--- EXPERIMENT NOTES --- EXPERIMENT PROPERTIES #Fri Nov 10 15:53:51 WET 2017 codeml.models=0 1 2 3 7 8 mrbayes.mpich= mrbayes.ngen=1000000 tcoffee.alignMethod=CLUSTALW2 tcoffee.params= tcoffee.maxSeqs=0 codeml.bin=codeml mrbayes.tburnin=2500 codeml.dir= input.sequences= mrbayes.pburnin=2500 mrbayes.bin=mb_adops tcoffee.bin=t_coffee_ADOPS mrbayes.dir=/usr/bin/ tcoffee.dir= tcoffee.minScore=3 input.fasta= input.names= mrbayes.params= codeml.params= --- PSRF SUMMARY Estimated marginal likelihoods for runs sampled in files "/opt/ADOPS1/revisao14/ClustalW2/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS1/revisao14/ClustalW2/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": (Use the harmonic mean for Bayes factor comparisons of models) (Values are saved to the file /opt/ADOPS1/revisao14/ClustalW2/allfiles/mrbayes/input.fasta.fasta.mrb.lstat) Run Arithmetic mean Harmonic mean -------------------------------------- 1 -7799.94 -7815.36 2 -7799.94 -7816.92 -------------------------------------- TOTAL -7799.94 -7816.41 -------------------------------------- Model parameter summaries over the runs sampled in files "/opt/ADOPS1/revisao14/ClustalW2/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS1/revisao14/ClustalW2/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": Summaries are based on a total of 3002 samples from 2 runs. Each run produced 2001 samples of which 1501 samples were included. Parameter summaries saved to file "/opt/ADOPS1/revisao14/ClustalW2/allfiles/mrbayes/input.fasta.fasta.mrb.pstat". 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+ ------------------------------------------------------------------------------------------------------ TL{all} 1.273682 0.002599 1.180191 1.382338 1.274154 1374.77 1426.55 1.000 r(A<->C){all} 0.115457 0.000128 0.093629 0.137748 0.114765 989.77 1061.96 1.000 r(A<->G){all} 0.296287 0.000341 0.260611 0.332661 0.295522 766.46 858.80 1.000 r(A<->T){all} 0.078855 0.000059 0.065196 0.095190 0.078500 1016.70 1104.92 1.000 r(C<->G){all} 0.144625 0.000204 0.118463 0.172872 0.144082 970.82 994.12 1.000 r(C<->T){all} 0.289277 0.000315 0.254214 0.322338 0.289186 834.62 866.89 1.000 r(G<->T){all} 0.075499 0.000072 0.058801 0.091398 0.075277 1104.20 1171.98 1.000 pi(A){all} 0.299417 0.000116 0.279486 0.321999 0.299299 1196.34 1223.64 1.000 pi(C){all} 0.168205 0.000074 0.151560 0.185435 0.168260 1007.57 1058.45 1.000 pi(G){all} 0.190989 0.000079 0.173455 0.208621 0.190713 907.04 953.52 1.000 pi(T){all} 0.341388 0.000130 0.320145 0.364175 0.341499 946.11 1001.95 1.000 alpha{1,2} 0.887219 0.019323 0.642757 1.153104 0.865232 850.60 1146.46 1.000 alpha{3} 1.441365 0.098319 0.910752 2.041258 1.404061 1353.53 1384.45 1.000 pinvar{all} 0.040639 0.001062 0.000017 0.104445 0.033027 975.61 1137.33 1.000 ------------------------------------------------------------------------------------------------------ * Convergence diagnostic (ESS = Estimated Sample Size); min and avg