- 0:00:58
      183000 -- [-1696.199] (-1695.768) (-1696.203) (-1695.089) * [-1698.579] (-1694.141) (-1698.252) (-1695.311) -- 0:00:58
      183500 -- (-1696.821) (-1697.303) [-1695.746] (-1696.656) * [-1695.793] (-1697.352) (-1696.619) (-1698.055) -- 0:00:57
      184000 -- (-1698.143) (-1699.511) (-1697.527) [-1697.123] * (-1697.654) (-1702.190) (-1696.838) [-1698.323] -- 0:00:57
      184500 -- [-1694.545] (-1699.382) (-1697.844) (-1696.603) * [-1698.842] (-1696.127) (-1697.961) (-1693.412) -- 0:00:57
      185000 -- (-1693.754) (-1697.138) [-1699.380] (-1698.579) * (-1701.118) (-1696.162) (-1699.299) [-1699.128] -- 0:00:57

      Average standard deviation of split frequencies: 0.013799

      185500 -- [-1699.003] (-1697.268) (-1698.198) (-1700.427) * [-1698.170] (-1695.025) (-1697.182) (-1697.410) -- 0:00:57
      186000 -- (-1697.973) (-1697.917) (-1697.558) [-1696.407] * (-1698.929) (-1701.723) [-1696.845] (-1697.022) -- 0:00:56
      186500 -- (-1694.888) [-1696.405] (-1697.700) (-1696.141) * (-1697.268) (-1694.911) [-1696.731] (-1696.950) -- 0:00:56
      187000 -- (-1695.116) [-1696.136] (-1696.726) (-1697.101) * (-1695.563) [-1697.711] (-1697.099) (-1697.106) -- 0:00:56
      187500 -- (-1698.092) (-1696.881) [-1694.264] (-1696.713) * (-1698.271) [-1696.208] (-1697.899) (-1699.246) -- 0:00:56
      188000 -- (-1699.518) (-1696.000) [-1697.732] (-1696.471) * (-1698.617) [-1696.259] (-1698.205) (-1696.759) -- 0:00:56
      188500 -- [-1697.238] (-1694.893) (-1695.347) (-1696.976) * (-1696.506) [-1693.233] (-1697.151) (-1697.836) -- 0:00:55
      189000 -- (-1698.072) [-1697.222] (-1696.098) (-1698.074) * (-1698.102) (-1694.633) (-1696.379) [-1696.781] -- 0:00:55
      189500 -- (-1702.215) [-1695.596] (-1694.380) (-1697.366) * (-1696.174) [-1696.735] (-1697.330) (-1700.248) -- 0:00:55
      190000 -- (-1697.374) (-1696.415) (-1693.546) [-1697.520] * (-1694.625) (-1698.190) [-1696.791] (-1698.639) -- 0:00:55

      Average standard deviation of split frequencies: 0.011813

      190500 -- [-1696.989] (-1693.892) (-1698.477) (-1699.306) * (-1696.462) (-1695.824) (-1699.916) [-1698.514] -- 0:00:55
      191000 -- (-1700.039) [-1694.125] (-1694.721) (-1695.514) * (-1696.849) [-1696.354] (-1694.500) (-1701.045) -- 0:00:55
      191500 -- (-1697.296) (-1697.356) [-1695.108] (-1697.391) * [-1695.975] (-1699.760) (-1697.688) (-1698.127) -- 0:00:54
      192000 -- (-1696.215) [-1695.958] (-1694.909) (-1694.789) * (-1696.893) [-1699.801] (-1699.360) (-1696.920) -- 0:00:54
      192500 -- (-1698.712) (-1695.569) [-1697.398] (-1697.302) * (-1697.199) [-1702.706] (-1701.459) (-1695.976) -- 0:00:54
      193000 -- [-1697.580] (-1697.053) (-1696.989) (-1696.874) * (-1694.230) (-1695.572) (-1698.576) [-1696.306] -- 0:00:54
      193500 -- [-1697.268] (-1697.314) (-1699.619) (-1696.138) * [-1702.741] (-1695.943) (-1695.731) (-1696.013) -- 0:00:54
      194000 -- (-1697.046) (-1702.676) (-1697.242) [-1697.069] * (-1697.189) (-1696.621) (-1697.257) [-1695.467] -- 0:00:54
      194500 -- [-1696.255] (-1693.700) (-1697.848) (-1696.594) * (-1696.175) (-1696.155) [-1696.356] (-1695.459) -- 0:00:53
      195000 -- (-1698.803) (-1696.559) [-1696.761] (-1695.009) * [-1697.790] (-1700.125) (-1698.291) (-1697.270) -- 0:00:53

