--- EXPERIMENT NOTES --- EXPERIMENT PROPERTIES #Fri Jan 24 09:41:54 GMT 2020 codeml.models=0 1 2 7 8 mrbayes.mpich= mrbayes.ngen=1000000 tcoffee.alignMethod=MUSCLE tcoffee.params= tcoffee.maxSeqs=0 codeml.bin=codeml mrbayes.tburnin=2500 codeml.dir=/usr/bin/ input.sequences= mrbayes.pburnin=2500 mrbayes.bin=mb tcoffee.bin=t_coffee mrbayes.dir=/opt/mrbayes_3.2.2/src tcoffee.dir= tcoffee.minScore=3 input.fasta=/data/6res/ML1346/input.fasta input.names= mrbayes.params= codeml.params= --- PSRF SUMMARY Estimated marginal likelihoods for runs sampled in files "/data/6res/ML1346/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/data/6res/ML1346/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": (Use the harmonic mean for Bayes factor comparisons of models) (Values are saved to the file /data/6res/ML1346/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat) Run Arithmetic mean Harmonic mean -------------------------------------- 1 -4157.46 -4160.19 2 -4157.49 -4160.49 -------------------------------------- TOTAL -4157.48 -4160.35 -------------------------------------- Model parameter summaries over the runs sampled in files "/data/6res/ML1346/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/data/6res/ML1346/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": Summaries are based on a total of 3002 samples from 2 runs. Each run produced 2001 samples of which 1501 samples were included. Parameter summaries saved to file "/data/6res/ML1346/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat". 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+ ------------------------------------------------------------------------------------------------------ TL{all} 0.900685 0.090847 0.364756 1.499519 0.863318 1501.00 1501.00 1.000 r(A<->C){all} 0.180267 0.022262 0.000032 0.477042 0.143730 101.94 167.06 1.004 r(A<->G){all} 0.175160 0.020405 0.000103 0.451820 0.141442 230.28 264.32 1.000 r(A<->T){all} 0.167581 0.021302 0.000060 0.466206 0.126027 204.57 280.57 1.003 r(C<->G){all} 0.157400 0.018737 0.000018 0.436585 0.118158 227.94 272.05 1.000 r(C<->T){all} 0.155177 0.018660 0.000001 0.427704 0.115718 267.76 283.98 1.006 r(G<->T){all} 0.164415 0.019346 0.000122 0.454494 0.126444 145.94 179.47 1.001 pi(A){all} 0.184208 0.000052 0.170723 0.199037 0.184028 1046.65 1186.55 1.000 pi(C){all} 0.276281 0.000066 0.259169 0.291199 0.276255 1211.83 1266.19 1.000 pi(G){all} 0.322745 0.000069 0.306605 0.339419 0.322638 1014.85 1124.08 1.001 pi(T){all} 0.216766 0.000055 0.203145 0.232012 0.216752 912.06 1075.76 1.000 alpha{1,2} 0.431396 0.250206 0.000174 1.402269 0.261979 1303.93 1316.07 1.002 alpha{3} 0.468166 0.249561 0.000257 1.440341 0.309365 1401.68 1451.34 1.001 pinvar{all} 0.999518 0.000000 0.998477 1.000000 0.999704 962.16 978.54 1.001 ------------------------------------------------------------------------------------------------------ * Convergence diagnostic (ESS = Estimated Sample Size); min and avg values correspond to minimal and average ESS among runs. ESS value below 100 may indicate that the parameter is undersampled. + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge. Setting sumt conformat to Simple --- CODEML SUMMARY Model 1: NearlyNeutral -3988.660367 Model 2: PositiveSelection -3988.659846 Model 0: one-ratio -3988.660439 Model 7: beta -3988.659846 Model 8: beta&w>1 -3988.659846 Model 0 vs 1 1.4400000054592965E-4 Model 2 vs 1 0.0010419999998703133 Model 8 vs 7 0.0
>C1 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT HAoooooooooooooo >C2 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT HAoooooooooooooo >C3 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT HAoooooooooooooo >C4 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT HAoooooooooooooo >C5 MCHDVQAVKSQGAAVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT PGVRAELAGKHTHTHA >C6 MCHDVQAVKSQGAAVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT PGVRAELAGKHTHTHA CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=6, Len=1030 C1 --------------VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF C2 --------------VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF C3 --------------VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF C4 --------------VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF C5 MCHDVQAVKSQGAAVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF C6 MCHDVQAVKSQGAAVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF ************************************ C1 PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT C2 PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT C3 PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT C4 PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT C5 PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT C6 PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT ************************************************** C1 REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK C2 REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK C3 REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK C4 REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK C5 REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK C6 REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK ************************************************** C1 EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG C2 EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG C3 EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG C4 EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG C5 EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG C6 EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG ************************************************** C1 IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ C2 IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ C3 IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ C4 IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ C5 IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ C6 IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ ************************************************** C1 LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV C2 LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV C3 LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV C4 LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV C5 LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV C6 LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV ************************************************** C1 NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG C2 NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG C3 NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG C4 NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG C5 NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG C6 NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG ************************************************** C1 HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV C2 HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV C3 HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV C4 HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV C5 HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV C6 HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV ************************************************** C1 AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA C2 AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA C3 AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA C4 AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA C5 AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA C6 AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA ************************************************** C1 RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV C2 RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV C3 RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV C4 RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV C5 RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV C6 RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV ************************************************** C1 RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS C2 RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS C3 RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS C4 RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS C5 RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS C6 RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS ************************************************** C1 VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ C2 VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ C3 VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ C4 VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ C5 VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ C6 VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ ************************************************** C1 NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY C2 NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY C3 NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY C4 NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY C5 NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY C6 NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY ************************************************** C1 RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS C2 RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS C3 RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS C4 RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS C5 RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS C6 RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS ************************************************** C1 RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS C2 RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS C3 RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS C4 RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS C5 RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS C6 RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS ************************************************** C1 GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA C2 GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA C3 GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA C4 GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA C5 GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA C6 GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA ************************************************** C1 GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR C2 GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR C3 GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR C4 GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR C5 GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR C6 GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR ************************************************** C1 GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL C2 GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL C3 GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL C4 GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL C5 GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL C6 GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL ************************************************** C1 GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL C2 GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL C3 GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL C4 GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL C5 GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL C6 GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL ************************************************** C1 GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT C2 GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT C3 GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT C4 GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT C5 GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT C6 GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT ************************************************** C1 PGVRAELAGKHTHTHAoooooooooooooo C2 PGVRAELAGKHTHTHAoooooooooooooo C3 PGVRAELAGKHTHTHAoooooooooooooo C4 PGVRAELAGKHTHTHAoooooooooooooo C5 PGVRAELAGKHTHTHA-------------- C6 PGVRAELAGKHTHTHA-------------- **************** PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:09 - Revision 1613 - Build 432) -full_log S [0] -genepred_score S [0] nsd -run_name S [0] -mem_mode S [0] mem -extend D [1] 1 -extend_mode S [0] very_fast_triplet -max_n_pair D [0] 10 -seq_name_for_quadruplet S [0] all -compact S [0] default -clean S [0] no -do_self FL [0] 0 -do_normalise D [0] 1000 -template_file S [0] -setenv S [0] 0 -template_mode S [0] -flip D [0] 0 -remove_template_file D [0] 0 -profile_template_file S [0] -in S [0] -seq S [0] -aln S [0] -method_limits S [0] -method S [0] -lib S [0] -profile S [0] -profile1 S [0] -profile2 S [0] -pdb S [0] -relax_lib D [0] 1 -filter_lib D [0] 0 -shrink_lib D [0] 0 -out_lib W_F [0] no -out_lib_mode S [0] primary -lib_only D [0] 0 -outseqweight W_F [0] no -dpa FL [0] 0 -seq_source S [0] ANY -cosmetic_penalty D [0] 0 -gapopen D [0] 0 -gapext D [0] 0 -fgapopen D [0] 0 -fgapext D [0] 0 -nomatch D [0] 0 -newtree W_F [0] default -tree W_F [0] NO -usetree R_F [0] -tree_mode S [0] nj -distance_matrix_mode S [0] ktup -distance_matrix_sim_mode S [0] idmat_sim1 -quicktree FL [0] 0 -outfile W_F [0] default -maximise FL [1] 1 -output S [1] score_ascii html score_ascii -len D [0] 0 -infile R_F [1] input.prot.fasta.muscle_rs_0_0.fasta.aln -matrix S [0] default -tg_mode D [0] 1 -profile_mode S [0] cw_profile_profile -profile_comparison S [0] profile -dp_mode S [0] linked_pair_wise -ktuple D [0] 1 -ndiag D [0] 0 -diag_threshold D [0] 0 -diag_mode D [0] 0 -sim_matrix S [0] vasiliky -transform S [0] -extend_seq FL [0] 0 -outorder S [0] input -inorder S [0] aligned -seqnos S [0] off -case S [0] keep -cpu D [0] 0 -maxnseq D [0] 1000 -maxlen D [0] -1 -sample_dp D [0] 0 -weight S [0] default -seq_weight S [0] no -align FL [1] 1 -mocca FL [0] 0 -domain FL [0] 0 -start D [0] 0 -len D [0] 0 -scale D [0] 0 -mocca_interactive FL [0] 0 -method_evaluate_mode S [0] default -evaluate_mode S [1] t_coffee_fast -get_type FL [0] 0 -clean_aln D [0] 0 -clean_threshold D [1] 1 -clean_iteration D [1] 1 -clean_evaluate_mode S [0] t_coffee_fast -extend_matrix FL [0] 0 -prot_min_sim D [40] 40 -prot_max_sim D [90] 90 -prot_min_cov D [40] 40 -pdb_type S [0] d -pdb_min_sim D [35] 35 -pdb_max_sim D [100] 100 -pdb_min_cov D [50] 50 -pdb_blast_server W_F [0] EBI -blast W_F [0] -blast_server W_F [0] EBI -pdb_db W_F [0] pdb -protein_db W_F [0] uniprot -method_log W_F [0] no -struc_to_use S [0] -cache W_F [0] use -align_pdb_param_file W_F [0] no -align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble -external_aligner S [0] NO -msa_mode S [0] tree -master S [0] no -blast_nseq D [0] 0 -lalign_n_top D [0] 10 -iterate D [1] 0 -trim D [0] 0 -split D [0] 0 -trimfile S [0] default -split D [0] 0 -split_nseq_thres D [0] 0 -split_score_thres D [0] 0 -check_pdb_status D [0] 0 -clean_seq_name D [0] 0 -seq_to_keep S [0] -dpa_master_aln S [0] -dpa_maxnseq D [0] 0 -dpa_min_score1 D [0] -dpa_min_score2 D [0] -dpa_keep_tmpfile FL [0] 0 -dpa_debug D [0] 0 -multi_core S [0] templates_jobs_relax_msa_evaluate -n_core D [0] 0 -max_n_proc D [0] 0 -lib_list S [0] -prune_lib_mode S [0] 5 -tip S [0] none -rna_lib S [0] -no_warning D [0] 0 -run_local_script D [0] 0 -plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 6 SEQUENCES [PROTEIN] Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C1 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C2 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C3 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C4 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C5 Length 1016 type PROTEIN Struct Unchecked Input File input.prot.fasta.muscle_rs_0_0.fasta.aln Seq C6 Length 1016 type PROTEIN Struct Unchecked Multi Core Mode: 96 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [32480] Library Relaxation: Multi_proc [96] Relaxation Summary: [32480]--->[31436] UN-WEIGHTED MODE: EVERY SEQUENCE WEIGHTS 1 OUTPUT RESULTS #### File Type= MSA Format= score_ascii Name= input.prot.fasta.muscle_rs_0_0.fasta.score_ascii #### File Type= MSA Format= html Name= input.prot.fasta.muscle_rs_0_0.fasta.html #### File Type= MSA Format= score_ascii Name= input.prot.fasta.muscle_rs_0_0.fasta.score_ascii # Command Line: t_coffee -infile input.prot.fasta.muscle_rs_0_0.fasta.aln -output score_ascii -special_mode evaluate -evaluate_mode t_coffee_fast [PROGRAM:T-COFFEE] # T-COFFEE Memory Usage: Current= 29.700 Mb, Max= 31.815 Mb # Results Produced with T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:09 - Revision 1613 - Build 432) # T-COFFEE is available from http://www.tcoffee.org # Register on: https://groups.google.com/group/tcoffee/ FORMAT of file input.prot.fasta.muscle_rs_0_0.fasta.ipi_i.fasta Not Supported[FATAL:T-COFFEE] CLUSTAL W (1.83) multiple sequence alignment C1 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK C2 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK C3 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK C4 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK C5 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK C6 VDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSFPSPSQIVESVPMYK ************************************************** C1 LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL C2 LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL C3 LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL C4 LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL C5 LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL C6 LRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVTREEGAVGILHVRGL ************************************************** C1 DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ C2 DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ C3 DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ C4 DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ C5 DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ C6 DPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVKEVTGNDVHLVGYSQ ************************************************** C1 GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA C2 GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA C3 GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA C4 GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA C5 GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA C6 GGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMGIPPNFGVVLANFMA ************************************************** C1 DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR C2 DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR C3 DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR C4 DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR C5 DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR C6 DHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQLHNREALLSREQQR ************************************************** C1 RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV C2 RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV C3 RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV C4 RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV C5 RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV C6 RFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAVNGQMVTLTDITCPV ************************************************** C1 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS C2 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS C3 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS C4 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS C5 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS C6 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTGHFGLVVGSRAAQQS ************************************************** C1 WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS C2 WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS C3 WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS C4 WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS C5 WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS C6 WPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGVAISSRLAHGLGEVS ************************************************** C1 ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG C2 ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG C3 ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG C4 ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG C5 ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG C6 ETALALARGVADAIVAANRSVHTLAVETVRTLPRLARLGQLNDHTRISLG ************************************************** C1 RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV C2 RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV C3 RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV C4 RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV C5 RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV C6 RIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVVRGLIAVGVRQGDRV ************************************************** C1 GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA C2 GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA C3 GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA C4 GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA C5 GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA C6 GVLMETRPSALVAIAALSRLGAVAVMMRPDADLAASVRIGGATKILTDPA ************************************************** C1 NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV C2 NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV C3 NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV C4 NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV C5 NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV C6 NLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQNQVIDMEKIDPNAV ************************************************** C1 DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA C2 DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA C3 DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA C4 DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA C5 DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA C6 DLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNYRWAVSAFGTASTAA ************************************************** C1 LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ C2 LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ C3 LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ C4 LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ C5 LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ C6 LDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALSRGLCSNRFVHEVRQ ************************************************** C1 YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF C2 YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF C3 YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF C4 YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF C5 YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF C6 YGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGSGMPTGLWERVVEAF ************************************************** C1 APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL C2 APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL C3 APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL C4 APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL C5 APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL C6 APAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGAGHVELGAYDAEQDL ************************************************** C1 ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY C2 ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY C3 ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY C4 ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY C5 ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY C6 ILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKRGVFAPADTWIATEY ************************************************** C1 LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV C2 LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV C3 LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV C4 LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV C5 LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV C6 LLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDALGFITGVDLAATYSV ************************************************** C1 AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS C2 AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS C3 AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS C4 AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS C5 AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS C6 AVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGLGPDIVHVVPELTLS ************************************************** C1 ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT C2 ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT C3 ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT C4 ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT C5 ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT C6 ATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMTPGVRAELAGKHTHT ************************************************** C1 HA C2 HA C3 HA C4 HA C5 HA C6 HA ** FORMAT of file input.prot.fasta.muscle_rs_0_0.fasta.ipi_bs.fasta Not Supported[FATAL:T-COFFEE] input.prot.fasta.muscle_rs_0_0.fasta.aln I:93 S:99 BS:94 # TC_SIMILARITY_MATRIX_FORMAT_01 # SEQ_INDEX C1 0 # SEQ_INDEX C2 1 # SEQ_INDEX C3 2 # SEQ_INDEX C4 3 # SEQ_INDEX C5 4 # SEQ_INDEX C6 5 # PW_SEQ_DISTANCES BOT 0 1 100.00 C1 C2 100.00 TOP 1 0 100.00 C2 C1 100.00 BOT 0 2 100.00 C1 C3 100.00 TOP 2 0 100.00 C3 C1 100.00 BOT 0 3 100.00 C1 C4 100.00 TOP 3 0 100.00 C4 C1 100.00 BOT 0 4 100.00 C1 C5 100.00 TOP 4 0 100.00 C5 C1 100.00 BOT 0 5 100.00 C1 C6 100.00 TOP 5 0 100.00 C6 C1 100.00 BOT 1 2 100.00 C2 C3 100.00 TOP 2 1 100.00 C3 C2 100.00 BOT 1 3 100.00 C2 C4 100.00 TOP 3 1 100.00 C4 C2 100.00 BOT 1 4 100.00 C2 C5 100.00 TOP 4 1 100.00 C5 C2 100.00 BOT 1 5 100.00 C2 C6 100.00 TOP 5 1 100.00 C6 C2 100.00 BOT 2 3 100.00 C3 C4 100.00 TOP 3 2 100.00 C4 C3 100.00 BOT 2 4 100.00 C3 C5 100.00 TOP 4 2 100.00 C5 C3 100.00 BOT 2 5 100.00 C3 C6 100.00 TOP 5 2 100.00 C6 C3 100.00 BOT 3 4 100.00 C4 C5 100.00 TOP 4 3 100.00 C5 C4 100.00 BOT 3 5 100.00 C4 C6 100.00 TOP 5 3 100.00 C6 C4 100.00 BOT 4 5 100.00 