values correspond to minimal and average ESS among runs. ESS value below 100 may indicate that the parameter is undersampled. + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge. Setting sumt conformat to Simple --- CODEML SUMMARY Model 1: NearlyNeutral -7170.181821 Model 2: PositiveSelection -7141.293411 Model 0: one-ratio -7310.560553 Model 3: discrete -7140.738871 Model 7: beta -7183.494041 Model 8: beta&w>1 -7143.580275 Model 0 vs 1 280.75746400000025 Model 2 vs 1 57.77682000000095 Additional information for M1 vs M2: Naive Empirical Bayes (NEB) analysis Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: S3_SFBB11_AB270795_MDSFBB3alpha) Pr(w>1) post mean +- SE for w 71 A 0.966* 3.220 77 Q 0.983* 3.258 81 Q 0.995** 3.285 110 L 0.997** 3.290 115 F 0.917 3.106 117 L 0.689 2.581 156 P 0.539 2.237 158 E 0.660 2.515 166 N 0.999** 3.295 168 Q 0.938 3.154 214 T 0.635 2.457 232 S 0.651 2.496 248 T 1.000** 3.296 250 G 0.972* 3.232 344 D 0.674 2.548 370 R 0.938 3.155 Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118) Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: S3_SFBB11_AB270795_MDSFBB3alpha) Pr(w>1) post mean +- SE for w 71 A 0.951* 3.452 +- 0.798 77 Q 0.979* 3.533 +- 0.692 81 Q 0.994** 3.572 +- 0.622 110 L 0.996** 3.579 +- 0.608 115 F 0.880 3.255 +- 0.994 117 L 0.630 2.590 +- 1.304 158 E 0.555 2.353 +- 1.277 166 N 0.999** 3.586 +- 0.593 168 Q 0.916 3.359 +- 0.909 214 T 0.542 2.329 +- 1.288 232 S 0.562 2.385 +- 1.292 248 T 1.000** 3.587 +- 0.591 250 G 0.964* 3.493 +- 0.753 344 D 0.594 2.478 +- 1.297 370 R 0.918 3.366 +- 0.903 Model 8 vs 7 79.82753199999934 Additional information for M7 vs M8: Naive Empirical Bayes (NEB) analysis Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: S3_SFBB11_AB270795_MDSFBB3alpha) Pr(w>1) post mean +- SE for w 5 R 0.792 2.165 22 P 0.734 2.055 33 H 0.608 1.833 71 A 0.994** 2.500 77 Q 0.996** 2.503 81 Q 0.998** 2.507 110 L 0.999** 2.508 115 F 0.985* 2.485 117 L 0.894 2.331 119 F 0.593 1.814 130 A 0.504 1.660 156 P 0.897 2.339 157 P 0.540 1.714 158 E 0.930 2.394 166 N 1.000** 2.509 168 Q 0.987* 2.488 185 R 0.733 2.050 197 R 0.745 2.076 200 Y 0.763 2.114 214 T 0.905 2.351 229 T 0.848 2.258 232 S 0.912 2.364 248 T 1.000** 2.510 250 G 0.993** 2.498 278 R 0.858 2.273 295 R 0.505 1.672 297 S 0.662 1.945 298 E 0.821 2.209 299 E 0.754 2.098 322 I 0.620 1.875 327 G 0.841 2.242 344 D 0.908 2.357 350 T 0.757 2.098 370 R 0.985* 2.485 372 V 0.774 2.127 380 H 0.799 2.171 Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118) Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: S3_SFBB11_AB270795_MDSFBB3alpha) Pr(w>1) post mean +- SE for w 5 R 0.813 2.215 +- 0.672 22 P 0.778 2.156 +- 0.756 33 H 0.669 1.950 +- 0.845 39 L 0.521 1.676 +- 0.893 58 L 0.532 1.695 +- 0.891 71 A 0.995** 2.580 +- 0.313 77 Q 0.997** 2.584 +- 0.306 81 Q 0.999** 2.588 +- 0.297 110 L 0.999** 2.588 +- 0.296 115 F 0.988* 2.565 +- 0.342 117 L 0.915 2.425 +- 0.551 119 F 0.656 1.928 +- 0.838 130 A 0.577 1.784 +- 0.868 145 K 0.519 1.680 +- 0.876 151 C 0.550 1.728 +- 0.889 156 P 0.906 2.400 +- 0.548 157 P 0.608 1.837 +- 0.875 158 E 0.937 2.462 +- 0.486 166 N 1.000** 2.589 +- 0.294 168 Q 0.990* 2.570 +- 0.336 185 R 0.783 2.170 +- 0.765 197 R 0.787 2.174 +- 0.739 198 T 0.545 1.723 +- 0.880 200 Y 0.795 2.186 +- 0.703 214 T 0.919 2.428 +- 0.532 229 T 0.862 2.311 +- 0.614 232 S 0.925 2.441 +- 0.517 248 T 1.000** 2.589 +- 0.293 250 G 0.995** 2.580 +- 0.316 278 R 0.873 2.335 +- 0.605 295 R 0.580 1.796 +- 0.851 297 S 0.713 2.034 +- 0.770 298 E 0.844 2.280 +- 0.652 299 E 0.787 2.169 +- 0.713 322 I 0.680 1.978 +- 0.793 327 G 0.864 2.319 +- 0.631 344 D 0.924 2.440 +- 0.525 347 G 0.536 1.707 +- 0.879 350 T 0.795 2.188 +- 0.726 370 R 0.989* 2.568 +- 0.341 372 V 0.810 2.218 +- 0.709 380 H 0.830 2.253 +- 0.682 381 V 0.548 1.727 +- 0.886
>C1 VFYPANKIIEMSHVRESETPEDRVVEILSRLPPKSLMRFKCIHKSWFSLI NNLSFVAKHLSNSVDNKLSSSTCILLNRSQAHIFPDQSWKQEVFWSMINF SIDSDENNLHYDVEDLNIPFALKDHDFVLIFGYCNGILCVEAGKNVLLCN PATREFKQLPDSCLLLPSPPERKFELETNFQALGFGYDCNAKEYKVVRII ENCEYSDDERTYYYRIALPHTAELYTTTANSWKEIKIDISSTTYSCSRSV FMKGFCYWYATDGEEYILSFDLGDDTFHIIQLPSRRESGFRFYYIFLRNE SLASFCSRYDRSEDSESCEIWVMDDYDGDKSSWTKLLNIGPLQGIKKPLT FWRSDELLMLDSDGRATSYNYSTRNLKYLHIPPILNRVVDFEVLIYVKSI VHVKoooooooooooooooooooo >C2 MSQVHESETPEDKVVEILCRLPPKSLMRFKCIRKSWCTLINRPSFVAKHL NNSVDNKLSSSTCILLNRSQAHIFPDQSWKQEVFWSTINLSIDSDEHNLH YDVEDLIIPFPLEDHDFVLIFGYCNGIVCVDAGKNVLLCNPATREFRQLP DSCLLQPPPKGKFELETTFQALGFGYDCNAKEYKVVRIVENCEYSDDEQT FYHRIALPHTAEVYTTAANFWKEIKIDISIKTYHCSCSVYLKGFCYWFAS DNEEYILAFYLGDETFHIIQLPSRRESGFTFDYIFLRNESLASFCSPYNP SEDSKLFEIWVMDDYDGVSSSWTKLLTVGPFKGVEYPLTLWKCDELLMLA SDGRATSYNSSTGNLKYLHIPPILNKVVDFEGLIYVKSIVPLKooooooo oooooooooooooooooooooooo >C3 MSQVCESETPEDRVVETLSRLPPKSLMRFKCICKSWCTLINSLSFVAKHL NNSMDNKLSSSTCILLSRSQAHVFPDNSWKPEVFWSMINLSIDSDEHNLH YDVEDLNIPFPLEGHDFVQIEGYCNGIVCVIAGTSLYLINVLLCNPATGK FRQLPPSYLLLPSRPQGKFQLESIFGGLGFGYDCKAKDYKVVQIIENCEY SDDQQYYYHRIALPHTAEVYTMAANSWRVIKIDISSETYHYSSSVYLNGF FYWFAIDGEKYILSFDLGDEIFHRIQLPSRRESDFEFSNIFLCNKSIASF CSCCDPSDEDSTLCEIWVMDDYDAVKRSWTKLLTFGPLKDIENPFTFWKT DELLMVAAGGRATTYNSSTGNLNYLHIPPILNEVRDFEALIYMESIVPVK oooooooooooooooooooooooo >C4 MFHVRESETPEDKVVEILSRLPSKSLMRFKCTRKSWCTLIISSSFVAKHL SNSVDNKLSSSTCILLNRSQMPVFPDKSWKYEILWSMIYLSIYSDEHNHH YDVEDLNIPFPLEDHHPVQIHGYCNGIVCVIAGKTVIILCNPGTGEFRQL PDSCLLVPLPKEKFQLETIFGGLGFGYDCKAKEYKVVQIIENCEYSDDER TFNHSIPLPHTAEVYTIAANSWKEIKIDISTKTYPSSCSVYLKGFCYWFA SDGEEYILSFDLGDEIFHRIQLPSRRESSFKFYDLFLYNESITSYCSHYD PTEDSKLFEIWVMDDYDGIKTSWTKLLTVGPFKGIEYPLTLWKCDELLML ASDGRAISYNSSIGNLKYLHIPPIINEVIDFETLSYVESIVPIKoooooo oooooooooooooooooooooooo >C5 MSQEHESEAPEDRVVEILSRLPPKSLMRFKCIRNSWCTLINSPRFVAKHI NNSVDNKLSSSTCILLHRSQTPIFPYDSWKREFFWSMINFSIDSDESNLH YDVEDLTNVPLLQWEDHHEVEIHGYCNGIVCVTVGEYFFLCNPATGEFSQ LPNSRLLLPLPRGKGKFGLETTVKGLGFGYDCKAKEYKVVRIIENYDCEY SDGEETYIEHTALPHTAEVYTTTANSWKEIKINISSKILSLYSYPYSCSV YLKGFCYWLSSDDEEYICSFNLGDEIFDRIELPSRRESGFKLDGIFLYNE SITYYCTSYEERSRLFEIWVMDNYDGVKSSWTKHLTAGPFKGIEFPLTLR KHDELLMIASDGRATSYNSNTGNLKYLHIPVIIYRNRVIDYAKSIVPVKR