--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Sat Nov 12 02:31:40 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/2/Abl-PG/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -14145.78 -14162.07
2 -14145.81 -14161.96
--------------------------------------
TOTAL -14145.80 -14162.02
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.850206 0.001258 0.784673 0.920775 0.848807 1220.41 1360.70 1.000
r(A<->C){all} 0.082544 0.000074 0.066486 0.099904 0.082217 889.46 961.19 1.000
r(A<->G){all} 0.245478 0.000240 0.215014 0.275517 0.244912 567.37 639.51 1.000
r(A<->T){all} 0.165948 0.000267 0.132300 0.196264 0.165722 573.63 748.53 1.000
r(C<->G){all} 0.034847 0.000019 0.026865 0.043780 0.034732 1004.72 1125.43 1.000
r(C<->T){all} 0.379158 0.000362 0.340370 0.415053 0.378976 573.66 668.20 1.000
r(G<->T){all} 0.092024 0.000102 0.072911 0.112613 0.091608 967.55 984.13 1.000
pi(A){all} 0.220232 0.000034 0.209390 0.231291 0.220213 677.17 982.02 1.000
pi(C){all} 0.322661 0.000042 0.310194 0.335938 0.322770 921.57 1094.82 1.000
pi(G){all} 0.296366 0.000040 0.284546 0.309180 0.296220 979.60 1061.19 1.000
pi(T){all} 0.160742 0.000024 0.150710 0.169818 0.160702 862.08 891.78 1.000
alpha{1,2} 0.118733 0.000057 0.104837 0.133830 0.118512 1308.81 1380.11 1.000
alpha{3} 6.583351 1.625245 4.283954 9.201803 6.458878 970.19 1233.89 1.000
pinvar{all} 0.372741 0.000455 0.332753 0.414770 0.372817 1372.46 1380.23 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -12880.732526
Model 2: PositiveSelection -12880.732526
Model 0: one-ratio -13002.697438
Model 3: discrete -12871.879053
Model 7: beta -12874.428382
Model 8: beta&w>1 -12872.07025
Model 0 vs 1 243.92982399999892
Model 2 vs 1 0.0
Model 8 vs 7 4.716263999998773
>C1
MGAQQGKDRGAHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNP
TVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASL
LADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAP
GPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDS
GNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESE
SSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVP
HEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQY
GEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIG
VCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSY
LESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPI
KWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLD
KGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSIT
EAVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLS
LTPQMVKKGLPGGQALTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQ
GKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPANARCNFID
DLSTNGLARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIAAPVT
NKMQHSLHSGGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQ
LHSQAPGPGPPSTQPHHGNNGVVTSAHPITVGALDVMNVKQVVNRYGTLP
KGARIGAYLDSLEDSSEAAPALPATAPSLPPANGHATPPAARLNPKASPI
PPQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSS
SSPKRSASGVASGVQPALANLEFPPPPLDLPPPPEEFEGGPPPPPPAPES
AVQAIQQHLHAQLPNNGNISNGNGTNNNDSSHNDVSNIAPSVEEASSRFG
VSLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKDTAPASHLANGSGI
AVVDPVSLLVTELAESMNLPKPPPQQQQKLTNGNSTGSGFKAQLKKVEPK
KMSAPMPKAEPANTIIDFKAHLRRVDKEKEPATPAPAPATVAVANNANCN
TTGTLNRKEDGSKKFSQAMQKTEIKIDVTNSNVEADAGAAGEGDLGKRRS
TDDEEQSHTEGLGSGGQGSADMTQSLYEQKPQIQQKPAVPHKPTKLTIYA
TPIAKLTEPASSASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLS
DKLNILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSQHLRSAGSKNVQ
DNERLVAEVGQSLRQISNALNRoooooooooooooooooooo
>C2
MGAQQGKDRGAHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNP
TVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASL
LADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAP
GPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDS
GNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESE
SSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVP
HEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQY
GEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIG
VCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSY
LESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPI
KWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLE
KGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSIT
EAVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLS
LTPQMVKKGLSGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQ
GKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPANARCNFID
DLSTNGLARDINSLTQRYDSETDPAGDPDTDATGDSLEQSLSQVIAAPAT
NKMQHSLHSGGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQ
HHPQAPGPGPPSTQPHHGNNGVLTSAHPITVGALEVMNVKQVVNRYGTLP
KGARIGAYLDSLEDSTEAAPPLPATAPSLPPANGHATPPSARLNPKASPI
PPQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSS
SSPKRSASGLASGVQPALANLEFPPPPLDLPPPPEEFEGGPPPPPPAPES
AVQAIQQHLHAQLPNNGNISNGNGSNNNDSSHNDVSNIAPSVEEASSRFG
VSLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKESAPASHLANGSGI
AVVDPVSLLVTELAESMNLPKSPPQQQQKLTNGNGTGSGFKAQLKKVEPK
KMSAPMPKAEPASTIIDFKAHLRRVDKEKEPAAPAPAPVAVANNANCNTT
GTLNRKEDSSKKFSQAMQKTEIKIDVTNSNVEADAGATGEGDLGKRRSTD
DEEQSHTEGLGSGGQGAADMTQSLYEQKPQIQQKPAVPHKPTKLTIYATP
IAKLTEPASSASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLSDK
LNILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSQHLRSAGSKNVQDN
ERLVAEVGQSLRQISNALNRoooooooooooooooooooooo
>C3
MGAQQGKDRGAHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVNSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGSGSGLSQRSGGHKDARCNPT
VGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASLL
ADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPG
PEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSG
NVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESES
SPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPH
EGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYG
EVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGV
CTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYL
ESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIK
WTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEK
GYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITE
AVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLSL
TPQMVKKGLPGGQSLTPNAHHNDSHQQQASTPMSETGSTSTKLSTFSSQG
KGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPATARCNFIDD
LSTNGLARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIAAPATN
KMQHSLHSGGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQH
HPLAPGPGPPATQPHHGNNGVVASAHPITVGALEVMNVKQVVNRYGTLPK
VARIGAYLDSLEDSTEAAPALPATAPALPPANGHATPPAARINPKASPIP
PQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSS
SPKRNATGAASGVQPALANLEFPPPPLDLPPPPEEFEGGPPPPPPAPESA
VQAIQQHLHAQLPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGV
SLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKDSAPASQLANGSGIA
VVDPVSLLVTELAESMNLPKPPPQQQKLTNGNGTGSGFKAQLKKVEPKKM
SAPIAKAEPANTIIDFKAHLRRVDKEKEPAAPAPAPVAVTNNANCNTTGT
LNRKEDSSKKFSQAMQKTEIKIDVTNSNVEADAGAAGEGDLGKRRSTDDE
EQSHSDGLGSGGQGAADMTQSLYEQKPQIQQKPAVPHKPTKLTIYATPIA
KLAEPASSASSTQISRDSILELVGLLEGSLKHPVNAIAGSQWLQLSDKLN
ILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSQHLRSAGSKNVQDNER
LVAEVGQSLRQISNALNRoooooooooooooooooooooooo
>C4
MGAQQGKDRGGHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNP
TVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASL
LADAAELQQHQQDSSGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAP
GPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDS
GNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESE
SSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVP
HEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQY
GEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIG
VCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSY
LESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPI
KWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLE
KGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSIT
EAVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLS
LTPQMVKKGLPGGQSLTPNAHHTDPHQQQASTPMSETGSTSTKLSTFSSQ
GKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPATARCNFID
DLSTNGFARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIAAPAT
NKMQHSLHSGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQH
HPLAPGPGPPATQPHHGNNGVVTSAHPITVGALEVMNVKQVVNRYGTLPK
