--- EXPERIMENT NOTES




 --- EXPERIMENT PROPERTIES

#Sat Nov 12 03:03:24 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/2/Abl-PH/input.fasta
input.names=
mrbayes.params=
codeml.params=



 --- PSRF SUMMARY

      Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/2/Abl-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/2/Abl-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)

(Values are saved to the file /opt/ADOPS/2/Abl-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)

Run   Arithmetic mean   Harmonic mean
--------------------------------------
1     -14030.46        -14045.45
2     -14030.35        -14052.16
--------------------------------------
TOTAL   -14030.41        -14051.47
--------------------------------------


Model parameter summaries over the runs sampled in files
"/opt/ADOPS/2/Abl-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/2/Abl-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/2/Abl-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".

95% HPD Interval
--------------------
Parameter         Mean      Variance     Lower       Upper       Median    min ESS*  avg ESS    PSRF+
------------------------------------------------------------------------------------------------------
TL{all}         0.866109    0.001343    0.799140    0.938471    0.865012   1501.00   1501.00    1.000
r(A<->C){all}   0.082519    0.000072    0.065911    0.098710    0.082396    960.07    970.73    1.000
r(A<->G){all}   0.247343    0.000257    0.217282    0.279879    0.247340    774.02    834.48    1.000
r(A<->T){all}   0.167944    0.000293    0.135921    0.203682    0.167428    853.68    911.29    1.002
r(C<->G){all}   0.034157    0.000018    0.025832    0.042249    0.034123   1249.08   1291.70    1.000
r(C<->T){all}   0.377302    0.000364    0.341535    0.416863    0.377052    768.65    916.72    1.000
r(G<->T){all}   0.090735    0.000103    0.071918    0.110587    0.090290    755.60    929.33    1.000
pi(A){all}      0.218501    0.000034    0.206736    0.229292    0.218534    721.37    800.15    1.000
pi(C){all}      0.322814    0.000042    0.309895    0.334795    0.322719    719.95    938.70    1.000
pi(G){all}      0.298373    0.000041    0.285442    0.310422    0.298502   1125.87   1152.91    1.000
pi(T){all}      0.160312    0.000023    0.151152    0.169878    0.160328   1112.03   1164.83    1.000
alpha{1,2}      0.117323    0.000059    0.102551    0.132233    0.117053   1306.95   1329.25    1.000
alpha{3}        6.673444    1.719893    4.478275    9.464101    6.518695   1047.55   1242.06    1.000
pinvar{all}     0.366624    0.000455    0.323033    0.405618    0.366871   1310.94   1365.96    1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.


Setting sumt conformat to Simple



 --- CODEML SUMMARY

Model 1: NearlyNeutral	-12791.345322
Model 2: PositiveSelection	-12791.345323
Model 0: one-ratio	-12912.29851
Model 3: discrete	-12782.246805
Model 7: beta	-12784.814636
Model 8: beta&w>1	-12782.44103


