--- EXPERIMENT NOTES --- EXPERIMENT PROPERTIES #Sun Feb 04 20:29:35 WET 2018 codeml.models=0 1 2 3 7 8 mrbayes.mpich= mrbayes.ngen=1000000 tcoffee.alignMethod=MUSCLE tcoffee.params= tcoffee.maxSeqs=0 codeml.bin=codeml mrbayes.tburnin=2500 codeml.dir=/usr/bin/ input.sequences= mrbayes.pburnin=2500 mrbayes.bin=mb tcoffee.bin=t_coffee mrbayes.dir=/usr/bin/ tcoffee.dir= tcoffee.minScore=3 input.fasta=/opt/ADOPS/HIV1_N1/NEF_1_4/input.fasta input.names= mrbayes.params= codeml.params= --- PSRF SUMMARY Estimated marginal likelihoods for runs sampled in files "/opt/ADOPS/HIV1_N1/NEF_1_4/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/HIV1_N1/NEF_1_4/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": (Use the harmonic mean for Bayes factor comparisons of models) (Values are saved to the file /opt/ADOPS/HIV1_N1/NEF_1_4/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat) Run Arithmetic mean Harmonic mean -------------------------------------- 1 -11003.14 -11044.47 2 -11004.25 -11047.19 -------------------------------------- TOTAL -11003.55 -11046.57 -------------------------------------- Model parameter summaries over the runs sampled in files "/opt/ADOPS/HIV1_N1/NEF_1_4/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/HIV1_N1/NEF_1_4/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": Summaries are based on a total of 3002 samples from 2 runs. Each run produced 2001 samples of which 1501 samples were included. Parameter summaries saved to file "/opt/ADOPS/HIV1_N1/NEF_1_4/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat". 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+ ------------------------------------------------------------------------------------------------------ TL{all} 5.398990 0.057488 4.940050 5.875821 5.392830 1258.40 1263.11 1.002 r(A<->C){all} 0.094237 0.000062 0.079464 0.109408 0.093767 667.93 799.09 1.000 r(A<->G){all} 0.300314 0.000374 0.260679 0.336836 0.300125 253.72 315.48 1.001 r(A<->T){all} 0.092620 0.000068 0.076826 0.108906 0.092242 645.50 713.88 1.002 r(C<->G){all} 0.075161 0.000065 0.060265 0.091464 0.074714 831.57 883.96 1.005 r(C<->T){all} 0.353088 0.000453 0.311562 0.394216 0.352857 303.20 334.67 1.001 r(G<->T){all} 0.084580 0.000080 0.068452 0.103030 0.084150 723.13 842.95 1.000 pi(A){all} 0.366497 0.000169 0.341865 0.392953 0.366229 570.50 723.27 1.001 pi(C){all} 0.223474 0.000130 0.201684 0.245430 0.223152 627.28 651.08 1.001 pi(G){all} 0.232642 0.000126 0.211702 0.254687 0.232525 566.94 633.63 1.000 pi(T){all} 0.177386 0.000096 0.158125 0.196669 0.177223 402.87 551.59 1.000 alpha{1,2} 0.501024 0.002667 0.411675 0.611492 0.496507 1086.36 1225.72 1.000 alpha{3} 2.179506 0.145342 1.451386 2.921407 2.152491 915.17 1126.05 1.000 pinvar{all} 0.081286 0.000716 0.028537 0.131705 0.080463 1005.53 1032.20 1.000 ------------------------------------------------------------------------------------------------------ * Convergence diagnostic (ESS = Estimated Sample Size); min and avg values correspond to minimal and average ESS among runs. ESS value below 100 may indicate that the parameter is undersampled. + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge. Setting sumt conformat to Simple --- CODEML SUMMARY Model 1: NearlyNeutral -9301.358836 Model 2: PositiveSelection -9276.12486 Model 0: one-ratio -9744.234647 Model 3: discrete -9258.466467 Model 7: beta -9271.499631 Model 8: beta&w>1 -9247.946496 Model 0 vs 1 885.7516219999998 Model 2 vs 1 50.46795199999906 Additional information for M1 vs M2: Naive Empirical Bayes (NEB) analysis Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: B.CA.x.BCCFE_NEF767.DQ484833_) Pr(w>1) post mean +- SE for w 10 A 1.000** 2.236 18 A 0.711 1.879 76 V 0.969* 2.197 93 W 0.760 1.939 111 Y 0.571 1.706 123 I 0.549 1.679 125 Y 0.720 1.890 141 E 0.917 2.133 165 M 0.999** 2.234 171 R 0.996** 2.231 177 M 0.925 2.143 181 K 0.997** 2.233 185 Y 0.530 1.655 Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118) Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: B.CA.x.BCCFE_NEF767.DQ484833_) Pr(w>1) post mean +- SE for w 10 A 1.000** 2.500 +- 0.022 18 A 0.572 1.858 +- 0.742 76 V 0.959* 2.439 +- 0.298 93 W 0.640 1.959 +- 0.720 125 Y 0.584 1.876 +- 0.739 141 E 0.841 2.262 +- 0.548 165 M 0.999** 2.498 +- 0.061 171 R 0.996** 2.494 +- 0.098 177 M 0.856 2.284 +- 0.527 181 K 0.997** 2.497 +- 0.078 Model 8 vs 7 47.10627000000022 Additional information for M7 vs M8: Naive Empirical Bayes (NEB) analysis Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: B.CA.x.BCCFE_NEF767.DQ484833_) Pr(w>1) post mean +- SE for w 10 A 1.000** 1.816 18 A 0.847 1.679 76 V 0.976* 1.794 93 W 0.869 1.699 111 Y 0.758 1.597 123 I 0.754 1.594 125 Y 0.849 1.680 141 E 0.953* 1.774 165 M 0.998** 1.814 171 R 0.996** 1.812 177 M 0.955* 1.776 181 K 0.997** 1.813 185 Y 0.730 1.571 Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118) Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: B.CA.x.BCCFE_NEF767.DQ484833_) Pr(w>1) post mean +- SE for w 3 G 0.575 1.226 +- 0.327 9 P 0.595 1.232 +- 0.337 10 A 1.000** 1.524 +- 0.155 18 A 0.927 1.468 +- 0.192 22 V 0.616 1.260 +- 0.311 76 V 0.983* 1.514 +- 0.169 93 W 0.935 1.475 +- 0.189 111 Y 0.894 1.443 +- 0.208 123 I 0.895 1.443 +- 0.204 125 Y 0.927 1.468 +- 0.192 141 E 0.974* 1.502 +- 0.161 147 C 0.675 1.292 +- 0.308 152 I 0.831 1.400 +- 0.225 154 Q 0.683 1.298 +- 0.305 160 E 0.517 1.193 +- 0.326 161 K 0.691 1.311 +- 0.287 165 M 0.998** 1.524 +- 0.156 167 K 0.605 1.252 +- 0.314 171 R 0.995** 1.522 +- 0.160 174 F 0.636 1.263 +- 0.323 177 M 0.975* 1.503 +- 0.161 181 K 0.996** 1.522 +- 0.158 185 Y 0.884 1.436 +- 0.211
