--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Fri Dec 09 17:39:20 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/442/Zasp52-PU/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/442/Zasp52-PU/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/442/Zasp52-PU/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/442/Zasp52-PU/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -5362.58 -5377.75
2 -5362.14 -5374.71
--------------------------------------
TOTAL -5362.33 -5377.11
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/442/Zasp52-PU/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/442/Zasp52-PU/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/442/Zasp52-PU/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.356038 0.000801 0.299917 0.410483 0.354972 1374.70 1437.85 1.000
r(A<->C){all} 0.067931 0.000173 0.044124 0.095120 0.067195 1194.73 1227.31 1.003
r(A<->G){all} 0.195607 0.000682 0.144989 0.246098 0.194489 946.42 1040.45 1.003
r(A<->T){all} 0.119296 0.000567 0.072935 0.164814 0.118554 930.83 946.42 1.000
r(C<->G){all} 0.054016 0.000115 0.033717 0.074412 0.053436 901.31 1115.06 1.000
r(C<->T){all} 0.462781 0.001243 0.394551 0.531889 0.462037 1017.39 1036.54 1.000
r(G<->T){all} 0.100369 0.000398 0.064512 0.141129 0.099043 701.65 922.34 1.000
pi(A){all} 0.232640 0.000076 0.215745 0.249596 0.232534 1204.45 1212.72 1.000
pi(C){all} 0.337911 0.000092 0.318680 0.355760 0.338078 1001.20 1081.48 1.000
pi(G){all} 0.259486 0.000081 0.242706 0.277142 0.259453 1288.35 1302.50 1.000
pi(T){all} 0.169964 0.000056 0.155905 0.185472 0.169886 1165.63 1176.83 1.000
alpha{1,2} 0.121995 0.001360 0.038088 0.194316 0.123488 1045.57 1067.04 1.002
alpha{3} 2.556189 0.771206 1.074934 4.305208 2.418406 1142.60 1321.80 1.000
pinvar{all} 0.550517 0.002238 0.456497 0.635309 0.554876 1027.20 1067.85 1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -4643.603179
Model 2: PositiveSelection -4643.603194
Model 0: one-ratio -4711.996346
Model 3: discrete -4642.466903
Model 7: beta -4645.655167
Model 8: beta&w>1 -4642.48043
Model 0 vs 1 136.78633400000035
Model 2 vs 1 3.000000106112566E-5
Model 8 vs 7 6.349474000000555
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_Zasp52-PU)
Pr(w>1) post mean +- SE for w
141 S 0.552 1.030
231 L 0.840 1.451
233 Q 0.961* 1.628
235 Y 0.988* 1.667
236 N 0.996** 1.679
237 Q 0.996** 1.679
238 H 0.707 1.257
242 Y 0.824 1.427
340 T 0.914 1.559
373 H 0.984* 1.661
406 P 0.907 1.549
407 P 0.768 1.346
419 Q 0.519 0.982
441 P 0.904 1.544
442 T 0.945 1.604
486 P 0.987* 1.666
490 G 0.900 1.539
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_Zasp52-PU)
Pr(w>1) post mean +- SE for w
231 L 0.700 1.404 +- 0.773
233 Q 0.865 1.654 +- 0.634
235 Y 0.916 1.721 +- 0.578
236 N 0.945 1.757 +- 0.547
237 Q 0.961* 1.778 +- 0.535
238 H 0.527 1.119 +- 0.785
242 Y 0.678 1.369 +- 0.781
340 T 0.763 1.504 +- 0.692
373 H 0.898 1.699 +- 0.595
406 P 0.795 1.552 +- 0.716
407 P 0.603 1.246 +- 0.793
441 P 0.798 1.559 +- 0.722
442 T 0.830 1.605 +- 0.660
486 P 0.938 1.752 +- 0.566
490 G 0.791 1.548 +- 0.726
>C1
MAQPQLLQIKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQPQQQYNQHQQHYHQQQQ
QQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRIKDKN
LHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEGYVP
VPIKPNTKLSASTISSALNSHGYGGHSNGYSNGNSTPAPAPVNQGYARPF
GAAAPKSPVSYPPQQQQQSPRPAPGGQNPYATLPRSNVGQQAPGSASAPA
PVPSAAPTKATAPFKAPIVPKSVIANAVNAAAPPAPAVFPPDLSDLNLNS
NVDNSPGAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCNVQIR
GPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLA
PTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYC
EADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQ
SFYNKGGRPFCKNHARooooooooooooo
>C2
MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLRVEETGQSTPAFGNSHYEHDAPQQVQQQQQPQQQYNQHQQHYHQ
QQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRIK
DKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEG
YVPVPIKPNTKLSASTISSALNSHGYGGNSNGYSNGNSTPAPAPVNQGYA
RPFGAAAPKSPVSYPPQQQQQSPRPAPGGQNPYATLPRSNVGQQAPGSAN
APAPSAASTKATAPFKAPIVPKSVIANAVNAAAPPAPAVFPPDLSDLNLN
SNVDNSPGAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCNVQI
RGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYL
APTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKVFGNRPFFLEDGNAY
CEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEG
QSFYNKGGRPFCKNHARoooooooooooo
>C3
MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQQQQPQQQYNQHQQHYHQ
QQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRIK
DKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEG
YVPVPIKPNTKLSASTISSALNSHGYGGNSNGYSNGNSTPAPAPVNQGYA
RPFGAAAPKSPVSYPPQQQQQSPRPAPGGQNPYATLPRSNVGQQAPGSAN
APAPVPSAAPTKATAPFKAPIVPKSVIANAVNAAAPPAPAVFPPDLSDLN
LNSNVDNSPGAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCNV
QIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEK
YLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGN
AYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNL
EGQSFYNKGGRPFCKNHARoooooooooo
>C4
MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS
IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEETGQSTPAFGNSHYEHDAPQQQQQQYQQPQQQYNQHQQHYH
QQQQQQQQQQSSATRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVF
VRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPT
GTEGYVPVPIKPNTKLSASTISSALNSHGYGGNSNGYSNGNSTPAPAPVN
QGYARPFGAAAPKSPVSYPPQQQQQSPRPGGQNPYATLPRSNVGQQAPGS
ANAPAPAPAPSAAPIKATAPFKAPIVPKSVIANAVNAAAPPAPAVFPPDL
SDLNLNSNVDNSPGAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCN
SCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEY
CFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFL
EDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFC
KQNLEGQSFYNKGGRPFCKNHARoooooo
>C5
MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQQQQQQQPQQQYNQHQHQ
QHYHQQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVF
VRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPS
GTEGYVPVPIKPNTKLSASTISSALNSHGYGGSSNGYSNGNSAPAPAPVN
QGYARPFGAAAPKSPVSYPPQQQQQQSPRPAPGGQNPYATLPRSNVGQQA
PGSANAPAPAAAPAPLAAPTRATAPFKAPIVPKSVIANAVNAAAPPAPAV
FPPDLSDLNLNSNVDNSPGAGGKSAGAFGATSAPKRGRGILNKAAGPGVR
IPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGD
LYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGN
RPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCF
NCTFCKQNLEGQSFYNKGGRPFCKNHARo
>C6
MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS
IVNKQYNTPVGIYSEESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEESGQSTPAFGNSHYEHDAPRQQQQPQQQYNQQQQHYHQQQQ
QQQSSATRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRIKDKN
LHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPSGTEGYVP
VPIKPNTKLSASTISSALNSHGYGGNSNGYSNGNSAPAPAPVNQGYARPF
GAAAPKSPVSYPVQQQQQSPRPAPGGNNPYATLPRSNVGQQAPGSAPAPA
AVKATAPLKAPIAPKSVIANAFNAAAPPAPAPAVFPPDLGDLNLNSNVDD
SAGPGAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCNVQIRGP
FITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLAPT
CSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEA
DWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQSF
YNKGGRPFCKNHARooooooooooooooo
>C7
MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS
IVNKQYNTPVGIYSEESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEETGQSTPAFGNSHCEHDAPRQQQQQQPQQQQQYNQQQQHYH
QQQQQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFV
RIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHARQAAINNPPTG
TEGYVPVPIKPNTKLSASTISSALNTHGYGGNSNGYSNGNSAPAPAPVNQ
GYARPFGAAAPKSPVSYPVQQQQQQSPRPAPGGNNPYATLPRSNVGQQAP
GSANATAPAPVKAIAPLKAPIAPKSVIANAFNAAAPPAPAPAVFPPDLGD
LNLNSNVDDSVGAGAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCN
SCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEY
CFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFL
EDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFC
KQNLEGQSFYNKGGRPFCKNHARoooooo
>C8
MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEETGQSTPAFGNSHYEHDAPQQQQQQQQPQQQYNQHQQHHQQ
QQQLQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRI
KDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPSGTE
GYVPVPIKPNTKLSATTISSALNSHGYGGSNSNGYSNGNSAPAPAPVNQG
YARPFGAAAPKSPVSYPPQQQQQSPRPAPGGNINNNNPYATLPRSNVGQQ
APGSAPAPAVAQAPAPSAAPIKATAPFKAPIAPKSVIANAVNAAAPPAPA
VFPPDLSDLNLNSNLDDSPGAGNKGAGAFGATSAPKRGRGILNKAAGPGV
RIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKG
DLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFG
NRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQC
FNCTFCKQNLEGQSFYNKGGRPFCKNHAR
>C9
MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEETGQSTPAFGNSHYEHDAPQQQQQPQQQQYNQQQHQQQHYH
QQHHQQQQQQQLSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP
PSGTEGYVPVPIKPNTKLSASTISTALNSHGYGGSNSNGYSNGNSAPAPV
NQGYARPFGAAAPKSPVASYPPQQQQQSPRPAPGGNNNFNNNNAYATLPR
SNVGQQAPGSAPAPAPAPSAAPIKAKAPIAPKSVIANAVNAAAPPAPAVF
PPDLSDLNLNSNVDDSAGAGNKSAGAFGATSAPKRGRGILNKAAGPGVRI
PLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDL
YCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNR
PFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFN
CTFCKQNLEGQSFYNKGGRPFCKNHARoo
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=9, Len=756
C1 MAQPQLLQIKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
C2 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
C3 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
C4 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
C5 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
C6 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
C7 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
C8 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
C9 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
********:*****************************************
C1 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
C2 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
C3 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
C4 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
C5 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
C6 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
C7 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
C8 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
C9 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
**************************************************
C1 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
C2 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
C3 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
C4 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS
C5 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
C6 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS
C7 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS
C8 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
C9 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
****************************************:*********
C1 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
C2 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
C3 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
C4 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
C5 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
C6 IVNKQYNTPVGIYSEESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
C7 IVNKQYNTPVGIYSEESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
C8 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
C9 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
**************:***********************************
C1 EVLKFLREEETGQSTPAFGNSHYEHDAP-QQLQQ---PQQQYNQHQQHYH
C2 EVLKFLRVEETGQSTPAFGNSHYEHDAP-QQVQQQQQPQQQYNQHQQHYH
C3 EVLKFLREEETGQSTPAFGNSHYEHDAP-QQLQQQQQPQQQYNQHQQHYH
C4 EVLKFLREEETGQSTPAFGNSHYEHDAPQQQQQQYQQPQQQYNQHQQHYH
C5 EVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQQQQQQQPQQQYNQHQHQ
C6 EVLKFLREEESGQSTPAFGNSHYEHDAPRQQQQPQ----QQYNQQQQHYH
C7 EVLKFLREEETGQSTPAFGNSHCEHDAPRQQQQQQPQQQQQYNQQQQHYH
C8 EVLKFLREEETGQSTPAFGNSHYEHDAPQQQQQ--QQQPQQQYNQHQQHH
C9 EVLKFLREEETGQSTPAFGNSHYEHDAPQQQQQPQQQQYNQQQHQQQHYH
******* **:*********** ***** * * * ::::::
C1 QQ--QQQQQ---SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
C2 QQ--QQQQQ---SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
C3 QQ--QQQQQ---SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
C4 QQ--QQQQQQQQSSATRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
C5 QHYHQQQQQQ--SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
C6 QQ--QQQQQ---SSATRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
C7 QQ--QQQQQQQ-SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
C8 QQQQQLQQQ---SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
C9 QQHHQQQQQQQLSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG
*: * *** **:***********************************
C1 VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP
C2 VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP
C3 VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP
C4 VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP
C5 VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP
C6 VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP
C7 VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHARQAAINNP
C8 VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP
C9 VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP
******************************************:*******
C1 PTGTEGYVPVPIKPNTKLSASTISSALNSHGYGGH-SNGYSNGNSTPAPA
C2 PTGTEGYVPVPIKPNTKLSASTISSALNSHGYGGN-SNGYSNGNSTPAPA
C3 PTGTEGYVPVPIKPNTKLSASTISSALNSHGYGGN-SNGYSNGNSTPAPA
C4 PTGTEGYVPVPIKPNTKLSASTISSALNSHGYGGN-SNGYSNGNSTPAPA
C5 PSGTEGYVPVPIKPNTKLSASTISSALNSHGYGGS-SNGYSNGNSAPAPA
C6 PSGTEGYVPVPIKPNTKLSASTISSALNSHGYGGN-SNGYSNGNSAPAPA
C7 PTGTEGYVPVPIKPNTKLSASTISSALNTHGYGGN-SNGYSNGNSAPAPA
C8 PSGTEGYVPVPIKPNTKLSATTISSALNSHGYGGSNSNGYSNGNSAPAPA
C9 PSGTEGYVPVPIKPNTKLSASTISTALNSHGYGGSNSNGYSNGNS--APA
*:******************:***:***:***** ********* ***
C1 PVNQGYARPFGAAAPKSPVSYPPQQQQQ-SPRPAPGGQ------NPYATL
C2 PVNQGYARPFGAAAPKSPVSYPPQQQQQ-SPRPAPGGQ------NPYATL
C3 PVNQGYARPFGAAAPKSPVSYPPQQQQQ-SPRPAPGGQ------NPYATL
C4 PVNQGYARPFGAAAPKSPVSYPPQQQQQ-SPR--PGGQ------NPYATL
C5 PVNQGYARPFGAAAPKSPVSYPPQQQQQQSPRPAPGGQ------NPYATL
C6 PVNQGYARPFGAAAPKSPVSYPVQQQQQ-SPRPAPGGN------NPYATL
C7 PVNQGYARPFGAAAPKSPVSYPVQQQQQQSPRPAPGGN------NPYATL
C8 PVNQGYARPFGAAAPKSPVS-YPPQQQQQSPRPAPGGN--INNNNPYATL
C9 PVNQGYARPFGAAAPKSPVASYPPQQQQQSPRPAPGGNNNFNNNNAYATL
*******************: **** *** ***: *.****
C1 PRSNVGQQAPGSASAPAPV----PSAAPTKATAPFKAPIVPKSVIANAVN
C2 PRSNVGQQAPGSANAPA------PSAASTKATAPFKAPIVPKSVIANAVN
C3 PRSNVGQQAPGSANAPAPV----PSAAPTKATAPFKAPIVPKSVIANAVN
C4 PRSNVGQQAPGSANAPAPA--PAPSAAPIKATAPFKAPIVPKSVIANAVN
C5 PRSNVGQQAPGSANAPAPAAAPAPLAAPTRATAPFKAPIVPKSVIANAVN
C6 PRSNVGQQAPGSA--PAP--------AAVKATAPLKAPIAPKSVIANAFN
C7 PRSNVGQQAPGSANATAP--------APVKAIAPLKAPIAPKSVIANAFN
C8 PRSNVGQQAPGSAPAPAVAQAPAPSAAPIKATAPFKAPIAPKSVIANAVN
C9 PRSNVGQQAPGSAPAP----APAPSAAPIKA----KAPIAPKSVIANAVN
************* . *. :* ****.********.*
C1 AAAP--PAPAVFPPDLSDLNLNSNVDNSP--GAGGKSAGAFGATSAPKRG
C2 AAAP--PAPAVFPPDLSDLNLNSNVDNSP--GAGGKSAGAFGATSAPKRG
C3 AAAP--PAPAVFPPDLSDLNLNSNVDNSP--GAGGKSAGAFGATSAPKRG
C4 AAAP--PAPAVFPPDLSDLNLNSNVDNSP--GAGGKSAGAFGATSAPKRG
C5 AAAP--PAPAVFPPDLSDLNLNSNVDNSP--GAGGKSAGAFGATSAPKRG
C6 AAAPPAPAPAVFPPDLGDLNLNSNVDDSAGPGAGGKSAGAFGATSAPKRG
C7 AAAPPAPAPAVFPPDLGDLNLNSNVDDSVGAGAGGKSAGAFGATSAPKRG
C8 AAAP--PAPAVFPPDLSDLNLNSNLDDSP--GAGNKGAGAFGATSAPKRG
C9 AAAP--PAPAVFPPDLSDLNLNSNVDDSA--GAGNKSAGAFGATSAPKRG
**** **********.*******:*:* ***.*.*************
C1 RGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRR
C2 RGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRR
C3 RGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRR
C4 RGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRR
C5 RGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRR
C6 RGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRR
C7 RGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRR
C8 RGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRR
C9 RGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRR
**************************************************
C1 PLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPE
C2 PLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPE
C3 PLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPE
C4 PLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPE
C5 PLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPE
C6 PLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPE
C7 PLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPE
C8 PLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPE
C9 PLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPE
**************************************************
C1 CFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRW
C2 CFTCGQCGKVFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRW
C3 CFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRW
C4 CFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRW
C5 CFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRW
C6 CFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRW
C7 CFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRW
C8 CFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRW
C9 CFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRW
*********:****************************************
C1 VEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARooooooooo
C2 VEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARooooooooo
C3 VEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARooooooooo
C4 VEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARoooooo---
C5 VEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARo--------
C6 VEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARooooooooo
C7 VEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARoooooo---
C8 VEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHAR---------
C9 VEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARoo-------
*****************************************
C1 oooo--
C2 ooo---
C3 o-----
C4 ------
C5 ------
C6 oooooo
C7 ------
C8 ------
C9 ------
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log S [0]
-genepred_score S [0] nsd
-run_name S [0]
-mem_mode S [0] mem
-extend D [1] 1
-extend_mode S [0] very_fast_triplet
-max_n_pair D [0] 10
-seq_name_for_quadruplet S [0] all
-compact S [0] default
-clean S [0] no
-do_self FL [0] 0
-do_normalise D [0] 1000
-template_file S [0]
-setenv S [0] 0
-template_mode S [0]
-flip D [0] 0
-remove_template_file D [0] 0
-profile_template_file S [0]
-in S [0]
-seq S [0]
-aln S [0]
-method_limits S [0]
-method S [0]
-lib S [0]
-profile S [0]
-profile1 S [0]
-profile2 S [0]
-pdb S [0]
-relax_lib D [0] 1
-filter_lib D [0] 0
-shrink_lib D [0] 0
-out_lib W_F [0] no
-out_lib_mode S [0] primary
-lib_only D [0] 0
-outseqweight W_F [0] no
-dpa FL [0] 0
-seq_source S [0] ANY
-cosmetic_penalty D [0] 0
-gapopen D [0] 0
-gapext D [0] 0
-fgapopen D [0] 0
-fgapext D [0] 0
-nomatch D [0] 0
-newtree W_F [0] default
-tree W_F [0] NO
-usetree R_F [0]
-tree_mode S [0] nj
-distance_matrix_mode S [0] ktup
-distance_matrix_sim_mode S [0] idmat_sim1
-quicktree FL [0] 0
-outfile W_F [0] default
-maximise FL [1] 1
-output S [1] score_ascii html score_ascii
-len D [0] 0
-infile R_F [1] /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix S [0] default
-tg_mode D [0] 1
-profile_mode S [0] cw_profile_profile
-profile_comparison S [0] profile
-dp_mode S [0] linked_pair_wise
-ktuple D [0] 1
-ndiag D [0] 0
-diag_threshold D [0] 0
-diag_mode D [0] 0
-sim_matrix S [0] vasiliky
-transform S [0]
-extend_seq FL [0] 0
-outorder S [0] input
-inorder S [0] aligned
-seqnos S [0] off
-case S [0] keep
-cpu D [0] 0
-maxnseq D [0] 1000
-maxlen D [0] -1
-sample_dp D [0] 0
-weight S [0] default
-seq_weight S [0] no
-align FL [1] 1
-mocca FL [0] 0
-domain FL [0] 0
-start D [0] 0
-len D [0] 0
-scale D [0] 0
-mocca_interactive FL [0] 0
-method_evaluate_mode S [0] default
-evaluate_mode S [1] t_coffee_fast
-get_type FL [0] 0
-clean_aln D [0] 0
-clean_threshold D [1] 1
-clean_iteration D [1] 1
-clean_evaluate_mode S [0] t_coffee_fast
-extend_matrix FL [0] 0
-prot_min_sim D [40] 40
-prot_max_sim D [90] 90
-prot_min_cov D [40] 40
-pdb_type S [0] d
-pdb_min_sim D [35] 35
-pdb_max_sim D [100] 100
-pdb_min_cov D [50] 50
-pdb_blast_server W_F [0] EBI
-blast W_F [0]
-blast_server W_F [0] EBI
-pdb_db W_F [0] pdb
-protein_db W_F [0] uniprot
-method_log W_F [0] no
-struc_to_use S [0]
-cache W_F [0] use
-align_pdb_param_file W_F [0] no
-align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble
-external_aligner S [0] NO
-msa_mode S [0] tree
-master S [0] no
-blast_nseq D [0] 0
-lalign_n_top D [0] 10
-iterate D [1] 0
-trim D [0] 0
-split D [0] 0
-trimfile S [0] default
-split D [0] 0
-split_nseq_thres D [0] 0
-split_score_thres D [0] 0
-check_pdb_status D [0] 0
-clean_seq_name D [0] 0
-seq_to_keep S [0]
-dpa_master_aln S [0]
-dpa_maxnseq D [0] 0
-dpa_min_score1 D [0]
-dpa_min_score2 D [0]
-dpa_keep_tmpfile FL [0] 0
-dpa_debug D [0] 0
-multi_core S [0] templates_jobs_relax_msa_evaluate
-n_core D [0] 0
-max_n_proc D [0] 0
-lib_list S [0]
-prune_lib_mode S [0] 5
-tip S [0] none
-rna_lib S [0]
-no_warning D [0] 0
-run_local_script D [0] 0
-plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
lugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 729 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 729 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PU/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overa 