--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Sat Dec 10 13:37:26 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/443/zfh2-PA/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/443/zfh2-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/443/zfh2-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/443/zfh2-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -19328.36 -19338.04
2 -19328.37 -19337.83
--------------------------------------
TOTAL -19328.37 -19337.94
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/443/zfh2-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/443/zfh2-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/443/zfh2-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.192081 0.000064 0.176493 0.207238 0.191815 1396.52 1448.76 1.000
r(A<->C){all} 0.083195 0.000063 0.067956 0.098808 0.082950 1292.88 1396.94 1.000
r(A<->G){all} 0.272890 0.000224 0.245132 0.302959 0.272397 1241.14 1283.57 1.000
r(A<->T){all} 0.107482 0.000084 0.090202 0.125933 0.107150 1304.12 1402.56 1.000
r(C<->G){all} 0.074142 0.000080 0.057654 0.092547 0.073774 971.85 1004.71 1.000
r(C<->T){all} 0.348941 0.000277 0.317092 0.382405 0.348303 943.91 1049.80 1.000
r(G<->T){all} 0.113350 0.000127 0.092111 0.135803 0.112971 1036.32 1118.30 1.000
pi(A){all} 0.316168 0.000023 0.307094 0.325531 0.316217 1124.43 1171.89 1.000
pi(C){all} 0.247230 0.000019 0.238830 0.255861 0.247137 881.52 1137.05 1.000
pi(G){all} 0.206083 0.000017 0.197681 0.213915 0.206138 836.93 888.56 1.000
pi(T){all} 0.230519 0.000018 0.222830 0.239064 0.230512 1032.08 1085.00 1.000
alpha{1,2} 0.051572 0.001300 0.000142 0.117756 0.046256 1115.97 1274.60 1.000
alpha{3} 3.261378 0.884929 1.579835 5.105414 3.127914 1106.55 1303.77 1.000
pinvar{all} 0.141095 0.004194 0.006814 0.250225 0.141767 1270.37 1385.68 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -18614.00028
Model 2: PositiveSelection -18614.00028
Model 0: one-ratio -18624.452738
Model 3: discrete -18613.995362
Model 7: beta -18614.345931
Model 8: beta&w>1 -18614.020012
Model 0 vs 1 20.904915999999503
Model 2 vs 1 0.0
Model 8 vs 7 0.6518379999979516
>C1
MSSFDVETFNGKIVYNLDGSAHIIATDNTNGGGSGSGQNCYGSTTNSLKN
LSKDKGRGQEEKDIEHPSQYHREQSDNKRQEEAVDNRPGVESLGSACYKS
SPKIHSFRVVSAQDANSTCQDQIRAFKIQKPILMCFICKLSFGNVKSFSL
HANTEHRLNLEELDQQLLNREYSSAIIQRNMDEKPQISFLQPLANNDASA
DTNDTEKLQTATEGSDATLPSSPQPVFRNVSELEPENKQETEQNRLLNQD
REQEPESDQHTSSSKMAAPSAYIPLSSPKVAGKLTVKFGSLNSATAKTNN
LSKVSSTSSPPSTYASGEVLSPSTDNISNHKSTHCNQETEPPSSSSSEVE
MKIGSMSTSPQTNDSDVPCSGFLQMQHMTTGGAYTPQVSSFHASLAALAA
NESNDNRVKLITEFLQQQLQQHQSSLFPSPCPDHPDLNGVDCKTCELLDI
QQRSKSPSSSHHQFSQSLPQLQIQSQPQQTPHRSPCSNSVALPVSPSASS
VASVGNASTATSSFTIGACSEHINGRPQGVDCARCEMLLNSARLNSGVQM
STRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPR
LARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQN
MVAAAAAAAVTGKLLLSSSSPQVTAACPSNSGSGAGSGSSNIVGGTASLS
GNATPSVTGANSSNANAGSNTNNAGTKPKPSFRCDICSYDTSVARNLRIH
MTSEKHTHNMAVLQNNIKHIQAFNFLQQQQQSGTGNIASHSSGSFMPEVA
LADLAYNQALMIQLLHQQQQHQQSANTKLSPSSSPVSTPDQFSFSPKPIK
LNHGTGAAMGIGMAMGMGMSHSNEVSCELSGDPHPLTKTDKWPMAFYSCL
VCDCYSTNNLDDLNQHLLLDRSRQSSSASSEIMVIHNNNYICRLCNYKTN
LKANFQLHSKTDKHLQKLNFINHIREGGPQNEYKMQYQQQQLAANVVQLK
CNCCDFHTNSIQKLSLHTQQMRHDTMRMIFQHLLYIVQQSEMHNKSSGSA
EDDPQCACPDEDQQLQLQSSKKLLLCQLCNFTAQNIHEMVQHVKGIRHLQ
VEQFICLQRRSENQEIPALNEVFKVTEWVMENEDVSLAPGLNLARTTTND
ATTDASYAAASSAAVPAIPDVSMFSPTSPSSCATSCDKNLSQIVLPNVNN
LGSGVPTTVFKCNLCEYFVQSKSEIAAHIETEHSCAESDEFITIPTNTAA
LQAFQTAVAAAALAAVHQRCAVINPPTQDTVDEDKDLDTNVSDGPVGIKQ
ERLEQEVDRTTSMDVTKDLASQATDFGAPESPKVAETEVGVQCPLCLENH
FREKQYLEDHLTSVHSVTRDGLSRLLLLVDQKALKKESTDIACPTDKAPY
ANTNALERAPTPIENTCNVSLIKSTSANPSQSVSLQGLSCQQCEASFKHE
EQLLKHAQQNQHFSLQNGEYLCLAASHISRPCFMTFRTIPTMISHFQDLH
MSLIISERHVYKYRCKQCSLAFKTQEKLTTHMLYHSMRDATKCSFCQRNF
RSTQALQKHMEQAHAEDGTPSTRTNSPQTPMLSTEETHKHLLAESHAVER
EVSGSDVSPIELETHLNKETRHLSPTPMSLDSQSHQKHLATFAALLKQQQ