>C1 MGGKWSKSSLVGWPAVRDRMRRAEPQAEPAAVGVGAASQDLEKHGAITSS NTAATNADCAWLEAQEDEEVGFPVKPQVPLRPMTYKAAVDLSHFLKEKGG LEGLTWSQNRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLV PLEQEQVEEATAGENNCLLHPISQHGMDDPEKEVLMWKFDSRLAFQHMAR EKHPEYYKDCooooooooooooo >C2 MGGKWSKQSLVGWPEVRERIRQTPPAAVGTGAVSQDLARHGAITSSNTVT NNPDLAWLEAQKEDSEVGFPVRPQVPLRPMTYKAAFDLGFFLKEKGGLDG LVYSKQRQDILDLWVYNTQGFFPDWQNYTPGPGTRSPLTFGWCFKLVPMD PAEVEEANKGENNSLLHPICQHGMEDGDGEVLVWRFDSNLARRHIARELH PEFYKDCoooooooooooooooo >C3 MGGKWSKSSIVGWPAVRERIRRTEPAAEGVGAASQDLDRHGALTSSNTAQ NNADCAWLQAQEEEEEVGFPVRPQVPLRPMTYKGAVDLSFFLKEKGGLEG LIWSQKRQDILDLWVYHTQGYFPDWQNYTPGPGGRYPLTFGWCFKLVPVD PREVEEANKGENQCLLHPLSQHGMEDEEREVLKWQFDSSLARRHLARKKH PEYYKDCoooooooooooooooo >C4 MGSKLSKSSIRGWPAVRERIRRAEPAEGMRRTEPAAEGVGAASRDLERHG ALTSSNTPSNNADCAWLQAQEENEDEVGFPVRPQVPLRPMTYKSAFDLGF FLKEKGGLDGLIYSKKRQEILDLWVYHTQGFFPDWQNYTPGPGVRYPLTF GWCFKLVPVDPSEVEEANEGENNCLMHPISLHGMEDEHKEVLKWQFDSQL ARRHMARELHPEFYKDCoooooo >C5 MGGKWSKSSLVGWPNVLERIRRTEPAAEGVGAASQDLDEHGALTTSNTVT NNAACAWLEAQEEEEEVGFPVRPQVPVRPMTYKAALDLSFFLKEKGGLEG LIYSKKRQDILDLWVYNTQGFFPDWQNYTPGPGTRYPLTFGWCFKLVPVD PREVEEANEGEGNCLLHPMSLHGMEDEEREVLRWKFDSHLAHRHVAREIH PEFYKDCoooooooooooooooo >C6 MGGKWSKSSIVGWPKVRERIRQTPPAAEGVGTVSQDLAKHGAVTSSNINN ADSVWLKAHEEDEEEVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLDGL VYSKKRQEILDLWVYNTQGYFPDWQNYTPGPGIRYPLCFGWCFKLVPVDP QEVEEDNKGENNCLLHPMSQHGAEDEDREVLIWKFDTALARRHIARELRP EFYKDCooooooooooooooooo >C7 MGGKWSKSSIVGWPAIRERMKRTDPAAEGVGAASRDLEKHGAITSSNTAQ TNPDCAWLAAQEEDEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEG LIWSQQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCFELVPVE PEKVEEVTEGENNCLLHPVCQHGMEDPEKEVLMWKFNSRLAFTHVAREKH PEFYKDCoooooooooooooooo >C8 MGGKWSKRRGTEWPAVRERMRRTEPAAEGVGAASRDLEKYGALTSSNTAA TNSDCAWLEAQEDEEVGFPVRPQVPLRPMTYKEAVDLSHFLKEKGGLEGL VWSQKRQDILDLWVYHTQGFFPDWQNYTPGPGIRLPLTFGWCFKLILLDK EQIEKANEGERNTLLHPMSQHGMDDPEREVLVWKFDSRLAFHHMAREKHP EFYKDCooooooooooooooooo >C9 MGSKWSKSSKEGWPQVREKIKQTPPAAEGVGAVSQDLDKHGAITSSNINN AACSWLGAQEEDEEEVGFPVRPQVPLRPMTFKGAFDLSFFLKEKGGLDGL IHSKRRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLCFGWCFKLVPVDP GEVEEDNKGENNCLLHPMSQHGIEDADREVLMWKFDSSLARKHIARELHP DYYKDCooooooooooooooooo >C10 MGGKWSKSKVAGWTRIRERMRRAEPAAEPAADGVGPASRDLERHGAITSS NTASNNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEQGG LEGLVYSQRRQEILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLV PVDPDQVEKANEGENNCLLHPMSQHGMEDSEREVLVWKFDSRLAFHHIAR EKHPEYYKDCooooooooooooo >C11 MGGKWSKSSIVGWPEIRERLRRTPTARRTPTAAAGVGAVSQDLDRHGAVT SSNVNHPSNAWLEAQEEEEVGFPVRPQVPLRPMTYKGSSRSQPLFKRKGG TGRVSFSRKRQEILDLWTYNTQGYFPDWQNYTPGPGIRYPLTFGWCFKLV PVDPSEVEKANEGENNSLLHPMSQHGMDDEERETLIWVFDSRLAFKHMAR ELHPEFYKDCooooooooooooo >C12 MGGKWSKLRGWQAVRERMRRTGTTEPAATGVGAVSRDLEQRGAVTSSNTN SADCVWLEAQEDEEVGFPVRPQVPLRPMTYKGALDLSHFLKEQGGLDGLI HSPKRQEILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPADPE QVERVTEGENNCLLHPLNQHGIDDPEREVLVWKFDSRLAFHHMARELHPE FYKDCoooooooooooooooooo >C13 MGGKWSKGCMAGWPSVRERMERAEPAADGVGAVSRDLGRHGAITSSNTAN DACVWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLREKGGLEGLIY SQKRQEILDLWVYHTQGFFPDWHNYTPGPGIRYPLTFGWCFKLVPVDPEQ VEEANKEENNCLLHPMSQHGTDDPEREVLMWKFDSRLAFHHMAREKHPEF YKDCooooooooooooooooooo >C14 MGGKWSKRLGGWPTVRERMRRVEPAADGVGAVSRDLEKHGAITSNNTAAT NADCAWLEAQEDEEVGFPVKPQVPLRPMTYKAAVDLSHFLKEEGGLEGLI YSQRRQDILDLWVHHTQGFFPDWQNYTPGPGVRYPITFGWCFKLVPVEPE KIEEANEGENNSLLHPMSTHGMDDPEGEVLMWKFDSRLAFHHMARELHPE YYKNCoooooooooooooooooo >C15 MGGKWSKSSIVGWPAVRERMKRAEPTEPAAAGVGAASRDLEKHGALTSSN TAANNAACAWLEAQEDEEVGFPVRPQVPLRPMTPRAARDLSHFLKEKGGL EGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLCFGWCFKLVP VEPDKVEEATEGENNSLLHPISLHGMDDPEGEVLQWKFDSRLAFHHLAKE LHPEYFKDCoooooooooooooo >C16 MGGKWSKSSLVGWPAVRERMRRTPVAEKVGTAAEGVGTASQDLDKHGALT TSNTASNNAACAWLEAQEEGGGEEVGFPVRPQVPLRPMTYKAAFDLGFFL KEKGGLDGLIYSKKRQEILDLWVYNTQGFFPDWQNYTPGPGVRYPLTFGW CYKLVPVDPKEVEEANEGENNSLLHPMSLHGMEDEEGEVLRWKFDSSLAR RHLARELHPEWYKDooooooooo >C17 MGGKWSKSSIVGWPAVRERIRKTEPAAEGVGAASQDLDKYGALTSNNTPT TNADCAWLQAQEEAEEVGFPVTLQVPLRPMTYKGAFDLSFFLKEKGGLEG LIYSKKRQDTLDLWVYHTQGFFPDWQNYTPGPGVRLPLTFGWCFKLVPVD PREVEEANEGENNCLLHPMSQHGMEDEEREVLKWEFDSSLARRHLARELH PEYYKDCoooooooooooooooo >C18 MGGKWSKSSIVGWPDVRERMRRTTPAAEGVGAVSQDLDKHGALTINNSVT TNADCAWLEAQEEEGDVGFPVRPQVPLRPMTYKAAFDLSFFLKEKGGLDG LIYSKKRQEILDLWVYHTQGFFPDWQCYTPGPGVRYPLTFGWCYKLVPVD PVEVEEANKGENNCLLHPISQHGIEDEDREVLKWQFDSSLARKHLAREIH PEYYKDCoooooooooooooooo >C19 MGGKWSKNSAVGWARVRERMRRAEPAAEPAAEPAADGVGAVSRDLEKHGA ITSSNTAANNPDCAWVEAQEEEEEVGFPVRPQVPLRPMTYKGALDLSHFL KEKGGLEGLVHSQRRQDILDLWIYNTQGYFPDWQNYTPGPGIRYPLTFGW CFKLVPVEPEKVEEANEGENNSLLHPMSLHGMDDPEKEVLVWRFDSRLAF HHVARELHPEYYKDCoooooooo >C20 MGGKWSKSSIVGWPAVRERIRRTESAAEGVGAASQDLDKYGALTISNTAH NNADCAWLEAQEEEEEVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLDG LIYSKKRQEILDLWVYNTQGFFPDWQNYTPGPGVRYPLTFGWCYKLVPVD PREVEEANKGENNCLLHPMSQHGIEDEDREVLRWQFDSSLARRHLAREKH PEFYKDCoooooooooooooooo >C21 MGGKWSKRSVVGWPAVRERMRRTELAAEPAADGVGAVSRDLERHGAITSS NTAATNAACAWLEAQEEEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGG LEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLV PVEPEKIEEATEGEDNCLLHPMSQHGMDDPEKEVLVWRFDSHLAFRYMAR ELHPEYYKNCooooooooooooo >C22 MGGKWSKSSSVGWPAIRERMRRTAPGRTEPAAVGVGAASRDLERHGAITS