VEGKVPFSPIoooooooooooooo >C6 MSQVRKSETLKDRVTEMTQVRESETPEVRVAEILSRLPPKSLMRFKCIRK SWCTAINNPSFTAKHLSNSVDNKFSSSTCILLHRSHMPVFPDRSWKREYF WSMINLSHDSDEHNLYYDVEDLNIQFPLEDHDLVSVHGYCNGIVCLIVGK HAVLYNPATRELKQLPDSCLLLPSPPKGKFELESSFQGMGFGYDSKAKEY KVVKIIENCEYSDYERTFSHRIALPHTAEVYVTTTNSWRVIKIEISSDTY NCSCSVYLKGFCYWFASDDEEYILSFDLGDEIFHRIQLPRRKESGFLFYD LFLFNESIASFCSHYDKSDNSRILEILEIWVMDDCDGVKSSWTKLQTLGP FKDNENLLTFWKSDELLMVTSDNRVISYNSSTGNLKYIHIPPIINKITGF EALIYVESIVSVKRVEGKVPFSPI >C7 MSQVRESETPEDRVVEILSRLSPKSLLRFKCIRKSWCTLVNSPSFVAKHL SNSLENKLSSSTCILLNRSQFHIFPDQSWKREILWSMINLSIDSDVHNLH YDVKPLNIPFPRDDHNPVQIHGYCNGIVCLIEGDNVLLCNPSTREFRLLP NSCLLVPHPEGKFELETTFHGMGFGYDCKAKEYKVVQIIENCEYSDDGQT YQHCIAYPYTAEVYTTAANFWKEIKINISSTTHPYPFSVYLKGFCYWFAT DGEECILSFDLGDEIFHRIQLPSKIESGFEFCGLFLYNESITSYCCHNDP SEDSKLFEIWVMDGYGGVNSSWTKILTIGPSKDIEYPLTFWKCDELLMFA SGRRVTSYNSSTGNLKDLHIPPIMHQVTDLEALIYEESLVPIKooooooo oooooooooooooooooooooooo >C8 MSQVSETETPEDRVVAIMSKLPPKSLMRFKCIRKSWCTVINSPSFVAKHL SNSVDNKFSSSTCILLNRSQVHVFPDKSWKHEVLWSMINLFNERVARTLY YDVEDLNIPFPRDDHQHVLIHGYCNGIVCVISGKNILLCNPATREFRQLP DSFLLLPSPLGGKFELETDFGGLGFGYDCRAKDYKIVRIIENCEYSDDER TYYHRIPMPHTAEVFTMATNYWKEIKIDISSKTYPCSCSVYLKGFCYWFT RDGEEFILSFDLGDERFNRIQLPSRRESGLEFYYIFLCNESIASFCSRYD RSEDSKSCEIWVMDDYDGVKSSWTKLLVAGPFKGIEKPLTLWKCDELFMI DTDGRVISYNSSIGYLSYLHIPPIINRVIDSQALIYVESIVPIKoooooo oooooooooooooooooooooooo >C9 MSLVCESETPEDQLVEILSWLRPKSLMRFKCIRKSWCTIINSSSFVAKHL SNSIDNKLSSSTCILLNRCQVHDFPDRSWKQDVFWSMINLSIDSDKNNLH YDVEDLNIPFPMEDQDNVELHGYCNGIVCVIVGKNVLLCNPATGEFRQLP DSSLLLPLPKGRFGLETVFKGLGFGYDCKAKEYKVVRIIENCDCEYSEGE ESYYERILLPHTAEVYTMTTNSWKEIKIDVTSDTDPYCIPYSCSVYLKGF CYWFAMDNGEYIFSFDLGDEIFHIIELPSRREFGFKFYGIFLYNESITSY CSRYEEDCKLFEIWVMDDDDGVKSSWTKLLTVGPFKDIDYPLTLGKCDEV LMLGSYGRAAFCNSSIGNLKYLHIPPIINWMIDYVKSIVPVKoooooooo oooooooooooooooooooooooo >C10 MSQVHESETPEDKVVEILSRLSPKSLMRFKCVHKSWCTIINSPSFVAKHL SNTVDNKFSSFTCILFNRCQVHVFPDRSWKRDVFWSMINLSIDSDEHNLH YDVEDRNIPFPIEVQDNVQLYGYCNGIVCVIVGENVLLCNPATREFKQLP DSSLLLPLPTGKFGLETLFKGLGFGYDCKTKEYKVVRIIENCDCEYSDGK ESYIERILLPYTAEVYTTVANSWKEIKIDTSSDTDPYCIPYSCSMYLKGF CYWFANDNGEYIFSFDLGDEIFHRIELPFRRESDFKFCGLFLYNESVASY CSCYEEDCKLVETWVMDDYDGVKSSWTKLLTVGPFKDIESPLKFWKCDEV LILSSYGKATSYNSSTGNLKYFHIPPIINWMIDYVETIVPVKoooooooo oooooooooooooooooooooooo >C11 MSQVRECETPEDKVVEILSKLPPKSLIRFKCIRKSWCTIINSPSFVAKHL RISMDNKLSSTTCILLNRCQVHVFPDRSWKQDVFWSMTNLSIDSDEHNLH YDVEDLNIPFPMEDQDNVEIHGYCNGIVCVIVGKNVLLCNPATREFRQLP NSSLLLPLPKGRFGLETTFKGMGFGYDCKTKEYKVVRIIENCDCEYSEDG ESYYERILLPHTAEVYTTTANSWKEIKIDISIETRWYCIPYSCSVYLKGF CYWFAYDNGEYVFSFDLGDEIFHRIELPSRRESDFKFYGIFLYNESVTSY CYRHEEDCELFEIWVMDDYDGVKSSWTKQLTIGPLKDIDYPLTLWKCDEI LMLGSYGRAASCNSSTGNLKYLHIPPIINWMIDYVKSIVPVKoooooooo oooooooooooooooooooooooo >C12 MSQVRESETPEDRMVEILSRLPPKSLMRFKCIRKSWCTLINSPCFVAKHL SDSVDNKLSSSTCILLNCSQAHIFPDQSWKQGVLWSVIYLSIDGDELHYD IEDLTNVPFLKDDHHEVEIHGYCDGIVCVTVDENFFLCNPATGEFRQLPD SCLLLPLPGVKVKFGLETTLKGLGFGYDCKAKEYKVVRIIDNYDCEYSDD GETYIEHIALPHTAEVYTMAANSWKEITIDILSKILSSYSEPYSYSVYLK GFCYWLSCDLEEYIFSFDLANEISDMIELPFRGEFGFKRDGIFLYNESLT