--- EXPERIMENT NOTES




 --- EXPERIMENT PROPERTIES

#Fri Nov 25 13:37:07 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/346/PGRP-LB-PC/input.fasta
input.names=
mrbayes.params=
codeml.params=



 --- PSRF SUMMARY

      Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)

(Values are saved to the file /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)

Run   Arithmetic mean   Harmonic mean
--------------------------------------
1      -2051.99         -2064.76
2      -2051.93         -2065.32
--------------------------------------
TOTAL    -2051.96         -2065.08
--------------------------------------


Model parameter summaries over the runs sampled in files
"/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".

95% HPD Interval
--------------------
Parameter         Mean      Variance     Lower       Upper       Median    min ESS*  avg ESS    PSRF+
------------------------------------------------------------------------------------------------------
TL{all}         0.624931    0.007924    0.468754    0.811508    0.617244   1277.15   1389.08    1.000
r(A<->C){all}   0.173457    0.001248    0.108964    0.242416    0.171935    896.39    949.45    1.000
r(A<->G){all}   0.216278    0.001805    0.135484    0.301119    0.213160    926.45   1086.97    1.000
r(A<->T){all}   0.115345    0.001702    0.038856    0.195234    0.112325    724.99    766.11    1.000
r(C<->G){all}   0.086550    0.000461    0.044450    0.127274    0.085082   1061.47   1096.41    1.000
r(C<->T){all}   0.290430    0.002433    0.195889    0.382359    0.287095    863.67    881.71    1.000
r(G<->T){all}   0.117941    0.001145    0.055895    0.185885    0.115437    858.90    947.12    1.001
pi(A){all}      0.210129    0.000211    0.183291    0.239217    0.209791    948.26   1077.01    1.000
pi(C){all}      0.335873    0.000261    0.306860    0.369988    0.335670   1299.01   1327.29    1.000
pi(G){all}      0.278728    0.000237    0.248555    0.307870    0.278633   1126.76   1196.18    1.000
pi(T){all}      0.175270    0.000179    0.148824    0.200635    0.175173    991.34    994.98    1.000
alpha{1,2}      0.178047    0.002400    0.089423    0.287474    0.175109   1132.01   1133.32    1.000
alpha{3}        2.072347    0.611477    0.764466    3.656266    1.947823   1258.38   1367.97    1.000
pinvar{all}     0.355198    0.008805    0.154051    0.517182    0.368988   1004.61   1067.87    1.001
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.


Setting sumt conformat to Simple



 --- CODEML SUMMARY

Model 1: NearlyNeutral	-1787.073819
Model 2: PositiveSelection	-1786.979894
Model 0: one-ratio	-1805.437461
Model 3: discrete	-1786.452812
Model 7: beta	-1789.169534
Model 8: beta&w>1	-1786.559737


Model 0 vs 1	36.727284000000054

Model 2 vs 1	0.18784999999979846

Model 8 vs 7	5.219594000000143
>C1
MTALGLVLLSMMGYSQHMQQANLGDGVATARLLSRSDWGARLPKSVEHFQ
GPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGIG
GDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNL
IAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTEG
VSSTTAPVVPHVHPQAAAPQKPHQSPPAAPKVooooo
>C2
MTALGLVLLSIMGYSQHMQQANLGDGVATARLLSRSDWGARLPKSVDHFQ
GPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGIG
GDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNL
IAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNASDG
ESSTAAPVVPHVHAQAAAPQTPHQSPPAAPKVooooo
>C3
MTALGLVLLSMMGYSQHMQQANLGDGVATARLLSRSDWGARLPKSVEHFQ
GPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGIG
GDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNL
IAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNATEG
VSSTAAPVVPHVHAQAAAPQTPHQSPPAAPKVooooo
>C4
MTALGLILLSMMGYSQHMQQANLGDGVATARLLSRSDWGARLPKSVDHFQ
GPAPYVIIHHSYMPGVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGIG
GDGMIYTGRGFNVVGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAARNL
ISFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLSETEG
VVSSTAAPVEPHVHPKAATQTPLAQSPPAAPKVoooo
>C5
MTALGLVLLSMMGYSQHMQQANLGTARLLSRSDWGARLPKSVEHFQGPAP
YVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGIGGDGM
IYAGRGFNVIGAHAPKYNDRSVGIVLIGDWRTELPPKQMLDAAKDLIAFG
VFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTEGVSST
KAPVEPHVHPQAATQQTPPKSPPAAPKVooooooooo
>C6
MTALGLVLLSMMGYSQHMQHANLGDGAATARLLSRSDWGARLPKSVEHFE
GPAPYVIIHHSYMPAVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGIG
GDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNL
IAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISGWPHFTHLNATEG
STPVPIEPHAHPQAASQTPPQSPPQSPPHAPAAAPKV
>C7
MTALGLVLLSMMGYSQPAVNLGESGVANARLLSRSDWGARLPKSVEHFQG
PAPYVIIHHSYMPGVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGIGG
DGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNLI
SFGVFKGYIDPAYKLLGHRQVRDTECPGDRLFAEITGWPHFTLLNGTETT
TSAPVEPHVHPQPVAPQSPPAAPKVoooooooooooo
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE:  ], CPU=0.00 sec, SCORE=100, Nseq=7, Len=253 

C1              MTALGLVLLSMMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVEHF
C2              MTALGLVLLSIMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVDHF
C3              MTALGLVLLSMMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVEHF
C4              MTALGLILLSMMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVDHF
C5              MTALGLVLLSMMGYSQHMQQANLG-----TARLLSRSDWGARLPKSVEHF
C6              MTALGLVLLSMMGYSQHMQHANLGD-GAATARLLSRSDWGARLPKSVEHF
C7              MTALGLVLLSMMGYSQ--PAVNLGESGVANARLLSRSDWGARLPKSVEHF
                ******:***:*****    .***     .*****************:**

C1              QGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
C2              QGPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
C3              QGPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
C4              QGPAPYVIIHHSYMPGVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
C5              QGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
C6              EGPAPYVIIHHSYMPAVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
C7              QGPAPYVIIHHSYMPGVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
                :**************.***:**:***************************

C1              GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
C2              GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
C3              GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
C4              GGDGMIYTGRGFNVVGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAARN
C5              GGDGMIYAGRGFNVIGAHAPKYNDRSVGIVLIGDWRTELPPKQMLDAAKD
C6              GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
C7              GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
                *******:******:*********:***********************::

C1              LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTE
C2              LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNASD
C3              LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNATE
C4              LISFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLSETE
C5              LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTE
C6              LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISGWPHFTHLNATE
C7              LISFGVFKGYIDPAYKLLGHRQVRDTECPGDRLFAEITGWPHFTLLNGTE
                **:***************************.******:.***** :. ::

C1              GV-SSTTAPVVPHVHPQAAAP---QKPHQSPP----AAPKVooooo----
C2              GE-SSTAAPVVPHVHAQAAAP---QTPHQSPP----AAPKVooooo----
C3              GV-SSTAAPVVPHVHAQAAAP---QTPHQSPP----AAPKVooooo----
C4              GVVSSTAAPVEPHVHPKAATQ---TPLAQSPP----AAPKVoooo-----
C5              GV-SSTKAPVEPHVHPQAATQ---QTPPKSPP----AAPKVooooooooo
C6              GS---TPVPIEPHAHPQAASQTPPQSPPQSPPHAPAAAPKV---------
C7              TT---TSAPVEPHVHPQPVAP-------QSPP----AAPKVooooooooo
                     * .*: **.*.:..:        :***    *****         

C1              ---
C2              ---
C3              ---
C4              ---
C5              ---
C6              ---
C7              ooo
                   




PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log      	S	[0] 
-genepred_score	S	[0] 	nsd
-run_name      	S	[0] 
-mem_mode      	S	[0] 	mem
-extend        	D	[1] 	1 
-extend_mode   	S	[0] 	very_fast_triplet
-max_n_pair    	D	[0] 	10 
-seq_name_for_quadruplet	S	[0] 	all
-compact       	S	[0] 	default
-clean         	S	[0] 	no
-do_self       	FL	[0] 	0
-do_normalise  	D	[0] 	1000 
-template_file 	S	[0] 
-setenv        	S	[0] 	0
-template_mode 	S	[0] 
-flip          	D	[0] 	0 
-remove_template_file	D	[0] 	0 
-profile_template_file	S	[0] 
-in            	S	[0] 
-seq           	S	[0] 
-aln           	S	[0] 
-method_limits 	S	[0] 
-method        	S	[0] 
-lib           	S	[0] 
-profile       	S	[0] 
-profile1      	S	[0] 
-profile2      	S	[0] 
-pdb           	S	[0] 
-relax_lib     	D	[0] 	1 
-filter_lib    	D	[0] 	0 
-shrink_lib    	D	[0] 	0 
-out_lib       	W_F	[0] 	no
-out_lib_mode  	S	[0] 	primary
-lib_only      	D	[0] 	0 
-outseqweight  	W_F	[0] 	no
-dpa           	FL	[0] 	0
-seq_source    	S	[0] 	ANY
-cosmetic_penalty	D	[0] 	0 
-gapopen       	D	[0] 	0 
-gapext        	D	[0] 	0 
-fgapopen      	D	[0] 	0 
-fgapext       	D	[0] 	0 
-nomatch       	D	[0] 	0 
-newtree       	W_F	[0] 	default
-tree          	W_F	[0] 	NO
-usetree       	R_F	[0] 
-tree_mode     	S	[0] 	nj
-distance_matrix_mode	S	[0] 	ktup
-distance_matrix_sim_mode	S	[0] 	idmat_sim1
-quicktree     	FL	[0] 	0
-outfile       	W_F	[0] 	default
-maximise      	FL	[1] 	1
-output        	S	[1] 	score_ascii	html	score_ascii
-len           	D	[0] 	0 
-infile        	R_F	[1] 	/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix        	S	[0] 	default
-tg_mode       	D	[0] 	1 
-profile_mode  	S	[0] 	cw_profile_profile
-profile_comparison	S	[0] 	profile
-dp_mode       	S	[0] 	linked_pair_wise
-ktuple        	D	[0] 	1 
-ndiag         	D	[0] 	0 
-diag_threshold	D	[0] 	0 
-diag_mode     	D	[0] 	0 
-sim_matrix    	S	[0] 	vasiliky
-transform     	S	[0] 
-extend_seq    	FL	[0] 	0
-outorder      	S	[0] 	input
-inorder       	S	[0] 	aligned
-seqnos        	S	[0] 	off
-case          	S	[0] 	keep
-cpu           	D	[0] 	0 
-maxnseq       	D	[0] 	1000 
-maxlen        	D	[0] 	-1 
-sample_dp     	D	[0] 	0 
-weight        	S	[0] 	default
-seq_weight    	S	[0] 	no
-align         	FL	[1] 	1
-mocca         	FL	[0] 	0
-domain        	FL	[0] 	0
-start         	D	[0] 	0 
-len           	D	[0] 	0 
-scale         	D	[0] 	0 
-mocca_interactive	FL	[0] 	0
-method_evaluate_mode	S	[0] 	default
-evaluate_mode 	S	[1] 	t_coffee_fast
-get_type      	FL	[0] 	0
-clean_aln     	D	[0] 	0 
-clean_threshold	D	[1] 	1 
-clean_iteration	D	[1] 	1 
-clean_evaluate_mode	S	[0] 	t_coffee_fast
-extend_matrix 	FL	[0] 	0
-prot_min_sim  	D	[40] 	40 
-prot_max_sim  	D	[90] 	90 
-prot_min_cov  	D	[40] 	40 
-pdb_type      	S	[0] 	d
-pdb_min_sim   	D	[35] 	35 
-pdb_max_sim   	D	[100] 	100 
-pdb_min_cov   	D	[50] 	50 
-pdb_blast_server	W_F	[0] 	EBI
-blast         	W_F	[0] 
-blast_server  	W_F	[0] 	EBI
-pdb_db        	W_F	[0] 	pdb
-protein_db    	W_F	[0] 	uniprot
-method_log    	W_F	[0] 	no
-struc_to_use  	S	[0] 
-cache         	W_F	[0] 	use
-align_pdb_param_file	W_F	[0] 	no
-align_pdb_hasch_mode	W_F	[0] 	hasch_ca_trace_bubble
-external_aligner	S	[0] 	NO
-msa_mode      	S	[0] 	tree
-master        	S	[0] 	no
-blast_nseq    	D	[0] 	0 
-lalign_n_top  	D	[0] 	10 
-iterate       	D	[1] 	0 
-trim          	D	[0] 	0 
-split         	D	[0] 	0 
-trimfile      	S	[0] 	default
-split         	D	[0] 	0 
-split_nseq_thres	D	[0] 	0 
-split_score_thres	D	[0] 	0 
-check_pdb_status	D	[0] 	0 
-clean_seq_name	D	[0] 	0 
-seq_to_keep   	S	[0] 
-dpa_master_aln	S	[0] 
-dpa_maxnseq   	D	[0] 	0 
-dpa_min_score1	D	[0] 
-dpa_min_score2	D	[0] 
-dpa_keep_tmpfile	FL	[0] 	0
-dpa_debug     	D	[0] 	0 
-multi_core    	S	[0] 	templates_jobs_relax_msa_evaluate
-n_core        	D	[0] 	0 
-max_n_proc    	D	[0] 	0 
-lib_list      	S	[0] 
-prune_lib_mode	S	[0] 	5
-tip           	S	[0] 	none
-rna_lib       	S	[0] 
-no_warning    	D	[0] 	0 
-run_local_script	D	[0] 	0 
-plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:
plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length  237 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length  237 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [12302]