SNTAATNAACAWVEAQEEEEEVGFPVKPQVPLRPMTYKGAVDLSHFLKEK GGLEGLIHSQQRQDILDLWVYNTQGYFPDWQNYTPGPGVRYPLTFGWCFK LVPVEPEKIEANERENSSLLHAASLHGMDDPEGEVLMWKFDSSLAFHHRA LELHPEYFKNooooooooooooo >C23 MGSKWSKCSPVGWRKVRERTRKAAPAAEGVGAASQDLDKYGALTSSNTPA NNPDCAWLEAQEEEEVGFPIRPQVPLRPMTYKAAVDLSFFLKEKGGLEGL IYLLRKGKRSLICGSITHKASYPDWQNYTPGPGVRHPLTFGWCFKLVPVD PKEVEENTAEENTSLMHPISLHGMEDAHGEVLMWKFDSQLARRHLARELH PEWYKDCoooooooooooooooo >C24 MGNKWSKSSIVGWPAVRERLRRARPRAERVEAAAEGVGAASQDLSNRGAI TSSNTRATNPDVAWLEAQEENEEEVGFPVRPQVPLRPMTYKAAMDLSHFL KEKGGLEGLIYSKKRQEILDLWVYHTQGYFPDWGNYTPGPGTRYPLTFGW CFKLVPVSPEEVEEATEGENNCLLHPMNQHGMDDEDREVLRWEFDSRLAF HHIAREKHPEFFNCooooooooo >C25 MGNKWSKSSIVGWPQVRERIRRTPPAAEGAAAEGVGAVSQDLDKHGAITS SNVNNAESVWLRAQEEDEEGVGFPVRPQVPLRPMTYKGAFDLSFFLKEKG GLDGLIYSKRRQEILDLWVYHTQGFFPDWHNYTPGPGTRFPLCFGWCFKL VPVDPKEVEEETKGENNCLLHPMNQHGIDDEHGEVLMWKFDSALARKHIA RELHPDYYKDCoooooooooooo >C26 MGGKWSKPRWGGWAAIRERMRRAEPESAADGVGAASRDLERYGALTSSNT AATNAACAWLEAQEDEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLE GLVHSQKRQDILDLWVYHTQGFFPDWDNYTPGPGTRYPLTFGWCFKLVPM DPDKVEEVTEGENNCLLHPINQHGMDDPEKEVLVWKFDSLLAFHHVAREI HPEYFKDCooooooooooooooo >C27 MGGKWSKSSLVGWPQVRERMRQTPPAATGVGAVSQDLDRHGAITSSNTPT TNAACAWLEAQEDEEVGFPVKPQVPLRPMTFKAAFDLSFFLKEKGGLDGL IYSKKRQEILDLWVYHTQGFFPDWQNYTPGPGTRYPLTFGWCFKLVPMDS AEVEKANEGENNSLLHPICQHGMEDEEREVLIWTFDRSLAVKHKARELHP EFYKDCooooooooooooooooo >C28 MGGKWSKCSIVGWPEIRERMRRTEPAAEGVGAASQDLDKYGALTSSNTAG TNADCAWLQAQEEEGEVGFPVRPQVPLRPMTYKGAFDLGFFLKEKGGLEG LIYSKKRQEILDLWVYNTQGYFPDWQNYTPGPGVRYPLTFGWCFKLVPVD PREVEEANEGDNNCLLHPMSQHGMEDEHKEVLKWQFDSSLARRHVARELH PEYYKDCoooooooooooooooo >C29 MGGKWSKSRVVGWPAVRDRMRRTEPAADGVGAVSRDLEKHGAITSSNTAA TNADCAWLEAQEDEEVGFPVTPQVPLRPMTYKGALDLSHFLKEKGGLEGM TWSQKRQDILDLWVHHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPLEP EEIEEANKGENNSLLHPMSQHGMDDPEKEVLVWKFDSRLAFHHMAREKHP EYYKDCooooooooooooooooo >C30 MGNKWSKSWPTIRDRMKRTNPAAERVEAAPQAAEGVGAASQDLDKYGALT SSNTAGNNADCAWLEAQEQDEDVGFPVRPQVPLRPMTFKGAFDLGWFLKE KGGLEGLIYSPKRQKILDLWVYHTQGYFPDWQNYTPGPGVRYPLTFGWPF KLVPVDPREVEEANKGENNCLLHPISQHGMEDEHGEVLMWKFDSQLTRRH LARELHPGFYKDCoooooooooo >C31 MGSKWSKSSIVGWPTVRERMRRTEPAAEGVGAASQDLDKYGALTSSNTAH NNADCAWLQAQEEEEGVGFPVRPQVPLRPMTYKGAVDLSFFLKEKGGLDG LIHSKKRQDILDLWVYHTQGYFPDWQNYTPGPGVRFPLTFGWCFKLVPVD PGEVEEDNKGENNCLLHPISLHGMEDEEREVLQWVFDSSLARRHMAREKH PEFYKDCoooooooooooooooo >C32 MGGKWSKRGVPGWDAIRERMRRTGHEPAAEGVGAVSRDLAQRGAITTSNT ASNNADCAWLEAQEDEEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLE GLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGVRFPLTFGWCFKLVPV EPDKVEEATEGENNCLLHPMNLHGMDDPEREVLMWKFDSRLAFHHMAREK HPEFYKDCooooooooooooooo >C33 MGGKWSKSSIVGWPRIRERMRRTEPAADGVGAVSRDLEKHGAITSSNTAE TNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSFFLKEKGGLEGL IYSRKRQEILDLWVYNTQGYFPDWHNYTPGPGIRFPLTFGWCFKLVPVDP REVEEANEGENNCLLHPVCQHGMDDEHGEVLMWKFDSHLAHKHRARELHP EFYKDCooooooooooooooooo >C34 MGSKWSKSSIVGWPNIMERMRRAEPAAEGVGAASQDLDKYGALTSSNTAH NNADCAWLQAQEEEGEVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLEG LIWSQKRQDILDLWVYNTQGYFPDWQNYTPGPGVRYPLTFGWCFKLVPVD PSEVEEASKGENNCLLHPMSLHGIEDADKEALIWKFDSSLAHRHLAREKH PGYYKDCoooooooooooooooo >C35 MGNKWSKSWPAVRDRMQRAEPAAEGVGAVSRDLEKYGAITSSNTAATNAD CAWLEAQEEEDVGFPVKPQVPLRPMTYKGAFDLGHFLKEKGGLDGLIWSQ ERQDILDLWVYHTQGFFPDWQNYTPGPGVRYPLTFGWPFKLVPVDPDKVE EINEGEDNCLLHPGSQHGMDDPEKEVLMWKFDSRLAFHHMAKEKHPEYYK DCooooooooooooooooooooo >C36 MGNKWSKSSTCGWPAVRERIRQTEPAAAEPAAEGVGAASQDLAKHGALTS SNTAHNNADCAWLQAQEEEEGVGFPVRPQVPVRPMTYKGAFDLSFFLKEK GGLDGLIWSPKRQEILDLWVYNTQGFFPDWQNYTPGPGIRLPLTFGWCFK LVPVDPSEVEEANKGENNCLLHPMSQHGIEDKEREVLMWKFDSNLARRHL AREKHPEYCKDCooooooooooo >C37 MGGKWSKNSIVGWSTVRERMRKTEPAAEGVGAASRDLDKHGALTSSNTTH NNADCAWLAAQEEDEEVGFPVRPQVPLRPMTYKGAFDLGFFLKEKGGLDG LIYSKKRQEILDLWVYHTQGYFPDWQNYTPGPGVRYPLTFGWCYKLVPVD PREVEEANKGENDCLLHPMSLHGMEDEHREVLKWQFDSSLARRHLAREIH PEYYKDCoooooooooooooooo >C38 MGGKWSQSSIVGWTQVRERIKRTPPAAEGVGAVSQDLDKHGAVTSSNMNN ADSIWLKAQEEEDEGVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLDGL IYSKKRQEILDLWVYHTQGFFPDWDNYTPGPGIRYPLCFGWCFKLVPVDS KEVEEDTKGENSCLLHPMSQHGVEDEEREVLMWKFDSALARRHLARELHP DYYKDCooooooooooooooooo >C39 MGGKWSKRSVVGWPAIRERMKRTPPAAAPGVGAVSQDLENRGAITSNNTS ANNPDLAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEG LIYSQQRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVE PDKVEEANEGENNSLLHPMSLHGMEDPEKEVLEWRFDSRLAFHHMARELH PEYYNNCoooooooooooooooo >C40 MGSKLSKSCTAGWPTVRERIRQAEPAAEGVGAASKDLDKHGALTSSNTAG TNADCAWLQAQEEEGEVGFPVRPQVPLRPMTYKSAFDLSFFLKEKGGLEG LIYSKKRQEILDLWVYHTQGFFPDWQNYTPGPGVRYPLTFGWCLKLVPVD PREVEEDNEGENNCLLHPMSQHGMEDADREVLRWKFDSHLARRHMARELH PEFYKDCoooooooooooooooo >C41 MGGKWSKSSIVGWPQIRERIRRTPPATEGVGAVSQDLDKHGAVTSSNMNN DDSVWLRAQEEEEEEVGFPVRPQVPLRPMTFKGAFDLSFFLKEKGGLNGL IYSKKRQEILDLWVYNTQGFFPDWQNYTPGPGVRYPLCFGWCFKLVPVDP RDVEEDNKGENNCLLHPMSQHGIEDEEREVLMWKFDSSLARRHIAREQHP EFYKDCooooooooooooooooo >C42 MGGKWSKSSIVGWPQIRERIRRTPPAAPGVGAVSQDLDKHGAITSSNVNH PSCTWVEAQEEEEVGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGLIY SRKRQEILDLWVYHTQGFFPDWHNYTPGPGIRFPLTFGWCFKLVPVDPDE VERATEGENNSLLHPICQHGMDDEEREVLKWQFDSRLAFTHQAREIHPEY YKDCooooooooooooooooooo >C43 MGGKWSKSSIVGWPAIRERIRRTNPAAERVGARESRTRTEPAAEGVGAAS RDLERHGALTSSNTRHTNPDCAWVEAQEEEEEVGFPVRPQVPLRPMTYKG ALDLSHFLREKGGLDGLIWSQRRQDILDLWIYNTQGYFPDWQNYTPGPGI RYPLTFGWCFQLVPVEPEEVERVTEGEDNCLLHPMNQHGMDDPEKEVLMW KFDSRLAFEHRARVKHPEFYKDC >C44 MGGKWSKSSIVGWPDVRERIRRAEPAAEGVGAASQDLDKYGALTNSNTPH NNADCAWLEAQEEGGEVGFPIRPQVPLRPMTYKGAFDLGFFLKEKGGLDG LIYSKKRQEILDLWVYHTQGFFPDWQNYTPGPGVRYPLTFGWPFKLVPVD