--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Sat Nov 12 04:44:08 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/2/Ac13E-PB/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/2/Ac13E-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/2/Ac13E-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/2/Ac13E-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -15963.44 -15977.93
2 -15963.45 -15976.34
--------------------------------------
TOTAL -15963.45 -15977.42
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/2/Ac13E-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/2/Ac13E-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/2/Ac13E-PB/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 1.034948 0.001893 0.950290 1.117222 1.034382 1242.11 1323.57 1.002
r(A<->C){all} 0.134464 0.000141 0.112629 0.159154 0.134278 762.87 887.17 1.000
r(A<->G){all} 0.294736 0.000317 0.260875 0.329645 0.294385 1020.14 1043.48 1.000
r(A<->T){all} 0.092979 0.000177 0.068600 0.120130 0.092457 1026.26 1057.69 1.001
r(C<->G){all} 0.079430 0.000053 0.066120 0.094237 0.079151 1055.53 1113.93 1.000
r(C<->T){all} 0.358470 0.000369 0.323551 0.398976 0.358259 832.94 839.53 1.001
r(G<->T){all} 0.039922 0.000047 0.026715 0.054066 0.039736 1054.77 1087.21 1.000
pi(A){all} 0.206397 0.000028 0.196523 0.217071 0.206203 925.20 979.93 1.000
pi(C){all} 0.302033 0.000034 0.291069 0.313275 0.302086 860.79 904.75 1.000
pi(G){all} 0.297804 0.000037 0.286127 0.309669 0.297551 869.34 969.88 1.000
pi(T){all} 0.193766 0.000024 0.183701 0.202980 0.193671 835.16 1075.33 1.000
alpha{1,2} 0.130618 0.000050 0.116602 0.143499 0.130604 1353.57 1402.40 1.000
alpha{3} 6.301102 1.507673 4.085601 8.735681 6.172245 1298.80 1399.90 1.000
pinvar{all} 0.368097 0.000382 0.328132 0.403576 0.368575 1305.06 1310.33 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -13952.39549
Model 2: PositiveSelection -13952.39549
Model 0: one-ratio -14186.843195
Model 3: discrete -13939.437458
Model 7: beta -13946.348518
Model 8: beta&w>1 -13939.599472
Model 0 vs 1 468.89540999999736
Model 2 vs 1 0.0
Model 8 vs 7 13.498092000001634
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_Ac13E-PB)