CNSDAGGLHPEALSMSTGEMPPQLQGLQNLQHIQQHFGAVAAAAGLPINP
VDMLNIMQFHHLMSLNFMNLAPPLVFGANAAGNAVSGPSALNNSITTSTA
TSASGLGDTHLTSGVSSIPVDSGKATAVPPQTQLNANANSQQLASNQKRA
RTRITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMKVVKHWFRNTLF
KERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTPLNDTCSVAVTGPMT
SSTISLPPSGNINLSSKENATSKVLAAGKANASGPVTFSATVPVSTPLSR
PESTNSSGNISDYIGNNIFFGQLGSKEQILPYSLDGQIKSEPQDDMIGAT
DFAYQTKQHSSFSFLKQQQDLVDPPEQCLTNQNADTAQDQSLLAGSSLAS
NCQSQQQINIFETKSESGSSDVLSRPPSPNSGAAGNVYGSMNDLLNQQLE
NMGSNMGPPKKMQIVGKTFEKNVAPMVTSGSVSTQFESNSSNSSSSSSST
SGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVV
WFQNARQKQRKIYENQPNNTLFENEETKKQNINYACKKCNLVFQRYYELI
RHQKNHCFKEENNKKSAKAQIAAAQIAQNLSSEDSNSSMDIHHVGICPPG
SAVASHTLSTPGSAAPLPGQYTQHSFGALPSPQHLFAKSSSLTDFSPSTT
PTPPQRERSNSLDQIQRPPKFDCDKCELNFNQLEKLREHQLLHLMNPGNI
CSDVGQNSNPEANFGPFGSILQSLQQAAAQQQQQHHQQPPTKKRKYSDCS
SNADEMQSLSELEASQKKHEYLYKYFMQNETSQEVKQQFLMQQQQKKLEQ
GNECDFELDFLTNFYQQNELKKVSNYDFLLQYYRTHEEAKSSQQHTFSSS
KKPTIEFLLQYYQLNESKKFFQLVASPQIIPDVPGYKPSLRIPKSTSDEA
PYIGETSLEQATELQREKQDEQLRIDRPSEENDLSMNKNKVENINNNNIN
VDQSNLTETNGGVPSVETKEECTQESSLIAMDDENKYLCTRSKQKDDKEK
SHYLHNLEDFLDATMIENNSQTLTFNDDEKACQKDELTQNSNAIEKRSSV
SPVNVSSKQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLK
KRVVQVWFQNSRAKDKKSRNQRHYAHISDDNSYDGSSGKEVYSDLRSNGI
TVDTDLETNLQDCQLCQVTQVNIRKHAFSVEHISKMKKLLEQTTELYAQS
NGSGSEDNDSDREKRFYNLSKAFLLQHVVTNATSHAIHTARQDSDVIAEG
NCILNYDTNGGDSKSHVQHNLPNEVVSEDARKIAGNQELMQQLFNRNHIT
VIGGK
>C2
MSSSDVETFNGKIVYNLDGSAHIIATDNTNGGGSGSGQNCYGSASNSLKN
LSKAKDRRQEEIDIEHPSQYHLEQSENERQEEAVDTRPGFESLGGACHKS
SPKIHSFRVVSAQDANSTCQDQIRAFKIQKPILMCFICKLSFGNVKSFSL
HANTEHRLNLEELDQQLLNREYSSAIIQRNMDEKPQISFLQPLGNNDASA
DSNDTEKLQTATEGSDATLPSSPHPVIRNDSELEPENKQETEQNRLLNQD
REQESESDQHTSSSKMAAPSAYIPLSSPKVAGKLTVKFGSLNSATAKTNN
LSKVSSTSSPPSTYASGEVLSPSTDNISNHKSTHCNQETEPPSSSSSEVE
MKIGSMSTSPQTNDSDVPCSGFLQMQHMTTGGAYTPQVSSFHASLAALAA
NESNDNRVKLITEFLQQQLQQHQSSLFPSPCPDHPDLNGVDCKTCELLDI
QQRSKSPSSSHHQFSQSLPQLQIQSQPQQTPHRSPCSNSVTLAVSPSASS
VASAGNASTATSSFTIGACSEHINGRPQGVDCARCEMLLNSARLNSGVQM
STRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPR
LARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQN
MVAAAAAAAVTGKLLLSSSSPQVTAAGSSNSGSGAGSGSSNIVGGTTSLS
GSATPSATGANSSNANAGSNTNNAGTKPKPSFRCDICSYDTSVARNLRIH
MTSEKHTHNMAVLQNNIKHIQAFNFLQQQQQSGTGNIAGHSSGSFMPEVA
LADLAYNQALMIQLLHQQQQHQQSANTKLSPSSSPVSTPDQFSFSPKPIK
LNHGTGAAMGIGMAMGMGMSHSNEVSGELSGDPHPLTKTEKWPTAFYSCL
ICDCFSTNNLDDLNQHLLLDRSRQSSSASSEIMVIHNNNYICRLCNYKTN
LKANFQLHSKTDKHLQKLNFINHIREGGPRNEYKMQYQQQLAANVVQLKC
NCCDFHTNSIQKLGLHTQQMRHDTMRMIFQHLLYIVQQSEMHNKSSGSAE
DDPQCACPDEDQQVQLQSSKKLLLCQLCNFTAQNIHEMVQHVKGIRHLQV
EQFICLQRRSENQEIPALNEVFKVTEWVMENEDVSFASGLNLARTATNDA
TDASYAAASSAAAPAIPDVSMFSPTSPSSCATSCDKNLSQIVSPNVNKLG
SGVPTTVFKCNLCEYFVQSKSEIASHIETEHSCAESDEFITIPTNTAALQ
AFQTAVAAAALAAVHQRCAVINPPIQETVDEDKDLDTNVSDAPLGIKQER
VEQEVDRTTSMEDIKDLASQATESGAPESPKVAETEVGVQCPLCLENHFR
EKQYLEDHLTSVHSVTRDGLSRLLLLVDQKALKKESTDIACPTDKAPYAN
TNAPERAPSPIENTCNVSLIKSTSANPSQSVSLQGLSCQQCEASFKHEEQ
LLKHAQQNQHFPLQNGEYLCLAASHVSRPCFMSFRTIPAMISHFQDMHIS
LIISERHVYKYRCKQCSLAFKTQEKLTTHMLYHSMRDATKCSFCQRNFRS
TQALQKHMEQAHAEDGTPSTRTNSPQTPMLSTEETNKHLLAESHAGEREV
SGSDVSPIELEAHLNKETRHLSPTPMSLDSQSHQQYLATFAALLKQQQCN
SDAVGLHPETLSMSTGEMPPQLQGLQNLQHIQQHFGAVAAASGLPINPVD
MLNIMQFHHLMSLNFMNLAPPLVFGANAAGNAVSGSSAQNNSITTATATS
ASGLGDTHLTTGVSSLPVDSGKATAVPPQTQLNANANSQQLASNQKRART
RITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMKVVKHWFRNTLFKE
RQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTPLNDTCSVAVTGPMTSS
TISLPPSGSTNLSSKENATSKVLAAGKANASGPVTFTATVPVSTPLSRPE
STNSSGNISDYIGNNIFFGQLGSKDQILPYSLDGQIKSEPQDDVIGATDF
AYQTKQHSNFSFLKQQQDLVDPPEQCLTNQNADTVQDQSLLAGAALASNC
QSQQQINIFETKSESGSSDVLSRPPSPNSGAAGNMYGSMNDLINQQLENM
GSNMGPPKKMQIVGKTFEKNVAPMVTSGSVSTQFESNSSNSSSSSSSTSG
GKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWF
QNARQKQRKIYENQPNNTLFENEETKKQNINYACKKCNLVFQRYYELIRH