C5 C6 100.00 TOP 5 4 100.00 C6 C5 100.00 AVG 0 C1 * 100.00 AVG 1 C2 * 100.00 AVG 2 C3 * 100.00 AVG 3 C4 * 100.00 AVG 4 C5 * 100.00 AVG 5 C6 * 100.00 TOT TOT * 100.00 CLUSTAL W (1.83) multiple sequence alignment C1 ------------------------------------------GTGGATCT C2 ------------------------------------------GTGGATCT C3 ------------------------------------------GTGGATCT C4 ------------------------------------------GTGGATCT C5 ATGTGCCATGATGTCCAAGCTGTCAAGAGTCAGGGAGCAGCAGTGGATCT C6 ATGTGCCATGATGTCCAAGCTGTCAAGAGTCAGGGAGCAGCAGTGGATCT ******** C1 CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC C2 CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC C3 CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC C4 CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC C5 CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC C6 CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC ************************************************** C1 AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT C2 AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT C3 AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT C4 AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT C5 AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT C6 AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT ************************************************** C1 CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG C2 CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG C3 CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG C4 CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG C5 CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG C6 CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG ************************************************** C1 GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG C2 GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG C3 GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG C4 GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG C5 GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG C6 GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG ************************************************** C1 TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC C2 TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC C3 TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC C4 TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC C5 TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC C6 TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC ************************************************** C1 CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG C2 CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG C3 CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG C4 CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG C5 CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG C6 CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG ************************************************** C1 GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA C2 GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA C3 GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA C4 GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA C5 GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA C6 GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA ************************************************** C1 ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG C2 ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG C3 ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG C4 ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG C5 ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG C6 ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG ************************************************** C1 GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT C2 GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT C3 GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT C4 GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT C5 GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT C6 GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT ************************************************** C1 GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA C2 GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA C3 GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA C4 GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA C5 GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA C6 GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA ************************************************** C1 TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT C2 TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT C3 TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT C4 TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT C5 TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT C6 TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT ************************************************** C1 ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT C2 ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT C3 ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT C4 ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT C5 ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT C6 ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT ************************************************** C1 CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA C2 CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA C3 CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA C4 CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA C5 CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA C6 CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA ************************************************** C1 TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG C2 TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG C3 TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG C4 TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG C5 TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG C6 TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG ************************************************** C1 CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT C2 CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT C3 CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT C4 CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT C5 CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT C6 CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT ************************************************** C1 TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC C2 TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC C3 TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC C4 TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC C5 TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC C6 TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC ************************************************** C1 TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC C2 TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC C3 TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC C4 TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC C5 TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC C6 TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC ************************************************** C1 AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT C2 AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT C3 AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT C4 AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT C5 AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT C6 AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT ************************************************** C1 CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA C2 CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA C3 CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA C4 CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA C5 CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA C6 CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA ************************************************** C1 GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA C2 GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA C3 GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA C4 GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA C5 GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA C6 GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA ************************************************** C1 CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC C2 CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC C3 CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC C4 CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC C5 CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC C6 CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC ************************************************** C1 CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA C2 CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA C3 CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA C4 CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA C5 CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA C6 CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA ************************************************** C1 ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC C2 ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC C3 ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC C4 ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC C5 ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC C6 ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC ************************************************** C1 GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC C2 GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC C3 GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC C4 GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC C5 GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC C6 GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC ************************************************** C1 GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT C2 GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT C3 GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT C4 GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT C5 GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT C6 GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT ************************************************** C1 CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT C2 CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT C3 CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT C4 CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT C5 CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT C6 CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT ************************************************** C1 CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT C2 CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT C3 CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT C4 CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT C5 CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT C6 CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT ************************************************** C1 CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG C2 CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG C3 CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG C4 CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG C5 CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG C6 CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG ************************************************** C1 GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC C2 GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC C3 GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC C4 GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC C5 GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC C6 GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC ************************************************** C1 CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT C2 CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT C3 CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT C4 CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT C5 CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT C6 CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT ************************************************** C1 GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC C2 GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC C3 GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC C4 GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC C5 GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC C6 GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC ************************************************** C1 TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG C2 TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG C3 TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG C4 TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG C5 TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG C6 TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG ************************************************** C1 GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG C2 GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG C3 GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG C4 GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG C5 GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG C6 GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG ************************************************** C1 CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG C2 CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG C3 CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG C4 CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG C5 CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG C6 CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG ************************************************** C1 GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA C2 GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA C3 GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA C4 GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA C5 GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA C6 GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA ************************************************** C1 AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC C2 AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC C3 AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC C4 AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC C5 AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC C6 AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC ************************************************** C1 GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG C2 GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG C3 GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG C4 GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG C5 GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG C6 GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG ************************************************** C1 CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC C2 CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC C3 CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC C4 CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC C5 CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC C6 CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC ************************************************** C1 CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG C2 CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG C3 CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG C4 CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG C5 CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG C6 CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG ************************************************** C1 CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC C2 CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC C3 CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC C4 CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC C5 CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC C6 CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC ************************************************** C1 TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG C2 TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG C3 TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG C4 TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG C5 TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG C6 TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG ************************************************** C1 CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT C2 CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT C3 CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT C4 CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT C5 CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT C6 CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT ************************************************** C1 CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC C2 CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC C3 CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC C4 CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC C5 CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC C6 CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC ************************************************** C1 CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA C2 CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA C3 CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA C4 CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA C5 CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA C6 CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA ************************************************** C1 GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC C2 GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC C3 GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC C4 GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC C5 GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC C6 GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC ************************************************** C1 TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA C2 TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA C3 TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA C4 TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA C5 TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA C6 TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA ************************************************** C1 ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT C2 ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT C3 ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT C4 ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT C5 ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT C6 ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT ************************************************** C1 GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA C2 GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA C3 GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA C4 GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA C5 GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA C6 GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA ************************************************** C1 AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC C2 AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC C3 AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC C4 AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC C5 AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC C6 AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC ************************************************** C1 TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC C2 TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC C3 TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC C4 TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC C5 TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC C6 TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC ************************************************** C1 GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG C2 GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG C3 GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG C4 GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG C5 GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG C6 GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG ************************************************** C1 CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG C2 CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG C3 CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG C4 CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG C5 CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG C6 CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG ************************************************** C1 TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC C2 TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC C3 TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC C4 TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC C5 TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC C6 TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC ************************************************** C1 GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA C2 GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA C3 GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA C4 GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA C5 GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA C6 GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA ************************************************** C1 TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA C2 TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA C3 TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA C4 TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA C5 TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA C6 TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA ************************************************** C1 TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG C2 TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG C3 TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG C4 TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG C5 TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG C6 TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG ************************************************** C1 GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA C2 GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA C3 GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA C4 GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA C5 GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA C6 GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA ************************************************** C1 TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC C2 TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC C3 TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC C4 TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC C5 TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC C6 TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC ************************************************** C1 GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT C2 GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT C3 GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT C4 GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT C5 GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT C6 GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT ************************************************** C1 CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- C2 CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- C3 CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- C4 CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- C5 CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- C6 CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- ************************************************ C1 ---------------------------------------- C2 ---------------------------------------- C3 ---------------------------------------- C4 ---------------------------------------- C5 ---------------------------------------- C6 ---------------------------------------- >C1 ------------------------------------------GTGGATCT CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- ---------------------------------------- >C2 ------------------------------------------GTGGATCT CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- ---------------------------------------- >C3 ------------------------------------------GTGGATCT CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- ---------------------------------------- >C4 ------------------------------------------GTGGATCT CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- ---------------------------------------- >C5 ATGTGCCATGATGTCCAAGCTGTCAAGAGTCAGGGAGCAGCAGTGGATCT CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- ---------------------------------------- >C6 ATGTGCCATGATGTCCAAGCTGTCAAGAGTCAGGGAGCAGCAGTGGATCT CAATTTTTCAATCGTCACACGACCAGTCGAGCGTCTGGTCGCTACGGCAC AAAATGGCCTGGAAGTTTTGCGGTTGGGGGGGTTAGAAACAGGCAGCTTT CCGTCACCGTCGCAGATTGTCGAGAGCGTGCCGATGTACAAGCTTCGACG GTACTTTCCGCCCGGTAACCGGCCTGGGCAACCGCTGTTGGGAGCGCCGG TGCTGATGGTGCACCCGATGATGATGTCGGCGGATATGTGGGACGTCACC CGGGAGGAGGGCGCGGTAGGCATCTTGCACGTCAGGGGGCTTGATCCCTG GGTCATCGACTTCGGCTCACCCGACAAAGTCGAGGGTGGAATGCGTCGGA ATCTGGCCGACCACATCGTGGCCCTCAGCGAAGCGGTCGATACTGTCAAG GAAGTCACCGGTAACGATGTGCACCTGGTTGGGTATTCACAGGGTGGCAT GTTCTGCTACCAAGCTGCCGCATACCGGCGTTCGGAGAACATCGCTAGCA TCGTGGCGTTCGGCTCCCCAGTTGACACTCTAGCCGCGCTTCCCATGGGT ATTCCACCAAACTTCGGCGTGGTACTTGCCAATTTTATGGCTGATCACGT CTTCAATCGCTTGGATATCCCAAGCTGGTTGGCGCGTGCCGGTTTTCAGA TGTTAGATCCGCTCAAGACGGTCAAAGCCCGGGTCGACTTCGTGCGTCAG