GARIGAYLDSLEDSSEAAPALPATAPSLPPANGHATPPAARINPKASPIP
PQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSS
SPKRSATGVASGVQPALANLEFPPPPLDLPPPPEEFEGGPPPPPPAPESA
VQAIQQHLHAQLPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGV
SLRKREPSTDSCSSLGSPPEDLKEKLITEIKASGKDSAPTSHLANGSGIA
VVDPVSQLFTELEESMKLPKPPPQQQKLTNGNGTGSGFKAQLKKVEPKKM
CAPMAKAEPANTIIDFKAHLRRVDKEKEPAAPAPAPVPAAAPVAVTNNAN
CNTTGTLNRKEDSSKKFSQVMQKTEIKIDVTNSNVEADAGAAGEGDLGKR
RSTDDEEQSHSDGLGSGGQGAADMTQSLYEQKPQIQQKPVVPHKPTKLTI
YATPIAKLAEPASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLSD
KLNILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSQHLRSAGSKNVQD
NERLVAEVGQSLRQISNALNRooooooooooooooooooooo
>C5
MGAQQGKDRGAHSGGGGSAAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVVSGGGSGGGGGGSGSGLSQRSGGHKDPRCNP
SVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSAAASL
LADAAEMQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAP
GPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDS
GNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESE
SSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVP
HEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQY
GEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIG
VCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSY
LESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPI
KWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLE
KGYRMERPPGCPPEVYDLMRQCWQWDAADRPTFKSIHHALEHMFQESSIT
EAVEKQLNANATSASSSTAPSTSGVASGGGATTTTAASGCASSSSATASL
SLTPQMVKKGLPGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSS
QGKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPATARCNFI
DDLSTNGLARDINSLTQRYDSETDPTADPDTDATGDSLEHSLSHVIAAPA
TNKMQQSLHGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQ
HPQAPAPAPPPNQLHHGNNGVVTGAQPITVGALEVMNVKRVVNRYGTLPK
VTRIGAYLDSLEDNSDATTAPPAPAPAPPPANGHATPPSARMNPKASPIP
PQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSS
SPKRSGSGVAAGVQPALANLEFPPPPLDLPPPPEEFEGAPPPPPPAPESA
VQAIQQHLHAQVPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGV
SLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKENAPASHVANGSGIA
VVDPGSLLVTELAESMNLPKPPPPQQQQQKLTNGNGSGSGFKAQLKKVEP
KKMSPPMAKAETASTIIDFKAHLRRVDKEKEPPAPAAAPVASQTVTNNAN
CNTTGTLNRKEDGSRKFAQAMQKTEIKIDVTNSNVEAETAAAGEGDLGKR
RSTDDEEQSQSQPEGLGGQVAADMTQSLYEQKPQIQQKPAVPHKPTKLTI
YATPIAKLAEPASSGSASSTQISRESILELVGLLEGSLKHPVNAIAGSQW
LQLSDKLNILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSRHLRTAGS
KNVQDNERLVAEVGQSLRQISNALNRoooooooooooooooo
>C6
MGAQQGKDRGAHSGGGSSVAPVSCIGLSSSPVASVSPHCISSSSGASSAP
LGGGSTLRGSRIKNSSSGVVSGGGSGGGGGGSGSGGLSQRSGGHKDSRSN
PTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAAS
LLADAAELQQHQQDSGGLGLQGATLGGGHSSTTSVFESAHRWTSKENLLA
PGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSD
SGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRES
ESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSV
PHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQ
YGEVYEAVWKRYNNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLI
GVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMS
YLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFP
IKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKL
EKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSI
TEAVEKQLNANATSASSSAPSTSGVATGGGATSATAASGCASSSSATASL
SLTPQMVKKGLPGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSS
QGKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPATARNNFI
DDLTTNGLSRDINSLTQRYDSETDPTADPDTDATGDSLEQNLSHVIAAPA
NNKMQHSLHSGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQH
PQAPAPAPPPTPPHHGNGAVTTAHPITVGALEVMNVKRVVNRYGTLPKVA
RIGAYLDSLEDSSEALPALPATVPAPPPANGHGTPPAARINPKASPIPPQ
QMIRSNSSGGVTMQNNAAASVNKLQRHRTTTEGTMMTFSSFRAGGSSSSP
KRSGSGVGSGAQPALANLEFPPPPLDLPPPPEEFEGIPPPPPPAPESAVQ
AIQQHLHAQLPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGVSL
RKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKESAPAPLLANGSGIAAV
DPVSLLVTELAESMNLPKPSPPQQKLTNGNSSGSGFKAQLKKVEQKKMSP
PMAKAEPANNIIDFKAHLRRVDKEKEPATPAPVAQPVTNNANCNTTGTLN
RKEDSSKKFAQAVQKTEIKIDVTNSNVENAETGAAGEGDLGKRRSTDDEE
PSHPDGLEQGAPDMTQSLYEQKPQIQQKPAVPHKPTKLTIYATPIAKLAE
PASSGSASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLSDKLNIL
HNSCVIFAENGAMPPHSKFQFRELVTRVDAQSQHLRSAGSKNVQDNERLV
AEVGQSLRQISNALNRoooooooooooooooooooooooooo
>C7
MGAQQGKDRGAHSGGGSGAPVSCIGLSSSSSPVASVSPHCISSSSGGSSA
PLGGGSTIRGSRIKSSSGGVASGVNAGGSGSGLSQRSGGHKDAARCNPVG
LNIFTEHNGTKHSSFRGHPGKYHMNLDALLQSRPLPLIPAGSTAASLLAD
AELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEE
DDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVG
WVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPG
QRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGH
GLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVY
EAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTR
EPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESR
NYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTA
PEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYR
MERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVE
KQLNANATSASSSAPSTSGVATGGGATTTTAASGCPSSSSATASLSLTPQ
MVKKGLPGGQSLAPNAHHNDPHQQPASTPMSETGSSSTKLSTFSSQGKGN
VQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPANARGNFIDDLST
NGLARDINSLTQRYDSETDPTADPDTDATGDSLEQSLSQVIAAPAANKMQ
HSLHGGGGGIAPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQHPQTT
APAPPPTQPHHGNNGVVTSAHPITVGALEVMNVKRVVNRYGTLPKVARIG
AYLDSLEDSSEAAPALPAAAPTPPPANGHATPPGVRINPKTSPIAPQQMI
RSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRS
GSGVGSGAQPALANLEFPPPPLDLPPPPEEFEGAPPPPPPAPESAVQAIQ
QHLHAQLPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGVSLRKR
EPSTDSCSSLGSPPEDLKEKLITEIKAAGKDSAPTSHLANGSGIAAVDPV
SQLVTELAESMNLPKQTTQQQKLTNGNGSGSGSGFKAQLKKVEPKKMSPP
MAKAEPTSSIIDFKAHLRRVDKEKESATPAPVSGAAPQLVTINANTGTLN
RKEDSSKKFAQAMQKTEIKIDVTNSNVEAEAGAAGDGDLGKRRSTDDEEQ
SHQEGPGSGSGSQGATDMTQSLYEQKPQIQQKPAVPHKPTKLTIYATPIA
KLAEPASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLSDKLNILH
NSCVIFAENGAMPPHSKFQFRELVTRVDAQSQHLRSASSKNVQDNERLVA
EVGQSLRQISNALNRooooooooooooooooooooooooooo
>C8
MGAQQGKDRGAHSGGGSVAPVSCIGLSSSSSPVASVSPHCISSSSGTSSA
PLGGGSTLRGSRIKSSSVGVASGVNAVGSGSGLSQRSGGHKDAARCNPTV
GLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASLLA
DAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGP
EEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGN
VGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESS
PGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHE
GHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGE
VYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVC
TREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLE
SRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKW
TAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKG
YRMERPPGCPPEVYDLMRQCWQWDAADRPTFKSIHHALEHMFQESSITEA
VEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLSLT
PQMVKKGLPGGQSLTPNAHHNDPHQQPASTPMSETGSSSTKLSTFSSQGK
GNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPANARGNFIDDL
TTNGLARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIAAPATNK
MQHSLHGGGGGGGGIAPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQ
HPQTSAPPPPATQAHHGNNGVVASAHPITVGALEVMNVKRVVNRYGTLPK
VARIGAYLDSLEDSGEATTAPPPATAPAPPPANGHATPPGARINPKTSPI
APQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGNSS
SSPKRSGCGVGPVGAQPALANLEFPPPPLDLPPPPEEFEGAPPPPPPAPE
SAVQAIQQHLHAQLPNNGNVSNGNGTNNNDSSHNDVSNTAPSVEEASSRF
GVSLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKESAPASHLANGSG
IAAVDPVSLLVTELAESMNLPKQPQSQPTLPQQQQQKLTNGNGSGTGSGS
GFKAQLKKVEPKKMSPPMAKAEPASSIIDFKAHLRRVDKEKEPSVPAPAP
AAPQLVTNNANTGTLNRKEDSSRKFAQAMQKTEIKIDVTNSNVEADTGAA
GEGDLGKRRSTDDEEQSHQEGPGSGSGSGSGLGGQGPADMTQSLYEQKPQ
IQQKPAVPHKPTKLTIYATPIAKLAEPASSGSASSTQISRESILELVGLL
EGSLKHPVNAIAGSQWLQLSDKLNILHNSCVIFAENGAMPPHSKFQFREL
VTRVEAQSQHLRSAGSKNVQDNERLVAEVGQSLRQISNALNR
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=8, Len=1583
C1 MGAQQGKDRGAHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C2 MGAQQGKDRGAHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C3 MGAQQGKDRGAHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVNS
C4 MGAQQGKDRGGHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C5 MGAQQGKDRGAHSGGGGSAAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C6 MGAQQGKDRGAHSGGGSSVAPVSCIGLSSS--PVASVSPHCISSSSGASS