YYCTSYEEPSTLFEIWVMDYDDGFKSSWTKHLTVGPFKDMEFPLTPWKRD ELLMIASDGRAASYNSCTGNFKYLHIPVIINENRVVDYVKSIVLVNoooo oooooooooooooooooooooooo >C13 MLNKTVEMSQVHDSETPEDRVVEILSRLPPKSLMRFKCIHKSWCTLINSP SFVAKYLSNSVDNKLSSSTCILLNRTQMHVFPDQSWKYETLWSMMNLSNY SDEHNLQYDFKDLNIPFPTEDHHPVQIHSYCNGIVCVITGKSVRILCNPA TREFRQLPASCLLLPSPPEGKFQLETIFEGLGFGYDYKAKEYKVVQIIEN CEYSDDERRYYHRIALPHTAEVYTATANSWKEIKIEISSKTYQCYGSEYL KGFCYWLANDGEEYILSFDLGDEIFHKIQLPSRRESGFKFCNIFLCNESI ASFCCCYDPKNEDSTLCEIWVMDDYGGVKSSWTKLVTVGPLKGINENPLA FWKSDELLMVSCDGSVTSYNSSTKNLSYLNIPPILNEVRDFQAVIYVESI VSVKoooooooooooooooooooo >C14 MSQVHENETLEDRVVEILSRLLPKSLMRFKCIRKSWCTLINSPSFVAKQL SNSVDNKFSSSTCILLNRSQTHVFPDNSWKQEVFWSMINLSIDSDEHNLH YDVEDLNIPFPLEDHDYVLILGYCNGIVCVTAGKNILLCNPTTREFMRLP SSCLLLPSRPKGKFELETVFRALGFGYDCKAKEYKVVQIIENSEYSDDER TYYHRIPLPHTAEVYTTAANSWREIKIDISTKTYSCSCQVYLKGFCYWYA TDAEEYILSFDLGDEIFHRIQLPSRRESGFKFYYIFLRNESLASFCSRYD RSDKSESCEIWVMHNYDGVKSSWTKLLIIGPLQAIGKPLTFWKSDELLML ASDERATSYNSSTGNLKYLHIPPILNRVVDFQALIYVKSIVSFKoooooo oooooooooooooooooooooooo CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=14, Len=463 C1 ------VFYPANKIIEMSHVRESETPEDRVVEILSRLPPKSLMRFKCIHK C2 ----------------MSQVHESETPEDKVVEILCRLPPKSLMRFKCIRK C3 ----------------MSQVCESETPEDRVVETLSRLPPKSLMRFKCICK C4 ----------------MFHVRESETPEDKVVEILSRLPSKSLMRFKCTRK C5 ----------------MSQEHESEAPEDRVVEILSRLPPKSLMRFKCIRN C6 MSQVRKSETLKDRVTEMTQVRESETPEVRVAEILSRLPPKSLMRFKCIRK C7 ----------------MSQVRESETPEDRVVEILSRLSPKSLLRFKCIRK C8 ----------------MSQVSETETPEDRVVAIMSKLPPKSLMRFKCIRK C9 ----------------MSLVCESETPEDQLVEILSWLRPKSLMRFKCIRK C10 ----------------MSQVHESETPEDKVVEILSRLSPKSLMRFKCVHK C11 ----------------MSQVRECETPEDKVVEILSKLPPKSLIRFKCIRK C12 ----------------MSQVRESETPEDRMVEILSRLPPKSLMRFKCIRK C13 ---------MLNKTVEMSQVHDSETPEDRVVEILSRLPPKSLMRFKCIHK C14 ----------------MSQVHENETLEDRVVEILSRLLPKSLMRFKCIRK * : *: * ::. :. * .***:**** : C1 SWFSLINNLSFVAKHLSNSVDNKLSSSTCILLNRSQAHIFPDQSWKQEVF C2 SWCTLINRPSFVAKHLNNSVDNKLSSSTCILLNRSQAHIFPDQSWKQEVF C3 SWCTLINSLSFVAKHLNNSMDNKLSSSTCILLSRSQAHVFPDNSWKPEVF C4 SWCTLIISSSFVAKHLSNSVDNKLSSSTCILLNRSQMPVFPDKSWKYEIL C5 SWCTLINSPRFVAKHINNSVDNKLSSSTCILLHRSQTPIFPYDSWKREFF C6 SWCTAINNPSFTAKHLSNSVDNKFSSSTCILLHRSHMPVFPDRSWKREYF C7 SWCTLVNSPSFVAKHLSNSLENKLSSSTCILLNRSQFHIFPDQSWKREIL C8 SWCTVINSPSFVAKHLSNSVDNKFSSSTCILLNRSQVHVFPDKSWKHEVL C9 SWCTIINSSSFVAKHLSNSIDNKLSSSTCILLNRCQVHDFPDRSWKQDVF C10 SWCTIINSPSFVAKHLSNTVDNKFSSFTCILFNRCQVHVFPDRSWKRDVF C11 SWCTIINSPSFVAKHLRISMDNKLSSTTCILLNRCQVHVFPDRSWKQDVF C12 SWCTLINSPCFVAKHLSDSVDNKLSSSTCILLNCSQAHIFPDQSWKQGVL C13 SWCTLINSPSFVAKYLSNSVDNKLSSSTCILLNRTQMHVFPDQSWKYETL C14 SWCTLINSPSFVAKQLSNSVDNKFSSSTCILLNRSQTHVFPDNSWKQEVF ** : : *.