PREVEEANKGENNCLLHPMSVHGMEDEEREVLRWQFDSSLVRRHLARELH PEYYKDCoooooooooooooooo >C45 MGGKWSKCSIVGWSEIRERIRRTPPAAVGVGAVSQDLAKHGAITSSNTAA NNPDCAWLEAQGEDSEVGFPVRPQVPLRPMTFKEAFDLSFFLKEKGGLDG LIYSKQRQDILDLWVYNTQGIFPDWQNYTPGPGTRFPLTFGWCFKLEPVD PAEVEEATKEENNSLLHPICQHGMEDADNEVLRWKFDSSLARRHIARELH PNFYKDCoooooooooooooooo >C46 MGGKWSKSSLVGWPEVRERMRQAPAAAKGVGEVSQDLEKHGAITSSNINH PSCVWLDAQQEEEVGFPVRPQVPLRPMTYKGAFDLSHFLREKGGLDGLIY SKKRQDILDLWVYNTQGFFPDWQNYTPGPGIRFPLTFGWCFKLVPVDPEE VEKATEGENNSLLHPLCQHGMDDEERETLRWEFDSRLALRHRAQELYPEF YKDCooooooooooooooooooo >C47 MGGKWSKSSIVGWPQVRERMRQTPPAATGVGAASQDLDKHGAITNSNTPG TNADCAWLEAQEEGEVGFPVKPQVPLRPMTYKGAVDFSHFLKEKGGLDGL IYSKKRQEILDLWVYHTQGYFPDWQCYTPGPGTRFPLTFGWCFKLVPMDP AEVEEANKGENNSLLHPICQHGMEDEDREVLVWKFDSHLAFKHTARELHP EYYKDCooooooooooooooooo >C48 MGGNWSKRGWPEIRERMRRAPPAAARAPSAAAPGVGAVSQDLAKHGAITS SNINNPSCVWLAAQEEQEEEVGFPVRPQVPLRPMTYKGAFDLSHFLKEKG GLEGLIYSKKRQEILDLWVYNTQGFFPDWQNYTPGPGVRYPLTFGWCFKL VPVDPDEVEKETEGENNSLLHPICQHGMDDEEGEVLKWTFDSRLALRHIA HEKHPEFYKDCoooooooooooo >C49 MGGKWSKRSMSGWPTVREKMRRAEPAAEPAAEGVGAASRDLERHGALTSS NTVTNNAACAWLEAQEDKEVGFPVRPQVPLRPMTHSAAIDLSHFLRKEGG LEGMIHSQRRQEILDLWVYHTQGFFPDWQNYTPGPGVRYPLCFGWCFKLV PVEPEEGENNTLLHPASLHGMDSEGEVLQWKFDSRLAFHHIAREMHPEYF KDCoooooooooooooooooooo >C50 MGGKWSKSSIVGWPAIRERMRQTEPAAEGVGAVSRDLEKHGAITSSNTAA TNADCAWLEAQEEEGEVGFPVKPQVPLRPMTFKGAFDLSFFLKEKGGLEG LIHSKRRQEILDLWVYHTQGYFPDWQNYTPGPGVRYPLTFGWCFKLVPVD PREVEEVNEGENNCLLHPVCQHGMEDEHREVLKWKFDSQLAHRHMARELH PEFYKDCoooooooooooooooo PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:09 - Revision 1613 - Build 432) -full_log S [0] -genepred_score S [0] nsd -run_name S [0] -mem_mode S [0] mem -extend D [1] 1 -extend_mode S [0] very_fast_triplet -max_n_pair D [0] 10 -seq_name_for_quadruplet S [0] all -compact S [0] default -clean S [0] no -do_self FL [0] 0 -do_normalise D [0] 1000 -template_file S [0] -setenv S [0] 0 -template_mode S [0] -flip D [0] 0 -remove_template_file D [0] 0 -profile_template_file S [0] -in S [0] -seq S [0] -aln S [0] -method_limits S [0] -method S [0] -lib S [0] -profile S [0] -profile1 S [0] -profile2 S [0] -pdb S [0] -relax_lib D [0] 1 -filter_lib D [0] 0 -shrink_lib D [0] 0 -out_lib W_F [0] no -out_lib_mode S [0] primary -lib_only D [0] 0 -outseqweight W_F [0] no -dpa FL [0] 0 -seq_source S [0] ANY -cosmetic_penalty D [0] 0 -gapopen D [0] 0 -gapext D [0] 0 -fgapopen D [0] 0 -fgapext D [0] 0 -nomatch D [0] 0 -newtree W_F [0] default -tree W_F [0] NO -usetree R_F [0] -tree_mode S [0] nj -distance_matrix_mode S [0] ktup -distance_matrix_sim_mode S [0] idmat_sim1 -quicktree FL [0] 0 -outfile W_F [0] default 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[0] 0 -run_local_script D [0] 0 -plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [804184] Library Relaxation: Multi_proc [8] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [804184] Library Relaxation: Multi_proc [8] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [804184] Library Relaxation: Multi_proc [8] [Relax Library][TOT= 6][ 0 %][ELAPSED TIME: 0 sec.] [Relax Library][TOT= 6][ 33 %][ELAPSED TIME: 0 sec.] [Relax Library][TOT= 6][ 50 %][ELAPSED TIME: 0 sec.] [Relax Library][TOT= 6][ 66 %][ELAPSED TIME: 0 sec.] [Relax Library][TOT= 6][ 83 %][ELAPSED TIME: 0 sec.] [Relax Library][TOT= 6][100 %][ELAPSED TIME: 0 sec.] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [804184] Library Relaxation: Multi_proc [8] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [804184] Library Relaxation: Multi_proc [8] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [804184] Library Relaxation: Multi_proc [8] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [804184] Library Relaxation: Multi_proc [8] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [804184] Library Relaxation: Multi_proc [8] -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.muscle_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 50 SEQUENCES [PROTEIN] Multi Core Mode: 8 processors: --- Process Method/Library/Aln Sinput.prot.fasta.muscle_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved Sinput.prot.fasta.muscle_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [804184] Library Relaxation: Multi_proc [8] Relaxation Summary: [804184]--->[573797] UN-WEIGHTED MODE: EVERY SEQUENCE WEIGHTS 1 OUTPUT RESULTS #### File Type= MSA Format= score_ascii Name= input.prot.fasta.muscle_rs_0_0.fasta.score_ascii #### File Type= MSA Format= html Name= input.prot.fasta.muscle_rs_0_0.fasta.html #### File Type= MSA Format= score_ascii Name= input.prot.fasta.muscle_rs_0_0.fasta.score_ascii # Command Line: t_coffee -infile input.prot.fasta.muscle_rs_0_0.fasta.aln -output score_ascii -special_mode evaluate -evaluate_mode t_coffee_fast [PROGRAM:T-COFFEE] # T-COFFEE Memory Usage: Current= 32.070 Mb, Max= 48.164 Mb # Results Produced with T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:09 - Revision 1613 - Build 432) # T-COFFEE is available from http://www.tcoffee.org # Register on: https://groups.google.com/group/tcoffee/ FORMAT of file input.prot.fasta.muscle_rs_0_0.fasta.ipi_i.fasta Not Supported[FATAL:T-COFFEE] CLUSTAL W (1.83) multiple sequence alignment C1 MGGKWSKWPAVRDRMRRAEAAVGVGAASQDLEKHGAITSSNTTNADCAWL C2 MGGKWSKWPEVRERIRQTPAAVGTGAVSQDLARHGAITSSNTNNPDLAWL C3 MGGKWSKWPAVRERIRRTEAAEGVGAASQDLDRHGALTSSNTNNADCAWL C4 MGSKLSKWPAVRERIRRAEAAEGVGAASRDLERHGALTSSNTNNADCAWL C5 MGGKWSKWPNVLERIRRTEAAEGVGAASQDLDEHGALTTSNTNNAACAWL