CTGCACAATCGTGAAGCTTTGCTGTCGCGTGAACAGCAGCGCCGATTCCT TGAATCCGAAGGGTGGATCGCGTGGTCGGGTCCAGCAATTTCCGAGCTAC TTAAGCAGTTCATTGCGCACAATCGAATGATGACGGGCGGTTTTGCTGTC AACGGGCAGATGGTGACGTTAACTGACATCACCTGCCCGGTGCTGGCTTT CGTCGGCGAGGTTGACGACATCGGTCAGCCAGCGTCAGTGCGAGGCATTA GACGCGCAGCACCCAACGCCGAGGTCTACGAGTCTCTGATCCGGACAGGA CATTTCGGCCTGGTCGTGGGATCCAGGGCGGCGCAGCAGAGTTGGCCGAC CGTCGCCGAATGGGTATGCTGGTTAGCCGCTAATGCTAACAAGCCGGCGA ATATCCATATTATGCCGGATCAGCCGGTCGAACACACCGCCAGTGGCGTC GCGATTAGTTCTCGGCTCGCGCACGGACTGGGGGAGGTCTCCGAGACGGC GTTGGCGCTGGCTCGTGGCGTGGCCGATGCGATTGTGGCTGCCAACAGAT CCGTTCATACGTTGGCTGTGGAGACAGTCCGGACGTTACCACGTTTGGCT CGGCTCGGACAGCTCAATGACCACACTCGGATCTCGCTAGGCCGTATTAT CGGCGAACAAGCTCACGATGCCCCACGGGGTGAGTTCCTGTTGTTCGACG GACGTGTGCATACTTACGAGGCTGTCGACCGGCGAGTCAACAACGTCGTC CGAGGTCTGATCGCGGTCGGGGTGCGGCAGGGTGACCGCGTAGGTGTGCT GATGGAAACTCGTCCCAGCGCACTGGTCGCCATTGCAGCACTGTCTCGGC TGGGTGCGGTTGCCGTGATGATGAGGCCAGATGCCGATCTGGCCGCATCG GTCCGAATCGGGGGAGCGACGAAGATCTTGACTGACCCCGCCAATCTTGG CGTAGTACTTGCTTACGGTCGCCAGTTGACTGGTCAGGTACTGGTGTTGG GTGGCGGTGAGTCACGTGATCTGCACCTGCCGGAGGACGCCTTGCAGCAA AACCAAGTCATCGACATGGAAAAGATCGACCCGAATGCCGTCGACCTGCC GGCCTGGTATCGGCCCAACTCGGGATTGGCTCGGGATCTGGCGTTCATCG CGTGCAGCACGGTCGGCGGCGAGTTGGTAGCTAAGCAGATCACTAACTAC CGATGGGCGGTCTCAGCTTTCGGAACTGCCTCAACAGCCGCTCTCGATCG CAGGGACACAGTGTATTGCTTGACGCCGCTGCATCACGAGTCCGCGCTGC TGGTAAGCCTGGGCGGTGCGGTCGTTGGTGGTGCTCGCATAGCGCTGTCG CGCGGTTTATGCTCGAACCGATTTGTGCACGAGGTGCGTCAATACGGCGT CACTGTTGTATCCTACACCTGGGCTATGCTGCGCGAACTTGTCGATGACC CGGCGTTTGTACTGCACGGCAACCATCCGGTGCGGCTGTTCATGGGCTCA GGCATGCCGACCGGCCTATGGGAGCGGGTCGTCGAAGCGTTCGCGCCCGC TCATGTTGTCGAATTTTTCGCTACGGTCGACGGACAAGCTGTACTGGCTA ACGTGTCGGGTGCGAAGATTGGTAGCAAGGGTCGTCCGCTGCCCGGCGCT GGGCATGTCGAGTTGGGTGCTTACGACGCCGAACAGGACTTGATCCTGGA AAACGACCGCGGTTTCGTACAGGTCGCCGACGTCAACCAGATTGGTGTGC TACTCGCTGCGTCCCGCGGGCCGATCGATCCGACTGCGTCTGTCAAACGC GGTGTTTTTGCTCCGGCTGACACCTGGATAGCAACCGAGTACTTGTTACG CCGCGACTACGATGGAGACTATTGGCTGGCGGGGCGGCGTAGCTCGGTGG TTCGCACCGCACGCGGATTGGTTTATACTGAACCAGTGACCGACGCGCTC GGCTTCATCACTGGGGTCGACCTCGCTGCGACCTACAGTGTGGCGGTGGA TGATCGTGAGTTGGCGGTGTCGGCGGTGACACTGTTGCCCGGAGCGGCCA TAACGGCGGCCGACTTGACCGAAGCCGTTGCCAGCATGCCCGTCGGACTG GGGCCCGACATTGTGCACGTGGTACCAGAGCTAACGCTCAGCGCCACCTA TCGTCCAATCGTCGGTGCCCTGCGCACGGCCGGGATTCCTAAAACGGGGC GCCAGGTATGGTATTTCGATTCCGCAAGTAATCAATTCAGGCGGATGACT CCCGGGGTGCGGGCGGAGCTAGCAGGCAAACACACGCACACCCATGCT-- ---------------------------------------- >C1 ooooooooooooooVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT PGVRAELAGKHTHTHA >C2 ooooooooooooooVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT PGVRAELAGKHTHTHA >C3 ooooooooooooooVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT PGVRAELAGKHTHTHA >C4 ooooooooooooooVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT PGVRAELAGKHTHTHA >C5 MCHDVQAVKSQGAAVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT PGVRAELAGKHTHTHA >C6 MCHDVQAVKSQGAAVDLNFSIVTRPVERLVATAQNGLEVLRLGGLETGSF PSPSQIVESVPMYKLRRYFPPGNRPGQPLLGAPVLMVHPMMMSADMWDVT REEGAVGILHVRGLDPWVIDFGSPDKVEGGMRRNLADHIVALSEAVDTVK EVTGNDVHLVGYSQGGMFCYQAAAYRRSENIASIVAFGSPVDTLAALPMG IPPNFGVVLANFMADHVFNRLDIPSWLARAGFQMLDPLKTVKARVDFVRQ LHNREALLSREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAV NGQMVTLTDITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRTG HFGLVVGSRAAQQSWPTVAEWVCWLAANANKPANIHIMPDQPVEHTASGV AISSRLAHGLGEVSETALALARGVADAIVAANRSVHTLAVETVRTLPRLA RLGQLNDHTRISLGRIIGEQAHDAPRGEFLLFDGRVHTYEAVDRRVNNVV RGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVMMRPDADLAAS VRIGGATKILTDPANLGVVLAYGRQLTGQVLVLGGGESRDLHLPEDALQQ NQVIDMEKIDPNAVDLPAWYRPNSGLARDLAFIACSTVGGELVAKQITNY RWAVSAFGTASTAALDRRDTVYCLTPLHHESALLVSLGGAVVGGARIALS RGLCSNRFVHEVRQYGVTVVSYTWAMLRELVDDPAFVLHGNHPVRLFMGS GMPTGLWERVVEAFAPAHVVEFFATVDGQAVLANVSGAKIGSKGRPLPGA GHVELGAYDAEQDLILENDRGFVQVADVNQIGVLLAASRGPIDPTASVKR GVFAPADTWIATEYLLRRDYDGDYWLAGRRSSVVRTARGLVYTEPVTDAL GFITGVDLAATYSVAVDDRELAVSAVTLLPGAAITAADLTEAVASMPVGL GPDIVHVVPELTLSATYRPIVGALRTAGIPKTGRQVWYFDSASNQFRRMT PGVRAELAGKHTHTHA MrBayes v3.2.2 x64 (Bayesian Analysis of Phylogeny) Distributed under the GNU General Public License Type "help" or "help <command>" for information on the commands that are available. Type "about" for authorship and general information about the program. Executing file "/data/6res/ML1346/batch/allfiles/mrbayes/input.fasta.fasta.mrb" UNIX line termination Longest line length = 63 Parsing file Expecting NEXUS formatted file Reading data block Allocated taxon set Allocated matrix Defining new matrix with 6 taxa and 3090 characters Missing data coded as ? Data matrix is interleaved Data is Dna Gaps coded as - Matching characters coded as . Taxon 1 -> C1 Taxon 2 -> C2 Taxon 3 -> C3 Taxon 4 -> C4 Taxon 5 -> C5 Taxon 6 -> C6 Successfully read matrix Setting default partition (does not divide up characters) Setting model defaults Seed (for generating default start values) = 1579858800 Setting output file names to "/data/6res/ML1346/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run<i>.<p|t>" Exiting data block Reading mrbayes block Setting autoclose to yes Setting nowarnings to yes Defining charset called first_pos Defining charset called second_pos Defining charset called third_pos Defining partition called by_codon Setting by_codon as the partition, dividing characters into 3 parts. Setting model defaults Seed (for generating default start values) = 79249852 Setting Nst to 6 for partition 1 Setting Nst to 6 for partition 2 Setting Nst to 6 for partition 3 Setting Rates to Invgamma for partition 1 Setting Rates to Invgamma for partition 2 Setting Rates to Invgamma for partition 3 Successfully set likelihood model parameters to all applicable data partitions Unlinking Setting number of generations to 1000000 Running Markov chain MCMC stamp = 5150339959 Seed = 811061236 Swapseed = 1579858800 Model settings: Settings for partition 1 -- Datatype = DNA Nucmodel = 4by4 Nst = 6 Substitution rates, expressed as proportions of the rate sum, have a Dirichlet prior (1.00,1.00,1.00,1.00,1.00,1.00) Covarion = No # States = 4 State frequencies have a Dirichlet prior (1.00,1.00,1.00,1.00) Rates = Invgamma Gamma shape parameter is exponentially distributed with parameter (2.00). Proportion of invariable sites is uniformly dist- ributed on the interval (0.00,1.00). Gamma distribution is approximated using 4 categories. Likelihood summarized over all rate categories in each generation. Settings for partition 2 -- Datatype = DNA Nucmodel = 4by4 Nst = 6 Substitution rates, expressed as proportions of the rate sum, have a Dirichlet prior (1.00,1.00,1.00,1.00,1.00,1.00) Covarion = No # States = 4 State frequencies have a Dirichlet prior (1.00,1.00,1.00,1.00) Rates = Invgamma Gamma shape parameter is exponentially distributed with parameter (2.00). Proportion of invariable sites is uniformly dist- ributed on the interval (0.00,1.00). Gamma distribution is approximated using 4 categories. Likelihood summarized over all rate categories in each generation. Settings for partition 3 -- Datatype = DNA Nucmodel = 4by4 Nst = 6 Substitution rates, expressed as proportions of the rate sum, have a Dirichlet prior (1.00,1.00,1.00,1.00,1.00,1.00) Covarion = No # States = 4 State frequencies have a Dirichlet prior (1.00,1.00,1.00,1.00) Rates = Invgamma Gamma shape parameter is exponentially distributed with parameter (2.00). Proportion of invariable sites is uniformly dist- ributed on the interval (0.00,1.00). Gamma distribution is approximated using 4 categories. Likelihood summarized over all rate categories in each generation. Active parameters: Partition(s) Parameters 1 2 3 ------------------------ Revmat 1 1 1 Statefreq 2 2 2 Shape 3 3 4 Pinvar 5 5 5 Ratemultiplier 6 6 6 Topology 7 7 7 Brlens 8 8 8 ------------------------ Parameters can be linked or unlinked across partitions using 'link' and 'unlink' 1 -- Parameter = Revmat{all} Type = Rates of reversible rate matrix Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00) Partitions = All 2 -- Parameter = Pi{all} Type = Stationary state frequencies Prior = Dirichlet Partitions = All 3 -- Parameter = Alpha{1,2} Type = Shape of scaled gamma distribution of site rates Prior = Exponential(2.00) Partitions = 1 and 2 4 -- Parameter = Alpha{3} Type = Shape of scaled gamma distribution of site rates Prior = Exponential(2.00) Partition = 3 5 -- Parameter = Pinvar{all} Type = Proportion of invariable sites Prior = Uniform(0.00,1.00) Partitions = All 6 -- Parameter = Ratemultiplier{all} Type = Partition-specific rate multiplier Prior = Fixed(1.0) Partitions = All 7 -- Parameter = Tau{all} Type = Topology Prior = All topologies equally probable a priori Partitions = All Subparam. = V{all} 8 -- Parameter = V{all} Type = Branch lengths Prior = Unconstrained:Exponential(10.0) Partitions = All The MCMC sampler will use the following moves: With prob. Chain will use move 1.06 % Dirichlet(Revmat{all}) 1.06 % Slider(Revmat{all}) 