Model 0 vs 1	241.90637600000264

Model 2 vs 1	2.0000006770715117E-6

Model 8 vs 7	4.747211999998399
>C1
MGAQQGKDRGAHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNP
TVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDSGGLG
LQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALYDFQA
GGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLE
KHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYH
YRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQN
KPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVK
TLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHG
NLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLV
GDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSD
VWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERPPGCPPEVYDL
MRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSSA
PSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGGQALTP
NAHHNDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNKQGKQA
PAPPKRTSLLSSSRDSTYREEDPANARCNFIDDLSTNGLARDINSLTQRY
DSETDPAADPDTDATGDSLEQSLSQVIAAPVTNKMQHSLHSGGGGGGIGP
RSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQLHSQAPGPGPPSTQPHHG
NNGVVTSAHPITVGALDVMNVKQVVNRYGTLPKGARIGAYLDSLEDSSEA
APALPATAPSLPPANGHATPPAARLNPKASPIPPQQMIRSNSSGGVTMQN
NAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRSASGVASGVQPAL
ANLEFPPPPLDLPPPPEEFEGGPPPPPPAPESAVQAIQQHLHAQLPNNGN
ISNGNGTNNNDSSHNDVSNIAPSVEEASSRFGVSLRKREPSTDSCSSLGS
PPEDLKEKLITEIKAAGKDTAPASHLANGSGIAVVDPVSLLVTELAESMN
LPKPPPQQQQKLTNGNSTGSGFKAQLKKVEPKKMSAPMPKAEPANTIIDF
KAHLRRVDKEKEPATPAPAPATVAVANNANCNTTGTLNRKEDGSKKFSQA
MQKTEIKIDVTNSNVEADAGAAGEGDLGKRRSTDDEEQSHTEGLGSGGQG
SADMTQSLYEQKPQIQQKPAVPHKPTKLTIYATPIAKLTEPASSASSTQI
SRESILELVGLLEGSLKHPVNAIAGSQWLQLSDKLNILHNSCVIFAENGA
MPPHSKFQFRELVTRVEAQSQHLRSAGSKNVQDNERLVAEVGQSLRQISN
ALNRoooooooooooooooooooo
>C2
MGAQQGKDRGAHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNP
TVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDSGGLG
LQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALYDFQA
GGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLE
KHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYH
YRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQN
KPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVK
TLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHG
NLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLV
GDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSD
VWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPEVYDL
MRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSSA
PSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLSGGQSLTP
NAHHNDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNKQGKQA
PAPPKRTSLLSSSRDSTYREEDPANARCNFIDDLSTNGLARDINSLTQRY
DSETDPAGDPDTDATGDSLEQSLSQVIAAPATNKMQHSLHSGGGGGGIGP
RSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQHHPQAPGPGPPSTQPHHG
NNGVLTSAHPITVGALEVMNVKQVVNRYGTLPKGARIGAYLDSLEDSTEA
APPLPATAPSLPPANGHATPPSARLNPKASPIPPQQMIRSNSSGGVTMQN
NAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRSASGLASGVQPAL
ANLEFPPPPLDLPPPPEEFEGGPPPPPPAPESAVQAIQQHLHAQLPNNGN
ISNGNGSNNNDSSHNDVSNIAPSVEEASSRFGVSLRKREPSTDSCSSLGS
PPEDLKEKLITEIKAAGKESAPASHLANGSGIAVVDPVSLLVTELAESMN
LPKSPPQQQQKLTNGNGTGSGFKAQLKKVEPKKMSAPMPKAEPASTIIDF
KAHLRRVDKEKEPAAPAPAPVAVANNANCNTTGTLNRKEDSSKKFSQAMQ
KTEIKIDVTNSNVEADAGATGEGDLGKRRSTDDEEQSHTEGLGSGGQGAA
DMTQSLYEQKPQIQQKPAVPHKPTKLTIYATPIAKLTEPASSASSTQISR
ESILELVGLLEGSLKHPVNAIAGSQWLQLSDKLNILHNSCVIFAENGAMP
PHSKFQFRELVTRVEAQSQHLRSAGSKNVQDNERLVAEVGQSLRQISNAL
NRoooooooooooooooooooooo
>C3
MGAQQGKDRGAHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVNSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGSGSGLSQRSGGHKDARCNPT
VGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDSGGLGL
QGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALYDFQAG
GENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLEK
HSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHY
RISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQNK
PTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKT
LKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGN
LLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVG
DNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDV
WAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPEVYDLM
RQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSSAP
STSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGGQSLTPN
AHHNDSHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNKQGKQAP
APPKRTSLLSSSRDSTYREEDPATARCNFIDDLSTNGLARDINSLTQRYD
SETDPAADPDTDATGDSLEQSLSQVIAAPATNKMQHSLHSGGGGGGIGPR
SSQQHSSFKRPTGTPVMGNRGLETRQSKRSQHHPLAPGPGPPATQPHHGN
NGVVASAHPITVGALEVMNVKQVVNRYGTLPKVARIGAYLDSLEDSTEAA
PALPATAPALPPANGHATPPAARINPKASPIPPQQMIRSNSSGGVTMQNN
AAASLNKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRNATGAASGVQPALA
NLEFPPPPLDLPPPPEEFEGGPPPPPPAPESAVQAIQQHLHAQLPNNGNI
SNGNGTNNNDSSHNDVSNTAPSVEEASSRFGVSLRKREPSTDSCSSLGSP
PEDLKEKLITEIKAAGKDSAPASQLANGSGIAVVDPVSLLVTELAESMNL
PKPPPQQQKLTNGNGTGSGFKAQLKKVEPKKMSAPIAKAEPANTIIDFKA
HLRRVDKEKEPAAPAPAPVAVTNNANCNTTGTLNRKEDSSKKFSQAMQKT
EIKIDVTNSNVEADAGAAGEGDLGKRRSTDDEEQSHSDGLGSGGQGAADM
TQSLYEQKPQIQQKPAVPHKPTKLTIYATPIAKLAEPASSASSTQISRDS
ILELVGLLEGSLKHPVNAIAGSQWLQLSDKLNILHNSCVIFAENGAMPPH
SKFQFRELVTRVEAQSQHLRSAGSKNVQDNERLVAEVGQSLRQISNALNR
oooooooooooooooooooooooo
>C4
MGAQQGKDRGGHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNP
TVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDSSGLG
LQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALYDFQA
GGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLE
KHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYH
YRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQN
KPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVK
TLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHG
NLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLV
GDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSD
VWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPEVYDL
MRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSSA
PSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGGQSLTP
NAHHTDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNKQGKQA
PAPPKRTSLLSSSRDSTYREEDPATARCNFIDDLSTNGFARDINSLTQRY
DSETDPAADPDTDATGDSLEQSLSQVIAAPATNKMQHSLHSGGGGGIGPR
SSQQHSSFKRPTGTPVMGNRGLETRQSKRSQHHPLAPGPGPPATQPHHGN
NGVVTSAHPITVGALEVMNVKQVVNRYGTLPKGARIGAYLDSLEDSSEAA
PALPATAPSLPPANGHATPPAARINPKASPIPPQQMIRSNSSGGVTMQNN
AAASLNKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRSATGVASGVQPALA
NLEFPPPPLDLPPPPEEFEGGPPPPPPAPESAVQAIQQHLHAQLPNNGNI
SNGNGTNNNDSSHNDVSNTAPSVEEASSRFGVSLRKREPSTDSCSSLGSP
PEDLKEKLITEIKASGKDSAPTSHLANGSGIAVVDPVSQLFTELEESMKL
PKPPPQQQKLTNGNGTGSGFKAQLKKVEPKKMCAPMAKAEPANTIIDFKA
HLRRVDKEKEPAAPAPAPVPAAAPVAVTNNANCNTTGTLNRKEDSSKKFS
QVMQKTEIKIDVTNSNVEADAGAAGEGDLGKRRSTDDEEQSHSDGLGSGG
QGAADMTQSLYEQKPQIQQKPVVPHKPTKLTIYATPIAKLAEPASSTQIS
RESILELVGLLEGSLKHPVNAIAGSQWLQLSDKLNILHNSCVIFAENGAM
PPHSKFQFRELVTRVEAQSQHLRSAGSKNVQDNERLVAEVGQSLRQISNA
LNRooooooooooooooooooooo
>C5
MGAQQGKDRGAHSGGGGSAAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVVSGGGSGGGGGGSGSGLSQRSGGHKDPRCNP
SVGLNIFTEHNEALLQSRPLPHIPAGSAAASLLADAAEMQQHQQDSGGLG
LQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALYDFQA
GGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLE
KHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYH
YRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQN
KPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVK
TLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHG
NLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLV
GDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSD
VWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPEVYDL
MRQCWQWDAADRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSST
APSTSGVASGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGGQSLT
PNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNKQGKQ
APAPPKRTSLLSSSRDSTYREEDPATARCNFIDDLSTNGLARDINSLTQR
YDSETDPTADPDTDATGDSLEHSLSHVIAAPATNKMQQSLHGGGGGIGPR
SSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQHPQAPAPAPPPNQLHHGN
NGVVTGAQPITVGALEVMNVKRVVNRYGTLPKVTRIGAYLDSLEDNSDAT
TAPPAPAPAPPPANGHATPPSARMNPKASPIPPQQMIRSNSSGGVTMQNN
AAASLNKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRSGSGVAAGVQPALA
NLEFPPPPLDLPPPPEEFEGAPPPPPPAPESAVQAIQQHLHAQVPNNGNI
SNGNGTNNNDSSHNDVSNTAPSVEEASSRFGVSLRKREPSTDSCSSLGSP
PEDLKEKLITEIKAAGKENAPASHVANGSGIAVVDPGSLLVTELAESMNL
PKPPPPQQQQQKLTNGNGSGSGFKAQLKKVEPKKMSPPMAKAETASTIID
FKAHLRRVDKEKEPPAPAAAPVASQTVTNNANCNTTGTLNRKEDGSRKFA
QAMQKTEIKIDVTNSNVEAETAAAGEGDLGKRRSTDDEEQSQSQPEGLGG
QVAADMTQSLYEQKPQIQQKPAVPHKPTKLTIYATPIAKLAEPASSGSAS
STQISRESILELVGLLEGSLKHPVNAIAGSQWLQLSDKLNILHNSCVIFA
ENGAMPPHSKFQFRELVTRVEAQSRHLRTAGSKNVQDNERLVAEVGQSLR
QISNALNRoooooooooooooooo
>C6
MGAQQGKDRGAHSGGGSSVAPVSCIGLSSSPVASVSPHCISSSSGASSAP
LGGGSTLRGSRIKNSSSGVVSGGGSGGGGGGSGSGGLSQRSGGHKDSRSN
PTVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDSGGL
GLQGATLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALYDFQ
AGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSL
EKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVY
HYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQ
NKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYNNTVAV
KTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSH
GNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCL
VGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKS
DVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPEVYD
LMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSS
APSTSGVATGGGATSATAASGCASSSSATASLSLTPQMVKKGLPGGQSLT
PNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNKQGKQ
APAPPKRTSLLSSSRDSTYREEDPATARNNFIDDLTTNGLSRDINSLTQR
YDSETDPTADPDTDATGDSLEQNLSHVIAAPANNKMQHSLHSGGGIGPRS
SQQHSSFKRPTGTPVMGNRGLETRQSKRSQQHPQAPAPAPPPTPPHHGNG
AVTTAHPITVGALEVMNVKRVVNRYGTLPKVARIGAYLDSLEDSSEALPA
LPATVPAPPPANGHGTPPAARINPKASPIPPQQMIRSNSSGGVTMQNNAA
ASVNKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRSGSGVGSGAQPALANL
EFPPPPLDLPPPPEEFEGIPPPPPPAPESAVQAIQQHLHAQLPNNGNISN
GNGTNNNDSSHNDVSNTAPSVEEASSRFGVSLRKREPSTDSCSSLGSPPE
DLKEKLITEIKAAGKESAPAPLLANGSGIAAVDPVSLLVTELAESMNLPK
PSPPQQKLTNGNSSGSGFKAQLKKVEQKKMSPPMAKAEPANNIIDFKAHL
RRVDKEKEPATPAPVAQPVTNNANCNTTGTLNRKEDSSKKFAQAVQKTEI
KIDVTNSNVENAETGAAGEGDLGKRRSTDDEEPSHPDGLEQGAPDMTQSL
YEQKPQIQQKPAVPHKPTKLTIYATPIAKLAEPASSGSASSTQISRESIL
ELVGLLEGSLKHPVNAIAGSQWLQLSDKLNILHNSCVIFAENGAMPPHSK
FQFRELVTRVDAQSQHLRSAGSKNVQDNERLVAEVGQSLRQISNALNRoo
oooooooooooooooooooooooo
>C7
MGAQQGKDRGAHSGGGSGAPVSCIGLSSSSSPVASVSPHCISSSSGGSSA