Library Relaxation: Multi_proc [72]
 
Relaxation Summary: [12302]--->[11586]



UN-WEIGHTED MODE: EVERY SEQUENCE WEIGHTS 1


OUTPUT RESULTS
	#### File Type= MSA             Format= score_ascii     Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii
	#### File Type= MSA             Format= html            Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.html
	#### File Type= MSA             Format= score_ascii     Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii

# Command Line: t_coffee_ADOPS -infile /opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln -output score_ascii -special_mode evaluate -evaluate_mode t_coffee_fast  [PROGRAM:T-COFFEE]
# T-COFFEE Memory Usage: Current= 29.394 Mb, Max= 30.791 Mb
# Results Produced with T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
# T-COFFEE is available from http://www.tcoffee.org
# Register on: https://groups.google.com/group/tcoffee/
>C1
MTALGLVLLSMMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTE
GV-SSTTAPVVPHVHPQAAAP---QKPHQSPP----AAPKVooooo----
---
>C2
MTALGLVLLSIMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVDHF
QGPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNASD
GE-SSTAAPVVPHVHAQAAAP---QTPHQSPP----AAPKVooooo----
---
>C3
MTALGLVLLSMMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNATE
GV-SSTAAPVVPHVHAQAAAP---QTPHQSPP----AAPKVooooo----
---
>C4
MTALGLILLSMMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVDHF
QGPAPYVIIHHSYMPGVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVVGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAARN
LISFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLSETE
GVVSSTAAPVEPHVHPKAATQ---TPLAQSPP----AAPKVoooo-----
---
>C5
MTALGLVLLSMMGYSQHMQQANLG-----TARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYAGRGFNVIGAHAPKYNDRSVGIVLIGDWRTELPPKQMLDAAKD
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTE
GV-SSTKAPVEPHVHPQAATQ---QTPPKSPP----AAPKVooooooooo
---
>C6
MTALGLVLLSMMGYSQHMQHANLGD-GAATARLLSRSDWGARLPKSVEHF
EGPAPYVIIHHSYMPAVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISGWPHFTHLNATE
GS---TPVPIEPHAHPQAASQTPPQSPPQSPPHAPAAAPKV---------
---
>C7
MTALGLVLLSMMGYSQ--PAVNLGESGVANARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPGVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LISFGVFKGYIDPAYKLLGHRQVRDTECPGDRLFAEITGWPHFTLLNGTE
TT---TSAPVEPHVHPQPVAP-------QSPP----AAPKVooooooooo
ooo

FORMAT of file /tmp/tmp7225621295032640079aln Not Supported[FATAL:T-COFFEE]
>C1
MTALGLVLLSMMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTE
GV-SSTTAPVVPHVHPQAAAP---QKPHQSPP----AAPKVooooo----
---
>C2
MTALGLVLLSIMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVDHF
QGPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNASD
GE-SSTAAPVVPHVHAQAAAP---QTPHQSPP----AAPKVooooo----
---
>C3
MTALGLVLLSMMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNATE
GV-SSTAAPVVPHVHAQAAAP---QTPHQSPP----AAPKVooooo----
---
>C4
MTALGLILLSMMGYSQHMQQANLGD-GVATARLLSRSDWGARLPKSVDHF
QGPAPYVIIHHSYMPGVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVVGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAARN
LISFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLSETE
GVVSSTAAPVEPHVHPKAATQ---TPLAQSPP----AAPKVoooo-----
---
>C5
MTALGLVLLSMMGYSQHMQQANLG-----TARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYAGRGFNVIGAHAPKYNDRSVGIVLIGDWRTELPPKQMLDAAKD
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTE
GV-SSTKAPVEPHVHPQAATQ---QTPPKSPP----AAPKVooooooooo
---
>C6
MTALGLVLLSMMGYSQHMQHANLGD-GAATARLLSRSDWGARLPKSVEHF
EGPAPYVIIHHSYMPAVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISGWPHFTHLNATE
GS---TPVPIEPHAHPQAASQTPPQSPPQSPPHAPAAAPKV---------
---
>C7
MTALGLVLLSMMGYSQ--PAVNLGESGVANARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPGVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LISFGVFKGYIDPAYKLLGHRQVRDTECPGDRLFAEITGWPHFTLLNGTE
TT---TSAPVEPHVHPQPVAP-------QSPP----AAPKVooooooooo
ooo
input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln I:253 S:94 BS:253
# TC_SIMILARITY_MATRIX_FORMAT_01
# SEQ_INDEX C1 0
# SEQ_INDEX C2 1
# SEQ_INDEX C3 2
# SEQ_INDEX C4 3
# SEQ_INDEX C5 4
# SEQ_INDEX C6 5
# SEQ_INDEX C7 6
# PW_SEQ_DISTANCES 
BOT	    0    1	 95.36 C1	 C2	 95.36
TOP	    1    0	 95.36 C2	 C1	 95.36
BOT	    0    2	 97.47 C1	 C3	 97.47
TOP	    2    0	 97.47 C3	 C1	 97.47
BOT	    0    3	 91.95 C1	 C4	 91.95
TOP	    3    0	 91.95 C4	 C1	 91.95
BOT	    0    4	 95.71 C1	 C5	 95.71
TOP	    4    0	 95.71 C5	 C1	 95.71
BOT	    0    5	 92.61 C1	 C6	 92.61
TOP	    5    0	 92.61 C6	 C1	 92.61
BOT	    0    6	 91.27 C1	 C7	 91.27
TOP	    6    0	 91.27 C7	 C1	 91.27
BOT	    1    2	 97.89 C2	 C3	 97.89
TOP	    2    1	 97.89 C3	 C2	 97.89
BOT	    1    3	 91.53 C2	 C4	 91.53
TOP	    3    1	 91.53 C4	 C2	 91.53
BOT	    1    4	 92.27 C2	 C5	 92.27
TOP	    4    1	 92.27 C5	 C2	 92.27
BOT	    1    5	 90.87 C2	 C6	 90.87
TOP	    5    1	 90.87 C6	 C2	 90.87
BOT	    1    6	 89.08 C2	 C7	 89.08
TOP	    6    1	 89.08 C7	 C2	 89.08
BOT	    2    3	 92.80 C3	 C4	 92.80
TOP	    3    2	 92.80 C4	 C3	 92.80
BOT	    2    4	 94.42 C3	 C5	 94.42
TOP	    4    2	 94.42 C5	 C3	 94.42
BOT	    2    5	 92.61 C3	 C6	 92.61
TOP	    5    2	 92.61 C6	 C3	 92.61
BOT	    2    6	 90.83 C3	 C7	 90.83
TOP	    6    2	 90.83 C7	 C3	 90.83
BOT	    3    4	 91.38 C4	 C5	 91.38
TOP	    4    3	 91.38 C5	 C4	 91.38
BOT	    3    5	 89.13 C4	 C6	 89.13
TOP	    5    3	 89.13 C6	 C4	 89.13
BOT	    3    6	 89.04 C4	 C7	 89.04
TOP	    6    3	 89.04 C7	 C4	 89.04
BOT	    4    5	 92.48 C5	 C6	 92.48
TOP	    5    4	 92.48 C6	 C5	 92.48
BOT	    4    6	 89.52 C5	 C7	 89.52
TOP	    6    4	 89.52 C7	 C5	 89.52
BOT	    5    6	 89.73 C6	 C7	 89.73
TOP	    6    5	 89.73 C7	 C6	 89.73
AVG	 0	 C1	  *	 94.06
AVG	 1	 C2	  *	 92.83
AVG	 2	 C3	  *	 94.34
AVG	 3	 C4	  *	 90.97
AVG	 4	 C5	  *	 92.63
AVG	 5	 C6	  *	 91.24
AVG	 6	 C7	  *	 89.91
TOT	 TOT	  *	 92.28
CLUSTAL W (1.83) multiple sequence alignment

C1              ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGCTATAGTCAGCA
C2              ATGACAGCACTGGGATTAGTTCTGCTATCGATAATGGGCTATAGTCAGCA
C3              ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGCTATAGTCAGCA
C4              ATGACAGCACTGGGATTAATTCTGCTATCGATGATGGGCTATAGTCAGCA
C5              ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGCTATAGTCAGCA
C6              ATGACAGCACTGGGATTAGTTTTGCTATCAATGATGGGCTATAGCCAGCA
C7              ATGACAGCACTGGGATTAGTTTTGCTATCCATGATGGGCTATAGCCAG--
                ******************.** ******* **.*********** ***  

C1              CATGCAGCAGGCGAATCTGGGCGAC---GGTGTGGCCACCGCCCGCCTGC
C2              CATGCAGCAGGCGAATCTGGGCGAC---GGTGTGGCCACCGCCCGCCTGC
C3              CATGCAGCAGGCGAATCTGGGCGAC---GGTGTGGCCACCGCCCGCCTGC
C4              CATGCAGCAGGCAAATCTGGGCGAT---GGTGTGGCCACCGCCCGACTGC
C5              CATGCAGCAGGCGAATCTGGGC---------------ACCGCCCGGCTTC
C6              CATGCAGCATGCGAATTTGGGCGAT---GGAGCGGCCACCGCTCGACTTC
C7              ----CCCGCTGTGAATCTGGGCGAATCTGGGGTGGCCAACGCTCGACTCC
                    *.  . * .*** *****               *.*** ** ** *