1.06 % Dirichlet(Pi{all}) 1.06 % Slider(Pi{all}) 2.13 % Multiplier(Alpha{1,2}) 2.13 % Multiplier(Alpha{3}) 2.13 % Slider(Pinvar{all}) 10.64 % ExtSPR(Tau{all},V{all}) 10.64 % ExtTBR(Tau{all},V{all}) 10.64 % NNI(Tau{all},V{all}) 10.64 % ParsSPR(Tau{all},V{all}) 31.91 % Multiplier(V{all}) 10.64 % Nodeslider(V{all}) 4.26 % TLMultiplier(V{all}) Division 1 has 9 unique site patterns Division 2 has 9 unique site patterns Division 3 has 9 unique site patterns Initializing conditional likelihoods Using standard SSE likelihood calculator for division 1 (single-precision) Using standard SSE likelihood calculator for division 2 (single-precision) Using standard SSE likelihood calculator for division 3 (single-precision) Initializing invariable-site conditional likelihoods Initial log likelihoods and log prior probs for run 1: Chain 1 -- -6804.394640 -- -24.965149 Chain 2 -- -6801.063581 -- -24.965149 Chain 3 -- -6801.063968 -- -24.965149 Chain 4 -- -6797.537531 -- -24.965149 Initial log likelihoods and log prior probs for run 2: Chain 1 -- -6797.537923 -- -24.965149 Chain 2 -- -6797.537920 -- -24.965149 Chain 3 -- -6793.816428 -- -24.965149 Chain 4 -- -6801.062942 -- -24.965149 Using a relative burnin of 25.0 % for diagnostics Chain results (1000000 generations requested): 0 -- [-6804.395] (-6801.064) (-6801.064) (-6797.538) * [-6797.538] (-6797.538) (-6793.816) (-6801.063) 500 -- (-4178.474) (-4186.862) [-4170.644] (-4167.647) * (-4199.383) (-4234.383) (-4196.710) [-4213.484] -- 0:00:00 1000 -- [-4167.820] (-4171.128) (-4168.768) (-4171.799) * (-4177.482) [-4169.771] (-4182.509) (-4177.340) -- 0:16:39 1500 -- (-4166.772) [-4165.043] (-4164.166) (-4173.015) * (-4165.050) [-4166.223] (-4162.715) (-4173.371) -- 0:11:05 2000 -- (-4165.623) [-4166.527] (-4165.580) (-4163.170) * (-4168.708) (-4168.092) (-4171.013) [-4171.000] -- 0:08:19 2500 -- [-4168.374] (-4168.902) (-4163.126) (-4166.247) * [-4165.791] (-4169.744) (-4171.279) (-4168.977) -- 0:06:39 3000 -- (-4168.887) [-4162.972] (-4167.615) (-4164.242) * (-4161.132) (-4171.314) [-4161.889] (-4166.435) -- 0:05:32 3500 -- (-4171.318) (-4164.987) [-4166.599] (-4164.651) * (-4174.619) (-4171.235) [-4164.237] (-4171.341) -- 0:04:44 4000 -- (-4161.980) [-4160.175] (-4165.664) (-4169.163) * (-4167.675) [-4177.055] (-4169.867) (-4166.792) -- 0:04:09 4500 -- (-4170.251) (-4169.871) [-4166.989] (-4168.403) * (-4163.334) (-4167.499) (-4175.116) [-4163.764] -- 0:03:41 5000 -- (-4173.668) (-4170.890) (-4167.447) [-4166.496] * (-4162.742) (-4168.805) [-4172.641] (-4164.843) -- 0:03:19 Average standard deviation of split frequencies: 0.111304 5500 -- [-4168.115] (-4166.694) (-4168.285) (-4171.821) * (-4168.872) (-4166.922) (-4176.937) [-4169.274] -- 0:03:00 6000 -- (-4172.360) (-4167.325) (-4176.875) [-4168.456] * (-4167.522) (-4164.876) (-4171.138) [-4169.608] -- 0:02:45 6500 -- (-4167.717) (-4164.136) [-4162.979] (-4166.304) * (-4168.240) (-4161.006) (-4172.537) [-4166.943] -- 0:02:32 7000 -- (-4169.157) (-4168.510) [-4168.124] (-4166.387) * (-4162.783) [-4171.454] (-4170.045) (-4165.618) -- 0:02:21 7500 -- (-4168.595) (-4168.429) [-4165.688] (-4165.058) * (-4164.415) (-4163.392) (-4165.227) [-4177.873] -- 0:02:12 8000 -- [-4166.535] (-4165.402) (-4162.011) (-4168.228) * (-4168.783) (-4168.939) [-4168.594] (-4164.407) -- 0:02:04 8500 -- (-4166.234) (-4173.108) (-4168.204) [-4164.215] * (-4166.337) (-4164.765) [-4164.210] (-4168.215) -- 0:01:56 9000 -- [-4162.390] (-4166.318) (-4163.624) (-4169.045) * (-4176.078) (-4165.123) [-4161.050] (-4168.401) -- 0:01:50 9500 -- (-4164.988) (-4169.867) (-4163.743) [-4169.354] * (-4167.737) (-4171.830) [-4169.368] (-4167.579) -- 0:01:44 10000 -- (-4178.199) (-4168.434) [-4164.977] (-4168.051) * (-4166.617) [-4164.201] (-4169.791) (-4166.652) -- 0:01:39 Average standard deviation of split frequencies: 0.073657 10500 -- (-4170.598) [-4166.540] (-4165.507) (-4172.400) * (-4164.529) (-4164.786) [-4164.094] (-4164.770) -- 0:03:08 11000 -- (-4169.799) [-4165.728] (-4165.504) (-4169.326) * (-4165.784) (-4169.668) (-4169.005) [-4169.965] -- 0:02:59 11500 -- (-4171.478) (-4167.382) [-4165.548] (-4167.587) * [-4167.702] (-4165.724) (-4163.488) (-4162.292) -- 0:02:51 12000 -- (-4167.176) [-4169.908] (-4168.417) (-4167.113) * (-4163.946) (-4165.985) (-4168.564) [-4163.257] -- 0:02:44 12500 -- (-4165.586) (-4169.584) (-4179.473) [-4168.557] * (-4178.891) (-4164.517) [-4164.347] (-4169.587) -- 0:02:38 13000 -- (-4162.919) (-4171.107) [-4164.152] (-4169.003) * [-4161.796] (-4161.127) (-4164.991) (-4168.873) -- 0:02:31 13500 -- (-4167.422) (-4175.592) (-4168.526) [-4165.658] * (-4164.708) [-4164.590] (-4174.498) (-4170.349) -- 0:02:26 14000 -- (-4167.611) [-4164.880] (-4172.149) (-4165.771) * (-4160.308) [-4165.808] (-4170.534) (-4172.769) -- 0:02:20 14500 -- [-4162.077] (-4174.111) (-4172.043) (-4172.921) * [-4167.309] (-4169.284) (-4166.614) (-4165.716) -- 0:02:15 15000 -- (-4177.502) (-4169.276) (-4171.033) [-4167.972] * (-4171.385) [-4161.858] (-4165.819) (-4163.874) -- 0:02:11 Average standard deviation of split frequencies: 0.058926 15500 -- (-4169.626) (-4167.500) (-4167.787) [-4172.672] * [-4166.976] (-4161.501) (-4172.854) (-4168.294) -- 0:02:07 16000 -- (-4163.046) (-4164.958) [-4170.532] (-4166.581) * (-4169.221) (-4164.662) [-4169.606] (-4160.487) -- 0:02:03 16500 -- (-4162.478) [-4165.283] (-4167.301) (-4165.976) * (-4164.432) (-4161.290) [-4165.117] (-4164.097) -- 0:01:59 17000 -- (-4168.036) [-4166.533] (-4170.111) (-4167.229) * (-4164.578) [-4162.965] (-4169.692) (-4167.510) -- 0:01:55 17500 -- (-4169.413) (-4170.511) (-4167.622) [-4169.602] * (-4165.159) (-4174.871) (-4167.674) [-4161.265] -- 0:01:52 18000 -- (-4178.652) (-4162.791) [-4162.182] (-4162.908) * [-4168.069] (-4170.738) (-4169.053) (-4176.477) -- 0:01:49 18500 -- [-4169.372] (-4165.487) (-4164.900) (-4182.889) * [-4166.334] (-4166.135) (-4164.565) (-4177.146) -- 0:01:46 19000 -- (-4168.499) [-4168.668] (-4171.996) (-4172.259) * [-4161.839] (-4173.362) (-4167.690) (-4178.849) -- 0:01:43 19500 -- [-4167.409] (-4168.900) (-4162.514) (-4165.526) * [-4163.105] (-4174.806) (-4167.788) (-4161.280) -- 0:01:40 20000 -- (-4165.484) (-4167.975) [-4168.253] (-4174.031) * (-4166.655) (-4178.689) [-4164.106] (-4161.071) -- 0:01:38 Average standard deviation of split frequencies: 0.061227 20500 -- (-4164.075) [-4167.059] (-4162.236) (-4164.128) * (-4168.174) (-4174.633) (-4168.459) [-4160.261] -- 0:02:23 21000 -- (-4161.449) (-4170.235) (-4168.566) [-4163.652] * (-4164.707) [-4171.449] (-4179.516) (-4160.157) -- 0:02:19 21500 -- [-4171.643] (-4175.533) (-4163.440) (-4167.527) * (-4171.746) (-4173.638) [-4163.081] (-4159.534) -- 0:02:16 22000 -- [-4164.258] (-4174.041) (-4171.650) (-4172.135) * (-4170.173) (-4166.337) (-4165.002) [-4159.584] -- 0:02:13 22500 -- [-4163.133] (-4174.059) (-4164.386) (-4167.386) * (-4174.103) [-4168.151] (-4169.808) (-4160.172) -- 0:02:10 23000 -- (-4165.386) (-4165.483) (-4166.006) [-4167.792] * [-4161.753] (-4165.856) (-4163.790) (-4160.488) -- 0:02:07 23500 -- [-4169.032] (-4162.598) (-4168.357) (-4170.918) * (-4166.880) (-4164.608) (-4165.177) [-4159.641] -- 0:02:04 24000 -- [-4176.576] (-4170.236) (-4174.338) (-4165.750) * (-4168.498) [-4163.384] (-4164.757) (-4159.360) -- 0:02:02 24500 -- [-4161.359] (-4163.499) (-4161.260) (-4164.814) * [-4162.483] (-4170.892) (-4174.215) (-4159.195) -- 0:01:59 25000 -- (-4169.343) (-4164.006) (-4163.029) [-4171.866] * (-4161.852) (-4169.025) (-4173.242) [-4158.231] -- 0:01:57 Average standard deviation of split frequencies: 0.048624 25500 -- [-4162.718] (-4169.480) (-4162.028) (-4167.402) * (-4173.726) (-4177.531) (-4163.336) [-4161.018] -- 0:01:54 26000 -- [-4165.739] (-4168.770) (-4161.401) (-4167.234) * [-4166.951] (-4171.154) (-4182.678) (-4160.031) -- 0:01:52 26500 -- (-4177.021) (-4170.760) (-4159.755) [-4165.012] * (-4164.601) [-4171.804] (-4171.561) (-4160.751) -- 0:01:50 27000 -- (-4168.434) (-4165.941) (-4158.989) [-4167.483] * [-4163.067] (-4166.551) (-4167.621) (-4160.603) -- 0:01:48 27500 -- (-4170.062) (-4167.718) (-4159.283) [-4171.755] * [-4164.259] (-4170.746) (-4170.057) (-4157.622) -- 0:01:46 28000 -- (-4166.163) (-4167.988) [-4158.279] (-4171.645) * (-4164.877) [-4165.624] (-4171.104) (-4158.928) -- 0:01:44 28500 -- (-4163.707) [-4167.591] (-4158.785) (-4169.492) * (-4166.415) (-4173.080) (-4172.659) [-4159.882] -- 0:01:42 29000 -- (-4172.801) (-4166.754) [-4158.360] (-4170.380) * (-4178.623) (-4171.118) (-4168.660) [-4158.790] -- 0:01:40 29500 -- (-4172.204) (-4163.714) (-4157.891) [-4163.347] * [-4171.504] (-4162.959) (-4175.464) (-4158.530) -- 0:01:38 30000 -- [-4168.673] (-4169.511) (-4161.519) (-4164.960) * (-4165.192) (-4168.340) (-4168.773) [-4159.216] -- 0:02:09 Average standard deviation of split frequencies: 0.042456 30500 -- (-4164.612) [-4164.814] (-4161.909) (-4166.972) * (-416