PLGGGSTIRGSRIKSSSGGVASGVNAGGSGSGLSQRSGGHKDAARCNPVG
LNIFTEHNDALLQSRPLPLIPAGSTAASLLADAELQQHQQDSGGLGLQGS
SLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALYDFQAGGEN
QLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLEKHSW
YHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRIS
EDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQNKPTV
FPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKE
DTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLD
FLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDNK
LVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAF
GVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPEVYDLMRQC
WQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSSAPSTS
GVATGGGATTTTAASGCPSSSSATASLSLTPQMVKKGLPGGQSLAPNAHH
NDPHQQPASTPMSETGSSSTKLSTFSSQGKGNVQMRRTTNKQGKQAPAPP
KRTSLLSSSRDSTYREEDPANARGNFIDDLSTNGLARDINSLTQRYDSET
DPTADPDTDATGDSLEQSLSQVIAAPAANKMQHSLHGGGGGIAPRSSQQH
SSFKRPTGTPVMGNRGLETRQSKRSQQHPQTTAPAPPPTQPHHGNNGVVT
SAHPITVGALEVMNVKRVVNRYGTLPKVARIGAYLDSLEDSSEAAPALPA
AAPTPPPANGHATPPGVRINPKTSPIAPQQMIRSNSSGGVTMQNNAAASL
NKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRSGSGVGSGAQPALANLEFP
PPPLDLPPPPEEFEGAPPPPPPAPESAVQAIQQHLHAQLPNNGNISNGNG
TNNNDSSHNDVSNTAPSVEEASSRFGVSLRKREPSTDSCSSLGSPPEDLK
EKLITEIKAAGKDSAPTSHLANGSGIAAVDPVSQLVTELAESMNLPKQTT
QQQKLTNGNGSGSGSGFKAQLKKVEPKKMSPPMAKAEPTSSIIDFKAHLR
RVDKEKESATPAPVSGAAPQLVTINANTGTLNRKEDSSKKFAQAMQKTEI
KIDVTNSNVEAEAGAAGDGDLGKRRSTDDEEQSHQEGPGSGSGSQGATDM
TQSLYEQKPQIQQKPAVPHKPTKLTIYATPIAKLAEPASSTQISRESILE
LVGLLEGSLKHPVNAIAGSQWLQLSDKLNILHNSCVIFAENGAMPPHSKF
QFRELVTRVDAQSQHLRSASSKNVQDNERLVAEVGQSLRQISNALNRooo
oooooooooooooooooooooooo
>C8
MGAQQGKDRGAHSGGGSVAPVSCIGLSSSSSPVASVSPHCISSSSGTSSA
PLGGGSTLRGSRIKSSSVGVASGVNAVGSGSGLSQRSGGHKDAARCNPTV
GLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDSGGLGLQ
GSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALYDFQAGG
ENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLEKH
SWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYR
ISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPAPKQNKP
TVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTL
KEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNL
LDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGD
NKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVW
AFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPEVYDLMR
QCWQWDAADRPTFKSIHHALEHMFQESSITEAVEKQLNANATSASSSAPS
TSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGGQSLTPNA
HHNDPHQQPASTPMSETGSSSTKLSTFSSQGKGNVQMRRTTNKQGKQAPA
PPKRTSLLSSSRDSTYREEDPANARGNFIDDLTTNGLARDINSLTQRYDS
ETDPAADPDTDATGDSLEQSLSQVIAAPATNKMQHSLHGGGGGGGGIAPR
SSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQHPQTSAPPPPATQAHHGN
NGVVASAHPITVGALEVMNVKRVVNRYGTLPKVARIGAYLDSLEDSGEAT
TAPPPATAPAPPPANGHATPPGARINPKTSPIAPQQMIRSNSSGGVTMQN
NAAASLNKLQRHRTTTEGTMMTFSSFRAGNSSSSPKRSGCGVGPVGAQPA
LANLEFPPPPLDLPPPPEEFEGAPPPPPPAPESAVQAIQQHLHAQLPNNG
NVSNGNGTNNNDSSHNDVSNTAPSVEEASSRFGVSLRKREPSTDSCSSLG
SPPEDLKEKLITEIKAAGKESAPASHLANGSGIAAVDPVSLLVTELAESM
NLPKQPQSQPTLPQQQQQKLTNGNGSGTGSGSGFKAQLKKVEPKKMSPPM
AKAEPASSIIDFKAHLRRVDKEKEPSVPAPAPAAPQLVTNNANTGTLNRK
EDSSRKFAQAMQKTEIKIDVTNSNVEADTGAAGEGDLGKRRSTDDEEQSH
QEGPGSGSGSGSGLGGQGPADMTQSLYEQKPQIQQKPAVPHKPTKLTIYA
TPIAKLAEPASSGSASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQ
LSDKLNILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSQHLRSAGSKN
VQDNERLVAEVGQSLRQISNALNR
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE:  ], CPU=0.00 sec, SCORE=100, Nseq=8, Len=1565 