Pr(w>1) post mean +- SE for w
539 T 0.534 1.018 +- 0.538
665 A 0.653 1.168 +- 0.470
689 T 0.566 1.054 +- 0.530
695 S 0.650 1.164 +- 0.473
697 G 0.803 1.318 +- 0.377
698 H 0.859 1.372 +- 0.324
699 L 0.809 1.324 +- 0.373
842 E 0.573 1.028 +- 0.571
853 P 0.505 0.943 +- 0.590
1150 D 0.666 1.171 +- 0.481
1154 A 0.519 0.960 +- 0.587
1155 A 0.690 1.189 +- 0.481
1156 P 0.500 0.929 +- 0.597
1158 G 0.883 1.392 +- 0.307
1543 T 0.534 0.977 +- 0.585
1552 D 0.699 1.215 +- 0.448
1558 G 0.881 1.394 +- 0.296
1559 T 0.930 1.442 +- 0.219
1560 K 0.909 1.420 +- 0.260
1562 M 0.869 1.386 +- 0.303
1564 H 0.766 1.284 +- 0.403
1607 A 0.586 1.043 +- 0.568
1609 N 0.699 1.214 +- 0.451
1614 S 0.973* 1.479 +- 0.130
1618 L 0.899 1.413 +- 0.266
1626 I 0.943 1.452 +- 0.199
1633 T 0.568 1.020 +- 0.574
1637 S 0.672 1.145 +- 0.529
>C1
MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTVTSAVTALL
LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
SIAFEMVSHMVIGCSAIHGGPMHGGGGAAGGSGMEANGDPSNRILILRIM
AHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKMIHS
VMPPKVADMLLNEGGPSGLDAGGLPPESHYMRPRASNDVKSLFRPFHMHS
MENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCEKIS
TLGDCYYCVSGCPEPRADHAICCVEMGLGMIDAMRCFDAQRHEGVKMRVG
VHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETSSFL
GDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANATGSSLLLPG
AHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTSLSM
KMRKKSQSRDRDVERGIIHPAAAGIPPVIVVRERPKIIITTKSLPGSLDS
DEQPPVSPPLLPPANPPAAETRSKIKLKVWKIPRFLKRFEDLTNRSSCGG
SSSAGHLDKEREREREKEKEELHQHNQLNPEETLAFMDNQMQNGNGCGYQ
QLPVLVESNHRTQTLDIPAARPVLHHAATSTALASSVLRSPEAGVSGGGG
CCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCGRQSTGGVNG
AGPAGVGAEGRAGTSQTAPPVEQSPLPRPRASTLATGRPTPNSLEPGPSS
TSPCCLPAPGNSVGGGGIFPPTHSRQSSICPSATSRKDSGIKSNSRRSSI
QQQIYALNQTAISQHRVSGYFTSSTSSISNLGEVQGLGLPLAVQPPPPLL
MPACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQRSYLVKPPLRKF
SLYFKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNTYIDIFVGIAVY
LCISVSLFLMTQNTVSPSFRLWVTLFSCFTGIQVFALFLFTRQMCRRQSG
SNVSNRFRSKSTTSEDLERDERGAAPGGRPHFESCADRIFEAISSWYPWH
ICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHYGFLIFVCIVHFCNFTQL
NCWVRNVLAFLAALCFIGIAVSQLMVYSHNRSDQQQDQEASNFIQEIKWF
QDYHVEIYLDLLLILVLVWFLNREFEIGYRLTFYGNAVANQDKVRVQNMK
NQADMLLHNIIPKHVAEHLKNTAKYSENHHNIAIIFASIVNFNEMYDESY
LGGKEFLRVLNELIGDFDELLSRPEFRAVEKIKTIGSTFMAASGLDPSHR
GTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNLILRIGMNIGDVTAGVIG
TSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKDCLPFLTNRYEFEPRGSV
YVKGKDHMEVFLYTTRRDNPLDDDEADKVEQLGTKKMEHEGRDEDVVQGE
QQAEDKDEEEEEEEEDDDLHSSETTTLFKSQESLQANGGSHLAPNAAATS
HTHTITLTNNNNHNSSNINNNIATSNTTTTANNNSMPVEToooooo
>C2
MPPGVLANDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTVTSAVTALL
LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
SIAFEMVSHMVIGCSAIHGGPMHGGSGGSGGAGGSGVEASGDPSNRILIL
RIMAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKM
IHSVMPPKVADMLLNEGGPSGLDAGGLPPESHYMRPRASNDVKSLFRPFH
MHSMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCE
KISTLGDCYYCVSGCPEPRGDHAICCVEMGLGMIDAMRCFDAQRHEGVKM
RVGVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETS
SFLGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANVTGSSLL
LPGAHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTS
LSMKMRKKSQSRDRDVERGIIHPAAAGVPPVIVVRERPKIIITTKSLPGS
LDSDEQPPVTPPLLPPANPPTAETRSRIKLKVWKIPRFLKRFEDLSNRSS
SCSAAHLDKEREREREREKEKEELHHQNQLNPEETLAFMDNQMQNGNGCG
YQQLPVLVESNHRTQTLDIPAARPVLHHAATSTALASSVLRSPEAGVSGG
GGCCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCGRQSTGGV
NGAGGAAGAGAEGRAGTSQAAPPVEQSPLPRPRASTLATGRPTPNSLEPG
TSSTSPCCLPAPGNSGGGGGIFPPTHSRQSSICPSATSRKDSGIKSNSRR
SSIQQQIYALNQTAINQHRVSGYFTSSTSSISNLGEVQGLGLPLAVQPPP
PLLMPACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQRSYLVKPPL
RKFSLYFKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNTYIDIFVGI
AVYLCISISLFLMTQNTVSPSFRLWVTLFSCFTGIQVFALFLFTRQMCRR
QSGSNVSNRFRSKSTTSEDLEREERGGGPVGRPHFESCADRIFEAISSWY
PWHICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHYGFLIFVCIVHFCNF
TQLNCWVRNVLAFLAALCFIGIAVSQLMVYSHNRSDQQQDQEASNFIQEI
KWFQDYHVEIYLDLLLILVLVWFLNREFEIGYRLTFYGNAVANQDKVRVQ
NMKNQADMLLHNIIPKHVAEHLKNTAKYSENHHNIAIIFASIVNFNEMYD
ESYLGGKEFLRVLNELIGDFDELLSRPEFRAVEKIKTIGSTFMAASGLDP
SHRGTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNLILRIGMNIGDVTAG
VIGTSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKDCLPFLANRYDFEPR
GSVYVKGKDHMEVFLYTTRRDNPLDDDEAEKVEQLAAKKTKECEERGNED
VVQNEQQEEEDDEEEEEEEDDLHSSETTTLFKSQESLQANGGSHLAPTAT
ATSTATTHSHTITLTNNNNHNSSNNNNIGTSTTTTTANNNSMPVET
>C3
MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTVTSAVTALL
LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
SIAFEMVSHMVIGCSAIHGGAMHGGNAAGGGSGMEANGDPSNKILILRIM
AHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKMIHS
VMPPKVADMLLNEGGPSGLDSGGLPPESHYMRPRASNDVKSLFRPFHMHS
MENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCEKIS
TLGDCYYCVSGCPEPRVDHAICCVEMGLGMIDAMRCFDAQRHEGVKMRVG
VHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETSSFL
GDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANAIGSSLLLPG
AHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTSLSM
KLRKKSQSRERDVERGIIHPAAAGVPPVIVVRERPKIIITTKSLPGSLDS
DEQPPVSPPLPPPANPPAIETRSKIKLKVWKVPRFFKRGFEDLSGRNCTS
SSSSSGHHQEKEREREREKEELHHQNQLNPEETLAFMDNQMQNGNGCGYQ
QLPVLVESSIHRTQTLDIPPARPVLHHAATSTALASSVLRSPEAGGSGGG
CCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCGRQSTGGGNG
AGAAAGAGGAGSSQTAPTVEQSPLPRPRASTLATGRPTPNSLEPGTSSTS
PCCLPAPGNSGGGIFPPSHSRQSSICPSATSRKDSGIKSNSRRSSIQQQI
YALNQSAISQHRVSGYFTSSTSSISNLGEVQGLGLPLAVQPPPPALLMPA
CSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQRSYLVKPPLRKFSLY
FKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNTYIDIFVGIAVYLCI
SVSLFLMTQNTVTPSFRLWVTLFSCFTGIQVFALFLFTRQMCRRQSGGSA
GNRFRSKSTTSEDLEREERGAGGAGGGARGRPHFESCADRIFEAISSWYP
WHICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHYGFLIFVCIVHFCNFT
QLNCWVRNVLAFLAALCFIGIAVSQLMVYSHNRGDQQDQETASNFTEEIK
WFQDYHVEIYLDLLLILVLVWFLNREFEIGYRLTFYGNAVANQDKVRVQN
MKNQADMLLHNIIPKHVAEHLKNTAKYSENHHNIAIIFASIVNFNEMYDE
SYLGGKEFLRVLNELIGDFDELLSRPEFRAVEKIKTIGSTFMAASGLDPS
HRGTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNLILRIGMNIGDVTAGV
IGTSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKDCLPFLTNRYEFEPRG
SVYVKGKDHMEVFLFTGRREKPLEDKADDELERLESKKQEYEEQDEVAVQ
EEEDDEDEDEEDDLHSSETTTLFKSQESLQANGGSHLAPSNAVNHSSMGN
NNNNSNANNNVNNINTSTTTTANNNSMPVETooooooooooooooo
>C4
MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTVTSAVTALL
LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
SIAFEMVSHMVIGCSAIHGGAMHGGNGGDGESGSGMAANGDPSNKILILR
IMAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKMI
HSVMPPKVADMLLNEGGPSGLDSGGMPPESHYMRPRASNDVKSLFRPFHM
HSMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCEK
ISTLGDCYYCVSGCPEPRVDHAICCVEMGLGMIDAMRCFDAQRHEGVKMR
VGVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETSS
FLGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANAIGSSLLL
PGAHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTSL
SMKLRKKSQSRDRDVERGIIHPAAAGVPPVIVVRERPKIIITTKSLPGSL
DSDEQPPASPPLPPPANPPAVEMRSKIKLKVWKVPRFFKRGFEDLSGKNC
SGSSSSTGQEKERDREREREKEELHHQNQLNPEETLAFMDNQMQNGNGCG
YQQLPVLVESSIHRTQTLDIPPARPVLHHAATSTALASSVLRSPEAGGSG
GGCCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCGRQSTGGG
NGAGGAGGAGGAGTSQAAPTVEQSPLPRPRASTLATGRPTPNSLEPGTSS
TSPCCLPAPSNSGGGIFPPTHSRQSSICPSATSRKDSGIKSNSRRSSIQQ
QIYALNQSAISQHRVSGYFTSSTSSISNLGEVQGLGLPLAVQPPPPALLM
PACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQRSYLVKPPLRKFS
LYFKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNTYIDIFVGIAVYL
CISVSLFLMTQNTVTPSFRLWVTLFSCFTAIQVFALFLFTRQMCRRQSGG
NAGNRFRSKSTTSEDLEREERGGGGARGRPHFESCADRIFEAISSWYPWH
ICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHYGFLIFVCIVHFCNFTQL
NCWVRNVLAFLAALCFIGIAVSQLMVYSHNRSDQQDQEAASNFIQEIKWF
QDYHVEIYLDLLLILVLVWFLNREFEIGYRLTFYGNAVANQDKVRVQNMK
NQADMLLHNIIPKHVAEHLKNTAKYSENHHNIAIIFASIVNFNEMYDESY
LGGKEFLRVLNELIGDFDELLSRPEFRAVEKIKTIGSTFMAASGLDPSHR
GTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNLILRIGMNIGDVTAGVIG
TSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKECLPFLTKRYEFEPRGSV
YVKGKDHMEVFLFTGRRERPLDDKANDELERSLVAKKLEYEEQDEVAVRE
EEDGDEEEEDEEEEDDLHSSETTTLFKSQESLQANGGSHLTPTTAITHTI
SSNNNNHSNTNNNVNNLNTSTTTTTTTTTTTAANNNAMPMEToooo
>C5
MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLVWCLYF
VVDGGSEDFWRPISSSFSMLSLVTIMAMCFTHWDLYREHRTVTSAVTALM
LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
SIAFEMVSHMVIGCSAIHGGAMHSVGGGGSGDGVSGIETNGDPSNKILIL
RIMAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKM
IHSVMPPKVADMLLNEGGTSGLDSGGLPPESHYMRPRASNDVKSLFRPFH
MHSMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCE
KISTLGDCYYCVSGCPEPRADHAICCVEMGLGMIDAMRCFDAQRHEGVKM
RVGVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETS
SFLGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANAAGSSLL
LPGAHGTSLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTS
LSMKLRKKSQSRERDVERGIIHPAAAGVPPVIVVRERPKIIITTKSLPGS
LDSDEQPAVSPPLPPVNPPATETRSKIKLKVWKVPRFLRRFEDLASRNSG
GSSSSTTAHQEKEREREKEKEELHQQNQLNPEETLAFMDNQMQNGNGCGY
QQLPVLVESNHRTQTLDIPPARPVLHHAATSTALASSVLRSPEAGVSGGC
CSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCGRQSTGGGNGA
AGGGAGTSQAAPAVEQSPLPRPRASTLATGRPTPNSLEPGTSSTSPCCLP
APGNSGGGIFPPTHSRQSSICPSATSRKDSGIKSNSRRSSIQQQIYALNQ
SAISQHRVSGYFTSSTSSISNLGEVQGLGLPLAVQPPPPLLMPACSSQMA
DPLAACLQQLRKQSDLQLIRCVRDNARSQRSYLVKPPLRKFSLYFQSRQL
ERDFRSKAHRFGAENETEGPPTLATPRYNTYIDIFVGIAVYLCISVSLFL
MTQNTVTPSFRLWVTLFSCFTGIQVFALFLFTRQMCRRQSGSNNVSNRFR
SKSTTSEDLEREDRERTPSARGPHFESCADRIFEAISSWYPWHICLAVLM
AMPVLLIIANFLLLDLEQLEAFEYHYGFLIFVCIVHFCNFTQLNCWVRNV
LAFLAALCFIGIAVSQLMVYSHNRSDQQDQEASNFIQEIKWFQDYHVEIY
LDLLLILVLVWFLNREFEIGYRLTFYGNAVANQDKVRVQNMKNQADMLLH
NIIPKHVAEHLKNTAKYSENHHNIAIIFASIVNFNEMYDESYLGGKEFLR
VLNELIGDFDELLSRPEFRSVEKIKTIGSTFMAASGLDPSHRGTGDEHIH
TLMEFSIAMQEVVDAFNKDLLEFNLILRIGMNIGDVTAGVIGTSKLYYDI
WGDAVNVASRMDSTGLPNRIQVGKDCLPFLTNRYEFEPRGSVYVKGKDHM
EVFLYTGRREKPLDTPDEDADKLGQLETKNQEYVEQDEDDDGEEEEEEEE
DEDEDEDDLHSSETTTLFKSQESLQANGGSHLTPIATISLTAGNNHNNNN
IGSSNSSSSTTAATTTTTTTAATTNNNSMPVETooooooooooooo
>C6
MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTATSAVTALL
LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
SIAFEMVSHMVIGCSAIHGGAMHGGGGSAESGSGMAANGDPSNKILILRI
MAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKMIH
SVMPPKVADMLLNEGGPSGLDSGGLPPESHYMRPRASNDVKSLFRPFHMH
SMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCEKI
STLGDCYYCVSGCPEPRADHAICCVEMGLGMIDAMRCFDAQRHEGVKMRV
GVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETSSF
LGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPNNAAGSTLLLP
GTHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTSLS
MKLRKKSQSRERDVERGIIHPAAAGIPPVIVVRERPKIIITTKSLPGSLD
SDEQPPVTPPPPRPNPPASEARSKIKLKVWKVPRFLKRFEDLAGRNSNCS
SSATISTHQDKEKERDREREREKEELHHQNQLNPEETLAFMDNQMQNGNG
CGYQQLPVLVESSHRTQTLDIPPARPVLHHAATSTALASSVLRSPEAGVS
GGGCCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCGRQSTGG
GAGNGGGGGGGASTSQAAPTVEQSPVPRPRASTLATGRPTPNTLEPGPST
TSPCCLPAPGNSGGGGIFPPTHSRQSSICPSATSRKDSGIKSNSRRSSIQ
QQIYALNQSAISQHRVSGYFTSSTSSISNLGEVQGLGLPLAVQPPPPALL
MPACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQRSYLVKPPLRRF
SLYFKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNTYIDIFVGIAVY
LCISVSLFLMTQNTVTPSFRLWVTLFSCFTGIQVFALFLFTRQMCRRQSS
GNVSHRFRSKSTTSEDLERSEERGAGAPGPHFESCADRIFEAISSWYPWH
ICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHYGFLIFVCIVHFCNFTQL
NCWVRNVLAFLAALCFIGIAVSQLMVYSHNRGDQQDQEASNFIQEIKWFQ
DYHVEIYLDLLLILVLVWFLNREFEIGYRLTFYGNAVANQDKVRVQNMKN
QADMLLHNIIPKHVAEHLKNTAKYSENHHNIAIIFASIVNFNEMYDESYL
GGKEFLRVLNELIGDFDELLSRPEFRAVEKIKTIGSTFMAASGLDPSHRG
TGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNLILRIGMNIGDVTAGVIGT
SKLYYDIWGDAVNVASRMDSTGLPNRIQVGKDCLPFFTNRYEFEPRGSVY
VKGKDHMEVFLYTGRREKPLESMEQQQLLLDEDKLDPLEQPGKLEYEEQD
EDEEEDEEEEEEEEEDDLHSSETTTLFKSHESLQANGGNHLTPANGIATT
ITLTNNNNNNHNMATTTNNNNAMPVETooooooooooooooooooo
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=6, Len=1746
C1 MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
C2 MPPGVLANDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
C3 MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
C4 MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
C5 MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
C6 MPPGVLVNDSRANSTDDIQIALAPHIQTYLSQTGRRHSCCSVMLPVAFER
******.*******************************************
C1 AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
C2 AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
C3 AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
C4 AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
C5 AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLVWCLYF
C6 AAAKSWLDPKFDSPVLEEQYQASVFPHVRMRYRFTLSYILLCSLMWCLYF
