--- EXPERIMENT NOTES --- EXPERIMENT PROPERTIES #Fri Dec 09 16:53:19 WET 2016 codeml.models=0 1 2 3 7 8 mrbayes.mpich= mrbayes.ngen=1000000 tcoffee.alignMethod=CLUSTALW2 tcoffee.params= tcoffee.maxSeqs=0 codeml.bin=codeml mrbayes.tburnin=2500 codeml.dir= input.sequences= mrbayes.pburnin=2500 mrbayes.bin=mb_adops tcoffee.bin=t_coffee_ADOPS mrbayes.dir=/usr/bin/ tcoffee.dir= tcoffee.minScore=3 input.fasta=/opt/ADOPS/442/Zasp52-PS/input.fasta input.names= mrbayes.params= codeml.params= --- PSRF SUMMARY Estimated marginal likelihoods for runs sampled in files "/opt/ADOPS/442/Zasp52-PS/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/442/Zasp52-PS/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": (Use the harmonic mean for Bayes factor comparisons of models) (Values are saved to the file /opt/ADOPS/442/Zasp52-PS/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat) Run Arithmetic mean Harmonic mean -------------------------------------- 1 -5894.27 -5908.92 2 -5894.00 -5909.32 -------------------------------------- TOTAL -5894.13 -5909.14 -------------------------------------- Model parameter summaries over the runs sampled in files "/opt/ADOPS/442/Zasp52-PS/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/442/Zasp52-PS/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": Summaries are based on a total of 3002 samples from 2 runs. Each run produced 2001 samples of which 1501 samples were included. Parameter summaries saved to file "/opt/ADOPS/442/Zasp52-PS/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat". 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+ ------------------------------------------------------------------------------------------------------ TL{all} 0.337120 0.000698 0.288872 0.391120 0.336040 1401.20 1419.32 1.000 r(A<->C){all} 0.054938 0.000127 0.033617 0.076684 0.054361 1218.07 1228.13 1.000 r(A<->G){all} 0.208159 0.000621 0.159461 0.255958 0.207535 739.92 874.46 1.000 r(A<->T){all} 0.122986 0.000462 0.082417 0.164252 0.121508 863.91 915.46 1.001 r(C<->G){all} 0.055716 0.000119 0.035824 0.078084 0.055062 871.39 1013.33 1.000 r(C<->T){all} 0.456015 0.001068 0.393937 0.519521 0.456872 913.59 981.55 1.000 r(G<->T){all} 0.102187 0.000397 0.066634 0.141893 0.101294 983.22 1026.71 1.000 pi(A){all} 0.248442 0.000072 0.232675 0.266109 0.248269 1157.37 1169.87 1.000 pi(C){all} 0.333492 0.000085 0.316228 0.351799 0.333555 1302.05 1307.64 1.000 pi(G){all} 0.249003 0.000070 0.233331 0.266297 0.248857 1136.34 1223.01 1.000 pi(T){all} 0.169062 0.000050 0.155610 0.183453 0.168832 1210.92 1238.14 1.000 alpha{1,2} 0.136252 0.001091 0.071642 0.202108 0.136573 1162.90 1247.21 1.001 alpha{3} 2.833527 0.854385 1.146104 4.504228 2.711226 1254.39 1355.52 1.000 pinvar{all} 0.535474 0.002201 0.439914 0.623721 0.539412 974.54 1085.48 1.001 ------------------------------------------------------------------------------------------------------ * Convergence diagnostic (ESS = Estimated Sample Size); min and avg values correspond to minimal and average ESS among runs. ESS value below 100 may indicate that the parameter is undersampled. + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge. Setting sumt conformat to Simple --- CODEML SUMMARY Model 1: NearlyNeutral -4947.461527 Model 2: PositiveSelection -4947.461527 Model 0: one-ratio -5000.539837 Model 3: discrete -4947.453882 Model 7: beta -4948.380097 Model 8: beta&w>1 -4947.46783 Model 0 vs 1 106.15661999999975 Model 2 vs 1 0.0 Model 8 vs 7 1.824534000001222
>C1 MAQPQLLQIKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS EVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQPQQQYNQHQQHYHQQQQ QQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRIKDKN LHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEGYVP VPIKPNTKLSASTISSALNSHGYGGHSNGYSNGNSTPAPAPVNQGYARPF GAAAPKSPVSYPPQQQQQSPRPAPGGQNPYATLPRSNVGQQGRNVRYQQQ QQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSSNSYNNN NYSNYNNNNVYRAPGSASAPAPVPSAAPTKATAPFKAPIVPKSVIANAVN AAAPPAPAVFPPDLSDLNLNSNVDNSPGAGGKSAGAFGATSAPKRGRGIL NKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQD IGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTC GQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEAL NHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARoooooo >C2 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS EVLKFLRVEETGQSTPAFGNSHYEHDAPQQVQQQQQPQQQYNQHQQHYHQ QQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRIK DKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEG YVPVPIKPNTKLSASTISSALNSHGYGGNSNGYSNGNSTPAPAPVNQGYA RPFGAAAPKSPVSYPPQQQQQSPRPAPGGQNPYATLPRSNVGQQGRNVRY QQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSSNSYNN NNYSTYNNNNVYRAPGSANAPAPSAASTKATAPFKAPIVPKSVIANAVNA AAPPAPAVFPPDLSDLNLNSNVDNSPGAGGKSAGAFGATSAPKRGRGILN KAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDI GFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCG QCGKVFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALN HNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARooooooo >C3 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS EVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQQQQPQQQYNQHQQHYHQ QQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRIK DKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPTGTEG YVPVPIKPNTKLSASTISSALNSHGYGGNSNGYSNGNSTPAPAPVNQGYA RPFGAAAPKSPVSYPPQQQQQSPRPAPGGQNPYATLPRSNVGQQGRNVRY QQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSSNSYNN NNYSTYNNNNVYRAPGSANAPAPVPSAAPTKATAPFKAPIVPKSVIANAV NAAAPPAPAVFPPDLSDLNLNSNVDNSPGAGGKSAGAFGATSAPKRGRGI LNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQ DIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFT CGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEA LNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARooooo >C4 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS EVLKFLREEETGQSTPAFGNSHYEHDAPQQQQQQYQQPQQQYNQHQQHYH QQQQQQQQQQSSATRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVF VRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPT GTEGYVPVPIKPNTKLSASTISSALNSHGYGGNSNGYSNGNSTPAPAPVN QGYARPFGAAAPKSPVSYPPQQQQQSPRPGGQNPYATLPRSNVGQQGRNV RYQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSNSNTNNN NYSTYNNNNNNNVYRAPGSANAPAPAPAPSAAPIKATAPFKAPIVPKSVI ANAVNAAAPPAPAVFPPDLSDLNLNSNVDNSPGAGGKSAGAFGATSAPKR GRGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCR RPLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHP ECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDR WVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARo >C5 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS EVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQQQQQQQPQQQYNQHQHQ QHYHQQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVF VRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPS GTEGYVPVPIKPNTKLSASTISSALNSHGYGGSSNGYSNGNSAPAPAPVN QGYARPFGAAAPKSPVSYPPQQQQQQSPRPAPGGQNPYATLPRSNVGQQG RNVRYQQQQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSNNHNNNNN YGSYNNNNVYRAPGSANAPAPAAAPAPLAAPTRATAPFKAPIVPKSVIAN AVNAAAPPAPAVFPPDLSDLNLNSNVDNSPGAGGKSAGAFGATSAPKRGR GILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRP LQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPEC FTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWV EALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARooo >C6 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS IVNKQYNTPVGIYSEESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS EVLKFLREEESGQSTPAFGNSHYEHDAPRQQQQPQQQYNQQQQHYHQQQQ QQQSSATRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRIKDKN LHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPSGTEGYVP VPIKPNTKLSASTISSALNSHGYGGNSNGYSNGNSAPAPAPVNQGYARPF GAAAPKSPVSYPVQQQQQSPRPAPGGNNPYATLPRSNVGQQGRNVRYQQQ QQQYNNQQKQQYRNSYPMGSNYSTPSQSPYIITPTNNNYGSSNTNNNYST YNNNNVYRAPGSAPAPAAVKATAPLKAPIAPKSVIANAFNAAAPPAPAPA VFPPDLGDLNLNSNVDDSAGPGAGGKSAGAFGATSAPKRGRGILNKAAGP GVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEE KGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKI FGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHS QCFNCTFCKQNLEGQSFYNKGGRPFCKNHARoooooooooooo >C7 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS IVNKQYNTPVGIYSEESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS EVLKFLREEETGQSTPAFGNSHCEHDAPRQQQQQQPQQQQQYNQQQQHYH QQQQQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFV RIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHARQAAINNPPTG TEGYVPVPIKPNTKLSASTISSALNTHGYGGNSNGYSNGNSAPAPAPVNQ GYARPFGAAAPKSPVSYPVQQQQQQSPRPAPGGNNPYATLPRSNVGQQGR NVRYQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYIITPTNNYSSSNT NNTNYSTFNNNNVYRAPGSANATAPAPVKAIAPLKAPIAPKSVIANAFNA AAPPAPAPAVFPPDLGDLNLNSNVDDSVGAGAGGKSAGAFGATSAPKRGR GILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRP LQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPEC FTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWV EALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARooo >C8 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS EVLKFLREEETGQSTPAFGNSHYEHDAPQQQQQQQQPQQQYNQHQQHHQQ QQQLQQQSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITGVFVRI KDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPPSGTE GYVPVPIKPNTKLSATTISSALNSHGYGGSNSNGYSNGNSAPAPAPVNQG YARPFGAAAPKSPVSYPPQQQQQSPRPAPGGNINNNNPYATLPRSNVGQQ GRNVRYQQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYIISTTNNNNY NNNYSNYNNNNFNRAPGSAPAPAVAQAPAPSAAPIKATAPFKAPIAPKSV IANAVNAAAPPAPAVFPPDLSDLNLNSNLDDSPGAGNKGAGAFGATSAPK RGRGILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNC RRPLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFH PECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGD RWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHAR >C9 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS EVLKFLREEETGQSTPAFGNSHYEHDAPQQQQQPQQQQYNQQQHQQQHYH QQHHQQQQQQQLSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECERLITG VFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNP PSGTEGYVPVPIKPNTKLSASTISTALNSHGYGGSNSNGYSNGNSAPAPV NQGYARPFGAAAPKSPVASYPPQQQQQSPRPAPGGNNNFNNNNAYATLPR SNVGQQGRNVRYQQQQQHQQYNNQQKQQYRNSYPMGSNYSTPSQSPYIIS STTNNNNYSSYNNNNVYRAPGSAPAPAPAPSAAPIKAKAPIAPKSVIANA VNAAAPPAPAVFPPDLSDLNLNSNVDDSAGAGNKSAGAFGATSAPKRGRG ILNKAAGPGVRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPL QDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECF TCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVE ALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHARoooo CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=9, Len=832 C1 MAQPQLLQIKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ C2 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ C3 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ C4 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ C5 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ C6 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ C7 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ C8 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ C9 MAQPQLLQVKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ ********:***************************************** C1 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT C2 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT C3 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT C4 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT C5 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT C6 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT C7 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT C8 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT C9 PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT ************************************************** C1 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS C2 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS C3 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS C4 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS C5 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS C6 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS C7 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFANGGDGGVKS C8 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS C9 GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS ****************************************:********* C1 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS C2 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS C3 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS C4 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS C5 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS C6 IVNKQYNTPVGIYSEESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS C7 IVNKQYNTPVGIYSEESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS C8 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS C9 IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS **************:*********************************** C1 EVLKFLREEETGQSTPAFGNSHYEHDAP---QQLQQ---PQQQYN--QHQ C2 EVLKFLRVEETGQSTPAFGNSHYEHDAP---QQVQQQQQPQQQYN--QHQ C3 EVLKFLREEETGQSTPAFGNSHYEHDAP---QQLQQQQQPQQQYN--QHQ C4 EVLKFLREEETGQSTPAFGNSHYEHDAPQ--QQQQQYQQPQQQYN--QHQ C5 EVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQQQQQQQPQQQYNQHQHQ C6 EVLKFLREEESGQSTPAFGNSHYEHDAPR--QQQQPQ----QQYN--QQQ C7 EVLKFLREEETGQSTPAFGNSHCEHDAPR--QQQQQQPQQQQQYN--QQQ C8 EVLKFLREEETGQSTPAFGNSHYEHDAPQ--QQQQ--QQQPQQQY--NQH C9 EVLKFLREEETGQSTPAFGNSHYEHDAPQ--QQQQPQQQQYNQQQ--HQQ ******* **:*********** ***** ** * :* ::: C1 QHYHQQ--QQQQQ---SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECER C2 QHYHQQ--QQQQQ---SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECER C3 QHYHQQ--QQQQQ---SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECER C4 QHYHQQ--QQQQQQQQSSATRHVSAPVNSPKPPSTGGLPTGQNICTECER C5 QHYHQQ--QQQQS----STTRHVSAPVNSPKPPSTGGLPTGQNICTECER C6 QHYHQQ--QQQQQ---SSATRHVSAPVNSPKPPSTGGLPTGQNICTECER C7 QHYHQQ--QQQQQQQ-SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECER C8 QQHHQQQQQLQQQ---SSTTRHVSAPVNSPKPPSTGGLPTGQNICTECER C9 QHYHQQHHQQQQQQQLSSTTRHVSAPVNSPKPPSTGGLPTGQNICTECER *::*** * **. *:******************************* C1 LITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAA C2 LITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAA C3 LITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAA C4 LITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAA C5 LITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAA C6 LITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAA C7 LITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHARQAA C8 LITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAA C9 LITGVFVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAA **********************************************:*** C1 INNPPTGTEGYVPVPIKPNTKLSASTISSALNSHGYGG-HSNGYSNGNST C2 INNPPTGTEGYVPVPIKPNTKLSASTISSALNSHGYGG-NSNGYSNGNST C3 INNPPTGTEGYVPVPIKPNTKLSASTISSALNSHGYGG-NSNGYSNGNST C4 INNPPTGTEGYVPVPIKPNTKLSASTISSALNSHGYGG-NSNGYSNGNST C5 INNPPSGTEGYVPVPIKPNTKLSASTISSALNSHGYGG-SSNGYSNGNSA C6 INNPPSGTEGYVPVPIKPNTKLSASTISSALNSHGYGG-NSNGYSNGNSA C7 INNPPTGTEGYVPVPIKPNTKLSASTISSALNTHGYGG-NSNGYSNGNSA C8 INNPPSGTEGYVPVPIKPNTKLSATTISSALNSHGYGGSNSNGYSNGNSA C9 INNPPSGTEGYVPVPIKPNTKLSASTISTALNSHGYGGSNSNGYSNGNS- *****:******************:***:***:***** ********* C1 PAPAPVNQGYARPFGAAAPKSPVS-YPPQQQQQ-SPRPAPGGQN------ C2 PAPAPVNQGYARPFGAAAPKSPVS-YPPQQQQQ-SPRPAPGGQN------ C3 PAPAPVNQGYARPFGAAAPKSPVS-YPPQQQQQ-SPRPAPGGQN------ C4 PAPAPVNQGYARPFGAAAPKSPVS-YPPQQQQQ-SPR--PGGQN------ C5 PAPAPVNQGYARPFGAAAPKSPVS-YPPQQQQQQSPRPAPGGQN------ C6 PAPAPVNQGYARPFGAAAPKSPVS-YPVQQQQQ-SPRPAPGGNN------ C7 PAPAPVNQGYARPFGAAAPKSPVS-YPVQQQQQQSPRPAPGGNN------ C8 PAPAPVNQGYARPFGAAAPKSPVS-YPPQQQQQ-SPRPAPGGN--INNNN C9 -APAPVNQGYARPFGAAAPKSPVASYPPQQQQQ-SPRPAPGGNNNFNNNN **********************: ** ***** *** ***: C1 PYATLPRSNVGQQGRNVRYQQQQQQQQQYNNQQKQQYRNSYPMGSNYSTP C2 PYATLPRSNVGQQGRNVRYQQQQQQQ--YNNQQKQQYRNSYPMGSNYSTP C3 PYATLPRSNVGQQGRNVRYQQQQQQQ--YNNQQKQQYRNSYPMGSNYSTP C4 PYATLPRSNVGQQGRNVRYQQQ--QQ--YNNQQKQQYRNSYPMGSNYSTP C5 PYATLPRSNVGQQGRNVRYQQQ---------QQKQQYRNSYPMGSNYSTP C6 PYATLPRSNVGQQGRNVRYQQQQQQ---YNNQQKQQYRNSYPMGSNYSTP C7 PYATLPRSNVGQQGRNVRYQQQQQQ---YNNQQKQQYRNSYPMGSNYSTP C8 PYATLPRSNVGQQGRNVRYQQQQQ--QQYNNQQKQQYRNSYPMGSNYSTP C9 AYATLPRSNVGQQGRNVRYQQQQQH-QQYNNQQKQQYRNSYPMGSNYSTP .********************* ******************* C1 SQSPYITSNTNNYSSSNSYNNNNYSNYNNNN---VYRAPGSASAPAPV-- C2 SQSPYITSNTNNYSSSNSYNNNNYSTYNNNN---VYRAPGSANAPA---- C3 SQSPYITSNTNNYSSSNSYNNNNYSTYNNNN---VYRAPGSANAPAPV-- C4 SQSPYITSNTNNYSNSN-TNNNNYSTYNNNNNNNVYRAPGSANAPAPAPA C5 SQSPYITSNTNNYSSNNHNNNNNYGSYNNNN---VYRAPGSANAPAPAAA C6 SQSPYIITPTNNNYGSSNTNN-NYSTYNNNN---VYRAPGSA--PAP--- C7 SQSPYIITPTNN-YSSSNTNNTNYSTFNNNN---VYRAPGSANATAP--- C8 SQSPYIIS-----TTNNNNYNNNYSNYNNNN---FNRAPGSAPAPAVAQA C9 SQSPYIIS-----STTNN---NNYSSYNNNN---VYRAPGSAPAP----A ****** : .. **..:**** . ****** . C1 --PSAAPTKATAPFKAPIVPKSVIANAVNAAAP--PAPAVFPPDLSDLNL C2 --PSAASTKATAPFKAPIVPKSVIANAVNAAAP--PAPAVFPPDLSDLNL C3 --PSAAPTKATAPFKAPIVPKSVIANAVNAAAP--PAPAVFPPDLSDLNL C4 --PSAAPIKATAPFKAPIVPKSVIANAVNAAAP--PAPAVFPPDLSDLNL C5 PAPLAAPTRATAPFKAPIVPKSVIANAVNAAAP--PAPAVFPPDLSDLNL C6 -----AAVKATAPLKAPIAPKSVIANAFNAAAPPAPAPAVFPPDLGDLNL C7 -----APVKAIAPLKAPIAPKSVIANAFNAAAPPAPAPAVFPPDLGDLNL C8 PAPSAAPIKATAPFKAPIAPKSVIANAVNAAAP--PAPAVFPPDLSDLNL C9 PAPSAAPIKA----KAPIAPKSVIANAVNAAAP--PAPAVFPPDLSDLNL *. :* ****.********.***** **********.**** C1 NSNVDNSP--GAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCN C2 NSNVDNSP--GAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCN C3 NSNVDNSP--GAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCN C4 NSNVDNSP--GAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCN C5 NSNVDNSP--GAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCN C6 NSNVDDSAGPGAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCN C7 NSNVDDSVGAGAGGKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCN C8 NSNLDDSP--GAGNKGAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCN C9 NSNVDDSA--GAGNKSAGAFGATSAPKRGRGILNKAAGPGVRIPLCNSCN ***:*:* ***.*.********************************** C1 VQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFE C2 VQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFE C3 VQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFE C4 VQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFE C5 VQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFE C6 VQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFE C7 VQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFE C8 VQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFE C9 VQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFE ************************************************** C1 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDG C2 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKVFGNRPFFLEDG C3 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDG C4 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDG C5 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDG C6 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDG C7 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDG C8 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDG C9 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDG **************************************:*********** C1 NAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQN C2 NAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQN C3 NAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQN C4 NAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQN C5 NAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQN C6 NAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQN C7 NAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQN C8 NAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQN C9 NAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQN ************************************************** C1 LEGQSFYNKGGRPFCKNHARoooooo------ C2 LEGQSFYNKGGRPFCKNHARooooooo----- C3 LEGQSFYNKGGRPFCKNHARooooo------- C4 LEGQSFYNKGGRPFCKNHARo----------- C5 LEGQSFYNKGGRPFCKNHARooo--------- C6 LEGQSFYNKGGRPFCKNHARoooooooooooo C7 LEGQSFYNKGGRPFCKNHARooo--------- C8 LEGQSFYNKGGRPFCKNHAR------------ C9 LEGQSFYNKGGRPFCKNHARoooo-------- ******************** PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427) -full_log S [0] -genepred_score S [0] nsd -run_name S [0] -mem_mode S [0] mem -extend D [1] 1 -extend_mode S [0] very_fast_triplet -max_n_pair D [0] 10 -seq_name_for_quadruplet S [0] all -compact S [0] default -clean S [0] no -do_self FL [0] 0 -do_normalise D [0] 1000 -template_file S [0] -setenv S [0] 0 -template_mode S [0] -flip D [0] 0 -remove_template_file D [0] 0 -profile_template_file S [0] -in S [0] -seq S [0] -aln S [0] -method_limits S [0] -method S [0] -lib S [0] -profile S [0] -profile1 S [0] -profile2 S [0] -pdb S [0] -relax_lib D [0] 1 -filter_lib D [0] 0 -shrink_lib D [0] 0 -out_lib W_F [0] no -out_lib_mode S [0] primary -lib_only D [0] 0 -outseqweight W_F [0] no -dpa FL [0] 0 -seq_source S [0] ANY -cosmetic_penalty D [0] 0 -gapopen D [0] 0 -gapext D [0] 0 -fgapopen D [0] 0 -fgapext D [0] 0 -nomatch D [0] 0 -newtree W_F [0] default -tree W_F [0] NO -usetree R_F [0] -tree_mode S [0] nj -distance_matrix_mode S [0] ktup -distance_matrix_sim_mode S [0] idmat_sim1 -quicktree FL [0] 0 -outfile W_F [0] default -maximise FL [1] 1 -output S [1] score_ascii html score_ascii -len D [0] 0 -infile R_F [1] /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln -matrix S [0] default -tg_mode D [0] 1 -profile_mode S [0] cw_profile_profile -profile_comparison S [0] profile -dp_mode S [0] linked_pair_wise -ktuple D [0] 1 -ndiag D [0] 0 -diag_threshold D [0] 0 -diag_mode D [0] 0 -sim_matrix S [0] vasiliky -transform S [0] -extend_seq FL [0] 0 -outorder S [0] input -inorder S [0] aligned -seqnos S [0] off -case S [0] keep -cpu D [0] 0 -maxnseq D [0] 1000 -maxlen D [0] -1 -sample_dp D [0] 0 -weight S [0] default -seq_weight S [0] no -align FL [1] 1 -mocca FL [0] 0 -domain FL [0] 0 -start D [0] 0 -len D [0] 0 -scale D [0] 0 -mocca_interactive FL [0] 0 -method_evaluate_mode S [0] default -evaluate_mode S [1] t_coffee_fast -get_type FL [0] 0 -clean_aln D [0] 0 -clean_threshold D [1] 1 -clean_iteration D [1] 1 -clean_evaluate_mode S [0] t_coffee_fast -extend_matrix FL [0] 0 -prot_min_sim D [40] 40 -prot_max_sim D [90] 90 -prot_min_cov D [40] 40 -pdb_type S [0] d -pdb_min_sim D [35] 35 -pdb_max_sim D [100] 100 -pdb_min_cov D [50] 50 -pdb_blast_server W_F [0] EBI -blast W_F [0] -blast_server W_F [0] EBI -pdb_db W_F [0] pdb -protein_db W_F [0] uniprot -method_log W_F [0] no -struc_to_use S [0] -cache W_F [0] use -align_pdb_param_file W_F [0] no -align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble -external_aligner S [0] NO -msa_mode S [0] tree -master S [0] no -blast_nseq D [0] 0 -lalign_n_top D [0] 10 -iterate D [1] 0 -trim D [0] 0 -split D [0] 0 -trimfile S [0] default -split D [0] 0 -split_nseq_thres D [0] 0 -split_score_thres D [0] 0 -check_pdb_status D [0] 0 -clean_seq_name D [0] 0 -seq_to_keep S [0] -dpa_master_aln S [0] -dpa_maxnseq D [0] 0 -dpa_min_score1 D [0] -dpa_min_score2 D [0] -dpa_keep_tmpfile FL [0] 0 -dpa_debug D [0] 0 -multi_core S [0] templates_jobs_relax_msa_evaluate -n_core D [0] 0 -max_n_proc D [0] 0 -lib_list S [0] -prune_lib_mode S [0] 5 -tip S [0] none -rna_lib S [0] -no_warning D [0] 0 -run_local_script D [0] 0 -plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: lugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 793 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnlugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 9 SEQUENCES [PROTEIN] Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 793 type PROTEIN Struct Unchecked Input File /opt/ADOPS/442/Zasp52-PS/batch/allfiles/tcoffee/input.fasta.prot.