C7 MGAQQGKDRGAHSGGG-SGAPVSCIGLSSSSSPVASVSPHCISSSSGGSS
C8 MGAQQGKDRGAHSGGG-SVAPVSCIGLSSSSSPVASVSPHCISSSSGTSS
**********.***** * *********** *************** .*
C1 APLGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSG-LSQRSGGHKDA-
C2 APLGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSG-LSQRSGGHKDA-
C3 APLGGGSTLRGSRIKSSSSGVASGSGSGGGGG-SGSG-LSQRSGGHKDA-
C4 APLGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSG-LSQRSGGHKDA-
C5 APLGGGSTLRGSRIKSSSSGVVSGGGSGGGGGGSGSG-LSQRSGGHKDP-
C6 APLGGGSTLRGSRIKNSSSGVVSGGGSGGGGGGSGSGGLSQRSGGHKDS-
C7 APLGGGSTIRGSRIKSSSGGVASGVNAG----GSGSG-LSQRSGGHKDAA
C8 APLGGGSTLRGSRIKSSSVGVASGVNAV----GSGSG-LSQRSGGHKDAA
********:******.** **.** .: **** **********.
C1 RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C2 RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C3 RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C4 RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C5 RCNPSVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSA
C6 RSNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C7 RCNP-VGLNIFTEHNGTKHSSFRGHPGKYHMNLDALLQSRPLPLIPAGST
C8 RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
*.** ****************************:********* *****:
C1 AASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C2 AASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C3 AASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C4 AASLLADAAELQQHQQDSSGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C5 AASLLADAAEMQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C6 AASLLADAAELQQHQQDSGGLGLQGATLGGGHSSTTSVFESAHRWTSKEN
C7 AASLLAD-AELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C8 AASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
******* **:*******.******::***********************
C1 LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C2 LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C3 LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C4 LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C5 LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C6 LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C7 LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C8 LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
**************************************************
C1 HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C2 HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C3 HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C4 HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C5 HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C6 HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C7 HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C8 HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
**************************************************
C1 RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C2 RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C3 RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C4 RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C5 RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C6 RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C7 RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C8 RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
**************************************************
C1 HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C2 HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C3 HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C4 HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C5 HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C6 HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C7 HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C8 HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
**************************************************
C1 GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C2 GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C3 GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C4 GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C5 GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C6 GGQYGEVYEAVWKRYNNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C7 GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C8 GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
***************.**********************************
C1 QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C2 QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C3 QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C4 QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C5 QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C6 QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C7 QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C8 QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
**************************************************
C1 GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C2 GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C3 GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C4 GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C5 GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C6 GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C7 GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C8 GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
**************************************************
C1 KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVY
C2 KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C3 KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C4 KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C5 KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C6 KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C7 KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C8 KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
******************************************.*******
C1 HKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C2 HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C3 HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C4 HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C5 HKLEKGYRMERPPGCPPEVYDLMRQCWQWDAADRPTFKSIHHALEHMFQE
C6 HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C7 HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C8 HKLEKGYRMERPPGCPPEVYDLMRQCWQWDAADRPTFKSIHHALEHMFQE
***:***************************:******************
C1 SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
C2 SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
C3 SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
C4 SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
C5 SSITEAVEKQLNANATSASSSTAPSTSGVASGGGATTTTAASGCASSSSA
C6 SSITEAVEKQLNANATSASSS-APSTSGVATGGGATSATAASGCASSSSA
C7 SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCPSSSSA
C8 SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
********************* ********:*****::******.*****
C1 TASLSLTPQMVKKGLPGGQALTPNAHHNDPHQQQASTPMSETGSTSTKLS
C2 TASLSLTPQMVKKGLSGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLS
C3 TASLSLTPQMVKKGLPGGQSLTPNAHHNDSHQQQASTPMSETGSTSTKLS
C4 TASLSLTPQMVKKGLPGGQSLTPNAHHTDPHQQQASTPMSETGSTSTKLS
C5 TASLSLTPQMVKKGLPGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLS
C6 TASLSLTPQMVKKGLPGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLS
C7 TASLSLTPQMVKKGLPGGQSLAPNAHHNDPHQQPASTPMSETGSSSTKLS
C8 TASLSLTPQMVKKGLPGGQSLTPNAHHNDPHQQPASTPMSETGSSSTKLS