** : :::**:** ****: : ** *** : C1 WSMINFSIDSDENNLHYDVEDL-NIPFAL-KDHDFVLIFGYCNGILCVEA C2 WSTINLSIDSDEHNLHYDVEDL-IIPFPL-EDHDFVLIFGYCNGIVCVDA C3 WSMINLSIDSDEHNLHYDVEDL-NIPFPL-EGHDFVQIEGYCNGIVCVIA C4 WSMIYLSIYSDEHNHHYDVEDL-NIPFPL-EDHHPVQIHGYCNGIVCVIA C5 WSMINFSIDSDESNLHYDVEDLTNVPLLQWEDHHEVEIHGYCNGIVCVTV C6 WSMINLSHDSDEHNLYYDVEDL-NIQFPL-EDHDLVSVHGYCNGIVCLIV C7 WSMINLSIDSDVHNLHYDVKPL-NIPFPR-DDHNPVQIHGYCNGIVCLIE C8 WSMINLFNERVARTLYYDVEDL-NIPFPR-DDHQHVLIHGYCNGIVCVIS C9 WSMINLSIDSDKNNLHYDVEDL-NIPFPM-EDQDNVELHGYCNGIVCVIV C10 WSMINLSIDSDEHNLHYDVEDR-NIPFPI-EVQDNVQLYGYCNGIVCVIV C11 WSMTNLSIDSDEHNLHYDVEDL-NIPFPM-EDQDNVEIHGYCNGIVCVIV C12 WSVIYLSIDGDE--LHYDIEDLTNVPFLK-DDHHEVEIHGYCDGIVCVTV C13 WSMMNLSNYSDEHNLQYDFKDL-NIPFPT-EDHHPVQIHSYCNGIVCVIT C14 WSMINLSIDSDEHNLHYDVEDL-NIPFPL-EDHDYVLILGYCNGIVCVTA ** : **.: : : . :. * : .**:**:*: C1 GKNVL-----LCNPATREFKQLPDSCLLLPS-PPERKFELETNFQALGFG C2 GKNVL-----LCNPATREFRQLPDSCLLQP--PPKGKFELETTFQALGFG C3 GTSLYLINVLLCNPATGKFRQLPPSYLLLPS-RPQGKFQLESIFGGLGFG C4 GKTVI----ILCNPGTGEFRQLPDSCLLVP--LPKEKFQLETIFGGLGFG C5 GEYFF-----LCNPATGEFSQLPNSRLLLPLPRGKGKFGLETTVKGLGFG C6 GKHAV-----LYNPATRELKQLPDSCLLLPS-PPKGKFELESSFQGMGFG C7 GDNVL-----LCNPSTREFRLLPNSCLLVP--HPEGKFELETTFHGMGFG C8 GKNIL-----LCNPATREFRQLPDSFLLLPS-PLGGKFELETDFGGLGFG C9 GKNVL-----LCNPATGEFRQLPDSSLLLP--LPKGRFGLETVFKGLGFG C10 GENVL-----LCNPATREFKQLPDSSLLLP--LPTGKFGLETLFKGLGFG C11 GKNVL-----LCNPATREFRQLPNSSLLLP--LPKGRFGLETTFKGMGFG C12 DENFF-----LCNPATGEFRQLPDSCLLLPLPGVKVKFGLETTLKGLGFG C13 GKSVR----ILCNPATREFRQLPASCLLLPS-PPEGKFQLETIFEGLGFG C14 GKNIL-----LCNPTTREFMRLPSSCLLLPS-RPKGKFELETVFRALGFG . * ** * :: ** * ** * :* **: . .:*** C1 YDCNAKEYKVVRIIENC--EYSDDERTYYYRIALPHTAELYTTTANSWKE C2 YDCNAKEYKVVRIVENC--EYSDDEQTFYHRIALPHTAEVYTTAANFWKE C3 YDCKAKDYKVVQIIENC--EYSDDQQYYYHRIALPHTAEVYTMAANSWRV C4 YDCKAKEYKVVQIIENC--EYSDDERTFNHSIPLPHTAEVYTIAANSWKE C5 YDCKAKEYKVVRIIENYDCEYSDGEETYIEHTALPHTAEVYTTTANSWKE C6 YDSKAKEYKVVKIIENC--EYSDYERTFSHRIALPHTAEVYVTTTNSWRV C7 YDCKAKEYKVVQIIENC--EYSDDGQTYQHCIAYPYTAEVYTTAANFWKE C8 YDCRAKDYKIVRIIENC--EYSDDERTYYHRIPMPHTAEVFTMATNYWKE C9 YDCKAKEYKVVRIIENCDCEYSEGEESYYERILLPHTAEVYTMTTNSWKE C10 YDCKTKEYKVVRIIENCDCEYSDGKESYIERILLPYTAEVYTTVANSWKE C11 YDCKTKEYKVVRIIENCDCEYSEDGESYYERILLPHTAEVYTTTANSWKE C12 YDCKAKEYKVVRIIDNYDCEYSDDGETYIEHIALPHTAEVYTMAANSWKE C13 YDYKAKEYKVVQIIENC--EYSDDERRYYHRIALPHTAEVYTATANSWKE C14 YDCKAKEYKVVQIIENS--EYSDDERTYYHRIPLPHTAEVYTTAANSWRE ** .:*:**:*:*::* ***: . : *:***::. .:* *: C1 IKIDISSTT-----YSCSRSVFMKGFCYWYATDGEEYILSFDLGDDTFHI C2 IKIDISIKT-----YHCSCSVYLKGFCYWFASDNEEYILAFYLGDETFHI C3 IKIDISSET-----YHYSSSVYLNGFFYWFAIDGEKYILSFDLGDEIFHR C4 IKIDISTKT-----YPSSCSVYLKGFCYWFASDGEEYILSFDLGDEIFHR C5 IKINISSKILSLYSYPYSCSVYLKGFCYWLSSDDEEYICSFNLGDEIFDR C6 IKIEISSDT-----YNCSCSVYLKGFCYWFASDDEEYILSFDLGDEIFHR C7 IKINISSTT-----HPYPFSVYLKGFCYWFATDGEECILSFDLGDEIFHR C8 IKIDISSKT-----YPCSCSVYLKGFCYWFTRDGEEFILSFDLGDERFNR C9 IKIDVTSDTD-PYCIPYSCSVYLKGFCYWFAMDNGEYIFSFDLGDEIFHI C10 IKIDTSSDTD-PYCIPYSCSMYLKGFCYWFANDNGEYIFSFDLGDEIFHR C11 IKIDISIETR-WYCIPYSCSVYLKGFCYWFAYDNGEYVFSFDLGDEIFHR C12 ITIDILSKILSSYSEPYSYSVYLKGFCYWLSCDLEEYIFSFDLANEISDM C13 IKIEISSKT-----YQCYGSEYLKGFCYWLANDGEEYILSFDLGDEIFHK C14 IKIDISTKT-----YSCSCQVYLKGFCYWYATDAEEYILSFDLGDEIFHR *.