C6 MGGKWSKWPKVRERIRQTPAAEGVGTVSQDLAKHGAVTSSNINNADSVWL C7 MGGKWSKWPAIRERMKRTDAAEGVGAASRDLEKHGAITSSNTTNPDCAWL C8 MGGKWSKWPAVRERMRRTEAAEGVGAASRDLEKYGALTSSNTTNSDCAWL C9 MGSKWSKWPQVREKIKQTPAAEGVGAVSQDLDKHGAITSSNINNAACSWL C10 MGGKWSKWTRIRERMRRAEAADGVGPASRDLERHGAITSSNTNNAACAWL C11 MGGKWSKWPEIRERLRRTPAAAGVGAVSQDLDRHGAVTSSNVNHPSNAWL C12 MGGKWSKWQAVRERMRRTEAATGVGAVSRDLEQRGAVTSSNTNSADCVWL C13 MGGKWSKWPSVRERMERAEAADGVGAVSRDLGRHGAITSSNTANDACVWL C14 MGGKWSKWPTVRERMRRVEAADGVGAVSRDLEKHGAITSNNTTNADCAWL C15 MGGKWSKWPAVRERMKRTEAAAGVGAASRDLEKHGALTSSNTNNAACAWL C16 MGGKWSKWPAVRERMRRTPAAEGVGTASQDLDKHGALTTSNTNNAACAWL C17 MGGKWSKWPAVRERIRKTEAAEGVGAASQDLDKYGALTSNNTTNADCAWL C18 MGGKWSKWPDVRERMRRTTAAEGVGAVSQDLDKHGALTINNSTNADCAWL C19 MGGKWSKWARVRERMRRAEAADGVGAVSRDLEKHGAITSSNTNNPDCAWV C20 MGGKWSKWPAVRERIRRTEAAEGVGAASQDLDKYGALTISNTNNADCAWL C21 MGGKWSKWPAVRERMRRAEAADGVGAVSRDLERHGAITSSNTTNAACAWL C22 MGGKWSKWPAIRERMRRTEAAVGVGAASRDLERHGAITSSNTTNAACAWV C23 MGSKWSKWRKVRERTRKAAAAEGVGAASQDLDKYGALTSSNTNNPDCAWL C24 MGNKWSKWPAVRERLRRVEAAEGVGAASQDLSNRGAITSSNTTNPDVAWL C25 MGNKWSKWPQVRERIRRTPAAEGVGAVSQDLDKHGAITSSNVNNAESVWL C26 MGGKWSKWAAIRERMRRAEAADGVGAASRDLERYGALTSSNTTNAACAWL C27 MGGKWSKWPQVRERMRQTPAATGVGAVSQDLDRHGAITSSNTTNAACAWL C28 MGGKWSKWPEIRERMRRTEAAEGVGAASQDLDKYGALTSSNTTNADCAWL C29 MGGKWSKWPAVRDRMRRTEAADGVGAVSRDLEKHGAITSSNTTNADCAWL C30 MGNKWSKWPTIRDRMKRTNAAEGVGAASQDLDKYGALTSSNTNNADCAWL C31 MGSKWSKWPTVRERMRRTEAAEGVGAASQDLDKYGALTSSNTNNADCAWL C32 MGGKWSKWDAIRERMRRHEAAEGVGAVSRDLAQRGAITTSNTNNADCAWL C33 MGGKWSKWPRIRERMRRTEAADGVGAVSRDLEKHGAITSSNTTNADCAWL C34 MGSKWSKWPNIMERMRRAEAAEGVGAASQDLDKYGALTSSNTNNADCAWL C35 MGNKWSKWPAVRDRMQRAEAAEGVGAVSRDLEKYGAITSSNTTNADCAWL C36 MGNKWSKWPAVRERIRQTEAAEGVGAASQDLAKHGALTSSNTNNADCAWL C37 MGGKWSKWSTVRERMRKTEAAEGVGAASRDLDKHGALTSSNTNNADCAWL C38 MGGKWSQWTQVRERIKRTPAAEGVGAVSQDLDKHGAVTSSNMNNADSIWL C39 MGGKWSKWPAIRERMKRTPAAPGVGAVSQDLENRGAITSNNTNNPDLAWL C40 MGSKLSKWPTVRERIRQAEAAEGVGAASKDLDKHGALTSSNTTNADCAWL C41 MGGKWSKWPQIRERIRRTPATEGVGAVSQDLDKHGAVTSSNMNNDDSVWL C42 MGGKWSKWPQIRERIRRTPAAPGVGAVSQDLDKHGAITSSNVNHPSCTWV C43 MGGKWSKWPAIRERIRRTEAAEGVGAASRDLERHGALTSSNTTNPDCAWV C44 MGGKWSKWPDVRERIRRAEAAEGVGAASQDLDKYGALTNSNTNNADCAWL C45 MGGKWSKWSEIRERIRRTPAAVGVGAVSQDLAKHGAITSSNTNNPDCAWL C46 MGGKWSKWPEVRERMRQAPAAKGVGEVSQDLEKHGAITSSNINHPSCVWL C47 MGGKWSKWPQVRERMRQTPAATGVGAASQDLDKHGAITNSNTTNADCAWL C48 MGGNWSKWPEIRERMRRAPAAPGVGAVSQDLAKHGAITSSNINNPSCVWL C49 MGGKWSKWPTVREKMRRAEAAEGVGAASRDLERHGALTSSNTNNAACAWL C50 MGGKWSKWPAIRERMRQTEAAEGVGAVSRDLEKHGAITSSNTTNADCAWL **.: *:* : :: .: *: *.* .*:** . **:* .* *: C1 EAQEDEVGFPVKPQVPLRPMTYKAAVDLSHFLKEKGGLEGLTWSQNRQDI C2 EAQEDEVGFPVRPQVPLRPMTYKAAFDLGFFLKEKGGLDGLVYSKQRQDI C3 QAQEEEVGFPVRPQVPLRPMTYKGAVDLSFFLKEKGGLEGLIWSQKRQDI C4 QAQENEVGFPVRPQVPLRPMTYKSAFDLGFFLKEKGGLDGLIYSKKRQEI C5 EAQEEEVGFPVRPQVPVRPMTYKAALDLSFFLKEKGGLEGLIYSKKRQDI C6 KAHEDEVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLDGLVYSKKRQEI C7 AAQEDEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGLIWSQQRQDI C8 EAQEDEVGFPVRPQVPLRPMTYKEAVDLSHFLKEKGGLEGLVWSQKRQDI C9 GAQEDEVGFPVRPQVPLRPMTFKGAFDLSFFLKEKGGLDGLIHSKRRQDI C10 EAQEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEQGGLEGLVYSQRRQEI C11 EAQEEEVGFPVRPQVPLRPMTYKGSSRSQPLFKRKGGTGRVSFSRKRQEI C12 EAQEDEVGFPVRPQVPLRPMTYKGALDLSHFLKEQGGLDGLIHSPKRQEI C13 EAQEEEVGFPVRPQVPLRPMTYKGALDLSHFLREKGGLEGLIYSQKRQEI C14 EAQEDEVGFPVKPQVPLRPMTYKAAVDLSHFLKEEGGLEGLIYSQRRQDI C15 EAQEDEVGFPVRPQVPLRPMTPRAARDLSHFLKEKGGLEGLIYSQKRQDI C16 EAQEGEVGFPVRPQVPLRPMTYKAAFDLGFFLKEKGGLDGLIYSKKRQEI C17 QAQEAEVGFPVTLQVPLRPMTYKGAFDLSFFLKEKGGLEGLIYSKKRQDT C18 EAQEEDVGFPVRPQVPLRPMTYKAAFDLSFFLKEKGGLDGLIYSKKRQEI C19 EAQEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGLVHSQRRQDI C20 EAQEEEVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLDGLIYSKKRQEI C21 EAQEEEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSQKRQDI C22 EAQEEEVGFPVKPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIHSQQRQDI C23 EAQEEEVGFPIRPQVPLRPMTYKAAVDLSFFLKEKGGLEGLIYRKGKRSL C24 EAQENEVGFPVRPQVPLRPMTYKAAMDLSHFLKEKGGLEGLIYSKKRQEI C25 RAQEDGVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLDGLIYSKRRQEI C26 EAQEDEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGLVHSQKRQDI C27 EAQDEEVGFPVKPQVPLRPMTFKAAFDLSFFLKEKGGLDGLIYSKKRQEI C28 QAQEEEVGFPVRPQVPLRPMTYKGAFDLGFFLKEKGGLEGLIYSKKRQEI C29 EAQEDEVGFPVTPQVPLRPMTYKGALDLSHFLKEKGGLEGMTWSQKRQDI C30 EAQQDDVGFPVRPQVPLRPMTFKGAFDLGWFLKEKGGLEGLIYSPKRQKI C31 QAQEEGVGFPVRPQVPLRPMTYKGAVDLSFFLKEKGGLDGLIHSKKRQDI C32 EAQEDEVGFPVRPQVPLRPMTFKGALDLSHFLKEKGGLEGLIYSQKRQDI C33 EAQEEEVGFPVRPQVPLRPMTYKGALDLSFFLKEKGGLEGLIYSRKRQEI C34 QAQEEEVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLEGLIWSQKRQDI C35 EAQEEDVGFPVKPQVPLRPMTYKGAFDLGHFLKEKGGLDGLIWSQERQDI C36 QAQEEGVGFPVRPQVPVRPMTYKGAFDLSFFLKEKGGLDGLIWSPKRQEI C37 AAQEDEVGFPVRPQVPLRPMTYKGAFDLGFFLKEKGGLDGLIYSKKRQEI C38 KAQEEGVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLDGLIYSKKRQEI C39 EAQEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGLIYSQQRQDI C40 QAQEEEVGFPVRPQVPLRPMTYKSAFDLSFFLKEKGGLEGLIYSKKRQEI C41 RAQEEEVGFPVRPQVPLRPMTFKGAFDLSFFLKEKGGLNGLIYSKKRQEI C42 EAQEEEVGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGLIYSRKRQEI C43 EAQEEEVGFPVRPQVPLRPMTYKGALDLSHFLREKGGLDGLIWSQRRQDI C44 EAQEGEVGFPIRPQVPLRPMTYKGAFDLGFFLKEKGGLDGLIYSKKRQEI C45 EAQEDEVGFPVRPQVPLRPMTFKEAFDLSFFLKEKGGLDGLIYSKQRQDI C46 DAQEEEVGFPVRPQVPLRPMTYKGAFDLSHFLREKGGLDGLIYSKKRQDI C47 EAQEGEVGFPVKPQVPLRPMTYKGAVDFSHFLKEKGGLDGLIYSKKRQEI C48 