C1              TGTCCCGATCCGACTGGGGTGCCCGGCTGCCCAAGTCCGTGGAGCACTTC
C2              TTTCCCGATCCGACTGGGGTGCCCGGCTGCCCAAGTCTGTGGACCACTTC
C3              TTTCCCGATCCGACTGGGGTGCACGGCTGCCCAAGTCCGTGGAGCACTTC
C4              TGTCCAGATCCGACTGGGGTGCCCGGCTGCCCAAGTCCGTGGACCACTTT
C5              TGTCCCGATCCGACTGGGGTGCCCGCCTGCCCAAGTCCGTGGAGCACTTT
C6              TGTCCCGCTCCGACTGGGGCGCCCGTCTGCCCAAGTCCGTGGAGCACTTC
C7              TGTCCCGCTCCGACTGGGGTGCCCGGCTGCCCAAATCCGTGGAGCACTTC
                * ***.*.*********** **.** ********.** ***** ***** 

C1              CAGGGTCCCGCGCCCTACGTCATCATCCATCACTCGTACATGCCGGCCGT
C2              CAGGGACCCGCGCCCTACGTCATCATCCACCACTCGTACATGCCGGCCGT
C3              CAGGGACCAGCGCCTTACGTCATCATCCACCACTCGTATATGCCGGCCGT
C4              CAGGGACCCGCGCCCTACGTCATCATCCACCACTCGTACATGCCAGGCGT
C5              CAAGGACCCGCGCCCTACGTGATCATCCACCACTCGTACATGCCAGCCGT
C6              GAGGGTCCCGCCCCCTACGTGATCATCCACCACTCTTACATGCCGGCGGT
C7              CAGGGTCCCGCCCCCTACGTGATCATCCACCACTCATATATGCCCGGCGT
                 *.**:**.** ** ***** ******** ***** ** ***** *  **

C1              GTGCTACTCCACTCCGGACTGCATGAAGAGCATGCGGGACATGCAGGACT
C2              GTGCTACTCCACTCCGGAATGCATGAAGAGCATGCGGGACATGCAGGACT
C3              GTGCTACTCAACTCCGGAATGCATGAAGAGCATGCGGGACATGCAGGACT
C4              GTGCTACTCCACTCCGGAGTGCATGAAGAGCATGCGGGACATGCAGGACT
C5              GTGCTACTCCACTCCGGACTGCATGAAGAGCATGCGGGACATGCAGGACT
C6              GTGCTATACCACTCCCGACTGCATGAAGAGCATGCGCGACATGCAGGACT
C7              TTGCTATACCACGCCGGACTGCATGAAGAGCATGCGCGACATGCAGGACT
                 ***** :*.** ** ** ***************** *************

C1              TCCATCAGCTGGAGCGCGGATGGAACGATATTGGTTATAGCTTTGGCATC
C2              TCCATCAGCTGGAGCGCGGATGGAACGATATTGGTTATAGCTTTGGCATC
C3              TTCATCAGCTGGAGCGCGGATGGAACGATATTGGTTATAGCTTTGGCATC
C4              TCCACCAGCTGGAGCGCGGATGGAACGATATCGGATATAGCTTTGGCATC
C5              TCCACCAGCTGGAGCGCGGTTGGAACGATATCGGATATAGCTTTGGCATC
C6              TCCACCAGCTGGAGCGCGGTTGGAACGACATCGGCTATAGCTTCGGCATC
C7              TCCACCAACTGGAGCGCGGCTGGAACGATATCGGCTATAGCTTTGGAATC
                * ** **.*********** ******** ** ** ******** **.***

C1              GGCGGCGATGGCATGATTTACACCGGCAGGGGATTCAATGTCATCGGAGC
C2              GGCGGCGATGGCATGATCTACACCGGCAGGGGATTCAATGTCATCGGAGC
C3              GGCGGCGATGGCATGATCTACACCGGCAGGGGATTCAATGTCATCGGAGC
C4              GGCGGCGATGGCATGATCTACACCGGCAGGGGATTCAATGTCGTCGGAGC
C5              GGCGGCGATGGCATGATCTACGCAGGCAGGGGATTCAATGTCATCGGAGC
C6              GGCGGCGATGGCATGATCTACACCGGAAGGGGATTCAACGTTATCGGAGC
C7              GGCGGCGATGGGATGATCTACACCGGAAGGGGATTCAACGTTATCGGAGC
                *********** ***** ***.*.**.*********** ** .*******

C1              TCATGCACCCAAGTACAATGACAAGAGCGTGGGCATTGTGCTGATCGGAG
C2              TCATGCACCCAAGTACAATGACAAGAGCGTGGGCATCGTGCTGATCGGAG
C3              TCATGCACCGAAGTACAATGACAAGAGCGTGGGCATTGTGCTGATCGGAG
C4              TCATGCGCCGAAGTACAATGACAAGAGCGTGGGCATCGTGCTGATCGGAG
C5              TCATGCGCCGAAGTACAATGACAGGAGCGTGGGCATCGTGCTGATCGGAG
C6              TCATGCACCCAAGTACAATGACAAGAGCGTGGGCATCGTGCTGATCGGAG
C7              TCATGCCCCTAAGTACAATGACAAGAGCGTGGGCATCGTGCTGATCGGAG
                ****** ** *************.************ *************

C1              ATTGGAGAACCGAACTGCCGCCCAAGCAGATGCTGGATGCGGCCAAGAAC
C2              ATTGGAGAACCGAACTGCCGCCCAAGCAGATGCTGGATGCGGCCAAGAAC
C3              ATTGGAGAACCGAACTGCCGCCCAAGCAGATGCTGGATGCGGCCAAGAAC
C4              ATTGGAGAACTGAACTGCCGCCCAAGCAGATGCTGGATGCGGCCAGGAAC
C5              ATTGGAGAACTGAACTTCCGCCCAAGCAGATGCTGGATGCGGCCAAGGAC
C6              ATTGGAGAACTGAACTGCCGCCCAAACAGATGCTGGACGCGGCCAAAAAC
C7              ATTGGAGAACTGAATTGCCTCCCAAACAGATGCTGGATGCGGCCAAGAAC
                ********** *** * ** *****.*********** *******...**

C1              CTGATCGCCTTTGGCGTTTTCAAGGGCTACATTGACCCTGCCTACAAGCT
C2              CTGATCGCCTTCGGAGTTTTCAAGGGCTACATTGACCCCGCCTACAAACT
C3              CTGATCGCCTTCGGCGTTTTCAAGGGCTACATTGACCCCGCCTACAAGCT
C4              CTGATCTCCTTCGGGGTGTTCAAGGGCTACATTGACCCCGCCTACAAGCT
C5              CTGATCGCCTTCGGGGTGTTCAAGGGCTACATTGACCCCGCCTACAAGCT
C6              CTGATCGCCTTCGGCGTGTTCAAGGGCTACATTGACCCCGCATACAAGCT
C7              CTGATCTCCTTTGGGGTCTTCAAGGGTTACATTGACCCCGCCTACAAGCT
                ****** **** ** ** ******** *********** **.*****.**

C1              GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGCGGCCGCCTGT
C2              GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGAGGCCGCCTCT
C3              GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGCGGCCGCCTCT
C4              GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGAGGCCGCCTGT
C5              GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGGGGCCGCCTGT
C6              GCTGGGCCACCGACAGGTTCGTGACACCGAGTGTCCCGGAGGCAGGCTGT
C7              GCTGGGCCACAGACAGGTGCGGGACACCGAGTGTCCCGGGGACAGACTGT
                **********.******* ** ** *********** ** *.*.* ** *

C1              TCGCCGAGATCTCCAGCTGGCCGCACTTTACCCACATAAACGACACCGAA
C2              TCGCCGAGATCTCCAGCTGGCCGCACTTTACCCACCTAAACGCCAGCGAC
C3              TCGCCGAGATCTCCAGCTGGCCGCACTTTACCCACCTAAACGCCACCGAA
C4              TTGCCGAGATCTCCAGCTGGCCGCACTTTACCCACCTAAGCGAAACCGAA
C5              TTGCCGAGATCTCCAGCTGGCCGCACTTTACCCACATAAACGACACCGAA
C6              TCGCGGAGATCTCCGGCTGGCCGCACTTTACCCACCTAAACGCCACCGAA
C7              TCGCTGAGATCACCGGCTGGCCGCATTTCACCCTCCTAAACGGCACCGAG
                * ** ******:**.********** ** ****:*.***.** .* *** 

C1              GGCGTC---AGCAGCACCACGGCGCCCGTCGTGCCCCACGTCCATCCACA
C2              GGCGAG---AGCAGCACTGCGGCGCCCGTCGTGCCCCATGTCCATGCACA
C3              GGCGTG---AGCAGCACTGCGGCGCCCGTCGTGCCCCATGTCCATGCACA
C4              GGCGTAGTTAGCAGCACTGCTGCGCCCGTCGAGCCCCACGTCCATCCAAA
C5              GGCGTT---AGCAGTACGAAGGCGCCGGTCGAGCCCCACGTCCATCCACA
C6              GGCAGC---------ACCCCCGTCCCCATTGAACCGCACGCACATCCCCA
C7              ACCACC---------ACTTCGGCACCCGTGGAACCCCACGTCCATCCACA
                . *.           **  . *  ** .* *:.** ** * .*** *..*

C1              GGCGGCAGCACCA---------CAAAAGCCGCACCAATCCCCGCCA----
C2              GGCGGCAGCACCA---------CAAACGCCGCACCAATCCCCGCCA----
C3              GGCGGCAGCACCA---------CAAACGCCGCACCAATCCCCGCCA----
C4              GGCGGCAACACAA---------ACGCCACTCGCCCAATCCCCGCCA----
C5              GGCGGCAACACAA---------CAAACGCCGCCCAAATCCCCGCCA----
C6              GGCGGCGTCCCAAACGCCACCCCAATCACCACCCCAATCGCCACCCCATG
C7              GCCGGTGGCGCCC---------------------CAATCCCCGCCA----
                * *** . * *..                     .**** **.**.    