*: . :::** ** : * : : :* *.:: . C1 IQLPSRRESGFRFYYIFLRNESLASFCSRYDRSEDS---ESCEIWVMDDY C2 IQLPSRRESGFTFDYIFLRNESLASFCSPYNPSEDS---KLFEIWVMDDY C3 IQLPSRRESDFEFSNIFLCNKSIASFCSCCDPSDED--STLCEIWVMDDY C4 IQLPSRRESSFKFYDLFLYNESITSYCSHYDPTEDS---KLFEIWVMDDY C5 IELPSRRESGFKLDGIFLYNESITYYCTSYEERS-----RLFEIWVMDNY C6 IQLPRRKESGFLFYDLFLFNESIASFCSHYDKSDNSRILEILEIWVMDDC C7 IQLPSKIESGFEFCGLFLYNESITSYCCHNDPSEDS---KLFEIWVMDGY C8 IQLPSRRESGLEFYYIFLCNESIASFCSRYDRSEDS---KSCEIWVMDDY C9 IELPSRREFGFKFYGIFLYNESITSYCSRY--EEDC---KLFEIWVMDDD C10 IELPFRRESDFKFCGLFLYNESVASYCSCY--EEDC---KLVETWVMDDY C11 IELPSRRESDFKFYGIFLYNESVTSYCYRH--EEDC---ELFEIWVMDDY C12 IELPFRGEFGFKRDGIFLYNESLTYYCTSYEEPS-----TLFEIWVMDYD C13 IQLPSRRESGFKFCNIFLCNESIASFCCCYDPKNED--STLCEIWVMDDY C14 IQLPSRRESGFKFYYIFLRNESLASFCSRYDRSDKS---ESCEIWVMHNY *:** : * .: :** *:*:: :* . * ***. C1 DGDKSSWTKLLNIGPLQGI-KKPLTFWRSDELLMLDSDGRATSYNYSTRN C2 DGVSSSWTKLLTVGPFKGV-EYPLTLWKCDELLMLASDGRATSYNSSTGN C3 DAVKRSWTKLLTFGPLKDI-ENPFTFWKTDELLMVAAGGRATTYNSSTGN C4 DGIKTSWTKLLTVGPFKGI-EYPLTLWKCDELLMLASDGRAISYNSSIGN C5 DGVKSSWTKHLTAGPFKGI-EFPLTLRKHDELLMIASDGRATSYNSNTGN C6 DGVKSSWTKLQTLGPFKDN-ENLLTFWKSDELLMVTSDNRVISYNSSTGN C7 GGVNSSWTKILTIGPSKDI-EYPLTFWKCDELLMFASGRRVTSYNSSTGN C8 DGVKSSWTKLLVAGPFKGI-EKPLTLWKCDELFMIDTDGRVISYNSSIGY C9 DGVKSSWTKLLTVGPFKDI-DYPLTLGKCDEVLMLGSYGRAAFCNSSIGN C10 DGVKSSWTKLLTVGPFKDI-ESPLKFWKCDEVLILSSYGKATSYNSSTGN C11 DGVKSSWTKQLTIGPLKDI-DYPLTLWKCDEILMLGSYGRAASCNSSTGN C12 DGFKSSWTKHLTVGPFKDM-EFPLTPWKRDELLMIASDGRAASYNSCTGN C13 GGVKSSWTKLVTVGPLKGINENPLAFWKSDELLMVSCDGSVTSYNSSTKN C14 DGVKSSWTKLLIIGPLQAI-GKPLTFWKSDELLMLASDERATSYNSSTGN .. . **** ** : : : **:::. . * C1 LKYLHIPPILN--RVVDFEVLIYVKSIVHVKooooooooooooooooooo C2 LKYLHIPPILN--KVVDFEGLIYVKSIVPLKooooooooooooooooooo C3 LNYLHIPPILN--EVRDFEALIYMESIVPVKooooooooooooooooooo C4 LKYLHIPPIIN--EVIDFETLSYVESIVPIKooooooooooooooooooo C5 LKYLHIPVIIYRNRVID-----YAKSIVPVKRVEGKVPFSPIoooooooo C6 LKYIHIPPIIN--KITGFEALIYVESIVSVKRVEGKVPFSPI-------- C7 LKDLHIPPIMH--QVTDLEALIYEESLVPIKooooooooooooooooooo C8 LSYLHIPPIIN--RVIDSQALIYVESIVPIKooooooooooooooooooo C9 LKYLHIPPIIN--WMID-----YVKSIVPVKooooooooooooooooooo C10 LKYFHIPPIIN--WMID-----YVETIVPVKooooooooooooooooooo C11 LKYLHIPPIIN--WMID-----YVKSIVPVKooooooooooooooooooo C12 FKYLHIPVIINENRVVD-----YVKSIVLVNooooooooooooooooooo C13 LSYLNIPPILN--EVRDFQAVIYVESIVSVKooooooooooooooooooo C14 LKYLHIPPILN--RVVDFQALIYVKSIVSFKooooooooooooooooooo :. ::** *: : . * :::* .: C1 o------------ C2 oooooooooooo- C3 ooooo-------- C4 ooooooooooo-- C5 oooooo------- C6 ------------- C7 oooooooooooo- C8 ooooooooooo-- C9 ooooooooooooo C10 ooooooooooooo C11 ooooooooooooo C12 ooooooooo---- C13 o------------ C14 ooooooooooo-- PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427) -full_log S [0] -genepred_score S [0] nsd -run_name S [0] -mem_mode S [0] mem -extend D [1] 1 -extend_mode S [0] very_fast_triplet -max_n_pair D [0] 10 -seq_name_for_quadruplet S [0] all -compact S [0] default -clean S [0] no -do_self FL [0] 0 -do_normalise D [0] 1000 -template_file S [0] -setenv S [0] 0 -template_mode S [0] -flip D [0] 0 -remove_template_file