AAQEQEVGFPVRPQVPLRPMTYKGAFDLSHFLKEKGGLEGLIYSKKRQEI C49 EAQEDEVGFPVRPQVPLRPMTHSAAIDLSHFLRKEGGLEGMIHSQRRQEI C50 EAQEEEVGFPVKPQVPLRPMTFKGAFDLSFFLKEKGGLEGLIHSKRRQEI *:: ****: ***:**** : :::.:** : ::. C1 LDLWVYHTQGYPDWQNYTPGPGIRYPLTFGWCFKLVPLEQEQGENNCLLH C2 LDLWVYNTQGFPDWQNYTPGPGTRSPLTFGWCFKLVPMDPAEGENNSLLH C3 LDLWVYHTQGYPDWQNYTPGPGGRYPLTFGWCFKLVPVDPREGENQCLLH C4 LDLWVYHTQGFPDWQNYTPGPGVRYPLTFGWCFKLVPVDPSEGENNCLMH C5 LDLWVYNTQGFPDWQNYTPGPGTRYPLTFGWCFKLVPVDPREGEGNCLLH C6 LDLWVYNTQGYPDWQNYTPGPGIRYPLCFGWCFKLVPVDPQEGENNCLLH C7 LDLWVYNTQGYPDWQNYTPGPGIRYPLTFGWCFELVPVEPEKGENNCLLH C8 LDLWVYHTQGFPDWQNYTPGPGIRLPLTFGWCFKLILLDKEQGERNTLLH C9 LDLWVYNTQGYPDWQNYTPGPGIRYPLCFGWCFKLVPVDPGEGENNCLLH C10 LDLWVYHTQGYPDWQNYTPGPGIRYPLTFGWCYKLVPVDPDQGENNCLLH C11 LDLWTYNTQGYPDWQNYTPGPGIRYPLTFGWCFKLVPVDPSEGENNSLLH C12 LDLWVYHTQGYPDWQNYTPGPGIRYPLTFGWCFKLVPADPEQGENNCLLH C13 LDLWVYHTQGFPDWHNYTPGPGIRYPLTFGWCFKLVPVDPEQEENNCLLH C14 LDLWVHHTQGFPDWQNYTPGPGVRYPITFGWCFKLVPVEPEKGENNSLLH C15 LDLWVYHTQGYPDWQNYTPGPGIRYPLCFGWCFKLVPVEPDKGENNSLLH C16 LDLWVYNTQGFPDWQNYTPGPGVRYPLTFGWCYKLVPVDPKEGENNSLLH C17 LDLWVYHTQGFPDWQNYTPGPGVRLPLTFGWCFKLVPVDPREGENNCLLH C18 LDLWVYHTQGFPDWQCYTPGPGVRYPLTFGWCYKLVPVDPVEGENNCLLH C19 LDLWIYNTQGYPDWQNYTPGPGIRYPLTFGWCFKLVPVEPEKGENNSLLH C20 LDLWVYNTQGFPDWQNYTPGPGVRYPLTFGWCYKLVPVDPREGENNCLLH C21 LDLWVYHTQGYPDWQNYTPGPGIRYPLTFGWCFKLVPVEPEKGEDNCLLH C22 LDLWVYNTQGYPDWQNYTPGPGVRYPLTFGWCFKLVPVEPEKRENSSLLH C23 ICGSITHKASYPDWQNYTPGPGVRHPLTFGWCFKLVPVDPKEEENTSLMH C24 LDLWVYHTQGYPDWGNYTPGPGTRYPLTFGWCFKLVPVSPEEGENNCLLH C25 LDLWVYHTQGFPDWHNYTPGPGTRFPLCFGWCFKLVPVDPKEGENNCLLH C26 LDLWVYHTQGFPDWDNYTPGPGTRYPLTFGWCFKLVPMDPDKGENNCLLH C27 LDLWVYHTQGFPDWQNYTPGPGTRYPLTFGWCFKLVPMDSAEGENNSLLH C28 LDLWVYNTQGYPDWQNYTPGPGVRYPLTFGWCFKLVPVDPREGDNNCLLH C29 LDLWVHHTQGYPDWQNYTPGPGIRYPLTFGWCFKLVPLEPEEGENNSLLH C30 LDLWVYHTQGYPDWQNYTPGPGVRYPLTFGWPFKLVPVDPREGENNCLLH C31 LDLWVYHTQGYPDWQNYTPGPGVRFPLTFGWCFKLVPVDPGEGENNCLLH C32 LDLWVYHTQGYPDWQNYTPGPGVRFPLTFGWCFKLVPVEPDKGENNCLLH C33 LDLWVYNTQGYPDWHNYTPGPGIRFPLTFGWCFKLVPVDPREGENNCLLH C34 LDLWVYNTQGYPDWQNYTPGPGVRYPLTFGWCFKLVPVDPSEGENNCLLH C35 LDLWVYHTQGFPDWQNYTPGPGVRYPLTFGWPFKLVPVDPDKGEDNCLLH C36 LDLWVYNTQGFPDWQNYTPGPGIRLPLTFGWCFKLVPVDPSEGENNCLLH C37 LDLWVYHTQGYPDWQNYTPGPGVRYPLTFGWCYKLVPVDPREGENDCLLH C38 LDLWVYHTQGFPDWDNYTPGPGIRYPLCFGWCFKLVPVDSKEGENSCLLH C39 LDLWVYHTQGYPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKGENNSLLH C40 LDLWVYHTQGFPDWQNYTPGPGVRYPLTFGWCLKLVPVDPREGENNCLLH C41 LDLWVYNTQGFPDWQNYTPGPGVRYPLCFGWCFKLVPVDPRDGENNCLLH C42 LDLWVYHTQGFPDWHNYTPGPGIRFPLTFGWCFKLVPVDPDEGENNSLLH C43 LDLWIYNTQGYPDWQNYTPGPGIRYPLTFGWCFQLVPVEPEEGEDNCLLH C44 LDLWVYHTQGFPDWQNYTPGPGVRYPLTFGWPFKLVPVDPREGENNCLLH C45 LDLWVYNTQGIPDWQNYTPGPGTRFPLTFGWCFKLEPVDPAEEENNSLLH C46 LDLWVYNTQGFPDWQNYTPGPGIRFPLTFGWCFKLVPVDPEEGENNSLLH C47 LDLWVYHTQGYPDWQCYTPGPGTRFPLTFGWCFKLVPMDPAEGENNSLLH C48 LDLWVYNTQGFPDWQNYTPGPGVRYPLTFGWCFKLVPVDPDEGENNSLLH C49 LDLWVYHTQGFPDWQNYTPGPGVRYPLCFGWCFKLVPVEPEEGENNTLLH C50 LDLWVYHTQGYPDWQNYTPGPGVRYPLTFGWCFKLVPVDPREGENNCLLH : :. . *** ****** * *: *** :* . . : *:* C1 PISQHGMDPEKEVLMWKFDSRLAFQHMAREKHPEYYDC C2 PICQHGMDGDGEVLVWRFDSNLARRHIARELHPEFYDC C3 PLSQHGMDEEREVLKWQFDSSLARRHLARKKHPEYYDC C4 PISLHGMDEHKEVLKWQFDSQLARRHMARELHPEFYDC C5 PMSLHGMDEEREVLRWKFDSHLAHRHVAREIHPEFYDC C6 PMSQHGADEDREVLIWKFDTALARRHIARELRPEFYDC C7 PVCQHGMDPEKEVLMWKFNSRLAFTHVAREKHPEFYDC C8 PMSQHGMDPEREVLVWKFDSRLAFHHMAREKHPEFYDC C9 PMSQHGIDADREVLMWKFDSSLARKHIARELHPDYYDC C10 PMSQHGMDSEREVLVWKFDSRLAFHHIAREKHPEYYDC C11 PMSQHGMDEERETLIWVFDSRLAFKHMARELHPEFYDC C12 PLNQHGIDPEREVLVWKFDSRLAFHHMARELHPEFYDC C13 PMSQHGTDPEREVLMWKFDSRLAFHHMAREKHPEFYDC C14 PMSTHGMDPEGEVLMWKFDSRLAFHHMARELHPEYYNC C15 PISLHGMDPEGEVLQWKFDSRLAFHHLAKELHPEYFDC C16 PMSLHGMDEEGEVLRWKFDSSLARRHLARELHPEWYDo C17 PMSQHGMDEEREVLKWEFDSSLARRHLARELHPEYYDC C18 PISQHGIDEDREVLKWQFDSSLARKHLAREIHPEYYDC C19 PMSLHGMDPEKEVLVWRFDSRLAFHHVARELHPEYYDC C20 PMSQHGIDEDREVLRWQFDSSLARRHLAREKHPEFYDC C21 PMSQHGMDPEKEVLVWRFDSHLAFRYMARELHPEYYNC C22 AASLHGMDPEGEVLMWKFDSSLAFHHRALELHPEYFNo C23 PISLHGMDAHGEVLMWKFDSQLARRHLARELHPEWYDC C24 PMNQHGMDEDREVLRWEFDSRLAFHHIAREKHPEFFNC C25 PMNQHGIDEHGEVLMWKFDSALARKHIARELHPDYYDC C26 PINQHGMDPEKEVLVWKFDSLLAFHHVAREIHPEYFDC C27 PICQHGMDEEREVLIWTFDRSLAVKHKARELHPEFYDC C28 PMSQHGMDEHKEVLKWQFDSSLARRHVARELHPEYYDC C29 PMSQHGMDPEKEVLVWKFDSRLAFHHMAREKHPEYYDC C30 PISQHGMDEHGEVLMWKFDSQLTRRHLARELHPGFYDC C31 PISLHGMDEEREVLQWVFDSSLARRHMAREKHPEFYDC C32 PMNLHGMDPEREVLMWKFDSRLAFHHMAREKHPEFYDC C33 PVCQHGMDEHGEVLMWKFDSHLAHKHRARELHPEFYDC C34 PMSLHGIDADKEALIWKFDSSLAHRHLAREKHPGYYDC C35 PGSQHGMDPEKEVLMWKFDSRLAFHHMAKEKHPEYYDC C36 PMSQHGIDKEREVLMWKFDSNLARRHLAREKHPEYCDC C37 PMSLHGMDEHREVLKWQFDSSLARRHLAREIHPEYYDC C38 PMSQHGVDEEREVLMWKFDSALARRHLARELHPDYYDC C39 PMSLHGMDPEKEVLEWRFDSRLAFHHMARELHPEYYNC C40 PMSQHGMDADREVLRWKFDSHLARRHMARELHPEFYDC C41 PMSQHGIDEEREVLMWKFDSSLARRHIAREQHPEFYDC C42 PICQHGMDEEREVLKWQFDSRLAFTHQAREIHPEYYDC C43 PMNQHGMDPEKEVLMWKFDSRLAFEHRARVKHPEFYDC C44 PMSVHGMDEEREVLRWQFDSSLVRRHLARELHPEYYDC C45 PICQHGMDADNEVLRWKFDSSLARRHIARELHPNFYDC C46 PLCQHGMDEERETLRWEFDSRLALRHRAQELYPEFYDC C47 PICQHGMDEDREVLVWKFDSHLAFKHTARELHPEYYDC C48 PICQHGMDEEGEVLKWTFDSRLALRHIAHEKHPEFYDC C49 PASLHGMDSEGEVLQWKFDSRLAFHHIAREMHPEYFDC C50 PVCQHGMDEHREVLKWKFDSQLAHRHMARELHPEFYDC . ** * . *.