QKNHCFKEENNKKSAKAQIAAAQIAQNLSSEDSNSSMDIHHVGICPPGSA
VVSQTLSTPGSAAPLSGQYTQHSFGALPSPQHLFAKSSSLTDFSPSTTPT
PPQRERSNSLDHPQRPPKFDCDKCELKFNQSEKLREHQLLHLMNPGNIFS
DASQNSNPEANFGPFGSILQSLQQAAAQQQQLQHQPPPTKKRKYSDCSSN
ADEMQSLSELEASQKKHEFLYKYFMQNETSQEVKQQFLMQQQQKKLEQGN
DCDFELDFLTNFYQQSELKKVSNYDFLLQYYRTHEEAKSSQQHLFSSSKK
PTIEFLLQYYQLNESKKFFQLVASPQIIPDVPGYKPSSRMPKSTSDEAPY
IGETSLEQATELQREKQDEQLRIDRPSEENELSMNKNKVENINNNNIGIH
VGQSNLTATNGIPSVETKDESTQESSLIAIDNENKYLCARSKQKDDKEKS
HYLHNLEDFLDATMIENNSQTLTFNDDEKACQKDELTQNSNAIEKRSSVS
PVNVSSKQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKK
RVVQVWFQNSRAKDKKSRNQRHYAHISDDNSYDGSSGKEAYSDLRSNGIT
VDTDLETNLQDCQLCQVTQVNIRKHAFSVEHISKMKKLLEQTTELYAQSN
GSGSEDNDSDREKRFYNLSKAFLFQHVVTNATSHSIHTARQDSDAIAEGN
CMLNYDTNGGDSKSHVQHNLPNEVVSEDTRKIAGNQELMQQLFNRNHITV
IGGKo
>C3
MSSSDVETFDGKIVYNLDGSAYIIATDNANVGRSGSGQICYASTSDSLKN
LSKGKDRGQGENEIEHPPLEQSENKRQEEDESSVGASYKSSPKIHSFRVV
SAQDANSTCQEQIRAFKIQKPILMCFICKLSFGNVKSFSLHANTEHRLNL
EELDQQLLNREYSSAIIQRNMDEKPQISFLQPLGKDASTDSNDTEKLQTA
TEGSDQALPLSPQPVISNDSELEPENKQETEQNPPLNEDREQESETDQYT
SSNKMAAPSAYLPLSSPKVAGKLTVKFGSLNSATAKTNNLSKVSSTSSPT
STYASGEVLSPSTDNISNHKSTHCNQETEPPSSSSSEVEMKIGSMSTSPQ
TNDSDVPCSGFSQLQHMTTGGVYTPQVSSFHASLAALAANESNENRVKVI
TEFLQQQLQQHQHQSSLFPSPCPDHPDLKSMDCKTCELFDIQQRSKSPSS
SHHQISQSLPQLQIQSQPQQTPHRSPCSNSVTLAISPSTSSVASAGNASS
ATSSFTIGACSEHINGRPQGVDCARCEMLLNSARLNSGVQMSTRNSCKTL
KCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPRLARGESYSC
GYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQNMVAAAAAAA
ATGKLLLSPQVTAAGPSNSGSGASSGSSNIVGSNASLSGNATPAATGANS
SNATAGISTNSGGTKPKPSFRCDICSYETSVARNLRIHMTSEKHTHNMAV
LQNNIKHIQAFNFLQQQQQSVTGNIAGHSSGSFMPEVALADLAYNQALMI
QLLHQQQQQQHQQTANTKLSPSSSPVSTTDQFSFSPKPMKLSHGTGACLG
LGMAMGMSHLNEVPGDLSGDPHPLTKTDKWPTAFYSCLICDCFSTNNLDD
MNQHLLVDRSRQSSSASSEIMVIHNNNYICRLCNYKTNLKANFQLHSKTD
KHLQKLNFINHIREGGPRNEYKMQYQQQLAANVVQLKCNCCDFHTNSIQK
LGLHTQQMRHDTMRMIFQHLLYIVQQSEMHNKSSGSAEDDPQCSCPDEDQ
QLQSSKKLLLCQLCNVTATNLHEMVQHVKGMRHMQVEQFICLQRRSENQE
IPALNEVFKVTEWIMDNEDVSFASGLNLARATTNDATTDTSYAEASSAAG
VPAIPDVSMFSPTSPSSCATSCDKNLSQIVSPSVNNLDAGVPTTVFKCNL
CEYFVQSKSDIASHIETEHSCAESDEFISIPTNTAALQAFQTAVAAAALA
AVHQRCAAINPPTVEEDKDLDTNVSDGPVAVKQEPVEQEVNRMTSMEETK
DLVSQVTESAAQESPKVSESQVGVQCPLCLENHFREKQYLEAHLTSVHSV
TRDGLSRLLLLVDQKAWKKENENTDIACPSAKAPFAKTNTLERAPTSIEN
TCNVSPTKSISANLSLSVGLQGLFCHQCEASFKHEEQLLQHAQQNQHFPL
QNGEYLCLATSHISRPCFMSFRTIPAMVSHFQDSHMSLVISERHVYKYRC
KQCSLAFKTQEKLTTHMLYHTMRDATKCSLCQRNFRSTQALQKHMEQAHA
EEVTPSTRTNSPQTPVLNTEETHKHFPSESHAVEREVSVSDVSPLQLESQ
LNKETRQLSPTPISLDSQSHQQYLATFAALLKQQQCNSDTGALHPEVLSI
SAGEVSHHLQGLQNLQHMQQQFGAVAAASGLSINPVDMLNIMQFHHLMSL
NFMNLAPPLVFGANAAGNAVSPSSAQNNSIKTSTASSALVLGDTQILTSG
VSSLPVDSVKAITVPAQTQLTVNASSQQLASNQKRARTRITDDQLKILRA
HFDINNSPSEESIMEMSQKANLPMKVVKHWFRNTLFKERQRNKDSPYNFN
NPPSTTLNIEEYERTGQAKVTPLNDTSRVAVTAPITASTILLAPSGNANL
ISKESPTTKVLAAGKVIATGPATLSTTVAVSMPVSRPESTTSSGNISDYL
GNNIFFGQPGGKDQVLPCSVDGQIKSEPQDDMIGANDSAYQTKQHPTFSF
LKHQQELTDPPEQCLTNQNADTVQDQSLLAGSALASHCQNQQQINIFETK
SESGSSDVMSRPPSPSSGAAGNIYGSMNDLINQQLENMGSNMGPPKNLQT
VGKTFEKNAAPMPTSGSISAQFESNSSNSSSSSSSTSGGKRANRTRFTDY
QIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRKIYE
NQPNNTLFENEETKKQNINYACKKCNLVFQRYYELIRHQKNHCFKEENNK
KSAKAQIAAAQIAQNLSSEDSNSSMDIHHGGIGQPGTAVVSQTLSTPGSA
ASLPGQYAQHSFGALPSPQHLFAKSSSLTDFSPSTTPTPPQRERSNSLDH
PQRPPKFDCDKCDLKFNHLEKLREHQLLHLMNQGNIFSDAGQNTNPEAHF
GPFGSILQSLQQAAAQQQQPHHQPPPTKKRKYSDCSSNADEMQSLSEIEV
SHKKHEFLYKYFMQNETSSELKQQFLMQQQHKKVEQGNESEFELDFLTNF
YQQSELKKVSNYDFLLSYYRTHEESKSSPQHIFSSSKKPTIEFLLQYYQL
NESKKFFQLVASPQIIPDLPGYKPSSRMPKPASDEAPNIGETSLEQATKL
QREEQLRIDRPSEENDLSITKNKVENINNNNISINEGQNDLTETNGSPSG
ETKEEFPQESSLIETDNDNKYLCTRSKQKNEKEKSQYLHNLEDFLDATMI
ENNSQTLTFNDDEKACQKDEPIQNSNEMEQRSSVSPVNVSSKQNKRLRTT
ILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDK
KSRNQRHYAHISDDNSYDGSSGKEVVSDLRSNGVAVETDHETNLQDCQLC
QVTQVNIRKHAFSVEHICKMKKLLEQTTELYAQSNGSGSDDNDSDREKRF