C1              MGAQQGKDRGAHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C2              MGAQQGKDRGAHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C3              MGAQQGKDRGAHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVNS
C4              MGAQQGKDRGGHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C5              MGAQQGKDRGAHSGGGGSAAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C6              MGAQQGKDRGAHSGGGSSVAPVSCIGLSSS--PVASVSPHCISSSSGASS
C7              MGAQQGKDRGAHSGGG-SGAPVSCIGLSSSSSPVASVSPHCISSSSGGSS
C8              MGAQQGKDRGAHSGGG-SVAPVSCIGLSSSSSPVASVSPHCISSSSGTSS
                **********.***** * ***********  *************** .*

C1              APLGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSG-LSQRSGGHKDA-
C2              APLGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSG-LSQRSGGHKDA-
C3              APLGGGSTLRGSRIKSSSSGVASGSGSGGGGG-SGSG-LSQRSGGHKDA-
C4              APLGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSG-LSQRSGGHKDA-
C5              APLGGGSTLRGSRIKSSSSGVVSGGGSGGGGGGSGSG-LSQRSGGHKDP-
C6              APLGGGSTLRGSRIKNSSSGVVSGGGSGGGGGGSGSGGLSQRSGGHKDS-
C7              APLGGGSTIRGSRIKSSSGGVASGVNAG----GSGSG-LSQRSGGHKDAA
C8              APLGGGSTLRGSRIKSSSVGVASGVNAV----GSGSG-LSQRSGGHKDAA
                ********:******.** **.** .:      **** **********. 

C1              RCNPTVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDS
C2              RCNPTVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDS
C3              RCNPTVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDS
C4              RCNPTVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDS
C5              RCNPSVGLNIFTEHNEALLQSRPLPHIPAGSAAASLLADAAEMQQHQQDS
C6              RSNPTVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDS
C7              RCNP-VGLNIFTEHNDALLQSRPLPLIPAGSTAASLLAD-AELQQHQQDS
C8              RCNPTVGLNIFTEHNEALLQSRPLPHIPAGSTAASLLADAAELQQHQQDS
                *.** **********:********* *****:******* **:*******

C1              GGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALY
C2              GGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALY
C3              GGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALY
C4              SGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALY
C5              GGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALY
C6              GGLGLQGATLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALY
C7              GGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALY
C8              GGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEEDDPQLFVALY
                .******::*****************************************

C1              DFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPL
C2              DFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPL
C3              DFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPL
C4              DFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPL
C5              DFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPL
C6              DFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPL
C7              DFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPL
C8              DFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPL
                **************************************************

C1              NSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEG
C2              NSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEG
C3              NSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEG
C4              NSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEG
C5              NSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEG
C6              NSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEG
C7              NSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEG
C8              NSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEG
                **************************************************

C1              RVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPA
C2              RVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPA
C3              RVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPA
C4              RVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPA
C5              RVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPA
C6              RVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPA
C7              RVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPA
C8              RVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPA
                **************************************************

C1              PKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT
C2              PKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT
C3              PKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT
C4              PKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT
C5              PKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT
C6              PKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYNNT
C7              PKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT
C8              PKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT
                ***********************************************.**

C1              VAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEF
C2              VAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEF
C3              VAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEF
C4              VAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEF
C5              VAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEF
C6              VAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEF
C7              VAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEF
C8              VAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEF
                **************************************************

C1              MSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR
C2              MSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR
C3              MSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR
C4              MSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR
C5              MSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR
C6              MSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR
C7              MSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR
C8              MSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAAR
                **************************************************

C1              NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFS
C2              NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFS
C3              NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFS
C4              NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFS
C5              NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFS
C6              NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFS
C7              NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFS
C8              NCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFS
                **************************************************

C1              TKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERPPGCPPE
C2              TKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPE
C3              TKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPE
C4              TKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPE
C5              TKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPE
C6              TKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPE
C7              TKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPE
C8              TKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYRMERPPGCPPE
                ************************.**********:**************

C1              VYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSA
C2              VYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSA
C3              VYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSA
C4              VYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSA
C5              VYDLMRQCWQWDAADRPTFKSIHHALEHMFQESSITEAVEKQLNANATSA
C6              VYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSA
C7              VYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLNANATSA
C8              VYDLMRQCWQWDAADRPTFKSIHHALEHMFQESSITEAVEKQLNANATSA
                *************:************************************

C1              SSS-APSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGG
C2              SSS-APSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLSGG
C3              SSS-APSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGG
C4              SSS-APSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGG
C5              SSSTAPSTSGVASGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGG
C6              SSS-APSTSGVATGGGATSATAASGCASSSSATASLSLTPQMVKKGLPGG
C7              SSS-APSTSGVATGGGATTTTAASGCPSSSSATASLSLTPQMVKKGLPGG
C8              SSS-APSTSGVATGGGATTTTAASGCASSSSATASLSLTPQMVKKGLPGG
                *** ********:*****::******.********************.**

C1              QALTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNK
C2              QSLTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNK
C3              QSLTPNAHHNDSHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNK
C4              QSLTPNAHHTDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNK
C5              QSLTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNK
C6              QSLTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQGKGNVQMRRTTNK
C7              QSLAPNAHHNDPHQQPASTPMSETGSSSTKLSTFSSQGKGNVQMRRTTNK
C8              QSLTPNAHHNDPHQQPASTPMSETGSSSTKLSTFSSQGKGNVQMRRTTNK
                *:*:*****.*.*** **********:***********************

C1              QGKQAPAPPKRTSLLSSSRDSTYREEDPANARCNFIDDLSTNGLARDINS
C2              QGKQAPAPPKRTSLLSSSRDSTYREEDPANARCNFIDDLSTNGLARDINS
C3              QGKQAPAPPKRTSLLSSSRDSTYREEDPATARCNFIDDLSTNGLARDINS
C4              QGKQAPAPPKRTSLLSSSRDSTYREEDPATARCNFIDDLSTNGFARDINS
C5              QGKQAPAPPKRTSLLSSSRDSTYREEDPATARCNFIDDLSTNGLARDINS
C6              QGKQAPAPPKRTSLLSSSRDSTYREEDPATARNNFIDDLTTNGLSRDINS
C7              QGKQAPAPPKRTSLLSSSRDSTYREEDPANARGNFIDDLSTNGLARDINS
C8              QGKQAPAPPKRTSLLSSSRDSTYREEDPANARGNFIDDLTTNGLARDINS
                *****************************.** ******:***::*****

C1              LTQRYDSETDPAADPDTDATGDSLEQSLSQVIAAPVTNKMQHSLHSGGGG
C2              LTQRYDSETDPAGDPDTDATGDSLEQSLSQVIAAP