********************************************:*****
C1 VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTVTSAVTALL
C2 VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTVTSAVTALL
C3 VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTVTSAVTALL
C4 VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTVTSAVTALL
C5 VVDGGSEDFWRPISSSFSMLSLVTIMAMCFTHWDLYREHRTVTSAVTALM
C6 VVDGGSEDFWRPISSSFSMLSLVTIMALCFTHWDLYREHRTATSAVTALL
***************************:*************.*******:
C1 LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
C2 LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
C3 LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
C4 LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
C5 LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
C6 LCGASLAFLTYTGRAFSPLGHFAICLEIVLLIYTALPMPLWLGASTAISY
**************************************************
C1 SIAFEMVSHMVIGCSAIHGGPMHGGGG---AAGGSGMEANGDPSNRILIL
C2 SIAFEMVSHMVIGCSAIHGGPMHGGSGGSGGAGGSGVEASGDPSNRILIL
C3 SIAFEMVSHMVIGCSAIHGGAMHGGNAA-GG--GSGMEANGDPSNKILIL
C4 SIAFEMVSHMVIGCSAIHGGAMHGGNGG-DGESGSGMAANGDPSNKILIL
C5 SIAFEMVSHMVIGCSAIHGGAMHSVGGGGSGDGVSGIETNGDPSNKILIL
C6 SIAFEMVSHMVIGCSAIHGGAMHGG-GG-SAESGSGMAANGDPSNKILIL
********************.**. . . **: :.*****:****
C1 RIMAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKM
C2 RIMAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKM
C3 RIMAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKM
C4 RIMAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKM
C5 RIMAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKM
C6 RIMAHLSVHLVGVHVLIMNLVRMRGTFMKVGQNLLVRRQLEMEKQLKEKM
**************************************************
C1 IHSVMPPKVADMLLNEGGPSGLDAGGLPPESHYMRPRASNDVKSLFRPFH
C2 IHSVMPPKVADMLLNEGGPSGLDAGGLPPESHYMRPRASNDVKSLFRPFH
C3 IHSVMPPKVADMLLNEGGPSGLDSGGLPPESHYMRPRASNDVKSLFRPFH
C4 IHSVMPPKVADMLLNEGGPSGLDSGGMPPESHYMRPRASNDVKSLFRPFH
C5 IHSVMPPKVADMLLNEGGTSGLDSGGLPPESHYMRPRASNDVKSLFRPFH
C6 IHSVMPPKVADMLLNEGGPSGLDSGGLPPESHYMRPRASNDVKSLFRPFH
******************.****:**:***********************
C1 MHSMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCE
C2 MHSMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCE
C3 MHSMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCE
C4 MHSMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCE
C5 MHSMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCE
C6 MHSMENVSILFADIVGFTRMSSTKTAEQLVEILNDLFERFDDLCSLSGCE
**************************************************
C1 KISTLGDCYYCVSGCPEPRADHAICCVEMGLGMIDAMRCFDAQRHEGVKM
C2 KISTLGDCYYCVSGCPEPRGDHAICCVEMGLGMIDAMRCFDAQRHEGVKM
C3 KISTLGDCYYCVSGCPEPRVDHAICCVEMGLGMIDAMRCFDAQRHEGVKM
C4 KISTLGDCYYCVSGCPEPRVDHAICCVEMGLGMIDAMRCFDAQRHEGVKM
C5 KISTLGDCYYCVSGCPEPRADHAICCVEMGLGMIDAMRCFDAQRHEGVKM
C6 KISTLGDCYYCVSGCPEPRADHAICCVEMGLGMIDAMRCFDAQRHEGVKM
******************* ******************************
C1 RVGVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETS
C2 RVGVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETS
C3 RVGVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETS
C4 RVGVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETS
C5 RVGVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETS
C6 RVGVHTGTVLCGIVGTRRVKFDVWSNDVSLANKMESSGKPEQVHISQETS
**************************************************
C1 SFLGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANATGSSLL
C2 SFLGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANVTGSSLL
C3 SFLGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANAIGSSLL
C4 SFLGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANAIGSSLL
C5 SFLGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPANAAGSSLL
C6 SFLGDAYYLEEGEEVFGHRTYFVVGRRRDFTRTNSLSPSMPNNAAGSTLL
***************************************** *. **:**
C1 LPGAHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTS
C2 LPGAHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTS
C3 LPGAHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTS
C4 LPGAHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTS
C5 LPGAHGTSLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTS
C6 LPGTHGASLSQSATNVSAVQPNVPPASPVGQLSSSLNPSPVLSMRPRLTS
***:**:*******************************************
C1 LSMKMRKKSQSRDRDVERGIIHPAAAGIPPVIVVRERPKIIITTKSLPGS