* * *: *. : * * : : FORMAT of file input.prot.fasta.muscle_rs_0_0.fasta.ipi_bs.fasta Not Supported[FATAL:T-COFFEE] input.prot.fasta.muscle_rs_0_0.fasta.aln I:93 S:89 BS:94 # TC_SIMILARITY_MATRIX_FORMAT_01 # SEQ_INDEX C1 0 # SEQ_INDEX C2 1 # SEQ_INDEX C3 2 # SEQ_INDEX C4 3 # SEQ_INDEX C5 4 # SEQ_INDEX C6 5 # SEQ_INDEX C7 6 # SEQ_INDEX C8 7 # SEQ_INDEX C9 8 # SEQ_INDEX C10 9 # SEQ_INDEX C11 10 # SEQ_INDEX C12 11 # SEQ_INDEX C13 12 # SEQ_INDEX C14 13 # SEQ_INDEX C15 14 # SEQ_INDEX C16 15 # SEQ_INDEX C17 16 # SEQ_INDEX C18 17 # SEQ_INDEX C19 18 # SEQ_INDEX C20 19 # SEQ_INDEX C21 20 # SEQ_INDEX C22 21 # SEQ_INDEX C23 22 # SEQ_INDEX C24 23 # SEQ_INDEX C25 24 # SEQ_INDEX C26 25 # SEQ_INDEX C27 26 # SEQ_INDEX C28 27 # SEQ_INDEX C29 28 # SEQ_INDEX C30 29 # SEQ_INDEX C31 30 # SEQ_INDEX C32 31 # SEQ_INDEX C33 32 # SEQ_INDEX C34 33 # SEQ_INDEX C35 34 # SEQ_INDEX C36 35 # SEQ_INDEX C37 36 # SEQ_INDEX C38 37 # SEQ_INDEX C39 38 # SEQ_INDEX C40 39 # SEQ_INDEX C41 40 # SEQ_INDEX C42 41 # SEQ_INDEX C43 42 # SEQ_INDEX C44 43 # SEQ_INDEX C45 44 # SEQ_INDEX C46 45 # SEQ_INDEX C47 46 # SEQ_INDEX C48 47 # SEQ_INDEX C49 48 # SEQ_INDEX C50 49 # PW_SEQ_DISTANCES BOT 0 1 76.61 C1 C2 76.61 TOP 1 0 76.61 C2 C1 76.61 BOT 0 2 83.03 C1 C3 83.03 TOP 2 0 83.03 C3 C1 83.03 BOT 0 3 77.36 C1 C4 77.36 TOP 3 0 77.36 C4 C1 77.36 BOT 0 4 78.90 C1 C5 78.90 TOP 4 0 78.90 C5 C1 78.90 BOT 0 5 75.46 C1 C6 75.46 TOP 5 0 75.46 C6 C1 75.46 BOT 0 6 86.30 C1 C7 86.30 TOP 6 0 86.30 C7 C1 86.30 BOT 0 7 84.93 C1 C8 84.93 TOP 7 0 84.93 C8 C1 84.93 BOT 0 8 76.39 C1 C9 76.39 TOP 8 0 76.39 C9 C1 76.39 BOT 0 9 83.41 C1 C10 83.41 TOP 9 0 83.41 C10 C1 83.41 BOT 0 10 72.22 C1 C11 72.22 TOP 10 0 72.22 C11 C1 72.22 BOT 0 11 81.65 C1 C12 81.65 TOP 11 0 81.65 C12 C1 81.65 BOT 0 12 82.41 C1 C13 82.41 TOP 12 0 82.41 C13 C1 82.41 BOT 0 13 86.24 C1 C14 86.24 TOP 13 0 86.24 C14 C1 86.24 BOT 0 14 86.04 C1 C15 86.04 TOP 14 0 86.04 C15 C1 86.04 BOT 0 15 77.10 C1 C16 77.10 TOP 15 0 77.10 C16 C1 77.10 BOT 0 16 79.36 C1 C17 79.36 TOP 16 0 79.36 C17 C1 79.36 BOT 0 17 77.52 C1 C18 77.52 TOP 17 0 77.52 C18 C1 77.52 BOT 0 18 84.40 C1 C19 84.40 TOP 18 0 84.40 C19 C1 84.40 BOT 0 19 78.90 C1 C20 78.90 TOP 19 0 78.90 C20 C1 78.90 BOT 0 20 86.10 C1 C21 86.10 TOP 20 0 86.10 C21 C1 86.10 BOT 0 21 82.35 C1 C22 82.35 TOP 21 0 82.35 C22 C1 82.35 BOT 0 22 71.76 C1 C23 71.76 TOP 22 0 71.76 C23 C1 71.76 BOT 0 23 81.11 C1 C24 81.11 TOP 23 0 81.11 C24 C1 81.11 BOT 0 24 75.93 C1 C25 75.93 TOP 24 0 75.93 C25 C1 75.93 BOT 0 25 83.56 C1 C26 83.56 TOP 25 0 83.56 C26 C1 83.56 BOT 0 26 78.34 C1 C27 78.34 TOP 26 0 78.34 C27 C1 78.34 BOT 0 27 79.36 C1 C28 79.36 TOP 27 0 79.36 C28 C1 79.36 BOT 0 28 90.41 C1 C29 90.41 TOP 28 0 90.41 C29 C1 90.41 BOT 0 29 77.83 C1 C30 77.83 TOP 29 0 77.83 C30 C1 77.83 BOT 0 30 80.73 C1 C31 80.73 TOP 30 0 80.73 C31 C1 80.73 BOT 0 31 82.35 C1 C32 82.35 TOP 31 0 82.35 C32 C1 82.35 BOT 0 32 81.57 C1 C33 81.57 TOP 32 0 81.57 C33 C1 81.57 BOT 0 33 80.28 C1 C34 80.28 TOP 33 0 80.28 C34 C1 80.28 BOT 0 34 86.51 C1 C35 86.51 TOP 34 0 86.51 C35 C1 86.51 BOT 0 35 78.80 C1 C36 78.80 TOP 35 0 78.80 C36 C1 78.80 BOT 0 36 77.52 C1 C37 77.52 TOP 36 0 77.52 C37 C1 77.52 BOT 0 37 75.46 C1 C38 75.46 TOP 37 0 75.46 C38 C1 75.46 BOT 0 38 82.19 C1 C39 82.19 TOP 38 0 82.19 C39 C1 82.19 BOT 0 39 77.98 C1 C40 77.98 TOP 39 0 77.98 C40 C1 77.98 BOT 0 40 75.46 C1 C41 75.46 TOP 40 0 75.46 C41 C1 75.46 BOT 0 41 79.53 C1 C42 79.53 TOP 41 0 79.53 C42 C1 79.53 BOT 0 42 80.95 C1 C43 80.95 TOP 42 0 80.95 C43 C1 80.95 BOT 0 43 77.52 C1 C44 77.52 TOP 43 0 77.52 C44 C1 77.52 BOT 0 44 77.06 C1 C45 77.06 TOP 44 0 77.06 C45 C1 77.06 BOT 0 45 77.67 C1 C46 77.67 TOP 45 0 77.67 C46 C1 77.67 BOT 0 46 81.11 C1 C47 81.11 TOP 46 0 81.11 C47 C1 81.11 BOT 0 47 77.93 C1 C48 77.93 TOP 47 0 77.93 C48 C1 77.93 BOT 0 48 79.63 C1 C49 79.63 TOP 48 0 79.63 C49 C1 79.63 BOT 0 49 81.65 C1 C50 81.65 TOP 49 0 81.65 C50 C1 81.65 BOT 1 2 79.28 C2 C3 79.28 TOP 2 1 79.28 C3 C2 79.28 BOT 1 3 79.25 C2 C4 79.25 TOP 3 1 79.25 C4 C2 79.25 BOT 1 4 81.08 C2 C5 81.08 TOP 4 1 81.08 C5 C2 81.08 BOT 1 5 82.73 C2 C6 82.73 TOP 5 1 82.73 C6 C2 82.73 BOT 1 6 76.13 C2 C7 76.13 TOP 6 1 76.13 C7 C2 76.13 BOT 1 7 74.21 C2 C8 74.21 TOP 7 1 74.21 C8 C2 74.21 BOT 1 8 80.00 C2 C9 80.00 TOP 8 1 80.00 C9 C2 80.00 BOT 1 9 75.23 C2 C10 75.23 TOP 9 1 75.23 C10 C2 75.23 BOT 1 10 74.19 C2 C11 74.19 TOP 10 1 74.19 C11 C2 74.19 BOT 1 11 76.04 C2 C12 76.04 TOP 11 1 76.04 C12 C2 76.04 BOT 1 12 75.34 C2 C13 75.34 TOP 12 1 75.34 C13 C2 75.34 BOT 1 13 75.91 C2 C14 75.91 TOP 13 1 75.91 C14 C2 75.91 BOT 1 14 75.34 C2 C15 75.34 TOP 14 1 75.34 C15 C2 75.34 BOT 1 15 81.31 C2 C16 81.31 TOP 15 1 81.31 C16 C2 81.31 BOT 1 16 79.28 C2 C17 79.28 TOP 16 1 79.28 C17 C2 79.28 BOT 1 17 80.18 C2 C18 80.18 TOP 17 1 80.18 C18 C2 80.18 BOT 1 18 77.10 C2 C19 77.10 TOP 18 1 77.10 C19 C2 77.10 BOT 1 19 81.53 C2 C20 81.53 TOP 19 1 81.53 C20 C2 81.53 BOT 1 20 76.15 C2 C21 76.15 TOP 20 1 76.15 C21 C2 76.15 BOT 1 21 72.81 C2 C22 72.81 TOP 21 1 72.81 C22 C2 72.81 BOT 1 22 71.82 C2 C23 71.82 TOP 22 1 71.82 C23 C2 71.82 BOT 1 23 76.17 C2 C24 76.17 TOP 23 1 76.17 C24 C2 76.17 BOT 1 24 79.63 C2 C25 79.63 TOP 24 1 79.63 C25 C2 79.63 BOT 1 25 75.00 C2 C26 75.00 TOP 25 1 75.00 C26 C2 75.00 BOT 1 26 84.23 C2 C27 84.23 TOP 26 1 84.23 C27 C2 84.23 BOT 1 27 79.73 C2 C28 79.73 TOP 27 1 79.73 C28 C2 79.73 BOT 1 28 76.47 C2 C29 76.47 TOP 28 1 76.47 C29 C2 76.47 BOT 1 29 76.89 C2 C30 76.89 TOP 29 1 76.89 C30 C2 76.89 BOT 1 30 78.83 C2 C31 78.83 TOP 30 1 78.83 C31 C2 78.83 BOT 1 31 74.55 C2 C32 74.55 TOP 31 1 74.55 C32 C2 74.55 BOT 1 32 79.64 C2 C33 79.64 TOP 32 1 79.64 C33 C2 79.64 BOT 1 33 75.68 C2 C34 75.68 TOP 33 1 75.68 C34 C2 75.68 BOT 1 34 74.19 C2 C35 74.19 