YNLSKAFLLQHVVSNATSHAIHTPRQDPDAIAEGNCVLTYETNGGDSKGH
IHHNLPNEAVPEDAGKIASNQELMQQLFNRNHITVIGGKooooooooooo
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>C4
MSSSDVETFNGKIVYNLDGSAYIIATDNANGCGSGSGQICYASTSNSLIN
LPTAKDRGQGEKEIEHPPQYHLEQSENKRQEKAVHTRPGVESLGGASYKS
SPKIHSFRVVTAQDANSTCQDQIRAFKIQKPILMCFICKLSFGNVKSFSL
HANTEHRLNLEELDQQLLNREYSSAIIQRNMDEKPQISFLQPLANDNASA
DSDDTEKLQTAIEGSDATLPPSPQPVITNDSELEPENKQETEQNQLVNQD
REQESETDQHTSNSKMAAPSAYLPLSSPKIAGKLTVKFGSLNSATAKTNN
LSKVSSTSSPSSTYASGEVLSPSTDNISNHKSTHCNQETEPPSSSSSEVE
MKIGSMSTSPQTNDSDVPCSGFLQLQHMTTGGVYTPQVSSFHSSLAALAA
NESNENRVKLITEFLQQQLQQHQSSLFPSPCPDHPDLKGMDCKTCELLDI
QQRSKSPSSSHHQFSQSLPQLQIQSQSQQTPHRSPCSNSVTLAISPSTSS
VASAGNASSATSSFTIGACSDHINGRPQGVDCARCEMLLNSARLNSGVQM
STRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPR
LARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQN
MVAAAAAAAATGKLLLSSSPQVPAAGPSNSGSGAGSCSSNIVGGNASLSG
NATPAATGANSSNANTGSSTNNAGTKPKPSFRCDICSYETSVARNLRIHM
TSEKHTHNMAVLQNNIKHIQAFNFLQQQQQSVAGNIAGHSSGSFMPEVAL
ADLAYNQALMIQLLHQQQQQQQHQQTANTKLSPSSSPVSTTDQFTFSPKP
MKLSHGTGAGASLGLGMAMGMGMSHSNEVPGDLSGDPHPLTKTDKWPTAF
YSCLICDCFSTNNLDDMNQHLLVDRSRQSSSSSSEVMVIHNNNYICRLCN
YKTNLKANFQLHSKTDKHLQKLNFINHIREGGPRNEYKMQYQQQLATNVV
QLKCNCCDFHTNSIQKLGLHTQQMRHDTMRMIFQHLLYIVQQSEMHNKSS
GSAEDDPQCSCPDEDQQLQSSKKLLLCQLCNVTATNLHEMVQHVKGMRHM
QVEQFICLQRRSENQEIPALNEVFKVTEWIMDNEDVSFASGLNLARATTN
DATSDASYAEASSAAGAPAIPDVNMFSPTSPSSCATSCDKNVSQIISPSV
NNLGSGVPTTVFKCNLCEYFVQSKSDIASHIETEHSCAEGDEFISIPTNT
AALQAFQTAVAAAALAAVHQRCAAINPPTVEEDKDIDTNVSDGPVAIKQE
RIEQEVDRMTSMEETKDLASQATESAAPKSSKAIEAQIGVQCPLCLENHF
REKQYLEAHLTSVHSVTKDGLSRLLLLVDQKAWKKESESTDLPCLSAKTP
YANTNALERSPTPTENTSNISQIKSTSANPNLPVALQGLSCHQCEASFKH
EEQLLQHAQQNQHYPLQNGEYLCLATSHISRPCFMSFRTIAAMVSHFQDS
HMSLVISERHVYKYRCKQCSLAFKTQEKLTTHMLYHTMRDATKCSLCQRN
FRSTQALQKHMDQAHAEEVTPSTRTNSPHTPILNTEETQQHLPSESHGVE
RAVAVNDVSQLELEMQLNKETRQLSPTPMSLDPQSHQQYLATFAALLKQQ
QCNPDAGGLHPEALSMSAGELSHHLQGLQNLQHMQQQFGAVAAASGLSIN
PVDMLNIMQFHHLMSLNFMNLAPPLVFGANATGNALSASSAQNNSITNST
ATSALGLGDTHLTSGVSSLPVDSVKATTVPAQTQLTVNANSQQLASNQKR
ARTRITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMKVVKHWFRNTL
FKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTPLNDTCSVAVTAPM
SASTISLPPSGNTNLISKENSTTKVLAAGKVLATGPVTFPATVPVSTPVS
RPESTNSSGNISDYLGNNIFFGQPGGKDQVLPYSVDGQIKSEPQDDMIGA
NDSAYQTKPHSNFSFLRHQQDLADPPEQGLTNQNADTVQDQSLLAGSALA
SHCQSQQQINIFETKSESGSSDVMSRPPSPSCGATGNIYGSMNDLINQQL
ENMGSNMGPPKNLQIIGKTFEKNVAPVATTGSASTQFESNSSNSSSSSSS
TSGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIV
VWFQNARQKQRKIYENQPNNSLFENEETKKQNINYACKKCNLVFQRYYEL
IRHQKNHCFKEENNKKSAKAQIAAAQIAQNLSSEDSNSSIDIHHVGICPP
GSAVVSQTLSTPGSAAPLPGQYAQHSFGALPSPQHLFAKSSSLTDFSPST
TPTPPHRERSNSLDHPQRPPKFDCDKCDLKFSHLEKLREHQLLHLMNQGS
IFSDAGQSSNPDANFGPFGSILQSLQQAAAQQKQPHHQPPPTKKRKYSDC
SSNADEMQSLSEHEVSQKKHEFLYKYFMQNETSPEVKKQFLMQQQHKKLE
QGNESDFELDFLTNFYQQSELKKVSSYDYLLQYYRTHEEAKSSQQQIFSS
SKKPTIEFLLQYYQLNESKKFFQLVASPQIIPDLPGYKPSSGLQKPESDD
GPNIGETSLEQATELQREEHLCVDRPSAKNDLSMNKNKVENINNNNISIS
VGQSDSTETNGSPSGETKEEFPQEPSLIAIDDDNKYLCTTSKQNDEKEKS
QYLHNLEDFLDATMIENNSQTLTFNDDEKACQKDEPIQNSNEMEKRSSVS
PVNVSSKQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKK
RVVQVWFQNSRAKDKKSRNQRHYAHISDDNSYDGSSGKDVASDPKSNGVN
GVDTDHETNLQDCQLCQVSQVNIRKHAFSVEHICKMKKLLDQTTELYAQS
NGSGSDDNESDREKRFYNLSKAFLFQHVVSNATSHAIHAPRQDSDAIAEG
NCMLTYDTNGGDSKSQIQHNLPNEVVPEDARKIASNQELMQQLFNRNHLT
VIGGK
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=4, Len=3035
C1 MSSFDVETFNGKIVYNLDGSAHIIATDNTNGGGSGSGQNCYGSTTNSLKN
C2 MSSSDVETFNGKIVYNLDGSAHIIATDNTNGGGSGSGQNCYGSASNSLKN
C3 MSSSDVETFDGKIVYNLDGSAYIIATDNANVGRSGSGQICYASTSDSLKN
C4 MSSSDVETFNGKIVYNLDGSAYIIATDNANGCGSGSGQICYASTSNSLIN
*** *****:***********:******:* ***** **.*:::** *
C1 LSKDKGRGQEEKDIEHPSQYHREQSDNKRQEEAVDNRPGVESLGSACYKS
C2 LSKAKDRRQEEIDIEHPSQYHLEQSENERQEEAVDTRPGFESLGGACHKS
C3 LSKGKDRGQGENEIEHPP---LEQSENKRQE-------EDESSVGASYKS