D [0] 0 -profile_template_file S [0] -in S [0] -seq S [0] -aln S [0] -method_limits S [0] -method S [0] -lib S [0] -profile S [0] -profile1 S [0] -profile2 S [0] -pdb S [0] -relax_lib D [0] 1 -filter_lib D [0] 0 -shrink_lib D [0] 0 -out_lib W_F [0] no -out_lib_mode S [0] primary -lib_only D [0] 0 -outseqweight W_F [0] no -dpa FL [0] 0 -seq_source S [0] ANY -cosmetic_penalty D [0] 0 -gapopen D [0] 0 -gapext D [0] 0 -fgapopen D [0] 0 -fgapext D [0] 0 -nomatch D [0] 0 -newtree W_F [0] default -tree W_F [0] NO -usetree R_F [0] -tree_mode S [0] nj -distance_matrix_mode S [0] ktup -distance_matrix_sim_mode S [0] idmat_sim1 -quicktree FL [0] 0 -outfile W_F [0] default -maximise FL [1] 1 -output S [1] score_ascii html score_ascii -len D [0] 0 -infile R_F [1] input.prot.fasta.clustalw2_rs_0_0.fasta.aln -matrix S [0] default -tg_mode D [0] 1 -profile_mode S [0] cw_profile_profile -profile_comparison S [0] profile -dp_mode S [0] linked_pair_wise -ktuple D [0] 1 -ndiag D [0] 0 -diag_threshold D [0] 0 -diag_mode D [0] 0 -sim_matrix S [0] vasiliky -transform S [0] -extend_seq FL [0] 0 -outorder S [0] input -inorder S [0] aligned -seqnos S [0] off -case S [0] keep -cpu D [0] 0 -maxnseq D [0] 1000 -maxlen D [0] -1 -sample_dp D [0] 0 -weight S [0] default -seq_weight S [0] no -align FL [1] 1 -mocca FL [0] 0 -domain FL [0] 0 -start D [0] 0 -len D [0] 0 -scale D [0] 0 -mocca_interactive FL [0] 0 -method_evaluate_mode S [0] default -evaluate_mode S [1] t_coffee_fast -get_type FL [0] 0 -clean_aln D [0] 0 -clean_threshold D [1] 1 -clean_iteration D [1] 1 -clean_evaluate_mode S [0] t_coffee_fast -extend_matrix FL [0] 0 -prot_min_sim D [40] 40 -prot_max_sim D [90] 90 -prot_min_cov D [40] 40 -pdb_type S [0] d -pdb_min_sim D [35] 35 -pdb_max_sim D [100] 100 -pdb_min_cov D [50] 50 -pdb_blast_server W_F [0] EBI -blast W_F [0] -blast_server W_F [0] EBI -pdb_db W_F [0] pdb -protein_db W_F [0] uniprot -method_log W_F [0] no -struc_to_use S [0] -cache W_F [0] use -align_pdb_param_file W_F [0] no -align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble -external_aligner S [0] NO -msa_mode S [0] tree -master S [0] no -blast_nseq D [0] 0 -lalign_n_top D [0] 10 -iterate D [1] 0 -trim D [0] 0 -split D [0] 0 -trimfile S [0] default -split D [0] 0 -split_nseq_thres D [0] 0 -split_score_thres D [0] 0 -check_pdb_status D [0] 0 -clean_seq_name D [0] 0 -seq_to_keep S [0] -dpa_master_aln S [0] -dpa_maxnseq D [0] 0 -dpa_min_score1 D [0] -dpa_min_score2 D [0] -dpa_keep_tmpfile FL [0] 0 -dpa_debug D [0] 0 -multi_core S [0] templates_jobs_relax_msa_evaluate -n_core D [0] 0 -max_n_proc D [0] 0 -lib_list S [0] -prune_lib_mode S [0] 5 -tip S [0] none -rna_lib S [0] -no_warning D [0] 0 -run_local_script D [0] 0 -plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: set -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 424 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 424 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 424 type PROTEI