TOP 34 1 74.19 C35 C2 74.19 BOT 1 35 79.26 C2 C36 79.26 TOP 35 1 79.26 C36 C2 79.26 BOT 1 36 79.28 C2 C37 79.28 TOP 36 1 79.28 C37 C2 79.28 BOT 1 37 77.27 C2 C38 77.27 TOP 37 1 77.27 C38 C2 77.27 BOT 1 38 78.73 C2 C39 78.73 TOP 38 1 78.73 C39 C2 78.73 BOT 1 39 78.38 C2 C40 78.38 TOP 39 1 78.38 C40 C2 78.38 BOT 1 40 80.00 C2 C41 80.00 TOP 40 1 80.00 C41 C2 80.00 BOT 1 41 79.09 C2 C42 79.09 TOP 41 1 79.09 C42 C2 79.09 BOT 1 42 72.33 C2 C43 72.33 TOP 42 1 72.33 C43 C2 72.33 BOT 1 43 79.73 C2 C44 79.73 TOP 43 1 79.73 C44 C2 79.73 BOT 1 44 87.89 C2 C45 87.89 TOP 44 1 87.89 C45 C2 87.89 BOT 1 45 80.45 C2 C46 80.45 TOP 45 1 80.45 C46 C2 80.45 BOT 1 46 82.88 C2 C47 82.88 TOP 46 1 82.88 C47 C2 82.88 BOT 1 47 80.37 C2 C48 80.37 TOP 47 1 80.37 C48 C2 80.37 BOT 1 48 74.30 C2 C49 74.30 TOP 48 1 74.30 C49 C2 74.30 BOT 1 49 79.28 C2 C50 79.28 TOP 49 1 79.28 C50 C2 79.28 BOT 2 3 84.98 C3 C4 84.98 TOP 3 2 84.98 C4 C3 84.98 BOT 2 4 86.49 C3 C5 86.49 TOP 4 2 86.49 C5 C3 86.49 BOT 2 5 82.81 C3 C6 82.81 TOP 5 2 82.81 C6 C3 82.81 BOT 2 6 82.88 C3 C7 82.88 TOP 6 2 82.88 C7 C3 82.88 BOT 2 7 80.09 C3 C8 80.09 TOP 7 2 80.09 C8 C3 80.09 BOT 2 8 82.35 C3 C9 82.35 TOP 8 2 82.35 C9 C3 82.35 BOT 2 9 82.11 C3 C10 82.11 TOP 9 2 82.11 C10 C3 82.11 BOT 2 10 76.50 C3 C11 76.50 TOP 10 2 76.50 C11 C3 76.50 BOT 2 11 79.72 C3 C12 79.72 TOP 11 2 79.72 C12 C3 79.72 BOT 2 12 80.82 C3 C13 80.82 TOP 12 2 80.82 C13 C3 80.82 BOT 2 13 78.18 C3 C14 78.18 TOP 13 2 78.18 C14 C3 78.18 BOT 2 14 82.19 C3 C15 82.19 TOP 14 2 82.19 C15 C3 82.19 BOT 2 15 83.26 C3 C16 83.26 TOP 15 2 83.26 C16 C3 83.26 BOT 2 16 89.69 C3 C17 89.69 TOP 16 2 89.69 C17 C3 89.69 BOT 2 17 85.65 C3 C18 85.65 TOP 17 2 85.65 C18 C3 85.65 BOT 2 18 79.91 C3 C19 79.91 TOP 18 2 79.91 C19 C3 79.91 BOT 2 19 90.13 C3 C20 90.13 TOP 19 2 90.13 C20 C3 90.13 BOT 2 20 83.03 C3 C21 83.03 TOP 20 2 83.03 C21 C3 83.03 BOT 2 21 80.18 C3 C22 80.18 TOP 21 2 80.18 C22 C3 80.18 BOT 2 22 75.00 C3 C23 75.00 TOP 22 2 75.00 C23 C3 75.00 BOT 2 23 80.84 C3 C24 80.84 TOP 23 2 80.84 C24 C3 80.84 BOT 2 24 80.65 C3 C25 80.65 TOP 24 2 80.65 C25 C3 80.65 BOT 2 25 79.55 C3 C26 79.55 TOP 25 2 79.55 C26 C3 79.55 BOT 2 26 81.00 C3 C27 81.00 TOP 26 2 81.00 C27 C3 81.00 BOT 2 27 88.79 C3 C28 88.79 TOP 27 2 88.79 C28 C3 88.79 BOT 2 28 82.81 C3 C29 82.81 TOP 28 2 82.81 C29 C3 82.81 BOT 2 29 83.10 C3 C30 83.10 TOP 29 2 83.10 C30 C3 83.10 BOT 2 30 90.09 C3 C31 90.09 TOP 30 2 90.09 C31 C3 90.09 BOT 2 31 80.45 C3 C32 80.45 TOP 31 2 80.45 C32 C3 80.45 BOT 2 32 83.78 C3 C33 83.78 TOP 32 2 83.78 C33 C3 83.78 BOT 2 33 87.39 C3 C34 87.39 TOP 33 2 87.39 C34 C3 87.39 BOT 2 34 80.65 C3 C35 80.65 TOP 34 2 80.65 C35 C3 80.65 BOT 2 35 87.61 C3 C36 87.61 TOP 35 2 87.61 C36 C3 87.61 BOT 2 36 88.74 C3 C37 88.74 TOP 36 2 88.74 C37 C3 88.74 BOT 2 37 83.71 C3 C38 83.71 TOP 37 2 83.71 C38 C3 83.71 BOT 2 38 80.54 C3 C39 80.54 TOP 38 2 80.54 C39 C3 80.54 BOT 2 39 84.68 C3 C40 84.68 TOP 39 2 84.68 C40 C3 84.68 BOT 2 40 85.07 C3 C41 85.07 TOP 40 2 85.07 C41 C3 85.07 BOT 2 41 82.19 C3 C42 82.19 TOP 41 2 82.19 C42 C3 82.19 BOT 2 42 81.07 C3 C43 81.07 TOP 42 2 81.07 C43 C3 81.07 BOT 2 43 87.89 C3 C44 87.89 TOP 43 2 87.89 C44 C3 87.89 BOT 2 44 79.73 C3 C45 79.73 TOP 44 2 79.73 C45 C3 79.73 BOT 2 45 78.08 C3 C46 78.08 TOP 45 2 78.08 C46 C3 78.08 BOT 2 46 82.81 C3 C47 82.81 TOP 46 2 82.81 C47 C3 82.81 BOT 2 47 78.97 C3 C48 78.97 TOP 47 2 78.97 C48 C3 78.97 BOT 2 48 78.04 C3 C49 78.04 TOP 48 2 78.04 C49 C3 78.04 BOT 2 49 85.14 C3 C50 85.14 TOP 49 2 85.14 C50 C3 85.14 BOT 3 4 83.10 C4 C5 83.10 TOP 4 3 83.10 C5 C4 83.10 BOT 3 5 79.72 C4 C6 79.72 TOP 5 3 79.72 C6 C4 79.72 BOT 3 6 77.00 C4 C7 77.00 TOP 6 3 77.00 C7 C4 77.00 BOT 3 7 75.47 C4 C8 75.47 TOP 7 3 75.47 C8 C4 75.47 BOT 3 8 77.36 C4 C9 77.36 TOP 8 3 77.36 C9 C4 77.36 BOT 3 9 78.30 C4 C10 78.30 TOP 9 3 78.30 C10 C4 78.30 BOT 3 10 72.56 C4 C11 72.56 TOP 10 3 72.56 C11 C4 72.56 BOT 3 11 78.37 C4 C12 78.37 TOP 11 3 78.37 C12 C4 78.37 BOT 3 12 77.62 C4 C13 77.62 TOP 12 3 77.62 C13 C4 77.62 BOT 3 13 76.30 C4 C14 76.30 TOP 13 3 76.30 C14 C4 76.30 BOT 3 14 78.77 C4 C15 78.77 TOP 14 3 78.77 C15 C4 78.77 BOT 3 15 81.82 C4 C16 81.82 TOP 15 3 81.82 C16 C4 81.82 BOT 3 16 84.98 C4 C17 84.98 TOP 16 3 84.98 C17 C4 84.98 BOT 3 17 82.16 C4 C18 82.16 TOP 17 3 82.16 C18 C4 82.16 BOT 3 18 77.00 C4 C19 77.00 TOP 18 3 77.00 C19 C4 77.00 BOT 3 19 85.92 C4 C20 85.92 TOP 19 3 85.92 C20 C4 85.92 BOT 3 20 79.25 C4 C21 79.25 TOP 20 3 79.25 C21 C4 79.25 BOT 3 21 74.53 C4 C22 74.53 TOP 21 3 74.53 C22 C4 74.53 BOT 3 22 75.24 C4 C23 75.24 TOP 22 3 75.24 C23 C4 75.24 BOT 3 23 78.87 C4 C24 78.87 TOP 23 3 78.87 C24 C4 78.87 BOT 3 24 76.96 C4 C25 76.96 TOP 24 3 76.96 C25 C4 76.96 BOT 3 25 76.64 C4 C26 76.64 TOP 25 3 76.64 C26 C4 76.64 BOT 3 26 80.09 C4 C27 80.09 TOP 26 3 80.09 C27 C4 80.09 BOT 3 27 85.92 C4 C28 85.92 TOP 27 3 85.92 C28 C4 85.92 BOT 3 28 75.94 C4 C29 75.94 TOP 28 3 75.94 C29 C4 75.94 BOT 3 29 79.82 C4 C30 79.82 TOP 29 3 79.82 C30 C4 79.82 BOT 3 30 85.85 C4 C31 85.85 TOP 30 3 85.85 C31 C4 85.85 BOT 3 31 77.83 C4 C32 77.83 TOP 31 3 77.83 C32 C4 77.83 BOT 3 32 81.13 C4 C33 81.13 TOP 32 3 81.13 C33 C4 81.13 BOT 3 33 82.08 C4 C34 82.08 TOP 33 3 82.08 C34 C4 82.08 BOT 3 34 79.81 C4 C35 79.81 TOP 34 3 79.81 C35 C4 79.81 BOT 3 35 81.65 C4 C36 81.65 TOP 35 3 81.65 C36 C4 81.65 BOT 3 36 86.85 C4 C37 86.85 TOP 36 3 86.85 C37 C4 86.85 BOT 3 37 78.30 C4 C38 78.30 TOP 37 3 78.30 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