C4 LPTAKDRGQGEKEIEHPPQYHLEQSENKRQEKAVHTRPGVESLGGASYKS
*.. *.* * * :****. ***:*:*** ** .*.:**
C1 SPKIHSFRVVSAQDANSTCQDQIRAFKIQKPILMCFICKLSFGNVKSFSL
C2 SPKIHSFRVVSAQDANSTCQDQIRAFKIQKPILMCFICKLSFGNVKSFSL
C3 SPKIHSFRVVSAQDANSTCQEQIRAFKIQKPILMCFICKLSFGNVKSFSL
C4 SPKIHSFRVVTAQDANSTCQDQIRAFKIQKPILMCFICKLSFGNVKSFSL
**********:*********:*****************************
C1 HANTEHRLNLEELDQQLLNREYSSAIIQRNMDEKPQISFLQPLANNDASA
C2 HANTEHRLNLEELDQQLLNREYSSAIIQRNMDEKPQISFLQPLGNNDASA
C3 HANTEHRLNLEELDQQLLNREYSSAIIQRNMDEKPQISFLQPLGKD-AST
C4 HANTEHRLNLEELDQQLLNREYSSAIIQRNMDEKPQISFLQPLANDNASA
*******************************************.:: **:
C1 DTNDTEKLQTATEGSDATLPSSPQPVFRNVSELEPENKQETEQNRLLNQD
C2 DSNDTEKLQTATEGSDATLPSSPHPVIRNDSELEPENKQETEQNRLLNQD
C3 DSNDTEKLQTATEGSDQALPLSPQPVISNDSELEPENKQETEQNPPLNED
C4 DSDDTEKLQTAIEGSDATLPPSPQPVITNDSELEPENKQETEQNQLVNQD
*::******** **** :** **:**: * ************** :*:*
C1 REQEPESDQHTSSSKMAAPSAYIPLSSPKVAGKLTVKFGSLNSATAKTNN
C2 REQESESDQHTSSSKMAAPSAYIPLSSPKVAGKLTVKFGSLNSATAKTNN
C3 REQESETDQYTSSNKMAAPSAYLPLSSPKVAGKLTVKFGSLNSATAKTNN
C4 REQESETDQHTSNSKMAAPSAYLPLSSPKIAGKLTVKFGSLNSATAKTNN
****.*:**:**..********:******:********************
C1 LSKVSSTSSPPSTYASGEVLSPSTDNISNHKSTHCNQETEPPSSSSSEVE
C2 LSKVSSTSSPPSTYASGEVLSPSTDNISNHKSTHCNQETEPPSSSSSEVE
C3 LSKVSSTSSPTSTYASGEVLSPSTDNISNHKSTHCNQETEPPSSSSSEVE
C4 LSKVSSTSSPSSTYASGEVLSPSTDNISNHKSTHCNQETEPPSSSSSEVE
**********.***************************************
C1 MKIGSMSTSPQTNDSDVPCSGFLQMQHMTTGGAYTPQVSSFHASLAALAA
C2 MKIGSMSTSPQTNDSDVPCSGFLQMQHMTTGGAYTPQVSSFHASLAALAA
C3 MKIGSMSTSPQTNDSDVPCSGFSQLQHMTTGGVYTPQVSSFHASLAALAA
C4 MKIGSMSTSPQTNDSDVPCSGFLQLQHMTTGGVYTPQVSSFHSSLAALAA
********************** *:*******.*********:*******
C1 NESNDNRVKLITEFLQQQLQQHQ--SSLFPSPCPDHPDLNGVDCKTCELL
C2 NESNDNRVKLITEFLQQQLQQHQ--SSLFPSPCPDHPDLNGVDCKTCELL
C3 NESNENRVKVITEFLQQQLQQHQHQSSLFPSPCPDHPDLKSMDCKTCELF
C4 NESNENRVKLITEFLQQQLQQHQ--SSLFPSPCPDHPDLKGMDCKTCELL
****:****:************* **************:.:*******:
C1 DIQQRSKSPSSSHHQFSQSLPQLQIQSQPQQTPHRSPCSNSVALPVSPSA
C2 DIQQRSKSPSSSHHQFSQSLPQLQIQSQPQQTPHRSPCSNSVTLAVSPSA
C3 DIQQRSKSPSSSHHQISQSLPQLQIQSQPQQTPHRSPCSNSVTLAISPST
C4 DIQQRSKSPSSSHHQFSQSLPQLQIQSQSQQTPHRSPCSNSVTLAISPST
***************:************.*************:*.:***:
C1 SSVASVGNASTATSSFTIGACSEHINGRPQGVDCARCEMLLNSARLNSGV
C2 SSVASAGNASTATSSFTIGACSEHINGRPQGVDCARCEMLLNSARLNSGV
C3 SSVASAGNASSATSSFTIGACSEHINGRPQGVDCARCEMLLNSARLNSGV
C4 SSVASAGNASSATSSFTIGACSDHINGRPQGVDCARCEMLLNSARLNSGV
*****.****:***********:***************************
C1 QMSTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQH
C2 QMSTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQH
C3 QMSTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQH
C4 QMSTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQH
**************************************************
C1 PRLARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSS
C2 PRLARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSS
C3 PRLARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSS
C4 PRLARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSS
**************************************************
C1 QNMVAAAAAAAVTGKLLLSSSSPQVTAACPSNSGSGAGSGSSNIVGGTAS
C2 QNMVAAAAAAAVTGKLLLSSSSPQVTAAGSSNSGSGAGSGSSNIVGGTTS
C3 QNMVAAAAAAAATGKLLLS---PQVTAAGPSNSGSGASSGSSNIVGSNAS
C4 QNMVAAAAAAAATGKLLLSSS-PQVPAAGPSNSGSGAGSCSSNIVGGNAS
***********.******* ***.** .*******.* ******..:*
C1 LSGNATPSVTGANSSNANAGSNTNNAGTKPKPSFRCDICSYDTSVARNLR
C2 LSGSATPSATGANSSNANAGSNTNNAGTKPKPSFRCDICSYDTSVARNLR
C3 LSGNATPAATGANSSNATAGISTNSGGTKPKPSFRCDICSYETSVARNLR
C4 LSGNATPAATGANSSNANTGSSTNNAGTKPKPSFRCDICSYETSVARNLR
***.***:.********.:* .**..***************:********
C1 IHMTSEKHTHNMAVLQNNIKHIQAFNFLQQQQQSGTGNIASHSSGSFMPE
C2 IHMTSEKHTHNMAVLQNNIKHIQAFNFLQQQQQSGTGNIAGHSSGSFMPE
C3 IHMTSEKHTHNMAVLQNNIKHIQAFNFLQQQQQSVTGNIAGHSSGSFMPE