C1              --------GCTGCGCCCAAGGTC---------------------------
C2              --------GCTGCGCCCAAGGTC---------------------------
C3              --------GCTGCGCCCAAGGTC---------------------------
C4              --------GCTGCGCCCAAGGTC---------------------------
C5              --------GCTGCGCCCAAGGTC---------------------------
C6              CCCCGGCAGCTGCGCCCAAGGTC---------------------------
C7              --------GCTGCGCCCAAGGTC---------------------------
                        ***************                           

C1              ---------
C2              ---------
C3              ---------
C4              ---------
C5              ---------
C6              ---------
C7              ---------
                         



>C1
ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGCTATAGTCAGCA
CATGCAGCAGGCGAATCTGGGCGAC---GGTGTGGCCACCGCCCGCCTGC
TGTCCCGATCCGACTGGGGTGCCCGGCTGCCCAAGTCCGTGGAGCACTTC
CAGGGTCCCGCGCCCTACGTCATCATCCATCACTCGTACATGCCGGCCGT
GTGCTACTCCACTCCGGACTGCATGAAGAGCATGCGGGACATGCAGGACT
TCCATCAGCTGGAGCGCGGATGGAACGATATTGGTTATAGCTTTGGCATC
GGCGGCGATGGCATGATTTACACCGGCAGGGGATTCAATGTCATCGGAGC
TCATGCACCCAAGTACAATGACAAGAGCGTGGGCATTGTGCTGATCGGAG
ATTGGAGAACCGAACTGCCGCCCAAGCAGATGCTGGATGCGGCCAAGAAC
CTGATCGCCTTTGGCGTTTTCAAGGGCTACATTGACCCTGCCTACAAGCT
GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGCGGCCGCCTGT
TCGCCGAGATCTCCAGCTGGCCGCACTTTACCCACATAAACGACACCGAA
GGCGTC---AGCAGCACCACGGCGCCCGTCGTGCCCCACGTCCATCCACA
GGCGGCAGCACCA---------CAAAAGCCGCACCAATCCCCGCCA----
--------GCTGCGCCCAAGGTC---------------------------
---------
>C2
ATGACAGCACTGGGATTAGTTCTGCTATCGATAATGGGCTATAGTCAGCA
CATGCAGCAGGCGAATCTGGGCGAC---GGTGTGGCCACCGCCCGCCTGC
TTTCCCGATCCGACTGGGGTGCCCGGCTGCCCAAGTCTGTGGACCACTTC
CAGGGACCCGCGCCCTACGTCATCATCCACCACTCGTACATGCCGGCCGT
GTGCTACTCCACTCCGGAATGCATGAAGAGCATGCGGGACATGCAGGACT
TCCATCAGCTGGAGCGCGGATGGAACGATATTGGTTATAGCTTTGGCATC
GGCGGCGATGGCATGATCTACACCGGCAGGGGATTCAATGTCATCGGAGC
TCATGCACCCAAGTACAATGACAAGAGCGTGGGCATCGTGCTGATCGGAG
ATTGGAGAACCGAACTGCCGCCCAAGCAGATGCTGGATGCGGCCAAGAAC
CTGATCGCCTTCGGAGTTTTCAAGGGCTACATTGACCCCGCCTACAAACT
GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGAGGCCGCCTCT
TCGCCGAGATCTCCAGCTGGCCGCACTTTACCCACCTAAACGCCAGCGAC
GGCGAG---AGCAGCACTGCGGCGCCCGTCGTGCCCCATGTCCATGCACA
GGCGGCAGCACCA---------CAAACGCCGCACCAATCCCCGCCA----
--------GCTGCGCCCAAGGTC---------------------------
---------
>C3
ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGCTATAGTCAGCA
CATGCAGCAGGCGAATCTGGGCGAC---GGTGTGGCCACCGCCCGCCTGC
TTTCCCGATCCGACTGGGGTGCACGGCTGCCCAAGTCCGTGGAGCACTTC
CAGGGACCAGCGCCTTACGTCATCATCCACCACTCGTATATGCCGGCCGT
GTGCTACTCAACTCCGGAATGCATGAAGAGCATGCGGGACATGCAGGACT
TTCATCAGCTGGAGCGCGGATGGAACGATATTGGTTATAGCTTTGGCATC
GGCGGCGATGGCATGATCTACACCGGCAGGGGATTCAATGTCATCGGAGC
TCATGCACCGAAGTACAATGACAAGAGCGTGGGCATTGTGCTGATCGGAG
ATTGGAGAACCGAACTGCCGCCCAAGCAGATGCTGGATGCGGCCAAGAAC
CTGATCGCCTTCGGCGTTTTCAAGGGCTACATTGACCCCGCCTACAAGCT
GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGCGGCCGCCTCT
TCGCCGAGATCTCCAGCTGGCCGCACTTTACCCACCTAAACGCCACCGAA
GGCGTG---AGCAGCACTGCGGCGCCCGTCGTGCCCCATGTCCATGCACA
GGCGGCAGCACCA---------CAAACGCCGCACCAATCCCCGCCA----
--------GCTGCGCCCAAGGTC---------------------------
---------
>C4
ATGACAGCACTGGGATTAATTCTGCTATCGATGATGGGCTATAGTCAGCA
CATGCAGCAGGCAAATCTGGGCGAT---GGTGTGGCCACCGCCCGACTGC
TGTCCAGATCCGACTGGGGTGCCCGGCTGCCCAAGTCCGTGGACCACTTT
CAGGGACCCGCGCCCTACGTCATCATCCACCACTCGTACATGCCAGGCGT
GTGCTACTCCACTCCGGAGTGCATGAAGAGCATGCGGGACATGCAGGACT
TCCACCAGCTGGAGCGCGGATGGAACGATATCGGATATAGCTTTGGCATC
GGCGGCGATGGCATGATCTACACCGGCAGGGGATTCAATGTCGTCGGAGC
TCATGCGCCGAAGTACAATGACAAGAGCGTGGGCATCGTGCTGATCGGAG
ATTGGAGAACTGAACTGCCGCCCAAGCAGATGCTGGATGCGGCCAGGAAC
CTGATCTCCTTCGGGGTGTTCAAGGGCTACATTGACCCCGCCTACAAGCT
GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGAGGCCGCCTGT
TTGCCGAGATCTCCAGCTGGCCGCACTTTACCCACCTAAGCGAAACCGAA
GGCGTAGTTAGCAGCACTGCTGCGCCCGTCGAGCCCCACGTCCATCCAAA
GGCGGCAACACAA---------ACGCCACTCGCCCAATCCCCGCCA----
--------GCTGCGCCCAAGGTC---------------------------
---------
>C5
ATGACAGCACTGGGATTAGTTCTGCTATCGATGATGGGCTATAGTCAGCA
CATGCAGCAGGCGAATCTGGGC---------------ACCGCCCGGCTTC
TGTCCCGATCCGACTGGGGTGCCCGCCTGCCCAAGTCCGTGGAGCACTTT
CAAGGACCCGCGCCCTACGTGATCATCCACCACTCGTACATGCCAGCCGT
GTGCTACTCCACTCCGGACTGCATGAAGAGCATGCGGGACATGCAGGACT
TCCACCAGCTGGAGCGCGGTTGGAACGATATCGGATATAGCTTTGGCATC
GGCGGCGATGGCATGATCTACGCAGGCAGGGGATTCAATGTCATCGGAGC
TCATGCGCCGAAGTACAATGACAGGAGCGTGGGCATCGTGCTGATCGGAG
ATTGGAGAACTGAACTTCCGCCCAAGCAGATGCTGGATGCGGCCAAGGAC
CTGATCGCCTTCGGGGTGTTCAAGGGCTACATTGACCCCGCCTACAAGCT
GCTGGGCCACCGACAGGTGCGGGATACCGAGTGTCCTGGGGGCCGCCTGT
TTGCCGAGATCTCCAGCTGGCCGCACTTTACCCACATAAACGACACCGAA
GGCGTT---AGCAGTACGAAGGCGCCGGTCGAGCCCCACGTCCATCCACA
GGCGGCAACACAA---------CAAACGCCGCCCAAATCCCCGCCA----
--------GCTGCGCCCAAGGTC---------------------------
---------
>C6
ATGACAGCACTGGGATTAGTTTTGCTATCAATGATGGGCTATAGCCAGCA
CATGCAGCATGCGAATTTGGGCGAT---GGAGCGGCCACCGCTCGACTTC
TGTCCCGCTCCGACTGGGGCGCCCGTCTGCCCAAGTCCGTGGAGCACTTC
GAGGGTCCCGCCCCCTACGTGATCATCCACCACTCTTACATGCCGGCGGT
GTGCTATACCACTCCCGACTGCATGAAGAGCATGCGCGACATGCAGGACT
TCCACCAGCTGGAGCGCGGTTGGAACGACATCGGCTATAGCTTCGGCATC
GGCGGCGATGGCATGATCTACACCGGAAGGGGATTCAACGTTATCGGAGC
TCATGCACCCAAGTACAATGACAAGAGCGTGGGCATCGTGCTGATCGGAG
ATTGGAGAACTGAACTGCCGCCCAAACAGATGCTGGACGCGGCCAAAAAC
CTGATCGCCTTCGGCGTGTTCAAGGGCTACATTGACCCCGCATACAAGCT
GCTGGGCCACCGACAGGTTCGTGACACCGAGTGTCCCGGAGGCAGGCTGT
TCGCGGAGATCTCCGGCTGGCCGCACTTTACCCACCTAAACGCCACCGAA
GGCAGC---------ACCCCCGTCCCCATTGAACCGCACGCACATCCCCA
GGCGGCGTCCCAAACGCCACCCCAATCACCACCCCAATCGCCACCCCATG
CCCCGGCAGCTGCGCCCAAGGTC---------------------------
---------
>C7
ATGACAGCACTGGGATTAGTTTTGCTATCCATGATGGGCTATAGCCAG--
----CCCGCTGTGAATCTGGGCGAATCTGGGGTGGCCAACGCTCGACTCC
TGTCCCGCTCCGACTGGGGTGCCCGGCTGCCCAAATCCGTGGAGCACTTC
CAGGGTCCCGCCCCCTACGTGATCATCCACCACTCATATATGCCCGGCGT
TTGCTATACCACGCCGGACTGCATGAAGAGCATGCGCGACATGCAGGACT
TCCACCAACTGGAGCGCGGCTGGAACGATATCGGCTATAGCTTTGGAATC
GGCGGCGATGGGATGATCTACACCGGAAGGGGATTCAACGTTATCGGAGC
TCATGCCCCTAAGTACAATGACAAGAGCGTGGGCATCGTGCTGATCGGAG
ATTGGAGAACTGAATTGCCTCCCAAACAGATGCTGGATGCGGCCAAGAAC
CTGATCTCCTTTGGGGTCTTCAAGGGTTACATTGACCCCGCCTACAAGCT
GCTGGGCCACAGACAGGTGCGGGACACCGAGTGTCCCGGGGACAGACTGT
TCGCTGAGATCACCGGCTGGCCGCATTTCACCCTCCTAAACGGCACCGAG
ACCACC---------ACTTCGGCACCCGTGGAACCCCACGTCCATCCACA
GCCGGTGGCGCCC---------------------CAATCCCCGCCA----
--------GCTGCGCCCAAGGTC---------------------------
---------
>C1
MTALGLVLLSMMGYSQHMQQANLGDoGVATARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTE
GVoSSTTAPVVPHVHPQAAAPoooQKPHQSPPooooAAPKV
>C2
MTALGLVLLSIMGYSQHMQQANLGDoGVATARLLSRSDWGARLPKSVDHF
QGPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNASD
GEoSSTAAPVVPHVHAQAAAPoooQTPHQSPPooooAAPKV
>C3
MTALGLVLLSMMGYSQHMQQANLGDoGVATARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPAVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLNATE
GVoSSTAAPVVPHVHAQAAAPoooQTPHQSPPooooAAPKV
>C4
MTALGLILLSMMGYSQHMQQANLGDoGVATARLLSRSDWGARLPKSVDHF
QGPAPYVIIHHSYMPGVCYSTPECMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVVGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAARN
LISFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHLSETE
GVVSSTAAPVEPHVHPKAATQoooTPLAQSPPooooAAPKV
>C5
MTALGLVLLSMMGYSQHMQQANLGoooooTARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYAGRGFNVIGAHAPKYNDRSVGIVLIGDWRTELPPKQMLDAAKD
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTE
GVoSSTKAPVEPHVHPQAATQoooQTPPKSPPooooAAPKV
>C6
MTALGLVLLSMMGYSQHMQHANLGDoGAATARLLSRSDWGARLPKSVEHF
EGPAPYVIIHHSYMPAVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISGWPHFTHLNATE
GSoooTPVPIEPHAHPQAASQTPPQSPPQSPPHAPAAAPKV
>C7
MTALGLVLLSMMGYSQooPAVNLGESGVANARLLSRSDWGARLPKSVEHF
QGPAPYVIIHHSYMPGVCYTTPDCMKSMRDMQDFHQLERGWNDIGYSFGI
GGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKN
LISFGVFKGYIDPAYKLLGHRQVRDTECPGDRLFAEITGWPHFTLLNGTE
TToooTSAPVEPHVHPQPVAPoooooooQSPPooooAAPKV


                            MrBayes v3.2.2 x64

                      (Bayesian Analysis of Phylogeny)

              Distributed under the GNU General Public License


               Type "help" or "help <command>" for information
                     on the commands that are available.