      Average standard deviation of split frequencies: 0.011090

      195500 -- (-1699.914) [-1696.680] (-1698.321) (-1695.140) * (-1708.698) [-1693.054] (-1697.151) (-1695.923) -- 0:00:53
      196000 -- (-1702.328) (-1696.932) (-1697.201) [-1696.239] * (-1697.784) (-1694.620) (-1697.553) [-1697.038] -- 0:00:57
      196500 -- (-1698.640) [-1697.246] (-1697.508) (-1699.073) * (-1697.370) (-1696.495) (-1694.371) [-1697.818] -- 0:00:57
      197000 -- (-1700.327) (-1698.458) [-1695.934] (-1696.660) * (-1694.437) [-1695.132] (-1695.940) (-1694.331) -- 0:00:57
      197500 -- [-1697.631] (-1696.720) (-1698.782) (-1696.689) * (-1695.844) (-1697.473) (-1696.041) [-1694.283] -- 0:00:56
      198000 -- (-1699.424) (-1699.770) [-1694.743] (-1697.614) * (-1700.340) (-1700.773) (-1698.396) [-1695.688] -- 0:00:56
      198500 -- (-1697.873) (-1694.688) (-1696.533) [-1695.995] * (-1696.799) [-1693.889] (-1699.539) (-1696.113) -- 0:00:56
      199000 -- (-1701.499) (-1695.820) (-1695.445) [-1695.663] * [-1697.117] (-1696.362) (-1696.421) (-1699.130) -- 0:00:56
      199500 -- [-1702.241] (-1696.204) (-1700.517) (-1695.840) * (-1698.482) [-1694.121] (-1699.733) (-1697.848) -- 0:00:56
      200000 -- (-1696.579) (-1697.902) (-1696.281) [-1695.815] * (-1697.832) (-1697.093) (-1697.574) [-1696.727] -- 0:00:55

      Average standard deviation of split frequencies: 0.012268

      200500 -- (-1696.168) (-1697.558) (-1698.516) [-1693.519] * (-1697.835) [-1697.239] (-1698.907) (-1694.589) -- 0:00:55
      201000 -- (-1698.778) [-1697.363] (-1696.000) (-1697.312) * (-1694.820) (-1697.007) (-1697.053) [-1695.750] -- 0:00:55
      201500 -- [-1697.164] (-1698.691) (-1694.954) (-1696.367) * [-1695.296] (-1695.527) (-1701.585) (-1697.971) -- 0:00:55
      202000 -- (-1697.199) (-1697.363) (-1694.546) [-1697.027] * [-1693.665] (-1692.228) (-1697.864) (-1693.108) -- 0:00:55
      202500 -- (-1705.904) (-1697.666) [-1694.915] (-1694.511) * (-1695.904) [-1694.218] (-1696.601) (-1693.501) -- 0:00:55
      203000 -- (-1694.283) (-1696.900) (-1696.569) [-1696.219] * (-1695.821) [-1695.934] (-1698.052) (-1694.049) -- 0:00:54
      203500 -- [-1696.081] (-1696.938) (-1696.633) (-1699.635) * (-1696.542) (-1695.741) (-1696.835) [-1695.876] -- 0:00:54
      204000 -- (-1696.236) (-1696.638) (-1696.648) [-1695.400] * (-1697.149) (-1695.980) [-1695.841] (-1696.028) -- 0:00:54
      204500 -- (-1695.636) [-1696.620] (-1694.797) (-1697.877) * (-1697.100) (-1694.794) [-1695.685] (-1703.834) -- 0:00:54
      205000 -- (-1695.926) (-1697.536) (-1696.727) [-1701.203] * (-1697.922) (-1698.108) (-1695.996) [-1697.591] -- 0:00:54

      Average standard deviation of split frequencies: 0.012078

      205500 -- (-1696.509) (-1701.286) (-1697.448) [-1696.185] * [-1699.624] (-1696.250) (-1701.528) (-1696.348) -- 0:00:54
      206000 -- [-1695.686] (-1696.969) (-1695.139) (-1695.421) * (-1698.413) (-1696.797) [-1699.150] (-1695.852) -- 0:00:53
      206500 -- (-1693.535) (-1697.855) [-1695.132] (-1697.745) * (-1697.872) (-1694.215) (-1694.996) [-1694.863] -- 0:00:53
      207000 -- (-1694.625) (-1697.033) (-1696.817) [-1697.177] * (-1699.219) [-1696.804] (-1697.267) (-1695.989) -- 0:00:53
      207500 -- (-1697.048) (-1697.656) (-1693.725) [-1695.362] * (-1696.588) (-1697.158) (-1696.190) [-1696.043] -- 0:00:53
      208000 -- [-1695.273] (-1696.311) (-1691.810) (-1697.893) * [-1696.590] (-1696.426) (-1697.131) (-1698.802) -- 0:00:53
      208500 -- (-1697.650) (-1695.418) [-1696.505] (-1698.763) * (-1697.333) (-1696.083) [-1695.651] (-1697.575) -- 0:00:53
      209000 -- (-1697.716) (-1698.248) [-1695.186]