C4 IHMTSEKHTHNMAVLQNNIKHIQAFNFLQQQQQSVAGNIAGHSSGSFMPE
********************************** :****.*********
C1 VALADLAYNQALMIQLLHQQ---QQHQQSANTKLSPSSSPVSTPDQFSFS
C2 VALADLAYNQALMIQLLHQQ---QQHQQSANTKLSPSSSPVSTPDQFSFS
C3 VALADLAYNQALMIQLLHQQQQQQ-HQQTANTKLSPSSSPVSTTDQFSFS
C4 VALADLAYNQALMIQLLHQQQQQQQHQQTANTKLSPSSSPVSTTDQFTFS
******************** * ***:**************.***:**
C1 PKPIKLNHGT--GAAMGIGMAMGMGMSHSNEVSCELSGDPHPLTKTDKWP
C2 PKPIKLNHGT--GAAMGIGMAMGMGMSHSNEVSGELSGDPHPLTKTEKWP
C3 PKPMKLSHGT--GACLGLGMAMGM--SHLNEVPGDLSGDPHPLTKTDKWP
C4 PKPMKLSHGTGAGASLGLGMAMGMGMSHSNEVPGDLSGDPHPLTKTDKWP
***:**.*** **.:*:****** ** ***. :***********:***
C1 MAFYSCLVCDCYSTNNLDDLNQHLLLDRSRQSSSASSEIMVIHNNNYICR
C2 TAFYSCLICDCFSTNNLDDLNQHLLLDRSRQSSSASSEIMVIHNNNYICR
C3 TAFYSCLICDCFSTNNLDDMNQHLLVDRSRQSSSASSEIMVIHNNNYICR
C4 TAFYSCLICDCFSTNNLDDMNQHLLVDRSRQSSSSSSEVMVIHNNNYICR
******:***:*******:*****:********:***:***********
C1 LCNYKTNLKANFQLHSKTDKHLQKLNFINHIREGGPQNEYKMQYQQQQLA
C2 LCNYKTNLKANFQLHSKTDKHLQKLNFINHIREGGPRNEYKMQY-QQQLA
C3 LCNYKTNLKANFQLHSKTDKHLQKLNFINHIREGGPRNEYKMQY-QQQLA
C4 LCNYKTNLKANFQLHSKTDKHLQKLNFINHIREGGPRNEYKMQY-QQQLA
************************************:******* *****
C1 ANVVQLKCNCCDFHTNSIQKLSLHTQQMRHDTMRMIFQHLLYIVQQSEMH
C2 ANVVQLKCNCCDFHTNSIQKLGLHTQQMRHDTMRMIFQHLLYIVQQSEMH
C3 ANVVQLKCNCCDFHTNSIQKLGLHTQQMRHDTMRMIFQHLLYIVQQSEMH
C4 TNVVQLKCNCCDFHTNSIQKLGLHTQQMRHDTMRMIFQHLLYIVQQSEMH
:********************.****************************
C1 NKSSGSAEDDPQCACPDEDQQLQLQSSKKLLLCQLCNFTAQNIHEMVQHV
C2 NKSSGSAEDDPQCACPDEDQQVQLQSSKKLLLCQLCNFTAQNIHEMVQHV
C3 NKSSGSAEDDPQCSCPDEDQ--QLQSSKKLLLCQLCNVTATNLHEMVQHV
C4 NKSSGSAEDDPQCSCPDEDQ--QLQSSKKLLLCQLCNVTATNLHEMVQHV
*************:****** ***************.** *:*******
C1 KGIRHLQVEQFICLQRRSENQEIPALNEVFKVTEWVMENEDVSLAPGLNL
C2 KGIRHLQVEQFICLQRRSENQEIPALNEVFKVTEWVMENEDVSFASGLNL
C3 KGMRHMQVEQFICLQRRSENQEIPALNEVFKVTEWIMDNEDVSFASGLNL
C4 KGMRHMQVEQFICLQRRSENQEIPALNEVFKVTEWIMDNEDVSFASGLNL
**:**:*****************************:*:*****:*.****
C1 ARTTTNDATTDASYAAASSAA-VPAIPDVSMFSPTSPSSCATSCDKNLSQ
C2 ARTATNDAT-DASYAAASSAA-APAIPDVSMFSPTSPSSCATSCDKNLSQ
C3 ARATTNDATTDTSYAEASSAAGVPAIPDVSMFSPTSPSSCATSCDKNLSQ
C4 ARATTNDATSDASYAEASSAAGAPAIPDVNMFSPTSPSSCATSCDKNVSQ
**::***** *:*** ***** .******.*****************:**
C1 IVLPNVNNLGSGVPTTVFKCNLCEYFVQSKSEIAAHIETEHSCAESDEFI
C2 IVSPNVNKLGSGVPTTVFKCNLCEYFVQSKSEIASHIETEHSCAESDEFI
C3 IVSPSVNNLDAGVPTTVFKCNLCEYFVQSKSDIASHIETEHSCAESDEFI
C4 IISPSVNNLGSGVPTTVFKCNLCEYFVQSKSDIASHIETEHSCAEGDEFI
*: *.**:*.:********************:**:**********.****
C1 TIPTNTAALQAFQTAVAAAALAAVHQRCAVINPPTQDTVDEDKDLDTNVS
C2 TIPTNTAALQAFQTAVAAAALAAVHQRCAVINPPIQETVDEDKDLDTNVS
C3 SIPTNTAALQAFQTAVAAAALAAVHQRCAAINPP---TVEEDKDLDTNVS
C4 SIPTNTAALQAFQTAVAAAALAAVHQRCAAINPP---TVEEDKDIDTNVS
:****************************.**** **:****:*****
C1 DGPVGIKQERLEQEVDRTTSMDVTKDLASQATDFGAPESPKVAETEVGVQ
C2 DAPLGIKQERVEQEVDRTTSMEDIKDLASQATESGAPESPKVAETEVGVQ
C3 DGPVAVKQEPVEQEVNRMTSMEETKDLVSQVTESAAQESPKVSESQVGVQ
C4 DGPVAIKQERIEQEVDRMTSMEETKDLASQATESAAPKSSKAIEAQIGVQ
*.*:.:*** :****:* ***: ***.**.*: .* :*.*. *:::***
C1 CPLCLENHFREKQYLEDHLTSVHSVTRDGLSRLLLLVDQKALKKE--STD
C2 CPLCLENHFREKQYLEDHLTSVHSVTRDGLSRLLLLVDQKALKKE--STD
C3 CPLCLENHFREKQYLEAHLTSVHSVTRDGLSRLLLLVDQKAWKKENENTD
C4 CPLCLENHFREKQYLEAHLTSVHSVTKDGLSRLLLLVDQKAWKKESESTD
**************** *********:************** *** .**
C1 IACPTDKAPYANTNALERAPTPIENTCNVSLIKSTSANPSQSVSLQGLSC
C2 IACPTDKAPYANTNAPERAPSPIENTCNVSLIKSTSANPSQSVSLQGLSC
C3 IACPSAKAPFAKTNTLERAPTSIENTCNVSPTKSISANLSLSVGLQGLFC
C4 LPCLSAKTPYANTNALERSPTPTENTSNISQIKSTSANPNLPVALQGLSC
:.* : *:*:*:**: **:*:. ***.*:* ** *** . .*.**** *
C1 QQCEASFKHEEQLLKHAQQNQHFSLQNGEYLCLAASHISRPCFMTFRTIP
C2 QQCEASFKHEEQLLKHAQQNQHFPLQNGEYLCLAASHVSRPCFMSFRTIP
C3 HQCEASFKHEEQLLQHAQQNQHFPLQNGEYLCLATSHISRPCFMSFRTIP
C4 HQCEASFKHEEQLLQHAQQNQHYPLQNGEYLCLATSHISRPCFMSFRTIA
:*************:*******:.**********:**:******:****.
C1 TMISHFQDLHMSLIISERHVYKYRCKQCSLAFKTQEKLTTHMLYHSMRDA
C2 AMISHFQDMHISLIISERHVYKYRCKQCSLAFKTQEKLTTHMLYHSMRDA
C3 AMVSHFQDSHMSLVISERHVYKYRCKQCSLAFKTQEKLTTHMLYHTMRDA
C4 AMVSHFQDSHMSLVISERHVYKYRCKQCSLAFKTQEKLTTHMLYHTMRDA
:*:***** *:**:*******************************:****
C1 TKCSFCQRNFRSTQALQKHMEQAHAEDGTPSTRTNSPQTPMLSTEETHKH
C2 TKCSFCQRNFRSTQALQKHMEQAHAEDGTPSTRTNSPQTPMLSTEETNKH
C3 TKCSLCQRNFRSTQALQKHMEQAHAEEVTPSTRTNSPQTPVLNTEETHKH
C4 TKCSLCQRNFRSTQALQKHMDQAHAEEVTPSTRTNSPHTPILNTEETQQH
****:***************:*****: *********:**:*.****::*
C1 LLAESHAVEREVSGSDVSPIELETHLNKETRHLSPTPMSLDSQSHQKHLA
C2 LLAESHAGEREVSGSDVSPIELEAHLNKETRHLSPTPMSLDSQSHQQYLA
C3 FPSESHAVEREVSVSDVSPLQLESQLNKETRQLSPTPISLDSQSHQQYLA
C4 LPSESHGVERAVAVNDVSQLELEMQLNKETRQLSPTPMSLDPQSHQQYLA
: :***. ** *: .*** ::** :******:*****:***.****::**
C1 TFAALLKQQQCNSDAGGLHPEALSMSTGEMPPQLQGLQNLQHIQQHFGAV
C2 TFAALLKQQQCNSDAVGLHPETLSMSTGEMPPQLQGLQNLQHIQQHFGAV
C3 TFAALLKQQQCNSDTGALHPEVLSISAGEVSHHLQGLQNLQHMQQQFGAV
C4 TFAALLKQQQCNPDAGGLHPEALSMSAGELSHHLQGLQNLQHMQQQFGAV
************.*: .****.**:*:**:. :*********:**:****
C1 AAAAGLPINPVDMLNIMQFHHLMSLNFMNLAPPLVFGANAAGNAVSGPSA
C2 AAASGLPINPVDMLNIMQFHHLMSLNFMNLAPPLVFGANAAGNAVSGSSA
C3 AAASGLSINPVDMLNIMQFHHLMSLNFMNLAPPLVFGANAAGNAVSPSSA
C4 AAASGLSINPVDMLNIMQFHHLMSLNFMNLAPPLVFGANATGNALSASSA
***:**.*********************************:***:* .**
C1 LNNSITTSTATSASGLGDT-HLTSGVSSIPVDSGKATAVPPQTQLNANAN
C2 QNNSITTATATSASGLGDT-HLTTGVSSLPVDSGKATAVPPQTQLNANAN
C3 QNNSIKTSTASSALVLGDTQILTSGVSSLPVDSVKAITVPAQTQLTVNAS
C4 QNNSITNSTATSALGLGDT-HLTSGVSSLPVDSVKATTVPAQTQLTVNAN
****..:**:** **** **:****:**** ** :**.****..**.
C1 SQQLASNQKRARTRITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMK
C2 SQQLASNQKRARTRITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMK
C3 SQQLASNQKRARTRITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMK
C4 SQQLASNQKRARTRITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMK
**************************************************
C1 VVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTPLND
C2 VVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTPLND
C3 VVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNIEEYERTGQAKVTPLND
C4 VVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTPLND
*********************************:****************
C1 TCSVAVTGPMTSSTISLPPSGNINLSSKENATSKVLAAGKANASGPVTFS
C2 TCSVAVTGPMTSSTISLPPSGSTNLSSKENATSKVLAAGKANASGPVTFT
C3 TSRVAVTAPITASTILLAPSGNANLISKESPTTKVLAAGKVIATGPATLS
C4 TCSVAVTAPMSASTISLPPSGNTNLISKENSTTKVLAAGKVLATGPVTFP
*. ****.*:::*** *.***. ** ***..*:*******. *:**.*:.
C1 ATVPVSTPLSRPESTNSSGNISDYIGNNIFFGQLGSKEQILPYSLDGQIK
C2 ATVPVSTPLSRPESTNSSGNISDYIGNNIFFGQLGSKDQILPYSLDGQIK
C3 TTVAVSMPVSRPESTTSSGNISDYLGNNIFFGQPGGKDQVLPCSVDGQIK
C4 ATVPVSTPVSRPESTNSSGNISDYLGNNIFFGQPGGKDQVLPYSVDGQIK
:**.** *:******.********:******** *.*:*:** *:*****
C1 SEPQDDMIGATDFAYQTKQHSSFSFLKQQQDLVDPPEQCLTNQNADTAQD
C2 SEPQDDVIGATDFAYQTKQHSNFSFLKQQQDLVDPPEQCLTNQNADTVQD
C3 SEPQDDMIGANDSAYQTKQHPTFSFLKHQQELTDPPEQCLTNQNADTVQD
C4 SEPQDDMIGANDSAYQTKPHSNFSFLRHQQDLADPPEQGLTNQNADTVQD
******:***.* ***** *..****::**:*.***** ********.**
C1 QSLLAGSSLASNCQSQQQINIFETKSESGSSDVLSRPPSPNSGAAGNVYG
C2 QSLLAGAALASNCQSQQQINIFETKSESGSSDVLSRPPSPNSGAAGNMYG
C3 QSLLAGSALASHCQNQQQINIFETKSESGSSDVMSRPPSPSSGAAGNIYG
C4 QSLLAGSALASHCQSQQQINIFETKSESGSSDVMSRPPSPSCGATGNIYG
******::***:**.******************:******..**:**:**
C1 SMNDLLNQQLENMGSNMGPPKKMQIVGKTFEKNVAPMVTSGSVSTQFESN
C2 SMNDLINQQLENMGSNMGPPKKMQIVGKTFEKNVAPMVTSGSVSTQFESN
C3 SMNDLINQQLENMGSNMGPPKNLQTVGKTFEKNAAPMPTSGSISAQFESN
C4 SMNDLINQQLENMGSNMGPPKNLQIIGKTFEKNVAPVATTGSASTQFESN
*****:***************::* :*******.**: *:** *:*****
C1 SSNSSSSSSSTSGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSK
C2 SSNSSSSSSSTSGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSK
C3 SSNSSSSSSSTSGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSK
C4 SSNSSSSSSSTSGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSK
**************************************************
C1 LLLLSPRVIVVWFQNARQKQRKIYENQPNNTLFENEETKKQNINYACKKC
C2 LLLLSPRVIVVWFQNARQKQRKIYENQPNNTLFENEETKKQNINYACKKC
C3 LLLLSPRVIVVWFQNARQKQRKIYENQPNNTLFENEETKKQNINYACKKC
C4 LLLLSPRVIVVWFQNARQKQRKIYENQPNNSLFENEETKKQNINYACKKC
******************************:*******************
C1 NLVFQRYYELIRHQKNHCFKEENNKKSAKAQIAAAQIAQNLSSEDSNSSM
C2 NLVFQRYYELIRHQKNHCFKEENNKKSAKAQIAAAQIAQNLSSEDSNSSM
C3 NLVFQRYYELIRHQKNHCFKEENNKKSAKAQIAAAQIAQNLSSEDSNSSM
C4 NLVFQRYYELIRHQKNHCFKEENNKKSAKAQIAAAQIAQNLSSEDSNSSI
*************************************************:
C1 DIHHVGICPPGSAVASHTLSTPGSAAPLPGQYTQHSFGALPSPQHLFAKS
C2 DIHHVGICPPGSAVVSQTLSTPGSAAPLSGQYTQHSFGALPSPQHLFAKS
C3 DIHHGGIGQPGTAVVSQTLSTPGSAASLPGQYAQHSFGALPSPQHLFAKS
C4 DIHHVGICPPGSAVVSQTLSTPGSAAPLPGQYAQHSFGALPSPQHLFAKS
**** ** **:**.*:*********.*.***:*****************
C1 SSLTDFSPSTTPTPPQRERSNSLDQIQRPPKFDCDKCELNFNQLEKLREH
C2 SSLTDFSPSTTPTPPQRERSNSLDHPQRPPKFDCDKCELKFNQSEKLREH
C3 SSLTDFSPSTTPTPPQRERSNSLDHPQRPPKFDCDKCDLKFNHLEKLREH
C4 SSLTDFSPSTTPTPPHRERSNSLDHPQRPPKFDCDKCDLKFSHLEKLREH
***************:********: ***********:*:*.: ******
C1 QLLHLMNPGNICSDVGQNSNPEANFGPFGSILQSLQQAAAQQQQQHHQQP
C2 QLLHLMNPGNIFSDASQNSNPEANFGPFGSILQSLQQAAAQQQQLQHQPP
C3 QLLHLMNQGNIFSDAGQNTNPEAHFGPFGSILQSLQQAAAQQQQPHHQPP
C4 QLLHLMNQGSIFSDAGQSSNPDANFGPFGSILQSLQQAAAQQKQPHHQPP
******* *.* **..*.:**:*:******************:* :** *
C1 PTKKRKYSDCSSNADEMQSLSELEASQKKHEYLYKYFMQNETSQEVKQQF
C2 PTKKRKYSDCSSNADEMQSLSELEASQKKHEFLYKYFMQNETSQEVKQQF
C3 PTKKRKYSDCSSNADEMQSLSEIEVSHKKHEFLYKYFMQNETSSELKQQF
C4 PTKKRKYSDCSSNADEMQSLSEHEVSQKKHEFLYKYFMQNETSPEVKKQF
********************** *.*:****:*********** *:*:**
C1 LMQQQQKKLEQGNECDFELDFLTNFYQQNELKKVSNYDFLLQYYRTHEEA
C2 LMQQQQKKLEQGNDCDFELDFLTNFYQQSELKKVSNYDFLLQYYRTHEEA
C3 LMQQQHKKVEQGNESEFELDFLTNFYQQSELKKVSNYDFLLSYYRTHEES
C4 LMQQQHKKLEQGNESDFELDFLTNFYQQSELKKVSSYDYLLQYYRTHEEA
*****:**:****:.:************.******.**:**.*******:
C1 KSSQQHTFSSSKKPTIEFLLQYYQLNESKKFFQLVASPQIIPDVPGYKPS
C2 KSSQQHLFSSSKKPTIEFLLQYYQLNESKKFFQLVASPQIIPDVPGYKPS
C3 KSSPQHIFSSSKKPTIEFLLQYYQLNESKKFFQLVASPQIIPDLPGYKPS
C4 KSSQQQIFSSSKKPTIEFLLQYYQLNESKKFFQLVASPQIIPDLPGYKPS
*** *: ************************************:******
C1 LRIPKSTSDEAPYIGETSLEQATELQREKQDEQLRIDRPSEENDLSMNKN
C2 SRMPKSTSDEAPYIGETSLEQATELQREKQDEQLRIDRPSEENELSMNKN
C3 SRMPKPASDEAPNIGETSLEQATKLQRE---EQLRIDRPSEENDLSITKN
C4 SGLQKPESDDGPNIGETSLEQATELQRE---EHLCVDRPSAKNDLSMNKN
: *. **:.* **********:**** *:* :**** :*:**:.**
C1 KVENINNN--NINVDQSNLTETNGGVPSVETKEECTQESSLIAMDDENKY
C2 KVENINNNNIGIHVGQSNLTATNG-IPSVETKDESTQESSLIAIDNENKY
C3 KVENINNNNISINEGQNDLTETNG-SPSGETKEEFPQESSLIETDNDNKY
C4 KVENINNNNISISVGQSDSTETNG-SPSGETKEEFPQEPSLIAIDDDNKY
******** .* .*.: * *** ** ***:* .**.*** *::***
C1 LCTRSKQKDDKEKSHYLHNLEDFLDATMIENNSQTLTFNDDEKACQKDEL
C2 LCARSKQKDDKEKSHYLHNLEDFLDATMIENNSQTLTFNDDEKACQKDEL
C3 LCTRSKQKNEKEKSQYLHNLEDFLDATMIENNSQTLTFNDDEKACQKDEP
C4 LCTTSKQNDEKEKSQYLHNLEDFLDATMIENNSQTLTFNDDEKACQKDEP
**: ***:::****:**********************************
C1 TQNSNAIEKRSSVSPVNVSSKQNKRLRTTILPEQLNFLYECYQSESNPSR
C2 TQNSNAIEKRSSVSPVNVSSKQNKRLRTTILPEQLNFLYECYQSESNPSR
C3 IQNSNEMEQRSSVSPVNVSSKQNKRLRTTILPEQLNFLYECYQSESNPSR
C4 IQNSNEMEKRSSVSPVNVSSKQNKRLRTTILPEQLNFLYECYQSESNPSR
**** :*:*****************************************
C1 KMLEEISKKVNLKKRVVQVWFQNSRAKDKKSRNQRHYAHISDDNSYDGSS
C2 KMLEEISKKVNLKKRVVQVWFQNSRAKDKKSRNQRHYAHISDDNSYDGSS
C3 KMLEEISKKVNLKKRVVQVWFQNSRAKDKKSRNQRHYAHISDDNSYDGSS
C4 KMLEEISKKVNLKKRVVQVWFQNSRAKDKKSRNQRHYAHISDDNSYDGSS
**************************************************
C1 GKEVYSDLRSNGIT-VDTDLETNLQDCQLCQVTQVNIRKHAFSVEHISKM
C2 GKEAYSDLRSNGIT-VDTDLETNLQDCQLCQVTQVNIRKHAFSVEHISKM
C3 GKEVVSDLRSNGVA-VETDHETNLQDCQLCQVTQVNIRKHAFSVEHICKM
C4 GKDVASDPKSNGVNGVDTDHETNLQDCQLCQVSQVNIRKHAFSVEHICKM
**:. ** :***: *:** ************:**************.**
C1 KKLLEQTTELYAQSNGSGSEDNDSDREKRFYNLSKAFLLQHVVTNATSHA
C2 KKLLEQTTELYAQSNGSGSEDNDSDREKRFYNLSKAFLFQHVVTNATSHS
C3 KKLLEQTTELYAQSNGSGSDDNDSDREKRFYNLSKAFLLQHVVSNATSHA
C4 KKLLDQTTELYAQSNGSGSDDNESDREKRFYNLSKAFLFQHVVSNATSHA
****:**************:**:***************:****:*****:
C1 IHTARQDSDVIAEGNCILNYDTNGGDSKSHVQHNLPNEVVSEDARKIAGN
C2 IHTARQDSDAIAEGNCMLNYDTNGGDSKSHVQHNLPNEVVSEDTRKIAGN
C3 IHTPRQDPDAIAEGNCVLTYETNGGDSKGHIHHNLPNEAVPEDAGKIASN
C4 IHAPRQDSDAIAEGNCMLTYDTNGGDSKSQIQHNLPNEVVPEDARKIASN
**:.***.*.******:*.*:*******.:::******.*.**: ***.*
C1 QELMQQLFNRNHITVIGGK----------------
C2 QELMQQLFNRNHITVIGGKo---------------
C3 QELMQQLFNRNHITVIGGKoooooooooooooooo
C4 QELMQQLFNRNHLTVIGGK----------------
************:******
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
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-exon_boundaries S [0]
-dump S [0] no
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INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
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-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alngins S [0] default
-proxy S [0] unset
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-overaln_param S [0]
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-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alngins S [0] default
-proxy S [0] unset
-email S [0]
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-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
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-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alngins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alngins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alngins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alngins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alngins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [37038]
Library Relaxation: Multi_proc [72]
gins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 4 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 3005 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 3005 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/443/zfh2-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.al 