                   Type "about" for authorship and general
                       information about the program.



   Executing file "/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb"
   UNIX line termination
   Longest line length = 63
   Parsing file
   Expecting NEXUS formatted file
   Reading data block
      Allocated taxon set
      Allocated matrix
      Defining new matrix with 7 taxa and 759 characters
      Missing data coded as ?
      Data matrix is interleaved
      Data is Dna
      Gaps coded as -
      Matching characters coded as .
      Taxon 1 -> C1
      Taxon 2 -> C2
      Taxon 3 -> C3
      Taxon 4 -> C4
      Taxon 5 -> C5
      Taxon 6 -> C6
      Taxon 7 -> C7
      Successfully read matrix
      Setting default partition (does not divide up characters)
      Setting model defaults
      Seed (for generating default start values) = 1480080553
      Setting output file names to "/opt/ADOPS/346/PGRP-LB-PC/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run<i>.<p|t>"
   Exiting data block
   Reading mrbayes block
      Setting autoclose to yes
      Setting nowarnings to yes
      Defining charset called first_pos
      Defining charset called second_pos
      Defining charset called third_pos
      Defining partition called by_codon
      Setting by_codon as the partition, dividing characters into 3 parts.
      Setting model defaults
      Seed (for generating default start values) = 157160866
      Setting Nst to 6 for partition 1
      Setting Nst to 6 for partition 2
      Setting Nst to 6 for partition 3
      Setting Rates to Invgamma for partition 1
      Setting Rates to Invgamma for partition 2
      Setting Rates to Invgamma for partition 3
      Successfully set likelihood model parameters to all
         applicable data partitions 
      Unlinking
      Setting number of generations to 1000000
      Running Markov chain
      MCMC stamp = 6218355503
      Seed = 1303383638
      Swapseed = 1480080553
      Model settings:

         Settings for partition 1 --
            Datatype  = DNA
            Nucmodel  = 4by4
            Nst       = 6
                        Substitution rates, expressed as proportions
                        of the rate sum, have a Dirichlet prior
                        (1.00,1.00,1.00,1.00,1.00,1.00)
            Covarion  = No
            # States  = 4
                        State frequencies have a Dirichlet prior
                        (1.00,1.00,1.00,1.00)
            Rates     = Invgamma
                        Gamma shape parameter is exponentially
                        distributed with parameter (2.00).
                        Proportion of invariable sites is uniformly dist-
                        ributed on the interval (0.00,1.00).
                        Gamma distribution is approximated using 4 categories.
                        Likelihood summarized over all rate categories in each generation.

         Settings for partition 2 --
            Datatype  = DNA
            Nucmodel  = 4by4
            Nst       = 6
                        Substitution rates, expressed as proportions
                        of the rate sum, have a Dirichlet prior
                        (1.00,1.00,1.00,1.00,1.00,1.00)
            Covarion  = No
            # States  = 4
                        State frequencies have a Dirichlet prior
                        (1.00,1.00,1.00,1.00)
            Rates     = Invgamma
                        Gamma shape parameter is exponentially
                        distributed with parameter (2.00).
                        Proportion of invariable sites is uniformly dist-
                        ributed on the interval (0.00,1.00).
                        Gamma distribution is approximated using 4 categories.
                        Likelihood summarized over all rate categories in each generation.

         Settings for partition 3 --
            Datatype  = DNA
            Nucmodel  = 4by4
            Nst       = 6
                        Substitution rates, expressed as proportions
                        of the rate sum, have a Dirichlet prior
                        (1.00,1.00,1.00,1.00,1.00,1.00)
            Covarion  = No
            # States  = 4
                        State frequencies have a Dirichlet prior
                        (1.00,1.00,1.00,1.00)
            Rates     = Invgamma
                        Gamma shape parameter is exponentially
                        distributed with parameter (2.00).
                        Proportion of invariable sites is uniformly dist-
                        ributed on the interval (0.00,1.00).
                        Gamma distribution is approximated using 4 categories.
                        Likelihood summarized over all rate categories in each generation.

      Active parameters: 

                          Partition(s)
         Parameters       1  2  3
         ------------------------
         Revmat           1  1  1
         Statefreq        2  2  2
         Shape            3  3  4
         Pinvar           5  5  5
         Ratemultiplier   6  6  6
         Topology         7  7  7
         Brlens           8  8  8
         ------------------------

         Parameters can be linked or unlinked across partitions using 'link' and 'unlink'

         1 --  Parameter  = Revmat{all}
               Type       = Rates of reversible rate matrix
               Prior      = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
               Partitions = All

         2 --  Parameter  = Pi{all}
               Type       = Stationary state frequencies
               Prior      = Dirichlet
               Partitions = All

         3 --  Parameter  = Alpha{1,2}
               Type       = Shape of scaled gamma distribution of site rates
               Prior      = Exponential(2.00)
               Partitions = 1 and 2

         4 --  Parameter  = Alpha{3}
               Type       = Shape of scaled gamma distribution of site rates
               Prior      = Exponential(2.00)
               Partition  = 3

         5 --  Parameter  = Pinvar{all}
               Type       = Proportion of invariable sites
               Prior      = Uniform(0.00,1.00)
               Partitions = All

         6 --  Parameter  = Ratemultiplier{all}
               Type       = Partition-specific rate multiplier
               Prior      = Fixed(1.0)
               Partitions = All

         7 --  Parameter  = Tau{all}
               Type       = Topology
               Prior      = All topologies equally probable a priori
               Partitions = All
               Subparam.  = V{all}

         8 --  Parameter  = V{all}
               Type       = Branch lengths
               Prior      = Unconstrained:Exponential(10.0)
               Partitions = All



      The MCMC sampler will use the following moves:
         With prob.  Chain will use move
            1.06 %   Dirichlet(Revmat{all})
            1.06 %   Slider(Revmat{all})
            1.06 %   Dirichlet(Pi{all})
            1.06 %   Slider(Pi{all})
            2.13 %   Multiplier(Alpha{1,2})
            2.13 %   Multiplier(Alpha{3})
            2.13 %   Slider(Pinvar{all})
           10.64 %   ExtSPR(Tau{all},V{all})
           10.64 %   ExtTBR(Tau{all},V{all})
           10.64 %   NNI(Tau{all},V{all})
           10.64 %   ParsSPR(Tau{all},V{all})
           31.91 %   Multiplier(V{all})
           10.64 %   Nodeslider(V{all})
            4.26 %   TLMultiplier(V{all})

      Division 1 has 41 unique site patterns
      Division 2 has 37 unique site patterns
      Division 3 has 92 unique site patterns
      Initializing conditional likelihoods
      Using standard SSE likelihood calculator for division 1 (single-precision)
      Using standard SSE likelihood calculator for division 2 (single-precision)
      Using standard SSE likelihood calculator for division 3 (single-precision)
      Initializing invariable-site conditional likelihoods

      Initial log likelihoods and log prior probs for run 1:
         Chain 1 -- -2536.976614 -- -24.557203
         Chain 2 -- -2520.038407 -- -24.557203
         Chain 3 -- -2552.238142 -- -24.557203
         Chain 4 -- -2567.492253 -- -24.557203

      Initial log likelihoods and log prior probs for run 2:
         Chain 1 -- -2526.891977 -- -24.557203
         Chain 2 -- -2571.181296 -- -24.557203
         Chain 3 -- -2554.954145 -- -24.557203
         Chain 4 -- -2521.100914 -- -24.557203


      Using a relative burnin of 25.0 % for diagnostics

      Chain results (1000000 generations requested):

          0 -- [-2536.977] (-2520.038) (-2552.238) (-2567.492) * [-2526.892] (-2571.181) (-2554.954) (-2521.101) 
        500 -- (-2092.174) (-2105.979) (-2114.640) [-2094.291] * [-2094.692] (-2103.408) (-2101.512) (-2115.584) -- 0:33:19
       1000 -- [-2080.220] (-2085.408) (-2092.741) (-2078.165) * [-2089.194] (-2098.135) (-2091.223) (-2095.279) -- 0:16:39
       1500 -- (-2072.119) (-2059.480) (-2079.832) [-2056.628] * (-2086.317) (-2081.426) (-2083.156) [-2076.893] -- 0:11:05
       2000 -- (-2067.207) (-2063.931) [-2057.212] (-2055.868) * (-2062.939) [-2069.430] (-2071.451) (-2069.845) -- 0:08:19
       2500 -- [-2055.649] (-2072.190) (-2059.265) (-2056.638) * [-2055.505] (-2061.483) (-2061.172) (-2058.548) -- 0:06:39
       3000 -- (-2064.470) [-2063.298] (-2057.704) (-2060.942) * (-2055.587) (-2059.937) (-2051.048) [-2054.155] -- 0:05:32
       3500 -- [-2064.464] (-2053.591) (-2063.174) (-2056.223) * [-2055.746] (-2060.725) (-2056.000) (-2057.071) -- 0:09:29
       4000 -- (-2064.127) [-2054.504] (-2054.380) (-2052.559) * [-2055.914] (-2061.008) (-2055.952) (-2053.496) -- 0:08:18
       4500 -- (-2060.216) [-2054.194] (-2064.989) (-2056.907) * (-2058.981) [-2057.074] (-2058.245) (-2054.203) -- 0:07:22
       5000 -- (-2054.942) (-2062.464) [-2061.346] (-2059.728) * (-2058.115) [-2055.914] (-2054.287) (-2056.306) -- 0:06:38

      Average standard deviation of split frequencies: 0.078567

       5500 -- [-2050.867] (-2052.742) (-2059.533) (-2054.019) * (-2054.429) (-2062.869) (-2056.842) [-2054.642] -- 0:06:01
       6000 -- [-2055.749] (-2053.166) (-2056.524) (-2057.891) * (-2059.016) (-2057.103) (-2057.357) [-2052.980] -- 0:05:31
       6500 -- (-2057.336) [-2053.223] (-2055.124) (-2062.413) * (-2057.712) [-2052.772] (-2058.522) (-2060.772) -- 0:07:38
       7000 -- [-2057.501] (-2053.465) (-2054.052) (-2059.265) * (-2059.587) (-2057.603) (-2063.809) [-2053.653] -- 0:07:05
       7500 -- (-2056.073) [-2054.865] (-2057.466) (-2067.337) * (-2055.789) [-2059.805] (-2059.272) (-2056.371) -- 0:06:37
       8000 -- (-2060.801) [-2056.532] (-2054.340) (-2058.635) * (-2053.259) (-2060.297) [-2056.035] (-2057.999) -- 0:06:12
       8500 -- (-2067.382) (-2060.787) [-2053.113] (-2059.341) * (-2056.056) (-2059.265) (-2061.344) [-2050.267] -- 0:05:49
       9000 -- [-2058.214] (-2061.556) (-2065.049) (-2056.902) * (-2052.754) (-2051.935) [-2050.110] (-2057.508) -- 0:05:30
       9500 -- (-2052.096) [-2053.499] (-2062.923) (-2055.045) * (-2064.429) [-2052.654] (-2050.851) (-2058.051) -- 0:06:57
      10000 -- (-2058.841) (-2055.413) (-2070.137) [-2057.924] * (-2055.732) (-2058.483) [-2048.268] (-2055.071) -- 0:06:36

      Average standard deviation of split frequencies: 0.026517

      10500 -- (-2051.476) (-2056.829) (-2056.374) [-2052.845] * (-2057.526) [-2058.414] (-2055.382) (-2056.913) -- 0:06:16
      11000 -- (-2054.261) [-2051.901] (-2054.289) (-2053.880) * (-2057.812) [-2050.926] (-2051.235) (-2055.522) -- 0:05:59
      11500 -- (-2053.416) (-2054.416) (-2056.287) [-2057.919] * (-2054.515) (-2054.402) [-2052.336] (-2054.486) -- 0:05:43
      12000 -- (-2055.558) (-2047.130) [-2053.772] (-2056.257) * (-2056.787) (-2059.082) [-2053.175] (-2049.925) -- 0:05:29
      12500 -- [-2052.325] (-2063.910) (-2055.055) (-2053.078) * (-2062.664) (-2052.595) [-2055.445] (-2058.597) -- 0:06:35
      13000 -- (-2051.476) (-2058.783) [-2049.288] (-2056.509) * (-2055.742) (-2056.783) (-2055.557) [-2048.491] -- 0:06:19
      13500 -- (-2054.349) (-2054.304) [-2058.892] (-2059.503) * [-2048.973] (-2055.379) (-2063.237) (-2054.793) -- 0:06:05
      14000 -- [-2054.893] (-2058.448) (-2066.902) (-2054.866) * (-2052.493) (-2055.729) [-2055.104] (-2053.596) -- 0:05:52
      14500 -- (-2059.141) (-2060.480) (-2057.386) [-2057.645] * (-2058.448) (-2060.948) (-2054.682) [-2055.330] -- 0:05:39
      15000 -- [-2054.702] (-2053.406) (-2061.520) (-2052.439) * (-2055.580) (-2054.732) (-2063.336) [-2060.082] -- 0:05:28

      Average standard deviation of split frequencies: 0.005893

      15500 -- (-2062.041) (-2059.226) (-2053.410) [-2052.367] * (-2051.662) [-2057.964] (-2053.550) (-2064.399) -- 0:06:21
      16000 -- (-2057.054) (-2054.661) (-2056.238) [-2053.265] * (-2053.437) [-2051.947] (-2056.716) (-2057.242) -- 0:06:09
      16500 -- (-2056.662) (-2055.263) (-2058.064) [-2052.727] * (-2058.552) (-2058.376) (-2059.786) [-2054.914] -- 0:05:57
      17000 -- (-2058.969) [-2056.604] (-2060.600) (-2063.793) * (-2053.424) (-2052.353) (-2056.579) [-2059.797] -- 0:05:46
      17500 -- (-2055.923) [-2054.558] (-2064.130) (-2055.539) * (-2050.574) (-2050.747) [-2060.204] (-2058.362) -- 0:05:36
      18000 -- [-2060.685] (-2055.240) (-2057.610) (-2055.969) * (-2057.918) (-2057.571) (-2050.907) [-2059.170] -- 0:05:27
      18500 -- (-2056.178) (-2052.241) (-2054.681) [-2065.219] * (-2057.041) (-2055.522) [-2054.148] (-2062.687) -- 0:06:11
      19000 -- [-2061.245] (-2058.024) (-2053.500) (-2060.786) * (-2056.748) [-2054.859] (-2058.944) (-2059.512) -- 0:06:01
      19500 -- (-2064.455) [-2054.737] (-2054.855) (-2051.481) * [-2050.621] (-2064.941) (-2061.103) (-2060.211) -- 0:05:51
      20000 -- (-2061.910) (-2059.632) [-2061.297] (-2048.861) * (-2059.318) (-2056.166) (-2055.836) [-2056.869] -- 0:05:43

      Average standard deviation of split frequencies: 0.013686

      20500 -- (-2061.339) (-2064.040) (-2056.764) [-2050.522] * (-2056.768) (-2055.622) [-2052.029] (-2064.980) -- 0:05:34
      21000 -- (-2070.773) [-2060.800] (-2064.771) (-2055.976) * (-2058.892) (-2049.765) (-2055.709) [-2059.675] -- 0:06:12
      21500 -- (-2057.511) (-2059.175) (-2055.413) [-2054.880] * (-2057.147) [-2048.944] (-2060.305) (-2056.574) -- 0:06:04
      22000 -- (-2056.418) [-2054.927] (-2055.195) (-2059.596) * (-2054.053) (-2050.087) [-2057.005] (-2063.591) -- 0:05:55
      22500 -- (-2068.928) [-2059.804] (-2055.174) (-2055.492) * [-2052.712] (-2059.784) (-2057.873) (-2058.302) -- 0:05:47
      23000 -- (-2056.253) (-2058.162) (-2058.616) [-2054.590] * (-2057.633) (-2059.156) [-2060.780] (-2061.221) -- 0:05:39
      23500 -- (-2062.121) [-2060.312] (-2056.130) (-2050.741) * (-2055.562) (-2062.651) (-2062.387) [-2059.920] -- 0:05:32
      24000 -- [-2060.108] (-2058.187) (-2058.563) (-2053.315) * [-2060.493] (-2054.949) (-2064.878) (-2057.053) -- 0:06:06
      24500 -- (-2063.452) (-2055.677) (-2065.036) [-2052.560] * (-2061.010) (-2054.026) (-2057.831) [-2057.230] -- 0:05:58
      25000 -- (-2061.061) (-2057.621) (-2056.638) [-2051.484] * (-2061.561) (-2053.929) [-2055.736] (-2058.231) -- 0:05:51

      Average standard deviation of split frequencies: 0.024175

      25500 -- (-2059.821) (-2053.035) (-2058.547) [-2054.145] * (-2057.272) (-2052.332) (-2059.019) [-2056.043] -- 0:05:43
      26000 -- [-2065.322] (-2053.294) (-2053.605) (-2050.694) * (-2057.648) (-2064.723) [-2054.762] (-2058.338) -- 0:05:37
      26500 -- [-2062.946] (-2055.708) (-2063.382) (-2055.148) * [-2054.970] (-2068.420) (-2057.697) (-2058.498) -- 0:05:30
      27000 -- (-2055.198) (-2056.846) [-2058.676] (-2055.795) * [-2052.190] (-2056.729) (-2059.319) (-2054.340) -- 0:06:00
      27500 -- (-2057.671) (-2059.694) (-2059.446) [-2059.949] * (-2058.449) (-2055.601) (-2062.265) [-2057.219] -- 0:05:53
      28000 -- [-2055.024] (-2058.296) (-2052.583) (-2062.167) * (-2061.167) (-2062.808) (-2060.194) [-2063.131] -- 0:05:47
      28500 -- (-2058.071) (-2064.976) [-2053.015] (-2055.309) * (-2055.760) (-2061.259) (-2060.652) [-2057.138] -- 0:05:40
      29000 -- (-2068.907) (-2064.934) [-2054.381] (-2054.125) * (-2059.418) (-2056.807) (-2058.449) [-2059.644] -- 0:05:34
      29500 -- (-2057.729) (-2062.196) [-2059.511] (-2058.279) * (-2059.375) (-2052.769) [-2060.253] (-2057.107) -- 0:05:28
      30000 -- (-2054.077) (-2059.767) (-2058.580) [-2057.574] * (-2052.816) [-2057.800] (-2057.922) (-2062.970) -- 0:05:55

      Average standard deviation of split frequencies: 0.015372

      30500 -- (-2060.719) (-2064.763) (-2056.669) [-2066.887] * [-2052.105] (-2065.296) (-2051.368) (-2063.993) -- 0:05:49
      31000 -- [-2052.921] (-2062.186) (-2058.338) (-2054.611) * (-2061.132) [-2049.955] (-2059.163) (-2056.523) -- 0:05:43
      31500 -- (-2057.355) (-2063.331) (-2059.776) [-2056.627] * (-2053.345) (-2049.827) (-2052.908) [-2051.123] -- 0:05:38
      32000 -- [-2051.581] (-2063.565) (-2057.701) (-2057.913) * (-2060.641) (-2054.926) [-2051.018] (-2052.195) -- 0:05:32
      32500 -- (-2057.437) (-2061.335) [-2059.240] (-2057.700) * (-2059.549) (-2056.832) [-2051.094] (-2051.850) -- 0:05:27
      33000 -- [-2062.855] (-2066.405) (-2052.195) (-2063.295) * [-2058.171] (-2062.524) (-2059.358) (-2062.300) -- 0:05:51
      33500 -- (-2060.381) [-2056.072] (-2060.999) (-2063.577) * (-2058.815) [-2057.153] (-2060.842) (-2059.435) -- 0:05:46
      34000 -- [-2052.440] (-2057.614) (-2058.048) (-2059.028) * (-2057.460) (-2068.019) [-2054.901] (-2063.341) -- 0:05:40
      34500 -- (-2060.235) (-2055.285) (-2058.655) [-2060.411] * (-2062.857) (-2055.598) [-2059.990] (-2062.931) -- 0:05:35
      35000 -- (-2055.285) (-2055.120) [-2055.987] (-2059.314) * (-2053.815) [-2059.147] (-2059.970) (-2057.352) -- 0:05:30

      Average standard deviation of split frequencies: 0.021824

      35500 -- (-2055.816) (-2064.342) [-2053.957] (-2054.391) * (-2052.723) [-2055.536] (-2060.435) (-2060.659) -- 0:05:53
      36000 -- [-2054.551] (-2060.949) (-2056.592) (-2055.196) * (-2053.007) (-2054.573) (-2059.259) [-2054.696] -- 0:05:48
      36500 -- (-2051.179) (-2054.487) (-2056.029) [-2060.533] * (-2061.435) (-2061.111) (-2063.213) [-2056.027] -- 0:05:43
      37000 -- [-2049.843] (-2056.404) (-2054.318) (-2058.899) * (-2057.314) (-2057.820) [-2063.613] (-2056.748) -- 0:05:38
      37500 -- (-2053.537) [-2056.893] (-2058.669) (-2053.227) * [-2054.773] (-2059.448) (-2059.411) (-2058.087) -- 0:05:33
      38000 -- (-2059.281) (-2055.252) (-2055.161) [-2056.175] * [-2059.733] (-2059.685) (-2056.832) (-2063.127) -- 0:05:29
      38500 -- (-2061.638) [-2052.637] (-2057.091) (-2052.124) * (-2051.839) [-2059.199] (-2059.130) (-2067.164) -- 0:05:49
      39000 -- [-2060.609] (-2050.763) (-2053.204) (-2060.163) * (-2055.048) [-2059.662] (-2057.614) (-2059.942) -- 0:05:44
      39500 -- (-2051.775) (-2057.565) [-2055.272] (-2062.925) * (-2059.718) (-2060.281) (-2054.948) [-2059.475] -- 0:05:40
      40000 -- (-2051.514) (-2056.669) [-2051.615] (-2065.969) * [-2058.939] (-2063.111) (-2060.353) (-2054.923) -- 0:05:36

      Average standard deviation of split frequencies: 0.023184

      40500 -- (-2056.265) (-2053.103) (-2055.182) [-2059.977] * (-2062.692) (-2061.302) [-2056.722] (-2058.708) -- 0:05:31
      41000 -- (-2055.268) (-2058.634) (-2063.395) [-2053.118] * [-2051.864] (-2065.592) (-2053.186) (-2064.374) -- 0:05:27
      41500 -- (-2049.832) (-2059.093) (-2051.885) [-2057.176] * (-2058.247) (-2068.429) [-2050.461] (-2057.309) -- 0:05:46
      42000 -- [-2054.221] (-2062.097) (-2054.659) (-2054.382) * (-2050.795) [-2057.554] (-2050.291) (-2058.511) -- 0:05:42
      42500 -- (-2061.321) [-2056.897] (-2055.329) (-2058.814) * (-2052.249) (-2052.915) (-2055.812) [-2059.872] -- 0:05:37
      43000 -- (-2061.658) [-2059.679] (-2057.624) (-2061.619) * (-2059.224) (-2057.974) (-2052.555) [-2061.305] -- 0:05:33
      43500 -- [-2054.865] (-2059.447) (-2065.610) (-2057.097) * (-2062.806) (-2059.899) [-2059.718] (-2061.363) -- 0:05:29
      44000 -- (-2054.198) [-2056.752] (-2058.197) (-2057.110) * (-2061.261) [-2059.555] (-2054.627) (-2060.684) -- 0:05:25
      44500 -- (-2061.451) [-2052.884] (-2051.456) (-2055.775) * [-2068.125] (-2061.547) (-2063.921) (-2057.619) -- 0:05:43
      45000 -- (-2056.553) (-2056.721) (-2053.908) [-2049.820] * (-2056.684) (-2055.002) (-2059.213) [-2055.769] -- 0:05:39

      Average standard deviation of split frequencies: 0.030744

      45500 -- (-2054.490) (-2060.102) [-2054.931] (-2055.693) * (-2063.724) (-2054.821) (-2049.571) [-2055.286] -- 0:05:35
      46000 -- (-2063.223) [-2053.026] (-2060.799) (-2054.757) * [-2050.020] (-2051.941) (-2052.498) (-2057.089) -- 0:05:31
      46500 -- [-2054.583] (-2055.685) (-2054.626) (-2052.204) * (-2055.605) (-2060.050) [-2054.394] (-2056.607) -- 0:05:28
      47000 -- [-2052.541] (-2052.605) (-2057.842) (-2052.409) * [-2056.662] (-2053.516) (-2050.121) (-2052.412) -- 0:05:24
      47500 -- (-2064.654) [-2054.439] (-2056.296) (-2062.568) * (-2065.679) [-2052.402] (-2051.039) (-2060.448) -- 0:05:40
      48000 -- (-2052.246) (-2049.598) [-2053.110] (-2054.179) * (-2061.750) [-2052.843] (-2051.758) (-2057.707) -- 0:05:37
      48500 -- (-2049.330) (-2052.649) (-2053.597) [-2051.770] * (-2055.131) [-2051.121] (-2062.150) (-2066.094) -- 0:05:33
      49000 -- [-2057.599] (-2054.012) (-2051.363) (-2054.164) * [-2055.771] (-2051.541) (-2054.151) (-2056.423) -- 0:05:29
      49500 -- (-2061.573) (-2054.329) [-2053.549] (-2059.630) * [-2051.456] (-2049.401) (-2055.639) (-2058.540) -- 0:05:26
      50000 -- (-2056.865) [-2063.198] (-2056.072) (-2062.624) * [-2051.792] (-2056.294) (-2052.417) (-2052.952) -- 0:05:23

      Average standard deviation of split frequencies: 0.031013

      50500 -- [-2055.642] (-2062.162) (-2054.760) (-2063.466) * [-2056.812] (-2056.217) (-2052.832) (-2054.885) -- 0:05:38
      51000 -- (-2056.664) [-2051.613] (-2054.436) (-2056.710) * [-2057.649] (-2051.630) (-2052.897) (-2053.017) -- 0:05:34
      51500 -- [-2063.145] (-2060.360) (-2058.894) (-2060.108) * (-2052.322) [-2062.009] (-2054.338) (-2058.662) -- 0:05:31
      52000 -- (-2060.282) (-2053.041) (-2058.274) [-2056.611] * [-2053.220] (-2055.337) (-2058.802) (-2054.434) -- 0:05:28
      52500 -- (-2060.436) (-2059.918) [-2054.510] (-2064.359) * [-2052.424] (-2058.182) (-2061.177) (-2057.474) -- 0:05:24
      53000 -- (-2058.201) [-2057.920] (-2057.401) (-2064.792) * (-2055.962) [-2053.774] (-2053.283) (-2054.587) -- 0:05:39
      53500 -- (-2059.455) (-2071.978) [-2055.496] (-2061.002) * (-2054.710) [-2055.799] (-2058.330) (-2058.351) -- 0:05:36
      54000 -- (-2052.784) [-2053.516] (-2060.689) (-2067.034) * (-2054.266) (-2060.224) (-2053.063) [-2055.177] -- 0:05:32
      54500 -- (-2063.156) (-2054.162) [-2061.032] (-2057.853) * [-2055.281] (-2053.508) (-2059.682) (-2060.567) -- 0:05:29
      55000 -- [-2054.503] (-2056.223) (-2060.984) (-2057.831) * (-2056.839) (-2052.429) [-2053.825] (-2055.508) -- 0:05:26

      Average standard deviation of split frequencies: 0.019642

      55500 -- [-2053.449] (-2054.560) (-2060.697) (-2059.662) * (-2057.630) [-2060.118] (-2054.771) (-2053.549) -- 0:05:23
      56000 -- (-2056.716) (-2054.939) [-2057.548] (-2058.698) * (-2062.711) (-2054.636) [-2055.828] (-2056.749) -- 0:05:37
      56500 -- (-2053.440) [-2055.797] (-2059.551) (-2057.722) * (-2062.239) (-2055.887) (-2054.486) [-2056.609] -- 0:05:33
      57000 -- (-2056.028) [-2056.419] (-2053.571) (-2055.212) * (-2058.558) (-2058.292) (-2057.406) [-2059.077] -- 0:05:30
      57500 -- [-2057.989] (-2061.211) (-2049.810) (-2057.654) * [-2059.698] (-2063.528) (-2055.949) (-2059.112) -- 0:05:27
      58000 -- [-2055.971] (-2056.660) (-2059.599) (-2059.047) * (-2065.268) (-2056.935) [-2053.882] (-2056.689) -- 0:05:24
      58500 -- [-2052.730] (-2054.644) (-2061.603) (-2059.770) * [-2060.467] (-2061.839) (-2055.542) (-2061.075) -- 0:05:21
      59000 -- (-2051.338) [-2062.133] (-2057.826) (-2061.060) * (-2057.130) (-2060.403) [-2048.499] (-2057.284) -- 0:05:34
      59500 -- (-2055.042) [-2051.020] (-2062.406) (-2054.425) * (-2061.249) (-2060.174) (-2054.128) [-2059.693] -- 0:05:31
      60000 -- (-2055.727) (-2056.141) [-2062.990] (-2057.484) * [-2053.348] (-2058.835) (-2056.283) (-2057.031) -- 0:05:29

      Average standard deviation of split frequencies: 0.015541

      60500 -- [-2066.037] (-2053.979) (-2057.148) (-2062.393) * (-2057.096) (-2058.935) [-2053.265] (-2057.163) -- 0:05:26
      61000 -- (-2054.627) (-2058.274) (-2069.448) [-2062.325] * [-2055.569] (-2051.936) (-2063.487) (-2058.740) -- 0:05:23
      61500 -- [-2056.590] (-2057.521) (-2061.944) (-2058.431) * [-2064.334] (-2055.393) (-2056.291) (-2055.650) -- 0:05:20
      62000 -- (-2061.318) (-2061.387) (-2069.538) [-2060.844] * [-2066.317] (-2060.255) (-2057.643) (-2062.422) -- 0:05:32
      62500 -- (-2059.223) [-2051.470] (-2061.963) (-2065.633) * (-2065.066) [-2057.576] (-2057.612) (-2057.673) -- 0:05:30
      63000 -- (-2060.835) (-2054.086) (-2061.090) [-2058.161] * [-2054.838] (-2055.620) (-2057.172) (-2056.612) -- 0:05:27
      63500 -- (-2060.221) [-2050.615] (-2063.539) (-2058.304) * (-2056.770) (-2057.762) (-2059.154) [-2055.445] -- 0:05:24
      64000 -- (-2062.092) [-2052.252] (-2062.987) (-2060.121) * (-2060.175) (-2060.703) [-2052.397] (-2051.021) -- 0:05:21
      64500 -- (-2051.825) (-2062.034) (-2061.103) [-2060.093] * (-2061.597) (-2054.341) [-2057.442] (-2062.153) -- 0:05:19
      65000 -- (-2058.993) (-2054.007) (-2058.315) [-2053.147] * (-2061.695) [-2050.082] (-2054.209) (-2056.478) -- 0:05:30

      Average standard deviation of split frequencies: 0.005952

      65500 -- (-2057.009) (-2064.002) (-2056.568) [-2056.956] * [-2055.078] (-2052.765) (-2054.436) (-2061.136) -- 0:05:28
      66000 -- (-2057.086) (-2062.251) (-2053.004) [-2066.879] * (-2062.167) [-2056.787] (-2059.760) (-2057.221) -- 0:05:25
      66500 -- (-2062.239) [-2065.520] (-2058.004) (-2057.859) * [-2055.228] (-2056.468) (-2060.045) (-2055.308) -- 0:05:22
      67000 -- [-2057.035] (-2068.961) (-2059.964) (-2055.267) * (-2052.332) (-2055.939) [-2063.217] (-2059.280) -- 0:05:20
      67500 -- (-2057.086) (-2063.115) (-2061.758) [-2051.824] * (-2054.863) [-2053.971] (-2054.415) (-2064.456) -- 0:05:31
      68000 -- [-2053.865] (-2060.973) (-2054.424) (-2053.026) * (-2054.537) (-2059.471) [-2060.709] (-2068.059) -- 0:05:28
      68500 -- (-2050.540) (-2057.501) (-2064.052) [-2055.392] * (-2059.096) [-2060.491] (-2059.138) (-2064.939) -- 0:05:26
      69000 -- (-2056.628) (-2056.240) (-2063.633) [-2052.808] * (-2055.555) [-2061.368] (-2052.643) (-2062.640) -- 0:05:23
      69500 -- (-2057.993) (-2056.673) (-2052.298) [-2053.472] * [-2055.324] (-2068.209) (-2055.478) (-2066.070) -- 0:05:21
      70000 -- (-2060.122) (-2061.143) [-2060.063] (-2058.804) * [-2064.239] (-2065.819) (-2057.810) (-2056.392) -- 0:05:18

      Average standard deviation of split frequencies: 0.010006

      70500 -- (-2053.440) (-2065.525) [-2052.989] (-2051.766) * (-2059.361) [-2062.374] (-2055.966) (-2058.560) -- 0:05:29
      71000 -- (-2052.041) (-2066.549) (-2055.237) [-2055.216] * (-2056.550) (-2065.377) (-2053.410) [-2061.097] -- 0:05:27
      71500 -- [-2056.804] (-2058.603) (-2054.432) (-2055.165) * [-2056.699] (-2064.904) (-2059.459) (-2059.706) -- 0:05:24
      72000 -- (-2056.543) [-2053.448] (-2056.757) (-2057.302) * [-2052.527] (-2057.813) (-2059.172) (-2056.345) -- 0:05:22
      72500 -- (-2059.374) (-2058.121) (-2067.536) [-2051.784] * (-2058.298) (-2062.294) (-2061.684) [-2055.905] -- 0:05:19
      73000 -- (-2060.996) (-2063.521) [-2054.125] (-2053.216) * (-2055.884) [-2055.242] (-2058.353) (-2053.112) -- 0:05:17
      73500 -- (-2063.523) (-2057.355) [-2053.153] (-2049.038) * (-2060.972) (-2058.648) (-2051.266) [-2052.537] -- 0:05:27
      74000 -- (-2064.284) (-2056.068) [-2049.045] (-2058.271) * (-2059.868) (-2062.964) (-2059.217) [-2051.605] -- 0:05:25
      74500 -- (-2062.858) (-2066.724) (-2054.155) [-2056.949] * [-2057.635] (-2056.638) (-2055.410) (-2056.285) -- 0:05:22
      75000 -- (-2054.519) (-2064.664) (-2057.679) [-2055.869] * (-2053.725) (-2061.471) (-2059.357) [-2056.192] -- 0:05:20

      Average standard deviation of split frequencies: 0.007236

      75500 -- (-2064.964) (-2056.570) (-2058.091) [-2059.549] * (-2053.055) (-2053.840) (-2059.312) [-2057.544] -- 0:05:18
      76000 -- [-2051.465] (-2055.429) (-2056.605) (-2056.626) * (-2060.349) [-2065.925] (-2064.025) (-2055.111) -- 0:05:16
      76500 -- [-2051.380] (-2059.245) (-2057.527) (-2065.949) * [-2056.792] (-2053.248) (-2057.320) (-2055.293) -- 0:05:25
      77000 -- (-2057.594) (-2057.369) (-2056.311) [-2057.170] * (-2061.072) (-2059.230) [-2049.938] (-2049.414) -- 0:05:23
      77500 -- (-2057.842) (-2062.781) (-2060.637) [-2062.157] * (-2062.373) (-2052.245) (-2056.313) [-2053.482] -- 0:05:21
      78000 -- (-2050.779) [-2055.395] (-2054.791) (-2057.936) * (-2062.996) (-2057.633) (-2056.713) [-2052.179] -- 0:05:19
      78500 -- (-2058.430) (-2058.474) [-2052.689] (-2058.007) * (-2051.674) (-2052.551) (-2054.646) [-2051.648] -- 0:05:16
      79000 -- (-2054.870) (-2056.810) (-2061.062) [-2057.616] * [-2058.037] (-2051.588) (-2057.072) (-2060.843) -- 0:05:14
      79500 -- [-2058.406] (-2051.007) (-2061.230) (-2056.652) * (-2058.920) (-2058.143) [-2052.406] (-2059.881) -- 0:05:24
      80000 -- (-2057.374) [-2055.642] (-2065.999) (-2058.084) * (-2058.022) (-2056.950) (-2056.093) [-2050.901] -- 0:05:22

      Average standard deviation of split frequencies: 0.002922

      80500 -- (-2055.434) (-2048.887) [-2063.731] (-2064.601) * (-2060.955) (-2056.218) (-2056.113) [-2052.648] -- 0:05:19
      81000 -- (-2052.525) (-2070.545) [-2056.790] (-2070.653) * [-2060.086] (-2062.878) (-2052.570) (-2059.934) -- 0:05:17
      81500 -- (-2057.781) (-2056.989) (-2056.423) [-2053.984] * (-2058.574) [-2055.637] (-2056.423) (-2058.864) -- 0:05:15
      82000 -- [-2054.473] (-2055.637) (-2062.442) (-2052.228) * (-2055.266) (-2056.183) [-2052.956] (-2054.751) -- 0:05:13
      82500 -- (-2056.562) (-2062.540) [-2057.635] (-2053.771) * [-2055.548] (-2057.752) (-2055.929) (-2056.171) -- 0:05:22
      83000 -- (-2061.807) (-2057.433) (-2064.164) [-2056.068] * (-2053.984) (-2056.936) (-2060.605) [-2057.870] -- 0:05:20
      83500 -- (-2055.359) (-2055.935) (-2062.337) [-2057.257] * (-2053.794) (-2062.095) [-2053.661] (-2058.368) -- 0:05:18
      84000 -- (-2051.931) (-2061.189) (-2053.338) [-2058.706] * [-2054.085] (-2052.149) (-2061.859) (-2062.721) -- 0:05:16
      84500 -- (-2057.198) (-2064.806) (-2050.038) [-2058.727] * (-2054.436) [-2058.213] (-2059.244) (-2052.910) -- 0:05:14
      85000 -- [-2054.303] (-2059.334) (-2059.263) (-2057.937) * [-2057.774] (-2059.418) (-2057.870) (-2055.051) -- 0:05:22

      Average standard deviation of split frequencies: 0.008222

      85500 -- (-2057.669) (-2055.946) [-2056.102] (-2054.124) * [-2054.709] (-2063.534) (-2060.125) (-2056.768) -- 0:05:20
      86000 -- (-2048.706) (-2065.175) (-2052.573) [-2056.394] * [-2052.285] (-2057.937) (-2057.335) (-2063.029) -- 0:05:18
      86500 -- (-2056.345) (-2055.754) [-2052.263] (-2056.133) * (-2054.283) [-2056.990] (-2065.906) (-2056.035) -- 0:05:16
      87000 -- (-2059.344) (-2062.183) (-2053.109) [-2056.379] * (-2057.113) [-2059.333] (-2058.335) (-2053.209) -- 0:05:14
      87500 -- (-2059.526) [-2059.051] (-2055.547) (-2056.729) * (-2053.511) [-2051.544] (-2062.754) (-2060.323) -- 0:05:12
      88000 -- (-2065.771) [-2058.834] (-2058.007) (-2070.012) * [-2053.954] (-2053.940) (-2058.636) (-2068.863) -- 0:05:21
      88500 -- (-2058.464) [-2063.733] (-2071.783) (-2062.140) * (-2055.870) (-2055.024) [-2055.476] (-2057.889) -- 0:05:19
      89000 -- [-2048.185] (-2062.387) (-2074.119) (-2060.901) * [-2058.356] (-2054.364) (-2059.956) (-2057.142) -- 0:05:17
      89500 -- (-2056.371) [-2051.674] (-2056.049) (-2057.447) * (-2062.468) (-2052.972) (-2056.425) [-2055.674] -- 0:05:15
      90000 -- (-2056.695) [-2056.885] (-2055.510) (-2055.996) * (-2056.264) (-2057.415) (-2050.818) [-2049.489] -- 0:05:13

      Average standard deviation of split frequencies: 0.009532

      90500 -- [-2057.482] (-2052.779) (-2062.686) (-2056.898) * [-2061.585] (-2057.306) (-2056.086) (-2056.459) -- 0:05:11
      91000 -- (-2058.445) (-2057.194) (-2054.964) [-2055.431] * (-2061.490) (-2054.670) [-2051.308] (-2057.857) -- 0:05:19
      91500 -- (-2055.243) (-2057.266) (-2053.855) [-2057.888] * (-2057.942) (-2060.853) (-2060.617) [-2053.319] -- 0:05:17
      92000 -- [-2052.951] (-2058.288) (-2059.988) (-2062.589) * [-2061.994] (-2058.352) (-2050.655) (-2052.647) -- 0:05:15
      92500 -- [-2055.828] (-2057.221) (-2059.186) (-2064.370) * [-2062.711] (-2054.418) (-2052.352) (-2058.088) -- 0:05:13
      93000 -- (-2056.167) (-2062.380) [-2057.087] (-2061.575) * (-2062.036) (-2057.170) [-2057.696] (-2058.034) -- 0:05:12
      93500 -- [-2057.822] (-2064.022) (-2055.588) (-2063.855) * (-2064.609) [-2052.595] (-2052.719) (-2055.666) -- 0:05:10
      94000 -- [-2057.749] (-2053.525) (-2060.694) (-2062.861) * (-2057.389) (-2054.491) [-2058.243] (-2055.926) -- 0:05:18
      94500 -- [-2056.223] (-2053.694) (-2054.618) (-2059.729) * [-2059.171] (-2063.052) (-2052.261) (-2058.124) -- 0:05:16
      95000 -- (-2054.152) [-2054.867] (-2057.260) (-2064.578) * (-2055.013) (-2063.465) (-2058.651) [-2059.482] -- 0:05:14

      Average standard deviation of split frequencies: 0.009003

      95500 -- (-2054.117) (-2057.797) (-2062.482) [-2058.024] * (-2063.638) (-2063.744) (-2056.178) [-2053.940] -- 0:05:12
      96000 -- (-2064.580) (-2053.608) [-2058.397] (-2059.054) * (-2056.753) (-2066.717) (-2051.232) [-2051.022] -- 0:05:10
      96500 -- [-2053.321] (-2053.647) (-2059.383) (-2057.862) * [-2058.545] (-2062.564) (-2052.647) (-2054.916) -- 0:05:08
      97000 -- [-2052.820] (-2064.398) (-2058.997) (-2060.031) * (-2062.368) (-2057.038) [-2051.070] (-2055.134) -- 0:05:16
      97500 -- (-2059.309) (-2053.449) (-2057.665) [-2054.254] * (-2061.601) [-2059.760] (-2054.960) (-2064.366) -- 0:05:14
      98000 -- (-2055.572) (-2057.659) (-2055.056) [-2052.323] * (-2065.629) (-2059.711) [-2057.459] (-2057.114) -- 0:05:12
      98500 -- [-2056.859] (-2051.240) (-2058.359) (-2059.791) * [-2053.886] (-2064.355) (-2055.644) (-2055.333) -- 0:05:11
      99000 -- (-2055.901) (-2057.425) (-2055.290) [-2058.121] * (-2061.831) (-2062.195) (-2055.910) [-2059.521] -- 0:05:09
      99500 -- [-2054.726] (-2052.023) (-2060.