--- EXPERIMENT NOTES --- EXPERIMENT PROPERTIES #Fri Nov 03 09:05:15 WET 2017 codeml.models=0 1 2 3 7 8 mrbayes.mpich= mrbayes.ngen=1000000 tcoffee.alignMethod=CLUSTALW2 tcoffee.params= tcoffee.maxSeqs=0 codeml.bin=codeml mrbayes.tburnin=2500 codeml.dir= input.sequences= mrbayes.pburnin=2500 mrbayes.bin=mb_adops tcoffee.bin=t_coffee_ADOPS mrbayes.dir=/usr/bin/ tcoffee.dir= tcoffee.minScore=3 input.fasta= input.names= mrbayes.params= codeml.params= --- PSRF SUMMARY Estimated marginal likelihoods for runs sampled in files "/opt/ADOPS1/Srevisao1/S25_wo/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS1/Srevisao1/S25_wo/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": (Use the harmonic mean for Bayes factor comparisons of models) (Values are saved to the file /opt/ADOPS1/Srevisao1/S25_wo/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat) Run Arithmetic mean Harmonic mean -------------------------------------- 1 -6982.70 -7000.16 2 -6982.12 -7000.54 -------------------------------------- TOTAL -6982.37 -7000.37 -------------------------------------- Model parameter summaries over the runs sampled in files "/opt/ADOPS1/Srevisao1/S25_wo/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS1/Srevisao1/S25_wo/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": Summaries are based on a total of 3002 samples from 2 runs. Each run produced 2001 samples of which 1501 samples were included. Parameter summaries saved to file "/opt/ADOPS1/Srevisao1/S25_wo/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat". 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+ ------------------------------------------------------------------------------------------------------ TL{all} 1.322984 0.003197 1.215909 1.433289 1.321732 1438.33 1469.66 1.000 r(A<->C){all} 0.125737 0.000168 0.100958 0.153152 0.125412 1054.73 1127.91 1.000 r(A<->G){all} 0.297175 0.000367 0.260971 0.337011 0.296858 766.02 790.71 1.000 r(A<->T){all} 0.082423 0.000068 0.066726 0.099221 0.082064 1113.06 1131.78 1.001 r(C<->G){all} 0.160281 0.000259 0.125730 0.188794 0.160690 820.45 903.02 1.001 r(C<->T){all} 0.252500 0.000312 0.217481 0.287294 0.252582 708.35 813.60 1.000 r(G<->T){all} 0.081884 0.000090 0.064058 0.099915 0.081620 1183.83 1191.77 1.000 pi(A){all} 0.303576 0.000123 0.283136 0.325971 0.303335 1119.36 1222.25 1.000 pi(C){all} 0.175901 0.000078 0.159542 0.193615 0.175651 966.29 1149.92 1.000 pi(G){all} 0.187724 0.000084 0.171142 0.206984 0.187559 827.13 996.35 1.001 pi(T){all} 0.332799 0.000130 0.310492 0.353671 0.332934 901.06 942.52 1.000 alpha{1,2} 0.814956 0.019030 0.598967 1.099378 0.796088 1033.76 1160.63 1.000 alpha{3} 1.591647 0.170390 0.937624 2.428975 1.517846 1124.33 1261.68 1.000 pinvar{all} 0.050971 0.001568 0.000016 0.129532 0.042146 1176.77 1226.25 1.000 ------------------------------------------------------------------------------------------------------ * Convergence diagnostic (ESS = Estimated Sample Size); min and avg values correspond to minimal and average ESS among runs. ESS value below 100 may indicate that the parameter is undersampled. + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge. Setting sumt conformat to Simple --- CODEML SUMMARY Model 1: NearlyNeutral -4614.937215 Model 2: PositiveSelection -4576.620725 Model 0: one-ratio -4730.681094 Model 3: discrete -4576.210114 Model 7: beta -4622.169065 Model 8: beta&w>1 -4577.413507 Model 0 vs 1 231.4877579999993 Model 2 vs 1 76.63298000000032 Additional information for M1 vs M2: Naive Empirical Bayes (NEB) analysis Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: S25_SFBB1) Pr(w>1) post mean +- SE for w 14 N 0.997** 4.110 20 R 0.997** 4.111 24 P 0.996** 4.107 55 L 0.991** 4.092 60 F 0.788 3.460 62 E 0.993** 4.098 64 G 0.710 3.217 102 R 0.985* 4.075 109 I 0.995** 4.106 111 T 1.000** 4.119 140 Q 0.879 3.743 157 T 0.833 3.600 172 E 0.964* 4.010 175 C 0.995** 4.104 191 T 0.999** 4.118 193 E 0.948 3.959 221 K 0.784 3.445 238 C 0.683 3.133 Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118) Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: S25_SFBB1) Pr(w>1) post mean +- SE for w 14 N 0.996** 4.292 +- 0.539 20 R 0.996** 4.295 +- 0.532 24 P 0.995** 4.289 +- 0.548 55 L 0.988* 4.269 +- 0.605 60 F 0.734 3.407 +- 1.509 62 E 0.991** 4.278 +- 0.580 64 G 0.642 3.092 +- 1.613 102 R 0.981* 4.244 +- 0.664 109 I 0.994** 4.287 +- 0.554 111 T 1.000** 4.305 +- 0.498 140 Q 0.852 3.814 +- 1.258 157 T 0.787 3.587 +- 1.415 172 E 0.951* 4.139 +- 0.861 175 C 0.994** 4.286 +- 0.558 191 T 0.999** 4.304 +- 0.503 193 E 0.934 4.087 +- 0.948 221 K 0.721 3.356 +- 1.526 238 C 0.583 2.871 +- 1.627 Model 8 vs 7 89.51111599999967 Additional information for M7 vs M8: Naive Empirical Bayes (NEB) analysis Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: S25_SFBB1) Pr(w>1) post mean +- SE for w 1 L 0.579 2.503 14 N 0.998** 3.683 20 R 0.998** 3.683 24 P 0.997** 3.681 55 L 0.995** 3.674 60 F 0.873 3.334 62 E 0.996** 3.676 64 G 0.819 3.182 75 A 0.636 2.668 102 R 0.992** 3.665 109 I 0.997** 3.680 111 T 1.000** 3.688 140 Q 0.922 3.470 157 T 0.899 3.406 172 E 0.982* 3.637 175 C 0.997** 3.680 191 T 1.000** 3.687 193 E 0.970* 3.604 221 K 0.870 3.326 238 C 0.828 3.212 Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118) Positively selected sites (*: P>95%; **: P>99%) (amino acids refer to 1st sequence: S25_SFBB1) Pr(w>1) post mean +- SE for w 14 N 0.997** 3.805 +- 0.568 20 R 0.997** 3.806 +- 0.567 24 P 0.996** 3.802 +- 0.576 55 L 0.992** 3.790 +- 0.604 60 F 0.805 3.206 +- 1.232 62 E 0.993** 3.795 +- 0.595 64 G 0.732 2.976 +- 1.340 75 A 0.532 2.355 +- 1.429 102 R 0.987* 3.774 +- 0.637 109 I 0.996** 3.802 +- 0.577 111 T 1.000** 3.813 +- 0.550 140 Q 0.884 3.461 +- 1.063 157 T 0.842 3.323 +- 1.162 172 E 0.968* 3.712 +- 0.742 175 C 0.996** 3.801 +- 0.579 191 T 0.999** 3.812 +- 0.553 193 E 0.952* 3.668 +- 0.817 221 K 0.794 3.166 +- 1.249 238 C 0.715 2.900 +- 1.329
>C1 LSSSTCILLNRCQNHVFPDRSWKPEVFWSLINLSIDSDDHNLHYDVEDLN IPCPLEGHDFVEIGGYCNGIVCVLAWKTLHWIYVILCNPATGEFRQLPHS CLLQPSRSRRKFELNTISTLLGFGYDCKAKEYKVVQVIENCEYSDAEQYD YHRIALPHTAEVYTTTANSWREIKIDISSETYCYTCSVYLNGFCYWIATD EEDFILSFDLGDEIFHRIQLPSRRDSDFKFSNLFLCNKSIASFGYCCNPS DEDSTooooooooooooooooooooooooooooooooooooooooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo o >C2 MNESETPGDRVVEILSKLWPKSLMRFKCIRKSWCTLINSPSFVVKHLNNS MDNKLSSSTCILVNRSQPHIFPDQNWKQEIFWSKINISIDSDEHNLHYDV VDLNIPFPLEDHDFVQIHGYCSGIVCVIVGKHFLLCNPATREFKQLPDSC LLLPTAEGKFELDTTFEALGFGFDCKAKEYKVVQIIENCEYSDDEQTFYH CTTLPHTAEVYTTAANSWKEIKIDISSKTYSWSCSVYLKGFCYWYATDDE EYVLSFDLGDETFHRIQLPSRGVSGFTFFYIFLCNGSLASFCSRYDGSGD SQSCEIWVMGDYGKVKSSWTKLLTIESLQGIEKPLTFWKSDELLMLASNG KATSYNSSSGNLKYVHIPPILNKVVDFQALIYVESIVSLKoooooooooo o >C3 KSLMRFKCIHKSWFSLINSLSFVGKHLSNFVDKKLSSSTCILLNRSHAHI FPDQSWKQEVFWSMINFSIDNDENNLHYDVEDLNIPFPLNDHDFVLIFGY CNGIVCVEAGKNVLLCNPATREFRQLPDSCLLLPSPPEGKFELETSFQAL GFGYDCNAKEYKVLRIIENCEYSDEERTFYHRIALPHTAELYTATANSWK EIKIDISSATYSCSRSVFLKGFCYWYATDGEEYVLSFDLGDDTFHIIQLP PRRESGFRFYYIFLRNESLASFCSRYDRSEDSESCEIWVMDDYDRVKSSW TKLLTIGPLQGIKKPLTFWKSDEVLMLDSDGRATSYNSNTRNLKYLHIPP ILKRVVDFEVLIYVKSoooooooooooooooooooooooooooooooooo o >C4 ETPEDKVVEILSRLQPKSLMRFKCIHKSWCTLINSPSFVAKHLNNSMDNK LSSSTCILLNRSQAHIFPDQSWKQEVFWSTINLSIDSDEHNLHYDVEDLI IPFPLEDHDFVLIFGYCNGIICVDAGKNVLLCNPATREFRQLPDSCLLLP PPKGKFELETTFQALGFGYDCNSKEYKVVRIIENCEYSDDEQTFHHRIAL PHTAEVYTTAANSWKEIKIDISSQTYHCSCSVYLNGFCYWFASDSEEYIL SFYLGDETFHIIQLPSRRESGFTFDYIFLRNESLASFCSPYNPSEDSKLF EIWVMDDYDGVKSSWTKLLTVGPFKGIEYPLTLWKCDELLMLASDGRATS YNSSTGNLKYLHIPPILNKVVDFEGLIYVKSIVPoooooooooooooooo o >C5 MSQVRESETLEDRVVETLSRLPPKSLIRFKCIRKSWCTLINNPSFVAKHL NNSMDNKLSSSTCILLSRSQAHVFPDNSWKPEVFWSLINLSIDSDEHNLH YDVEDLNIPFPLEGHDFVQIEGYCNGIVCVIAGTSLYLINVLLCNPATGK FRQLPPSCLLLPSRPKGKFELESIFGGLGFGYDCKAKEYKVVQIIENCEY SDDQQYYYHRIALPHTAEVYTMAANSWREIKIDLSSETFHCSYSVYLKGF CYWLATNGEKYILSFDFGDKVFHRIQLPSRRESDFEFSNLFLCNNSMASF FSCCDPSDEDSTLCEIWVoooooooooooooooooooooooooooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo o >C6 MWNKIFEMSQARESETLEDKVVQILSRLPPKSLMRFKCTRKSWCTLINSS SFVAKHLSNSIDNKLSSSTCILLNRSKMPVFLDKSWKYEILWSMIYLSID SDEHNHHYDVEDLNIPFPLEDHHPVQIHGYCNGIICVIAGKTVIILCNPG TREFRQLPDSCLLVPLPKEKFQLETIFGGLGFGYDCKAKEYKVVQIIENC EYSNDERTFYHSIPLPHTAEVYTIAANSWKEIKIDISTKTYPSSCSVYLK GFCYWFASDGEECILSFDLGDEIFHRIQLPSRRESSFKFYDIFLYNESIT SYCSHYDPSDDSKLFEIWVMDDYDGSKSSWTKLLTVGPFKGIEYPLALWK CDELLMLASNGRAISYNSSTGNLKYLHIPPIINEVIDFEALSYVESIVPI K >C7 KCIRKSWCTLINSPRFVAKHLNNSTDNKLSSSTRILLHRSQMPIFPCDSW KREFFWSMINLSIDSDESNLHYDVEDLTNIPLLQWEDHHEVEIHGYCNGI VCVTVGEYFFLCNPATGEFSQLPNSRLLLPLPGGKGKFGLETTVKGLGFG YDCKAKEYKVVRIIENYDCEYSDGEETYIKHTALPHTAEVYTTTANSWKE IQINISSKILSFYSYPYSCSLYLKGFCYWLSSDDEEYVFSFDLGDEIFDR IELPSRRESGFKLDGIFLYNESITYYCTSYEECSRLFEIWVMDNYDGVKS SWTKoooooooooooooooooooooooooooooooooooooooooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo o >C8 MSLVRESEIPEDRVVEILPRLSPKSLLRFKCIRKSWCTLINSPSFVAKQL SNSVDNKFSSSTCILLNRSQTHVFPDNSWKQEVFWSMINLSlDSDEHNLH YDVEDLNIPFPLEDHDYVLILGYCNGIVCVTAGKNILLCNPTTREFMRLP SSCLLLPSRPKGKFELETVFRALGFGYDCKAKEYKVVQIIENSEYSDDER TYYHRIPLPHTAEVYTTAANSWREIKIDISTKTYSCSCQVYLKGFCYWYA TDAEEYILSFDLGDEIFHRIQLPSRRESGFKFYYIFLCNESIASFCSCYo oooooooooooooooooooooooooooooooooooooooooooooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo o >C9 MTQVRESETPEDRVAEILSRLPPKSLMRFKCIRKSWYKVIKNPSFMAKHL SKNSVDNKFSSSTCILLHRSQMPVFPDRSWKREYFWSMINLSHDSDKHNL YYDVEDLNIQFPLEDHDHVSIHGYCNGIVCLIVGKNAVLYNPATRELKQL PDSCLLLPSPPEGKFKLESTFQGMGFGYDSQAKEYKVVKIIENCEYSDDM RTFSHRIALPHTAEVYVMTTNSWRVIEIEISSDTYNCSCSVYLKGFCYWF ASDDEEYILSFDLGDEIFHRIQLPYRKESGFLFYNLFLYNESIASFCSHY DKSDNSGILEILEIWVMDDCDGVKSSWTKLLTLGPFKDNENLLTFWKSDE LLMVTSDKKTISYNSSTGNLKYIHIPPIINKVoooooooooooooooooo o >C10 MSLVRESEIPEDRVVEILPRLSPKSLLRFKCIrKSWCTLINSPSFVAKHL NNSVDNKRSSSTCILLNRSQFHIFPDQSWKREVLWSMINLSSDSNVHNLH YDVKPLNIPFSRDDHNPVQIHGYCNGIVCLIEGDNVLLCNPSTREFRLLP NSCLLVPHPEGKFQLETTFHGMGFGYDCKANEYKVVQIVENCEYSDDEQT YQHCIAYPYTAEVYTTAANFWKEIKIDISSSTHPYPFSVYLKGFCYWFAT DGEECILSFDLGDEIFHRIQLPSKIESGFNFCGLFLYNESITSYCCRYDP SEDSKLFEIWVMDooooooooooooooooooooooooooooooooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo o >C11 MSQVSESETPEDKVVEILSKLPPKSLMRFKCIRKSWCTIINSPSFVAKHL SNSVDNKFSSSTCILLNRSQVHVFPDKSWKHEVLWSMIKFFNDRISRTLY YDVEDLNIPFPRDDHQHVLIHGYCNGIVCVISGKNILLCNPATREFRQLP DSFLVLPSPLSGKFELETDLGGLGFGYDCRAKDYKVVRIIENCEYSDDER TYYNRIPLPHTSEVYTMATNSWKEIKIDISRKTYPCSCSVYLKGFCYWFT RDGEEFILSFDLGDERFHRIQLPSRRESGLEFYYIFLCNESIASFCSLYD RSEDSKLCEIWVMDDYDGVKSSWTKLLVAGPFKGIEKPLTLWKCDELLMI DTNGRVISYNSSIGYLSYLHIPLIINRVIDSQALIYoooooooooooooo o >C12 KSLMRFKCIRKSWCSIINSPSFVAKHLSNSADNKLSSSTCILLNRCQVHV FPDKNWKQDVFWSMINRSIDSDEHNLHYDVEDLNIPFPMEDQDNVDLHGY CNGIVCVIVGKNVLLCNPATGEFRQLPDSSLLLPLPKGRFGLETIFKGLG FGYDCKAKEYKVVRIIENCDCEYSEGEESYYERILLPHTAEVYTMNANSW KEIKIDVTSDTDPYCIPYSCSVYLKGFCYWFAMDNGEYIFSFDLGDELFH IIELPSRKESGFKFYGLFLYNESITSYCSHYEESNSKLFEIWVooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo o >C13 MSQVHESETPEDKVVEILSRLSPKSLMRFKCVHRSWCTIISSPSFVAKHL SNTVDNKFSSFTCILFNRCQVHVFPDRSWKRDVFWSMINLSIDSDEHNLH YDVEDRNIPFPIEVQDNVQLYGYCNGIVCVIVGENVLLCNPATREFKQLP DSSLLLPLPMGKFGLETLFKGLGFGYDCKTKEYKVVRIIENCDCEYSDGK ESYIERILLPYTAEVYTTAANSWKEIKIDTSSDTDPYCIPYSCSLYLKGF CYWFANDNGEYIFSFDLGDEMFHRIELPFRRESDFKFCGLFLYNESVASY CSCYEEDCKLVEIWVMDDYDGVKSSWTKLLTVGPFKDIESPLKFWKCDEV LILSSYGKATSYNSSTGNLKYFHIPPIINWMIDYVETIVSVKoooooooo o >C14 KSLMRFKCIRKSWCTFINSPSFVAKYLSNSVHNKLSSSTCILLNRTQMHV FPDQSWKYETLWSMMNLSNYSDEHNLHYDFKDLNIPFPTEDHHPVQIHSY CNGIVCVITGKSVRILCNPTTREFRQLPASCLLLPSPPQGKFQLETIFEG LGFGYDYKAKEYKVVQIIENCEYSDDERRYYHRIALPHTAEVYTTTANSW KEIKIEISSKTYQCYGSEYLKGFCYWLANDGDEYILSFDLGDEIFHIIQL PSKRESGFKFYNIFLCNESIASFCCCYDPRNEDSTLCEIWVMDooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo oooooooooooooooooooooooooooooooooooooooooooooooooo o CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=14, Len=482 C1 -------------------------------------------------- C2 ----------MNESETPGDRVVEILSKLWPKSLMRFKCIRKSWCTLINSP C3 ------------------------------KSLMRFKCIHKSWFSLINSL C4 --------------ETPEDKVVEILSRLQPKSLMRFKCIHKSWCTLINSP C5 -------MSQVRESETLEDRVVETLSRLPPKSLIRFKCIRKSWCTLINNP C6 MWNKIFEMSQARESETLEDKVVQILSRLPPKSLMRFKCTRKSWCTLINSS C7 ------------------------------------KCIRKSWCTLINSP C8 -------MSLVRESEIPEDRVVEILPRLSPKSLLRFKCIRKSWCTLINSP C9 -------MTQVRESETPEDRVAEILSRLPPKSLMRFKCIRKSWYKVIKNP C10 -------MSLVRESEIPEDRVVEILPRLSPKSLLRFKCIrKSWCTLINSP C11 -------MSQVSESETPEDKVVEILSKLPPKSLMRFKCIRKSWCTIINSP C12 ------------------------------KSLMRFKCIRKSWCSIINSP C13 -------MSQVHESETPEDKVVEILSRLSPKSLMRFKCVHRSWCTIISSP C14 ------------------------------KSLMRFKCIRKSWCTFINSP C1 ---------------LSSSTCILLNRCQNHVFPDRSWKPEVFWSLINLSI C2 SFVVKHLN-NSMDNKLSSSTCILVNRSQPHIFPDQNWKQEIFWSKINISI C3 SFVGKHLS-NFVDKKLSSSTCILLNRSHAHIFPDQSWKQEVFWSMINFSI C4 SFVAKHLN-NSMDNKLSSSTCILLNRSQAHIFPDQSWKQEVFWSTINLSI C5 SFVAKHLN-NSMDNKLSSSTCILLSRSQAHVFPDNSWKPEVFWSLINLSI C6 SFVAKHLS-NSIDNKLSSSTCILLNRSKMPVFLDKSWKYEILWSMIYLSI C7 RFVAKHLN-NSTDNKLSSSTRILLHRSQMPIFPCDSWKREFFWSMINLSI C8 SFVAKQLS-NSVDNKFSSSTCILLNRSQTHVFPDNSWKQEVFWSMINLSl C9 SFMAKHLSKNSVDNKFSSSTCILLHRSQMPVFPDRSWKREYFWSMINLSH C10 SFVAKHLN-NSVDNKRSSSTCILLNRSQFHIFPDQSWKREVLWSMINLSS C11 SFVAKHLS-NSVDNKFSSSTCILLNRSQVHVFPDKSWKHEVLWSMIKFFN C12 SFVAKHLS-NSADNKLSSSTCILLNRCQVHVFPDKNWKQDVFWSMINRSI C13 SFVAKHLS-NTVDNKFSSFTCILFNRCQVHVFPDRSWKRDVFWSMINLSI C14 SFVAKYLS-NSVHNKLSSSTCILLNRTQMHVFPDQSWKYETLWSMMNLSN ** * **. * : :* .** : :** : C1 DSDDHNLHYDVEDLN-IP-CPLEGHDFVEIGGYCNGIVCVLAWKTLHWIY C2 DSDEHNLHYDVVDLN-IP-FPLEDHDFVQIHGYCSGIVCVIVGKH----- C3 DNDENNLHYDVEDLN-IP-FPLNDHDFVLIFGYCNGIVCVEAGKN----- C4 DSDEHNLHYDVEDLI-IP-FPLEDHDFVLIFGYCNGIICVDAGKN----- C5 DSDEHNLHYDVEDLN-IP-FPLEGHDFVQIEGYCNGIVCVIAGTSLYLIN C6 DSDEHNHHYDVEDLN-IP-FPLEDHHPVQIHGYCNGIICVIAGKTV---- C7 DSDESNLHYDVEDLTNIPLLQWEDHHEVEIHGYCNGIVCVTVGEY----- C8 DSDEHNLHYDVEDLN-IP-FPLEDHDYVLILGYCNGIVCVTAGKN----- C9 DSDKHNLYYDVEDLN-IQ-FPLEDHDHVSIHGYCNGIVCLIVGKN----- C10 DSNVHNLHYDVKPLN-IP-FSRDDHNPVQIHGYCNGIVCLIEGDN----- C11 DRISRTLYYDVEDLN-IP-FPRDDHQHVLIHGYCNGIVCVISGKN----- C12 DSDEHNLHYDVEDLN-IP-FPMEDQDNVDLHGYCNGIVCVIVGKN----- C13 DSDEHNLHYDVEDRN-IP-FPIEVQDNVQLYGYCNGIVCVIVGEN----- C14 YSDEHNLHYDFKDLN-IP-FPTEDHHPVQIHSYCNGIVCVITGKSV---- . :**. * : :. * : .**.**:*: C1 VILCNPATGEFRQLPHSCLLQPSR-SRRKFELNTISTLLGFGYDCKAKEY C2 FLLCNPATREFKQLPDSCLLLP-T-AEGKFELDTTFEALGFGFDCKAKEY C3 VLLCNPATREFRQLPDSCLLLPSP-PEGKFELETSFQALGFGYDCNAKEY C4 VLLCNPATREFRQLPDSCLLLP-P-PKGKFELETTFQALGFGYDCNSKEY C5 VLLCNPATGKFRQLPPSCLLLPSR-PKGKFELESIFGGLGFGYDCKAKEY C6 IILCNPGTREFRQLPDSCLLVPLP-KE-KFQLETIFGGLGFGYDCKAKEY C7 FFLCNPATGEFSQLPNSRLLLPLPGGKGKFGLETTVKGLGFGYDCKAKEY C8 ILLCNPTTREFMRLPSSCLLLPSR-PKGKFELETVFRALGFGYDCKAKEY C9 AVLYNPATRELKQLPDSCLLLPSP-PEGKFKLESTFQGMGFGYDSQAKEY C10 VLLCNPSTREFRLLPNSCLLVPHP--EGKFQLETTFHGMGFGYDCKANEY C11 ILLCNPATREFRQLPDSFLVLPSP-LSGKFELETDLGGLGFGYDCRAKDY C12 VLLCNPATGEFRQLPDSSLLLPLP--KGRFGLETIFKGLGFGYDCKAKEY C13 VLLCNPATREFKQLPDSSLLLP-L-PMGKFGLETLFKGLGFGYDCKTKEY C14 RILCNPTTREFRQLPASCLLLPSP-PQGKFQLETIFEGLGFGYDYKAKEY .* ** * :: ** * *: * :* *:: :***:* .:::* C1 KVVQVIEN--CEYSDAEQYDYHRIALPHTAEVYTTTANSWREIKIDISSE C2 KVVQIIEN--CEYSDDEQTFYHCTTLPHTAEVYTTAANSWKEIKIDISSK C3 KVLRIIEN--CEYSDEERTFYHRIALPHTAELYTATANSWKEIKIDISSA C4 KVVRIIEN--CEYSDDEQTFHHRIALPHTAEVYTTAANSWKEIKIDISSQ C5 KVVQIIEN--CEYSDDQQYYYHRIALPHTAEVYTMAANSWREIKIDLSSE C6 KVVQIIEN--CEYSNDERTFYHSIPLPHTAEVYTIAANSWKEIKIDISTK C7 KVVRIIENYDCEYSDGEETYIKHTALPHTAEVYTTTANSWKEIQINISSK C8 KVVQIIEN--SEYSDDERTYYHRIPLPHTAEVYTTAANSWREIKIDISTK C9 KVVKIIEN--CEYSDDMRTFSHRIALPHTAEVYVMTTNSWRVIEIEISSD C10 KVVQIVEN--CEYSDDEQTYQHCIAYPYTAEVYTTAANFWKEIKIDISSS C11 KVVRIIEN--CEYSDDERTYYNRIPLPHTSEVYTMATNSWKEIKIDISRK C12 KVVRIIENCDCEYSEGEESYYERILLPHTAEVYTMNANSWKEIKIDVTSD C13 KVVRIIENCDCEYSDGKESYIERILLPYTAEVYTTAANSWKEIKIDTSSD C14 KVVQIIEN--CEYSDDERRYYHRIALPHTAEVYTTTANSWKEIKIEISSK **::::** .***: . . *:*:*:*. :* *: *:*: : C1 T-----YCYTCSVYLNGFCYWIATDEEDFILSFDLGDEIFHRIQLPSRRD C2 T-----YSWSCSVYLKGFCYWYATDDEEYVLSFDLGDETFHRIQLPSRGV C3 T-----YSCSRSVFLKGFCYWYATDGEEYVLSFDLGDDTFHIIQLPPRRE C4 T-----YHCSCSVYLNGFCYWFASDSEEYILSFYLGDETFHIIQLPSRRE C5 T-----FHCSYSVYLKGFCYWLATNGEKYILSFDFGDKVFHRIQLPSRRE C6 T-----YPSSCSVYLKGFCYWFASDGEECILSFDLGDEIFHRIQLPSRRE C7 ILSFYSYPYSCSLYLKGFCYWLSSDDEEYVFSFDLGDEIFDRIELPSRRE C8 T-----YSCSCQVYLKGFCYWYATDAEEYILSFDLGDEIFHRIQLPSRRE C9 T-----YNCSCSVYLKGFCYWFASDDEEYILSFDLGDEIFHRIQLPYRKE C10 T-----HPYPFSVYLKGFCYWFATDGEECILSFDLGDEIFHRIQLPSKIE C11 T-----YPCSCSVYLKGFCYWFTRDGEEFILSFDLGDERFHRIQLPSRRE C12 TDP-YCIPYSCSVYLKGFCYWFAMDNGEYIFSFDLGDELFHIIELPSRKE C13 TDP-YCIPYSCSLYLKGFCYWFANDNGEYIFSFDLGDEMFHRIELPFRRE C14 T-----YQCYGSEYLKGFCYWLANDGDEYILSFDLGDEIFHIIQLPSKRE . :*:***** : : . ::** :**. *. *:** : C1 SDFKFSNLFLCNKSIASFGYCCNPSDED------SToooooooooooooo C2 SGFTFFYIFLCNGSLASFCSRYDGSGDS---QSCEIWVMGDYGKVKSSWT C3 SGFRFYYIFLRNESLASFCSRYDRSEDS---ESCEIWVMDDYDRVKSSWT C4 SGFTFDYIFLRNESLASFCSPYNPSEDS---KLFEIWVMDDYDGVKSSWT C5 SDFEFSNLFLCNNSMASFFSCCDPSDEDS--TLCEIWVoooooooooooo C6 SSFKFYDIFLYNESITSYCSHYDPSDDS---KLFEIWVMDDYDGSKSSWT C7 SGFKLDGIFLYNESITYYCTSYEEC-SR----LFEIWVMDNYDGVKSSWT C8 SGFKFYYIFLCNESIASFCSCYoooooooooooooooooooooooooooo C9 SGFLFYNLFLYNESIASFCSHYDKSDNSGILEILEIWVMDDCDGVKSSWT C10 SGFNFCGLFLYNESITSYCCRYDPSEDS---KLFEIWVMDoooooooooo C11 SGLEFYYIFLCNESIASFCSLYDRSEDS---KLCEIWVMDDYDGVKSSWT C12 SGFKFYGLFLYNESITSYCSHYEESNSK----LFEIWVoooooooooooo C13 SDFKFCGLFLYNESVASYCSCY--EEDC---KLVEIWVMDDYDGVKSSWT C14 SGFKFYNIFLCNESIASFCCCYDPRNEDS--TLCEIWVMDoooooooooo *.: : :** * *:: : C1 oooooooooooooooooooooooooooooooooooooooooooooooooo C2 KLLTIESLQGIEKPLTFWKSDELLMLASNGKATSYNSSSGNLKYVHIPPI C3 KLLTIGPLQGIKKPLTFWKSDEVLMLDSDGRATSYNSNTRNLKYLHIPPI