C2 LSMKMRKKSQSRDRDVERGIIHPAAAGVPPVIVVRERPKIIITTKSLPGS
C3 LSMKLRKKSQSRERDVERGIIHPAAAGVPPVIVVRERPKIIITTKSLPGS
C4 LSMKLRKKSQSRDRDVERGIIHPAAAGVPPVIVVRERPKIIITTKSLPGS
C5 LSMKLRKKSQSRERDVERGIIHPAAAGVPPVIVVRERPKIIITTKSLPGS
C6 LSMKLRKKSQSRERDVERGIIHPAAAGIPPVIVVRERPKIIITTKSLPGS
****:*******:**************:**********************
C1 LDSDEQPPVSPPLLPPANPPAAETRSKIKLKVWKIPRFLKR-FEDLTNRS
C2 LDSDEQPPVTPPLLPPANPPTAETRSRIKLKVWKIPRFLKR-FEDLSNRS
C3 LDSDEQPPVSPPLPPPANPPAIETRSKIKLKVWKVPRFFKRGFEDLSGRN
C4 LDSDEQPPASPPLPPPANPPAVEMRSKIKLKVWKVPRFFKRGFEDLSGKN
C5 LDSDEQPAVSPP-LPPVNPPATETRSKIKLKVWKVPRFLRR-FEDLASRN
C6 LDSDEQPPVTPP-PPRPNPPASEARSKIKLKVWKVPRFLKR-FEDLAGRN
*******..:** * ***: * **:*******:***::* ****:.:.
C1 SCGGSSSAGHLD--KERERERE--KEKEELHQHNQLNPEETLAFMDNQMQ
C2 S---SCSAAHLD--KEREREREREKEKEELHHQNQLNPEETLAFMDNQMQ
C3 --CTSSSSSSGH---HQEKEREREREKEELHHQNQLNPEETLAFMDNQMQ
C4 --CSGSSSSTGQ---EKERDREREREKEELHHQNQLNPEETLAFMDNQMQ
C5 S-GGSSSSTTAH--QEKERERE--KEKEELHQQNQLNPEETLAFMDNQMQ
C6 SNCSSSATISTHQDKEKERDREREREKEELHHQNQLNPEETLAFMDNQMQ
..:: . .:*::** :******::*****************
C1 NGNGCGYQQLPVLVESN-HRTQTLDIPAARPVLHHAATSTALASSVLRSP
C2 NGNGCGYQQLPVLVESN-HRTQTLDIPAARPVLHHAATSTALASSVLRSP
C3 NGNGCGYQQLPVLVESSIHRTQTLDIPPARPVLHHAATSTALASSVLRSP
C4 NGNGCGYQQLPVLVESSIHRTQTLDIPPARPVLHHAATSTALASSVLRSP
C5 NGNGCGYQQLPVLVESN-HRTQTLDIPPARPVLHHAATSTALASSVLRSP
C6 NGNGCGYQQLPVLVESS-HRTQTLDIPPARPVLHHAATSTALASSVLRSP
****************. *********.**********************
C1 EAGVSGGGGCCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCG
C2 EAGVSGGGGCCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCG
C3 EAGGSGGG-CCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCG
C4 EAGGSGGG-CCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCG
C5 EAGVSGG--CCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCG
C6 EAGVSGGG-CCSPGQYSMYDDIIDVRSYISQSRSDISPFGRSGSYRSQCG
*** *** *****************************************
C1 RQSTGGVNGAG-PAGVGAEGRAGTSQTAPPVEQSPLPRPRASTLATGRPT
C2 RQSTGGVNGAGGAAGAGAEGRAGTSQAAPPVEQSPLPRPRASTLATGRPT
C3 RQSTGGGNGAGA---AAGAGGAGSSQTAPTVEQSPLPRPRASTLATGRPT
C4 RQSTGGGNGAGG---AGGAGGAGTSQAAPTVEQSPLPRPRASTLATGRPT
C5 RQSTGGGNGAA-------GGGAGTSQAAPAVEQSPLPRPRASTLATGRPT
C6 RQSTGGGAGNG----GGGGGGASTSQAAPTVEQSPVPRPRASTLATGRPT
****** * . * *.:**:**.*****:**************
C1 PNSLEPGPSSTSPCCLPAPGNSVGGGGIFPPTHSRQSSICPSATSRKDSG
C2 PNSLEPGTSSTSPCCLPAPGNSGGGGGIFPPTHSRQSSICPSATSRKDSG
C3 PNSLEPGTSSTSPCCLPAPGNS-GGG-IFPPSHSRQSSICPSATSRKDSG
C4 PNSLEPGTSSTSPCCLPAPSNS-GGG-IFPPTHSRQSSICPSATSRKDSG
C5 PNSLEPGTSSTSPCCLPAPGNS--GGGIFPPTHSRQSSICPSATSRKDSG
C6 PNTLEPGPSTTSPCCLPAPGNS-GGGGIFPPTHSRQSSICPSATSRKDSG
**:****.*:*********.** ** ****:******************
C1 IKSNSRRSSIQQQIYALNQTAISQHRVSGYFTSSTSSISNLGEVQGLGLP
C2 IKSNSRRSSIQQQIYALNQTAINQHRVSGYFTSSTSSISNLGEVQGLGLP
C3 IKSNSRRSSIQQQIYALNQSAISQHRVSGYFTSSTSSISNLGEVQGLGLP
C4 IKSNSRRSSIQQQIYALNQSAISQHRVSGYFTSSTSSISNLGEVQGLGLP
C5 IKSNSRRSSIQQQIYALNQSAISQHRVSGYFTSSTSSISNLGEVQGLGLP
C6 IKSNSRRSSIQQQIYALNQSAISQHRVSGYFTSSTSSISNLGEVQGLGLP
*******************:**.***************************
C1 LAVQPPPP-LLMPACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQR
C2 LAVQPPPP-LLMPACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQR
C3 LAVQPPPPALLMPACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQR
C4 LAVQPPPPALLMPACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQR
C5 LAVQPPPP-LLMPACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQR
C6 LAVQPPPPALLMPACSSQMADPLAACLQQLRKQSDLQLIRCVRDNARSQR
******** *****************************************
C1 SYLVKPPLRKFSLYFKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNT
C2 SYLVKPPLRKFSLYFKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNT
C3 SYLVKPPLRKFSLYFKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNT
C4 SYLVKPPLRKFSLYFKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNT
C5 SYLVKPPLRKFSLYFQSRQLERDFRSKAHRFGAENETEGPPTLATPRYNT
C6 SYLVKPPLRRFSLYFKSRQLERDFRSKAHRFGAENETEGPPTLATPRYNT
*********:*****:**********************************
C1 YIDIFVGIAVYLCISVSLFLMTQNTVSPSFRLWVTLFSCFTGIQVFALFL
C2 YIDIFVGIAVYLCISISLFLMTQNTVSPSFRLWVTLFSCFTGIQVFALFL
C3 YIDIFVGIAVYLCISVSLFLMTQNTVTPSFRLWVTLFSCFTGIQVFALFL
C4 YIDIFVGIAVYLCISVSLFLMTQNTVTPSFRLWVTLFSCFTAIQVFALFL
