--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Sat Dec 10 02:26:02 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/325/nkd-PB/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/325/nkd-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/325/nkd-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/325/nkd-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -5089.79 -5103.18
2 -5089.35 -5103.67
--------------------------------------
TOTAL -5089.55 -5103.45
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/325/nkd-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/325/nkd-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/325/nkd-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.503200 0.001553 0.431010 0.583212 0.501100 1167.67 1233.12 1.000
r(A<->C){all} 0.065476 0.000133 0.043309 0.087562 0.065288 816.34 898.26 1.000
r(A<->G){all} 0.164292 0.000422 0.126686 0.205815 0.163483 1106.93 1135.67 1.000
r(A<->T){all} 0.106425 0.000525 0.063222 0.150321 0.105321 815.21 827.44 1.000
r(C<->G){all} 0.095433 0.000198 0.068631 0.122182 0.094530 927.54 1012.63 1.000
r(C<->T){all} 0.445223 0.001216 0.384464 0.519995 0.445305 447.59 791.94 1.000
r(G<->T){all} 0.123150 0.000604 0.075428 0.171322 0.121948 867.66 899.76 1.000
pi(A){all} 0.260297 0.000094 0.240630 0.278652 0.260241 1086.42 1149.67 1.000
pi(C){all} 0.348951 0.000112 0.329190 0.370499 0.349037 1171.18 1206.23 1.000
pi(G){all} 0.268056 0.000094 0.249036 0.286584 0.268029 1030.56 1154.48 1.000
pi(T){all} 0.122696 0.000048 0.110340 0.137209 0.122628 869.94 989.37 1.000
alpha{1,2} 0.252702 0.005575 0.113975 0.393663 0.245623 617.37 688.95 1.000
alpha{3} 1.472105 0.421492 0.438438 2.731180 1.346534 825.22 901.75 1.000
pinvar{all} 0.327987 0.009761 0.126665 0.508803 0.340840 649.98 660.99 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -4097.859599
Model 2: PositiveSelection -4096.555314
Model 0: one-ratio -4170.697307
Model 3: discrete -4095.980489
Model 7: beta -4099.331377
Model 8: beta&w>1 -4096.071671
Model 0 vs 1 145.67541600000004
Model 2 vs 1 2.608570000000327
Model 8 vs 7 6.519412000001466
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_nkd-PB)
Pr(w>1) post mean +- SE for w
84 S 0.913 1.886
92 S 0.630 1.486
99 G 0.709 1.598
100 H 0.647 1.512
101 T 0.674 1.548
153 T 0.820 1.759
319 A 0.580 1.414
320 A 0.943 1.928
335 Q 0.797 1.723
336 S 0.897 1.863
338 S 0.938 1.922
339 A 0.625 1.478
340 R 0.677 1.554
487 H 0.782 1.703
488 S 0.838 1.781
489 S 0.701 1.588
490 H 0.678 1.555
491 S 0.949 1.937
508 S 0.868 1.822
510 V 0.648 1.498
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_nkd-PB)
Pr(w>1) post mean +- SE for w
84 S 0.910 2.131 +- 0.625
92 S 0.637 1.664 +- 0.838
99 G 0.720 1.812 +- 0.808
100 H 0.653 1.692 +- 0.831
101 T 0.687 1.754 +- 0.824
102 A 0.514 1.419 +- 0.899
153 T 0.815 1.976 +- 0.727
319 A 0.586 1.574 +- 0.845
320 A 0.931 2.163 +- 0.591
335 Q 0.800 1.949 +- 0.749
336 S 0.902 2.120 +- 0.641
338 S 0.927 2.155 +- 0.598
339 A 0.646 1.682 +- 0.843
340 R 0.684 1.748 +- 0.822
487 H 0.790 1.932 +- 0.759
488 S 0.850 2.036 +- 0.706
489 S 0.715 1.803 +- 0.811
490 H 0.695 1.769 +- 0.823
491 S 0.943 2.181 +- 0.577
508 S 0.877 2.081 +- 0.674
510 V 0.684 1.738 +- 0.867
>C1
MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
LVSERDNNIQLRSPVVNIITTPPGNASGAGSKQQSHHQTNHHSSGRSHPG
HTAHPQDVSSGGSHSKHLRISSTSNGKHGKYSNMQQQLPQDEDVVDAAAT
MQQQQHTGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKSSQPLQFSFTFY
DLDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTINVRLTVSPEGK
SKSQPVVPVPVAAGFSSSHASKLKKLPTGLAAMSKPLAGGGVGSGGASAL
TTSAGNRRQHRYRPRKLIKSDDEDDDSNSEKEKDAAHAPAADQPSGSGTK
ATGKSHHHQSQSARYHQKNNSRAEQCCTEQNTPDNGHNTYENMLNLKCCK
PEVDQVDCPSHRQHHQSHPNHQMRQQDIYMKQATQRVKMLRRARKQKKTP
SQCESHTATGSTTTTTTTATPTLQYGLENTHVNYQPQSGRPAVAAQLQST
HGGAHHPQHSSSSAGHRGQRSAAPPHSSHSSQPPQPPRASPTAHTYLPSA
VGHoooooooooooooooooooooo
>C2
MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
LVSERDNNIQLRSPVVNIITTPPGNASGAGSKQQSHHQTNHHSSARSHPG
HAVHPQDVSTGGSHSKHLRISSTSNGKHGKYSNMQQQLPQDEDVVDAAAT
MQQQQQDTGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKSSQPLQFSFTF
YDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTINVRLTVSPEG
KSKSQPVVPVPVAVGYSSSHASKLKKLPTGLAAMSKPLAGGGVGSGGATA
LTTSAGNRRQHRYRPRKLIKSDDEDDDSNSEKEKDAAHAPAADQPSGSGT
KASEKSHHHQAQSARYHQKNNSRAEQCCTEQNTADNGHNTYENMLNLKCC
KPEVDQVDCPSHRQHHQSHQNHQMRQQDIYMKQATQRVKMLRRARKQKKT
PSQCESHTATGSTTTTTTTATPTLQYGLENTHVNYQPQSGRPAVAAQLQS
THGGGHHPQHSSGSAGHRGQRSAAPPHSSHSSQPPQPPRASPTAHTYLPS
AVGHooooooooooooooooooooo
>C3
MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
LVSERDNNIQLRSPVVNIITTPPGNASGAGSKQQSHHQTNHHSSGRSHPG
HAVHPQDVSSGGSHSKHLRISSTSNGKHGKYSNMQQQLPQDEDVVDAAAT
MQQQQQHTGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKSSQPLQFSFTF
YDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTINVRLTVSPEG
KSKSQPVVPVPVAAGFSSSHASKLKKLPTGLAAMSKPLAGGGVGSGGATA
LTTSAGNRRQHRYRPRKLIKSDDEDDDSNSEKEKDAAHAPAADQPSGSGT
KATGKSHHHQAQSARYHQKNNSRAEQCCTEQNTPDNGHNTYENMLNLKCC
KPEVDQVDCPSHRQHHQSHQNHQMRQQDIYMKQATQRVKMLRRARKQKKT
PSQCESHTATGSTTTTTTTATPTLQYGLENTHVNYQPQSGRPAVAAQLQS
THGGGHHPQHSSGSAGHRGQRSAAPPHSSHSSQPPQPPRASPTAHTYLPS
AVGHooooooooooooooooooooo
>C4
MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
LVSERDNNIQLRSPVVNIITTPPGNASGGGSKQQSHHQTNHHTSGRNHPG
HPGHPQDVSSGGSHSKHLRISSTSNGKHGKYSSMQQQLPQDEDAVDAAAT
MQQQHTGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKSSQPLQFSFTFYD
LDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTINVRLTVSPEGKS
KSQPVVPVPVAAGFSSSHASKLKKLPTGLAAMSKPLAGGGVGSGGATVLT
TSAGNRRQHRYRPRKLIKSDDEDDDSNSEKEKDAHTHTHSHTPAADQPSG
SGTKGTGKSHHHQAQSARYHQKNNSRAEQCCTEQNTPDNGHNTYENMLNL
KCCKPEVDQVDCPSHRQHHQSHQNHQMRQQDIYMKQATQRVKMLRRARKQ
KKTPSQCESHTATGSTTTTTTTATPTLQYELENTHVNYQPQSGRPAVAAQ
LQSTHGGSHHPQHSSGSASHRGQRSAAAPHSTQSSQPSQPPQPPRASPTA
HTYLPPAAGHooooooooooooooo
>C5
MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
LVSERDNNIQLRSPVVNIITTPPGNASGGGSKQQSQHQTSHHSSGRSHPG
QPGHPQDVSSGGSHSKHLRISSTSNGKHGKYSNMQQHLPQDEDVVDAAAT
MQQQHSGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKSSQPLQFSFTFYD
LDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTINVRLTVSPEGKS
KSQPVVPVPVAAGFSSSHASKLKKLPTGLAAMSKPLAGAGVGSGGATALT
TSAGNRRQHRYRPRKLIKSDDEDDDSNSEKEKDAHTHTHTHTHTPAAADQ
PSGSGTKATGKSHHHQAQSARYHQKNNSRAEQCCTEQNTPDNGHNTYENM
LNLKCCKPEVDQVDCPSHRQHHQSHQNHQMRQQDIYMKQATQRVKMLRRA
RKQKKTPSQCESHTATGSTTTTTTTATPTLQYGLENTHVNYQPQSGRPAV
AAQLQSTHGGPHHPQHSSSSASHRGQRSAAPPHSTQPSQPPQPPRASPTA
HTYLPPAVGHooooooooooooooo
>C6
MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
LVSERDNNIQLRSPVVNIITTPPGNASSGATKQQSHQHHQSHSQTHPHHH
HHASGRSHAAHPGHPQDASSGGSHSKHLRINSTSNGKHGKYSNMQQHLPQ
DEDVVDAAASVQQHAGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKSSQP
LQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTINVR
LTVSPEGKSKAQPVVPLPVPVPVATGFGSSHASKLKKLPSGLGGAVGSGG
ATALTTSAGNRRQHRYRPRKLIKSDDEDDDSNSEKDMATTATDQPSGSGA
RSGGKGHHHQAQATRYHQKNSSRAEQYCAELNAPDNGHNTYENMLNLKCC
KPEGDQADCPSHRQHHQLRQQDIYMKQATQRVKMLRRARKQKKTPSQCES
HTATGSTTTTTTTATPTLQYGLENTHANCQPQSGRPAIAAQLQSTYGGHH
HQHSSGHRGQRSAAATAQPQCPPQCQYQSQCQPPQPPRTSPTAHTHLPSA
AGHoooooooooooooooooooooo
>C7
MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
LVSERDNNIQLRSPVVNIITTPPGNASSGATKQSHQHHQSQSNPHHHHSS
GRSHPSQPGHPQDVSSGGSHSKHLRISSTSNGKHGKYSNTQQHLPQDEDV
VDAAAAVQQQHAGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKSSQPLQF
SFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTINVRLTV
SPEGKSKSQPVVPLPVPVPVAAGFGSSHASKLKKLPTGLAGGVGSGGTTS
AGNRRQHRYRPRKLIKSDDEDDDSNSEKEKDLATADQATGSGAKSGAKGH
HHQAQATRYHQKNSSRAEQCCAEQNTPDNGHNTYENMLNLKCCKPEGDQA
DCPSHLLHHQHHQNHQNHQLRQQDIYMKQATQRVKMLRRARKQKKTPSQC
ESHTATGSTTTTTTTTATPTLQYGLENTHVNCQPQSGRPAIAAQLQSTYG
GHHHHQHSSGHRGQRSAAPSQCQSQSQCQPPQPPRASPTAHTHLPPAAGH
ooooooooooooooooooooooooo
>C8
MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
LVSERDNNIQLRSPVVNIITTPPGNVSSGVSKQQQSHHQHHQTNPHHHHS
SGRSHPSHSGNPQDVSSSASHSKHLRISSTSNGKHGKYSNMQQQHLPQDE
DVVDAAASMQQQPQHSGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKSSQ
PLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTINV
RLTVSPEGKSKSQPVVAVPVPAGFSSSHASKLKKLPTGLAAMSKPLAAGG
VGSGGATALTTSAGNRRQHRYRPRKLIKSDDEDDDSNSEKEKDAAPTSEQ
ASGSGAKAGGKSHHQARYHHNQSQNQKNNSRAEQCCTDQNTPDNGHNTYE
NMLNLKCCKPESDQVDCPSHRQHHQLRQQDIYMKQATQRVKMLRRARKQK
KTPSQCESHTATGSTTTTTTTATPTLQYGLENPHVNCQPQSGRPAVAAQL
QSTYGGYHHHQHSSGTSSHRGQRSAAAAAASQPSQPPQPPRASPTAHTHL
PSAAGHooooooooooooooooooo
>C9
MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
LVSERDNNIQLRSPVVNIITTPPGNASSGAGKQQAHLHHPTNPHHHHAAG
RSHPSQPGHPQDVISGGSHSKHLRISSTNNGNGNGKHGKYSNMQHNVHLP
QDEDVVDAAASMQQQQHGGHAHSRHLHHHKEERIRLEEFTCDVSVEGGKS
SQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPHCGSKTI
NVRLTVSPEGKSKAQPVVPVPVAAGFGSSHASKLKKLPTGLAAMSKPLAG
AAPNAAGAGGGGSGGATALTTSAGNRRQHRYRPRKLIKSDDEDDDSNSEK
EKDPSAPSLEQPSGSGARKSHHQSRYSHGQKISSRAEQCCSEQHTPDNNA
HNTYENMLNLKCCKPESDQVDCPSHRQHQQQQHHLQHHQNHQMRQQDIYM
KQATQRVKMLRRARKQKKTPSQCESHTATGSTTTTTTTTATPTLQYGLEN
PHVNCQPQSGRPAVAAQLQSAHGGHHLHSSGTATAGHRGQRSTAAAAAAA
AVAPQPQPPRASPTTHTHLPPAAGH
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=9, Len=634
C1 MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
C2 MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
C3 MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
C4 MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
C5 MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
C6 MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
C7 MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
C8 MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
C9 MAGNIVKWWKHKILGGYKQFSVQECTTDSEELMYHQVRASSSCSAPPDLL
**************************************************
C1 LVSERDNNIQLRSPVVNIITTPPGNASGAGSKQQ----SHHQTN------
C2 LVSERDNNIQLRSPVVNIITTPPGNASGAGSKQQ----SHHQTN------
C3 LVSERDNNIQLRSPVVNIITTPPGNASGAGSKQQ----SHHQTN------
C4 LVSERDNNIQLRSPVVNIITTPPGNASGGGSKQQ----SHHQTN------
C5 LVSERDNNIQLRSPVVNIITTPPGNASGGGSKQQ----SQHQTS------
C6 LVSERDNNIQLRSPVVNIITTPPGNASSGATKQQSHQHHQSHSQTHPHHH
C7 LVSERDNNIQLRSPVVNIITTPPGNASSGATK-QSHQHHQSQSNP---HH
C8 LVSERDNNIQLRSPVVNIITTPPGNVSSGVSKQQQSHHQHHQTNP---HH
C9 LVSERDNNIQLRSPVVNIITTPPGNASSGAGKQQ--AHLHHPTNP---HH
*************************.*.. * * : :.
C1 HHSSGRSHPGHTAHPQDVSSGGSHSKHLRISSTSNG----KHGKYSNMQQ
C2 HHSSARSHPGHAVHPQDVSTGGSHSKHLRISSTSNG----KHGKYSNMQQ
C3 HHSSGRSHPGHAVHPQDVSSGGSHSKHLRISSTSNG----KHGKYSNMQQ
C4 HHTSGRNHPGHPGHPQDVSSGGSHSKHLRISSTSNG----KHGKYSSMQQ
C5 HHSSGRSHPGQPGHPQDVSSGGSHSKHLRISSTSNG----KHGKYSNMQQ
C6 HHASGRSHAAHPGHPQDASSGGSHSKHLRINSTSNG----KHGKYSNMQQ
C7 HHSSGRSHPSQPGHPQDVSSGGSHSKHLRISSTSNG----KHGKYSNTQQ
C8 HHSSGRSHPSHSGNPQDVSSSASHSKHLRISSTSNG----KHGKYSNMQQ
C9 HHAAGRSHPSQPGHPQDVISGGSHSKHLRISSTNNGNGNGKHGKYSNMQH
**::.*.*..:. :***. :..********.**.** ******. *:
C1 --QLPQDEDVVDAAATMQQQQ-HTGHAHSRHLHHHKEERIRLEEFTCDVS
C2 --QLPQDEDVVDAAATMQQQQQDTGHAHSRHLHHHKEERIRLEEFTCDVS
C3 --QLPQDEDVVDAAATMQQQQQHTGHAHSRHLHHHKEERIRLEEFTCDVS
C4 --QLPQDEDAVDAAATMQQQH--TGHAHSRHLHHHKEERIRLEEFTCDVS
C5 --HLPQDEDVVDAAATMQQQH--SGHAHSRHLHHHKEERIRLEEFTCDVS
C6 --HLPQDEDVVDAAASVQQ---HAGHAHSRHLHHHKEERIRLEEFTCDVS
C7 --HLPQDEDVVDAAAAVQQQ--HAGHAHSRHLHHHKEERIRLEEFTCDVS
C8 -QHLPQDEDVVDAAASMQQQPQHSGHAHSRHLHHHKEERIRLEEFTCDVS
C9 NVHLPQDEDVVDAAASMQQQ-QHGGHAHSRHLHHHKEERIRLEEFTCDVS
:******.*****::** **************************
C1 VEGGKSSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPH
C2 VEGGKSSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPH
C3 VEGGKSSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPH
C4 VEGGKSSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPH
C5 VEGGKSSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPH
C6 VEGGKSSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPH
C7 VEGGKSSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPH
C8 VEGGKSSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPH
C9 VEGGKSSQPLQFSFTFYDLDGHHGKITKDDIVGIVYTIYESIGKSVVVPH
**************************************************
C1 CGSKTINVRLTVSPEGKSKSQPVV----PVPVAAGFSSSHASKLKKLPTG
C2 CGSKTINVRLTVSPEGKSKSQPVV----PVPVAVGYSSSHASKLKKLPTG
C3 CGSKTINVRLTVSPEGKSKSQPVV----PVPVAAGFSSSHASKLKKLPTG
C4 CGSKTINVRLTVSPEGKSKSQPVV----PVPVAAGFSSSHASKLKKLPTG
C5 CGSKTINVRLTVSPEGKSKSQPVV----PVPVAAGFSSSHASKLKKLPTG
C6 CGSKTINVRLTVSPEGKSKAQPVVPLPVPVPVATGFGSSHASKLKKLPSG
C7 CGSKTINVRLTVSPEGKSKSQPVVPLPVPVPVAAGFGSSHASKLKKLPTG
C8 CGSKTINVRLTVSPEGKSKSQPVV----AVPVPAGFSSSHASKLKKLPTG
C9 CGSKTINVRLTVSPEGKSKAQPVV----PVPVAAGFGSSHASKLKKLPTG
*******************:**** .***..*:.***********:*
C1 LAAMSKPLAG--------GGVGSGGASALTTSAGNRRQHRYRPRKLIKSD
C2 LAAMSKPLAG--------GGVGSGGATALTTSAGNRRQHRYRPRKLIKSD
C3 LAAMSKPLAG--------GGVGSGGATALTTSAGNRRQHRYRPRKLIKSD
C4 LAAMSKPLAG--------GGVGSGGATVLTTSAGNRRQHRYRPRKLIKSD
C5 LAAMSKPLAG--------AGVGSGGATALTTSAGNRRQHRYRPRKLIKSD
C6 LG----------------GAVGSGGATALTTSAGNRRQHRYRPRKLIKSD
C7 LA----------------GGVGSGG----TTSAGNRRQHRYRPRKLIKSD
C8 LAAMSKPLAA--------GGVGSGGATALTTSAGNRRQHRYRPRKLIKSD
C9 LAAMSKPLAGAAPNAAGAGGGGSGGATALTTSAGNRRQHRYRPRKLIKSD
*. .. **** *********************
C1 DEDDDSNSEKEKDA-----AHAP---AADQPSGSGTKATGKSHHHQSQSA
C2 DEDDDSNSEKEKDA-----AHAP---AADQPSGSGTKASEKSHHHQAQSA
C3 DEDDDSNSEKEKDA-----AHAP---AADQPSGSGTKATGKSHHHQAQSA
C4 DEDDDSNSEKEKDAHTHTHSHTP---AADQPSGSGTKGTGKSHHHQAQSA
C5 DEDDDSNSEKEKDAHTHTHTHTHTPAAADQPSGSGTKATGKSHHHQAQSA
C6 DEDDDSNSEKDMATT-----------ATDQPSGSGARSGGKGHHHQAQAT
C7 DEDDDSNSEKEKDLA-----------TADQATGSGAKSGAKGHHHQAQAT
C8 DEDDDSNSEKEKD-------AAP---TSEQASGSGAKAGGKSHHQARYHH
C9 DEDDDSNSEKEKDP------SAP---SLEQPSGSGAR---KSHHQSRYSH
**********: : :*.:***:: *.**:
C1 R--YHQKNNSRAEQCCTEQNTPDN-GHNTYENMLNLKCCKPEVDQVDCPS
C2 R--YHQKNNSRAEQCCTEQNTADN-GHNTYENMLNLKCCKPEVDQVDCPS
C3 R--YHQKNNSRAEQCCTEQNTPDN-GHNTYENMLNLKCCKPEVDQVDCPS
C4 R--YHQKNNSRAEQCCTEQNTPDN-GHNTYENMLNLKCCKPEVDQVDCPS
C5 R--YHQKNNSRAEQCCTEQNTPDN-GHNTYENMLNLKCCKPEVDQVDCPS
C6 R--YHQKNSSRAEQYCAELNAPDN-GHNTYENMLNLKCCKPEGDQADCPS
C7 R--YHQKNSSRAEQCCAEQNTPDN-GHNTYENMLNLKCCKPEGDQADCPS
C8 NQSQNQKNNSRAEQCCTDQNTPDN-GHNTYENMLNLKCCKPESDQVDCPS
C9 G----QKISSRAEQCCSEQHTPDNNAHNTYENMLNLKCCKPESDQVDCPS
** .***** *:: ::.** .**************** **.****
C1 HRQHHQS------HPNHQMRQQDIYMKQATQRVKMLRRARKQKKTPSQCE
C2 HRQHHQS------HQNHQMRQQDIYMKQATQRVKMLRRARKQKKTPSQCE
C3 HRQHHQS------HQNHQMRQQDIYMKQATQRVKMLRRARKQKKTPSQCE
C4 HRQHHQS------HQNHQMRQQDIYMKQATQRVKMLRRARKQKKTPSQCE
C5 HRQHHQS------HQNHQMRQQDIYMKQATQRVKMLRRARKQKKTPSQCE
C6 HR------------QHHQLRQQDIYMKQATQRVKMLRRARKQKKTPSQCE
C7 HLLHHQHH---QNHQNHQLRQQDIYMKQATQRVKMLRRARKQKKTPSQCE
C8 HRQH------------HQLRQQDIYMKQATQRVKMLRRARKQKKTPSQCE
C9 HRQHQQQQHHLQHHQNHQMRQQDIYMKQATQRVKMLRRARKQKKTPSQCE
* **:*******************************
C1 SHTATGS-TTTTTTTATPTLQYGLENTHVNYQPQSGRPAVAAQLQSTHGG
C2 SHTATGS-TTTTTTTATPTLQYGLENTHVNYQPQSGRPAVAAQLQSTHGG
C3 SHTATGS-TTTTTTTATPTLQYGLENTHVNYQPQSGRPAVAAQLQSTHGG
C4 SHTATGS-TTTTTTTATPTLQYELENTHVNYQPQSGRPAVAAQLQSTHGG
C5 SHTATGS-TTTTTTTATPTLQYGLENTHVNYQPQSGRPAVAAQLQSTHGG
C6 SHTATGS-TTTTTTTATPTLQYGLENTHANCQPQSGRPAIAAQLQSTYGG
C7 SHTATGSTTTTTTTTATPTLQYGLENTHVNCQPQSGRPAIAAQLQSTYGG
C8 SHTATGS-TTTTTTTATPTLQYGLENPHVNCQPQSGRPAVAAQLQSTYGG
C9 SHTATGSTTTTTTTTATPTLQYGLENPHVNCQPQSGRPAVAAQLQSAHGG
******* ************** ***.*.* ********:******::**
C1 AHHPQHSSSSAGHRGQRSAAP------PHSSHS---SQPPQPPRASPTAH
C2 GHHPQHSSGSAGHRGQRSAAP------PHSSHS---SQPPQPPRASPTAH
C3 GHHPQHSSGSAGHRGQRSAAP------PHSSHS---SQPPQPPRASPTAH
C4 SHHPQHSSGSASHRGQRSAAA------PHSTQSSQPSQPPQPPRASPTAH
C5 PHHPQHSSSSASHRGQRSAAP------PHSTQ---PSQPPQPPRASPTAH
C6 -HHHQHSSG---HRGQRSAAATAQPQCPPQCQYQSQCQPPQPPRTSPTAH
C7 HHHHQHSSG---HRGQRSAA-------PSQCQSQSQCQPPQPPRASPTAH
C8 YHHHQHSSGTSSHRGQRSAAA------AAASQP--SQP-PQPPRASPTAH
C9 HHLHSSGTATAGHRGQRSTAA------AAAAAA--VAPQPQPPRASPTTH
* . .:. ******:* . *****:***:*
C1 TYLPSAVGHoooooooooooooooooooooo---
C2 TYLPSAVGHooooooooooooooooooooo----
C3 TYLPSAVGHooooooooooooooooooooo----
C4 TYLPPAAGHooooooooooooooo----------
C5 TYLPPAVGHooooooooooooooo----------
C6 THLPSAAGHoooooooooooooooooooooo---
C7 THLPPAAGHooooooooooooooooooooooooo
C8 THLPSAAGHooooooooooooooooooo------
C9 THLPPAAGH-------------------------
*:**.*.**
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log S [0]
-genepred_score S [0] nsd
-run_name S [0]
-mem_mode S [0] mem
-extend D [1] 1
-extend_mode S [0] very_fast_triplet
-max_n_pair D [0] 10
-seq_name_for_quadruplet S [0] all
-compact S [0] default
-clean S [0] no
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-do_normalise D [0] 1000
-template_file S [0]
-setenv S [0] 0
-template_mode S [0]
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-in S [0]
-seq S [0]
-aln S [0]
-method_limits S [0]
-method S [0]
-lib S [0]
-profile S [0]
-profile1 S [0]
-profile2 S [0]
-pdb S [0]
-relax_lib D [0] 1
-filter_lib D [0] 0
-shrink_lib D [0] 0
-out_lib W_F [0] no
-out_lib_mode S [0] primary
-lib_only D [0] 0
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-dpa FL [0] 0
-seq_source S [0] ANY
-cosmetic_penalty D [0] 0
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-gapext D [0] 0
-fgapopen D [0] 0
-fgapext D [0] 0
-nomatch D [0] 0
-newtree W_F [0] default
-tree W_F [0] NO
-usetree R_F [0]
-tree_mode S [0] nj
-distance_matrix_mode S [0] ktup
-distance_matrix_sim_mode S [0] idmat_sim1
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-outfile W_F [0] default
-maximise FL [1] 1
-output S [1] score_ascii html score_ascii
-len D [0] 0
-infile R_F [1] /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix S [0] default
-tg_mode D [0] 1
-profile_mode S [0] cw_profile_profile
-profile_comparison S [0] profile
-dp_mode S [0] linked_pair_wise
-ktuple D [0] 1
-ndiag D [0] 0
-diag_threshold D [0] 0
-diag_mode D [0] 0
-sim_matrix S [0] vasiliky
-transform S [0]
-extend_seq FL [0] 0
-outorder S [0] input
-inorder S [0] aligned
-seqnos S [0] off
-case S [0] keep
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-maxlen D [0] -1
-sample_dp D [0] 0
-weight S [0] default
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-scale D [0] 0
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-method_evaluate_mode S [0] default
-evaluate_mode S [1] t_coffee_fast
-get_type FL [0] 0
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-clean_threshold D [1] 1
-clean_iteration D [1] 1
-clean_evaluate_mode S [0] t_coffee_fast
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-prot_max_sim D [90] 90
-prot_min_cov D [40] 40
-pdb_type S [0] d
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-pdb_max_sim D [100] 100
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-blast W_F [0]
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-protein_db W_F [0] uniprot
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-msa_mode S [0] tree
-master S [0] no
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-clean_seq_name D [0] 0
-seq_to_keep S [0]
-dpa_master_aln S [0]
-dpa_maxnseq D [0] 0
-dpa_min_score1 D [0]
-dpa_min_score2 D [0]
-dpa_keep_tmpfile FL [0] 0
-dpa_debug D [0] 0
-multi_core S [0] templates_jobs_relax_msa_evaluate
-n_core D [0] 0
-max_n_proc D [0] 0
-lib_list S [0]
-prune_lib_mode S [0] 5
-tip S [0] none
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-proxy S [0] unset
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-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
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-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [61684]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [61684]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [61684]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [61684]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [61684]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 9 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C8 Length 575 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C9 Length 575 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/325/nkd-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [61684]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-o 