C4 KLLTVGPFKGIEYPLTLWKCDELLMLASDGRATSYNSSTGNLKYLHIPPI C5 oooooooooooooooooooooooooooooooooooooooooooooooooo C6 KLLTVGPFKGIEYPLALWKCDELLMLASNGRAISYNSSTGNLKYLHIPPI C7 Kooooooooooooooooooooooooooooooooooooooooooooooooo C8 oooooooooooooooooooooooooooooooooooooooooooooooooo C9 KLLTLGPFKDNENLLTFWKSDELLMVTSDKKTISYNSSTGNLKYIHIPPI C10 oooooooooooooooooooooooooooooooooooooooooooooooooo C11 KLLVAGPFKGIEKPLTLWKCDELLMIDTNGRVISYNSSIGYLSYLHIPLI C12 oooooooooooooooooooooooooooooooooooooooooooooooooo C13 KLLTVGPFKDIESPLKFWKCDEVLILSSYGKATSYNSSTGNLKYFHIPPI C14 oooooooooooooooooooooooooooooooooooooooooooooooooo C1 oooooooooooooooooooooooooooooooooooooooooooooooooo C2 LNKVVDFQALIYVESIVSLKooooooooooo------------------- C3 LKRVVDFEVLIYVKSooooooooooooooooooooooooooooooooooo C4 LNKVVDFEGLIYVKSIVPooooooooooooooooo--------------- C5 ooooooooooooooooooooo----------------------------- C6 INEVIDFEALSYVESIVPIK------------------------------ C7 oooooooooooooooooooooooooooooooooooooooooooooooo-- C8 oooooooooooooooooooooooo-------------------------- C9 INKVooooooooooooooooooo--------------------------- C10 oooooooooooooooooooooooooooo---------------------- C11 INRVIDSQALIYooooooooooooooo----------------------- C12 oooooooooooooooooooooooooooooooooooooooooooooo---- C13 INWMIDYVETIVSVKooooooooo-------------------------- C14 oooooooooooooooooooooooooooooooooooooooooooooooo-- C1 oooooooooooooooooooooooooooooooo C2 -------------------------------- C3 -------------------------------- C4 -------------------------------- C5 -------------------------------- C6 -------------------------------- C7 -------------------------------- C8 -------------------------------- C9 -------------------------------- C10 -------------------------------- C11 -------------------------------- C12 -------------------------------- C13 -------------------------------- C14 -------------------------------- PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427) -full_log S [0] -genepred_score S [0] nsd -run_name S [0] -mem_mode S [0] mem -extend D [1] 1 -extend_mode S [0] very_fast_triplet -max_n_pair D [0] 10 -seq_name_for_quadruplet S [0] all -compact S [0] default -clean S [0] no -do_self FL [0] 0 -do_normalise D [0] 1000 -template_file S [0] -setenv S [0] 0 -template_mode S [0] -flip D [0] 0 -remove_template_file D [0] 0 -profile_template_file S [0] -in S [0] -seq S [0] -aln S [0] -method_limits S [0] -method S [0] -lib S [0] -profile S [0] -profile1 S [0] -profile2 S [0] -pdb S [0] -relax_lib D [0] 1 -filter_lib D [0] 0 -shrink_lib D [0] 0 -out_lib W_F [0] no -out_lib_mode S [0] primary -lib_only D [0] 0 -outseqweight W_F [0] no -dpa FL [0] 0 -seq_source S [0] ANY -cosmetic_penalty D [0] 0 -gapopen D [0] 0 -gapext D [0] 0 -fgapopen D [0] 0 -fgapext D [0] 0 -nomatch D [0] 0 -newtree W_F [0] default -tree W_F [0] NO -usetree R_F [0] -tree_mode S [0] nj -distance_matrix_mode S [0] ktup -distance_matrix_sim_mode S [0] idmat_sim1 -quicktree FL [0] 0 -outfile W_F [0] default -maximise FL [1] 1 -output S [1] score_ascii html score_ascii -len D [0] 0 -infile R_F [1] input.prot.fasta.clustalw2_rs_0_0.fasta.aln -matrix S [0] default -tg_mode D [0] 1 -profile_mode S [0] cw_profile_profile -profile_comparison S [0] profile -dp_mode S [0] linked_pair_wise -ktuple D [0] 1 -ndiag D [0] 0 -diag_threshold D [0] 0 -diag_mode D [0] 0 -sim_matrix S [0] vasiliky -transform S [0] -extend_seq FL [0] 0 -outorder S [0] input -inorder S [0] aligned -seqnos S [0] off -case S [0] keep -cpu D [0] 0 -maxnseq D [0] 1000 -maxlen D [0] -1 -sample_dp D [0] 0 -weight S [0] default -seq_weight S [0] no -align FL [1] 1 -mocca FL [0] 0 -domain FL [0] 0 -start D [0] 0 -len D [0] 0 -scale D [0] 0 -mocca_interactive FL [0] 0 -method_evaluate_mode S [0] default -evaluate_mode S [1] t_coffee_fast -get_type FL [0] 0 -clean_aln D [0] 0 -clean_threshold D [1] 1 -clean_iteration D [1] 1 -clean_evaluate_mode S [0] t_coffee_fast -extend_matrix FL [0] 0 -prot_min_sim D [40] 40 -prot_max_sim D [90] 90 -prot_min_cov D [40] 40 -pdb_type S [0] d -pdb_min_sim D [35] 35 -pdb_max_sim D [100] 100 -pdb_min_cov D [50] 50 -pdb_blast_server W_F [0] EBI -blast W_F [0] -blast_server W_F [0] EBI -pdb_db W_F [0] pdb -protein_db W_F [0] uniprot -method_log W_F [0] no -struc_to_use S [0] -cache W_F [0] use -align_pdb_param_file W_F [0] no -align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble -external_aligner S [0] NO -msa_mode S [0] tree -master S [0] no -blast_nseq D [0] 0 -lalign_n_top D [0] 10 -iterate D [1] 0 -trim D [0] 0 -split D [0] 0 -trimfile S [0] default -split D [0] 0 -split_nseq_thres D [0] 0 -split_score_thres D [0] 0 -check_pdb_status D [0] 0 -clean_seq_name D [0] 0 -seq_to_keep S [0] -dpa_master_aln S [0] -dpa_maxnseq D [0] 0 -dpa_min_score1 D [0] -dpa_min_score2 D [0] -dpa_keep_tmpfile FL [0] 0 -dpa_debug D [0] 0 -multi_core S [0] templates_jobs_relax_msa_evaluate -n_core D [0] 0 -max_n_proc D [0] 0 -lib_list S [0] -prune_lib_mode S [0] 5 -tip S [0] none -rna_lib S [0] -no_warning D [0] 0 -run_local_script D [0] 0 -plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: set -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 401 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln Sinput.prot.fasta.clustalw2_rs_0_0.fasta.alnset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) input.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 14 SEQUENCES [PROTEIN] Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C10 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C11 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C12 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C13 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C14 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 401 type PROTEIN Struct Unchecked Input File input.prot.fasta.clustalw2