C5 YIDIFVGIAVYLCISVSLFLMTQNTVTPSFRLWVTLFSCFTGIQVFALFL
C6 YIDIFVGIAVYLCISVSLFLMTQNTVTPSFRLWVTLFSCFTGIQVFALFL
***************:**********:**************.********
C1 FTRQMCRRQSGSN-VSNRFRSKSTTSEDLERDERG----AAPGGR-PHFE
C2 FTRQMCRRQSGSN-VSNRFRSKSTTSEDLEREERG----GGPVGR-PHFE
C3 FTRQMCRRQSGGS-AGNRFRSKSTTSEDLEREERGAGGAGGGARGRPHFE
C4 FTRQMCRRQSGGN-AGNRFRSKSTTSEDLEREERG----GGGARGRPHFE
C5 FTRQMCRRQSGSNNVSNRFRSKSTTSEDLEREDRE----RTPSARGPHFE
C6 FTRQMCRRQSSGN-VSHRFRSKSTTSEDLERSEER----GAGAPG-PHFE
**********... ..:**************.:. ****
C1 SCADRIFEAISSWYPWHICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHY
C2 SCADRIFEAISSWYPWHICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHY
C3 SCADRIFEAISSWYPWHICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHY
C4 SCADRIFEAISSWYPWHICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHY
C5 SCADRIFEAISSWYPWHICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHY
C6 SCADRIFEAISSWYPWHICLAVLMAMPVLLIIANFLLLDLEQLEAFEYHY
**************************************************
C1 GFLIFVCIVHFCNFTQLNCWVRNVLAFLAALCFIGIAVSQLMVYSHNRSD
C2 GFLIFVCIVHFCNFTQLNCWVRNVLAFLAALCFIGIAVSQLMVYSHNRSD
C3 GFLIFVCIVHFCNFTQLNCWVRNVLAFLAALCFIGIAVSQLMVYSHNRGD
C4 GFLIFVCIVHFCNFTQLNCWVRNVLAFLAALCFIGIAVSQLMVYSHNRSD
C5 GFLIFVCIVHFCNFTQLNCWVRNVLAFLAALCFIGIAVSQLMVYSHNRSD
C6 GFLIFVCIVHFCNFTQLNCWVRNVLAFLAALCFIGIAVSQLMVYSHNRGD
************************************************.*
C1 QQQDQEASNFIQEIKWFQDYHVEIYLDLLLILVLVWFLNREFEIGYRLTF
C2 QQQDQEASNFIQEIKWFQDYHVEIYLDLLLILVLVWFLNREFEIGYRLTF
C3 QQDQETASNFTEEIKWFQDYHVEIYLDLLLILVLVWFLNREFEIGYRLTF
C4 QQDQEAASNFIQEIKWFQDYHVEIYLDLLLILVLVWFLNREFEIGYRLTF
C5 QQ-DQEASNFIQEIKWFQDYHVEIYLDLLLILVLVWFLNREFEIGYRLTF
C6 QQDQE-ASNFIQEIKWFQDYHVEIYLDLLLILVLVWFLNREFEIGYRLTF
** :: **** :**************************************
C1 YGNAVANQDKVRVQNMKNQADMLLHNIIPKHVAEHLKNTAKYSENHHNIA
C2 YGNAVANQDKVRVQNMKNQADMLLHNIIPKHVAEHLKNTAKYSENHHNIA
C3 YGNAVANQDKVRVQNMKNQADMLLHNIIPKHVAEHLKNTAKYSENHHNIA
C4 YGNAVANQDKVRVQNMKNQADMLLHNIIPKHVAEHLKNTAKYSENHHNIA
C5 YGNAVANQDKVRVQNMKNQADMLLHNIIPKHVAEHLKNTAKYSENHHNIA
C6 YGNAVANQDKVRVQNMKNQADMLLHNIIPKHVAEHLKNTAKYSENHHNIA
**************************************************
C1 IIFASIVNFNEMYDESYLGGKEFLRVLNELIGDFDELLSRPEFRAVEKIK
C2 IIFASIVNFNEMYDESYLGGKEFLRVLNELIGDFDELLSRPEFRAVEKIK
C3 IIFASIVNFNEMYDESYLGGKEFLRVLNELIGDFDELLSRPEFRAVEKIK
C4 IIFASIVNFNEMYDESYLGGKEFLRVLNELIGDFDELLSRPEFRAVEKIK
C5 IIFASIVNFNEMYDESYLGGKEFLRVLNELIGDFDELLSRPEFRSVEKIK
C6 IIFASIVNFNEMYDESYLGGKEFLRVLNELIGDFDELLSRPEFRAVEKIK
********************************************:*****
C1 TIGSTFMAASGLDPSHRGTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNL
C2 TIGSTFMAASGLDPSHRGTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNL
C3 TIGSTFMAASGLDPSHRGTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNL
C4 TIGSTFMAASGLDPSHRGTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNL
C5 TIGSTFMAASGLDPSHRGTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNL
C6 TIGSTFMAASGLDPSHRGTGDEHIHTLMEFSIAMQEVVDAFNKDLLEFNL
**************************************************
C1 ILRIGMNIGDVTAGVIGTSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKD
C2 ILRIGMNIGDVTAGVIGTSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKD
C3 ILRIGMNIGDVTAGVIGTSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKD
C4 ILRIGMNIGDVTAGVIGTSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKE
C5 ILRIGMNIGDVTAGVIGTSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKD
C6 ILRIGMNIGDVTAGVIGTSKLYYDIWGDAVNVASRMDSTGLPNRIQVGKD
*************************************************:
C1 CLPFLTNRYEFEPRGSVYVKGKDHMEVFLYTTRRDNPLD--DDE-----A
C2 CLPFLANRYDFEPRGSVYVKGKDHMEVFLYTTRRDNPLD--DDE-----A
C3 CLPFLTNRYEFEPRGSVYVKGKDHMEVFLFTGRREKPLEDKAD-------
C4 CLPFLTKRYEFEPRGSVYVKGKDHMEVFLFTGRRERPLDDKAN-------
C5 CLPFLTNRYEFEPRGSVYVKGKDHMEVFLYTGRREKPLDTPDED-----A
C6 CLPFFTNRYEFEPRGSVYVKGKDHMEVFLYTGRREKPLESMEQQQLLLDE
****:::**:*******************:* **:.**: :
C1 DKVEQLGTKK-MEHEGR-DEDVVQGEQQAEDKDEEEEEEEEDDDLHSSET
C2 EKVEQLAAKKTKECEERGNEDVVQNEQQEEEDDEEEEEEE--DDLHSSET
C3 DELER-LESKKQEYEEQ-DEVAVQEEED----DEDEDEE---DDLHSSET
C4 DELERSLVAKKLEYEEQ-DEVAVREEEDGDEEEEDEEEE---DDLHSSET
C5 DKLGQLETKNQEYVEQDEDDDGEEEEEEEEDEDEDE------DDLHSSET
C6 DKLDPLEQPGKLEYEEQ-DEDEEEDEEE-----EEEEEE---DDLHSSET
::: * :: . *:: *:* ********
C1 TTLFKSQESLQANGGSHLAPNAAATS----HTHTITLTNNNNHNSSNINN
C2 TTLFKSQESLQANGGSHLAPTATATSTATTHSHTITLTNNNNHNSSN-NN
C3 TTLFKSQESLQANGGSHLAPSNAVNH-------SSMGNNNNNSNANNNVN
C4 TTLFKSQESLQANGGSHLTPTTAITH-------TISSNNNNHSNTNNNVN
C5 TTLFKSQESLQANGGSHLTPIATISLTAG-NNHNNNNIGSSNSSSSTTAA
C6 TTLFKSHESLQANGGNHLTPANGIAT-------TITLTNNNN-------N
******:********.**:* . ...:
C1 NIATSNTTTT-------ANNNSMPVEToooooo-------------
C2 NIGTSTTTTT-------ANNNSMPVET-------------------
C3 NINTSTTTT--------ANNNSMPVETooooooooooooooo----
C4 NLNTSTTTTTTTTTTTAANNNAMPMEToooo---------------
C5 TTTTTTTAAT-------TNNNSMPVETooooooooooooo------
C6 NHNMATTTN---------NNNAMPVETooooooooooooooooooo
. :.*: ***:**:**
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log S [0]
-genepred_score S [0] nsd
-run_name S [0]
-mem_mode S [0] mem
-extend D [1] 1
-extend_mode S [0] very_fast_triplet
-max_n_pair D [0] 10
-seq_name_for_quadruplet S [0] all
-compact S [0] default
-clean S [0] no
-do_self FL [0] 0
-do_normalise D [0] 1000
-template_file S [0]
-setenv S [0] 0
-template_mode S [0]
-flip D [0] 0
-remove_template_file D [0] 0
-profile_template_file S [0]
-in S [0]
-seq S [0]
-aln S [0]
-method_limits S [0]
-method S [0]
-lib S [0]
-profile S [0]
-profile1 S [0]
-profile2 S [0]
-pdb S [0]
-relax_lib D [0] 1
-filter_lib D [0] 0
-shrink_lib D [0] 0
-out_lib W_F [0] no
-out_lib_mode S [0] primary
-lib_only D [0] 0
-outseqweight W_F [0] no
-dpa FL [0] 0
-seq_source S [0] ANY
-cosmetic_penalty D [0] 0
-gapopen D [0] 0
-gapext D [0] 0
-fgapopen D [0] 0
-fgapext D [0] 0
-nomatch D [0] 0
-newtree W_F [0] default
-tree W_F [0] NO
-usetree R_F [0]
-tree_mode S [0] nj
-distance_matrix_mode S [0] ktup
-distance_matrix_sim_mode S [0] idmat_sim1
-quicktree FL [0] 0
-outfile W_F [0] default
-maximise FL [1] 1
-output S [1] score_ascii html score_ascii
-len D [0] 0
-infile R_F [1] /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix S [0] default
-tg_mode D [0] 1
-profile_mode S [0] cw_profile_profile
-profile_comparison S [0] profile
-dp_mode S [0] linked_pair_wise
-ktuple D [0] 1
-ndiag D [0] 0
-diag_threshold D [0] 0
-diag_mode D [0] 0
-sim_matrix S [0] vasiliky
-transform S [0]
-extend_seq FL [0] 0
-outorder S [0] input
-inorder S [0] aligned
-seqnos S [0] off
-case S [0] keep
-cpu D [0] 0
-maxnseq D [0] 1000
-maxlen D [0] -1
-sample_dp D [0] 0
-weight S [0] default
-seq_weight S [0] no
-align FL [1] 1
-mocca FL [0] 0
-domain FL [0] 0
-start D [0] 0
-len D [0] 0
-scale D [0] 0
-mocca_interactive FL [0] 0
-method_evaluate_mode S [0] default
-evaluate_mode S [1] t_coffee_fast
-get_type FL [0] 0
-clean_aln D [0] 0
-clean_threshold D [1] 1
-clean_iteration D [1] 1
-clean_evaluate_mode S [0] t_coffee_fast
-extend_matrix FL [0] 0
-prot_min_sim D [40] 40
-prot_max_sim D [90] 90
-prot_min_cov D [40] 40
-pdb_type S [0] d
-pdb_min_sim D [35] 35
-pdb_max_sim D [100] 100
-pdb_min_cov D [50] 50
-pdb_blast_server W_F [0] EBI
-blast W_F [0]
-blast_server W_F [0] EBI
-pdb_db W_F [0] pdb
-protein_db W_F [0] uniprot
-method_log W_F [0] no
-struc_to_use S [0]
-cache W_F [0] use
-align_pdb_param_file W_F [0] no
-align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble
-external_aligner S [0] NO
-msa_mode S [0] tree
-master S [0] no
-blast_nseq D [0] 0
-lalign_n_top D [0] 10
-iterate D [1] 0
-trim D [0] 0
-split D [0] 0
-trimfile S [0] default
-split D [0] 0
-split_nseq_thres D [0] 0
-split_score_thres D [0] 0
-check_pdb_status D [0] 0
-clean_seq_name D [0] 0
-seq_to_keep S [0]
-dpa_master_aln S [0]
-dpa_maxnseq D [0] 0
-dpa_min_score1 D [0]
-dpa_min_score2 D [0]
-dpa_keep_tmpfile FL [0] 0
-dpa_debug D [0] 0
-multi_core S [0] templates_jobs_relax_msa_evaluate
-n_core D [0] 0
-max_n_proc D [0] 0
-lib_list S [0]
-prune_lib_mode S [0] 5
-tip S [0] none
-rna_lib S [0]
-no_warning D [0] 0
-run_local_script D [0] 0
-plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [62488]
Library Relaxation: Multi_proc [72]
ins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1696 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 1696 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/2/Ac13E-PB/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw 