--- EXPERIMENT NOTES




 --- EXPERIMENT PROPERTIES

#Sat Nov 12 02:31:40 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/2/Abl-PG/input.fasta
input.names=
mrbayes.params=
codeml.params=



 --- PSRF SUMMARY

      Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)

(Values are saved to the file /opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)

Run   Arithmetic mean   Harmonic mean
--------------------------------------
1     -14145.78        -14162.07
2     -14145.81        -14161.96
--------------------------------------
TOTAL   -14145.80        -14162.02
--------------------------------------


Model parameter summaries over the runs sampled in files
"/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/2/Abl-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".

95% HPD Interval
--------------------
Parameter         Mean      Variance     Lower       Upper       Median    min ESS*  avg ESS    PSRF+
------------------------------------------------------------------------------------------------------
TL{all}         0.850206    0.001258    0.784673    0.920775    0.848807   1220.41   1360.70    1.000
r(A<->C){all}   0.082544    0.000074    0.066486    0.099904    0.082217    889.46    961.19    1.000
r(A<->G){all}   0.245478    0.000240    0.215014    0.275517    0.244912    567.37    639.51    1.000
r(A<->T){all}   0.165948    0.000267    0.132300    0.196264    0.165722    573.63    748.53    1.000
r(C<->G){all}   0.034847    0.000019    0.026865    0.043780    0.034732   1004.72   1125.43    1.000
r(C<->T){all}   0.379158    0.000362    0.340370    0.415053    0.378976    573.66    668.20    1.000
r(G<->T){all}   0.092024    0.000102    0.072911    0.112613    0.091608    967.55    984.13    1.000
pi(A){all}      0.220232    0.000034    0.209390    0.231291    0.220213    677.17    982.02    1.000
pi(C){all}      0.322661    0.000042    0.310194    0.335938    0.322770    921.57   1094.82    1.000
pi(G){all}      0.296366    0.000040    0.284546    0.309180    0.296220    979.60   1061.19    1.000
pi(T){all}      0.160742    0.000024    0.150710    0.169818    0.160702    862.08    891.78    1.000
alpha{1,2}      0.118733    0.000057    0.104837    0.133830    0.118512   1308.81   1380.11    1.000
alpha{3}        6.583351    1.625245    4.283954    9.201803    6.458878    970.19   1233.89    1.000
pinvar{all}     0.372741    0.000455    0.332753    0.414770    0.372817   1372.46   1380.23    1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.


Setting sumt conformat to Simple



 --- CODEML SUMMARY

Model 1: NearlyNeutral	-12880.732526
Model 2: PositiveSelection	-12880.732526
Model 0: one-ratio	-13002.697438
Model 3: discrete	-12871.879053
Model 7: beta	-12874.428382
Model 8: beta&w>1	-12872.07025


Model 0 vs 1	243.92982399999892

Model 2 vs 1	0.0

Model 8 vs 7	4.716263999998773
>C1
MGAQQGKDRGAHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNP
TVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASL
LADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAP
GPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDS
GNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESE
SSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVP
HEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQY
GEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIG
VCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSY
LESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPI
KWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLD
KGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSIT
EAVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLS
LTPQMVKKGLPGGQALTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQ
GKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPANARCNFID
DLSTNGLARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIAAPVT
NKMQHSLHSGGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQ
LHSQAPGPGPPSTQPHHGNNGVVTSAHPITVGALDVMNVKQVVNRYGTLP
KGARIGAYLDSLEDSSEAAPALPATAPSLPPANGHATPPAARLNPKASPI
PPQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSS
SSPKRSASGVASGVQPALANLEFPPPPLDLPPPPEEFEGGPPPPPPAPES
AVQAIQQHLHAQLPNNGNISNGNGTNNNDSSHNDVSNIAPSVEEASSRFG
VSLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKDTAPASHLANGSGI
AVVDPVSLLVTELAESMNLPKPPPQQQQKLTNGNSTGSGFKAQLKKVEPK
KMSAPMPKAEPANTIIDFKAHLRRVDKEKEPATPAPAPATVAVANNANCN
TTGTLNRKEDGSKKFSQAMQKTEIKIDVTNSNVEADAGAAGEGDLGKRRS
TDDEEQSHTEGLGSGGQGSADMTQSLYEQKPQIQQKPAVPHKPTKLTIYA
TPIAKLTEPASSASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLS
DKLNILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSQHLRSAGSKNVQ
DNERLVAEVGQSLRQISNALNRoooooooooooooooooooo
>C2
MGAQQGKDRGAHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNP
TVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASL
LADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAP
GPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDS
GNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESE
SSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVP
HEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQY
GEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIG
VCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSY
LESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPI
KWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLE
KGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSIT
EAVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLS
LTPQMVKKGLSGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSSQ
GKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPANARCNFID
DLSTNGLARDINSLTQRYDSETDPAGDPDTDATGDSLEQSLSQVIAAPAT
NKMQHSLHSGGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQ
HHPQAPGPGPPSTQPHHGNNGVLTSAHPITVGALEVMNVKQVVNRYGTLP
KGARIGAYLDSLEDSTEAAPPLPATAPSLPPANGHATPPSARLNPKASPI
PPQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSS
SSPKRSASGLASGVQPALANLEFPPPPLDLPPPPEEFEGGPPPPPPAPES
AVQAIQQHLHAQLPNNGNISNGNGSNNNDSSHNDVSNIAPSVEEASSRFG
VSLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKESAPASHLANGSGI
AVVDPVSLLVTELAESMNLPKSPPQQQQKLTNGNGTGSGFKAQLKKVEPK
KMSAPMPKAEPASTIIDFKAHLRRVDKEKEPAAPAPAPVAVANNANCNTT
GTLNRKEDSSKKFSQAMQKTEIKIDVTNSNVEADAGATGEGDLGKRRSTD
DEEQSHTEGLGSGGQGAADMTQSLYEQKPQIQQKPAVPHKPTKLTIYATP
IAKLTEPASSASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLSDK
LNILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSQHLRSAGSKNVQDN
ERLVAEVGQSLRQISNALNRoooooooooooooooooooooo
>C3
MGAQQGKDRGAHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVNSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGSGSGLSQRSGGHKDARCNPT
VGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASLL
ADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPG
PEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSG
NVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESES
SPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPH
EGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYG
EVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGV
CTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYL
ESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIK
WTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEK
GYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITE
AVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLSL
TPQMVKKGLPGGQSLTPNAHHNDSHQQQASTPMSETGSTSTKLSTFSSQG
KGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPATARCNFIDD
LSTNGLARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIAAPATN
KMQHSLHSGGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQH
HPLAPGPGPPATQPHHGNNGVVASAHPITVGALEVMNVKQVVNRYGTLPK
VARIGAYLDSLEDSTEAAPALPATAPALPPANGHATPPAARINPKASPIP
PQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSS
SPKRNATGAASGVQPALANLEFPPPPLDLPPPPEEFEGGPPPPPPAPESA
VQAIQQHLHAQLPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGV
SLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKDSAPASQLANGSGIA
VVDPVSLLVTELAESMNLPKPPPQQQKLTNGNGTGSGFKAQLKKVEPKKM
SAPIAKAEPANTIIDFKAHLRRVDKEKEPAAPAPAPVAVTNNANCNTTGT
LNRKEDSSKKFSQAMQKTEIKIDVTNSNVEADAGAAGEGDLGKRRSTDDE
EQSHSDGLGSGGQGAADMTQSLYEQKPQIQQKPAVPHKPTKLTIYATPIA
KLAEPASSASSTQISRDSILELVGLLEGSLKHPVNAIAGSQWLQLSDKLN
ILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSQHLRSAGSKNVQDNER
LVAEVGQSLRQISNALNRoooooooooooooooooooooooo
>C4
MGAQQGKDRGGHSGGGGSGAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNP
TVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASL
LADAAELQQHQQDSSGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAP
GPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDS
GNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESE
SSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVP
HEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQY
GEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIG
VCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSY
LESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPI
KWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLE
KGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSIT
EAVEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLS
LTPQMVKKGLPGGQSLTPNAHHTDPHQQQASTPMSETGSTSTKLSTFSSQ
GKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPATARCNFID
DLSTNGFARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIAAPAT
NKMQHSLHSGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQH
HPLAPGPGPPATQPHHGNNGVVTSAHPITVGALEVMNVKQVVNRYGTLPK
GARIGAYLDSLEDSSEAAPALPATAPSLPPANGHATPPAARINPKASPIP
PQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSS
SPKRSATGVASGVQPALANLEFPPPPLDLPPPPEEFEGGPPPPPPAPESA
VQAIQQHLHAQLPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGV
SLRKREPSTDSCSSLGSPPEDLKEKLITEIKASGKDSAPTSHLANGSGIA
VVDPVSQLFTELEESMKLPKPPPQQQKLTNGNGTGSGFKAQLKKVEPKKM
CAPMAKAEPANTIIDFKAHLRRVDKEKEPAAPAPAPVPAAAPVAVTNNAN
CNTTGTLNRKEDSSKKFSQVMQKTEIKIDVTNSNVEADAGAAGEGDLGKR
RSTDDEEQSHSDGLGSGGQGAADMTQSLYEQKPQIQQKPVVPHKPTKLTI
YATPIAKLAEPASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLSD
KLNILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSQHLRSAGSKNVQD
NERLVAEVGQSLRQISNALNRooooooooooooooooooooo
>C5
MGAQQGKDRGAHSGGGGSAAPVSCIGLSSSPVASVSPHCISSSSGVSSAP
LGGGSTLRGSRIKSSSSGVVSGGGSGGGGGGSGSGLSQRSGGHKDPRCNP
SVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSAAASL
LADAAEMQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAP
GPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDS
GNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESE
SSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVP
HEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQY
GEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIG
VCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSY
LESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPI
KWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLE
KGYRMERPPGCPPEVYDLMRQCWQWDAADRPTFKSIHHALEHMFQESSIT
EAVEKQLNANATSASSSTAPSTSGVASGGGATTTTAASGCASSSSATASL
SLTPQMVKKGLPGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSS
QGKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPATARCNFI
DDLSTNGLARDINSLTQRYDSETDPTADPDTDATGDSLEHSLSHVIAAPA
TNKMQQSLHGGGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQ
HPQAPAPAPPPNQLHHGNNGVVTGAQPITVGALEVMNVKRVVNRYGTLPK
VTRIGAYLDSLEDNSDATTAPPAPAPAPPPANGHATPPSARMNPKASPIP
PQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSS
SPKRSGSGVAAGVQPALANLEFPPPPLDLPPPPEEFEGAPPPPPPAPESA
VQAIQQHLHAQVPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGV
SLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKENAPASHVANGSGIA
VVDPGSLLVTELAESMNLPKPPPPQQQQQKLTNGNGSGSGFKAQLKKVEP
KKMSPPMAKAETASTIIDFKAHLRRVDKEKEPPAPAAAPVASQTVTNNAN
CNTTGTLNRKEDGSRKFAQAMQKTEIKIDVTNSNVEAETAAAGEGDLGKR
RSTDDEEQSQSQPEGLGGQVAADMTQSLYEQKPQIQQKPAVPHKPTKLTI
YATPIAKLAEPASSGSASSTQISRESILELVGLLEGSLKHPVNAIAGSQW
LQLSDKLNILHNSCVIFAENGAMPPHSKFQFRELVTRVEAQSRHLRTAGS
KNVQDNERLVAEVGQSLRQISNALNRoooooooooooooooo
>C6
MGAQQGKDRGAHSGGGSSVAPVSCIGLSSSPVASVSPHCISSSSGASSAP
LGGGSTLRGSRIKNSSSGVVSGGGSGGGGGGSGSGGLSQRSGGHKDSRSN
PTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAAS
LLADAAELQQHQQDSGGLGLQGATLGGGHSSTTSVFESAHRWTSKENLLA
PGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSD
SGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRES
ESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSV
PHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQ
YGEVYEAVWKRYNNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLI
GVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMS
YLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFP
IKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKL
EKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSI
TEAVEKQLNANATSASSSAPSTSGVATGGGATSATAASGCASSSSATASL
SLTPQMVKKGLPGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLSTFSS
QGKGNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPATARNNFI
DDLTTNGLSRDINSLTQRYDSETDPTADPDTDATGDSLEQNLSHVIAAPA
NNKMQHSLHSGGGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQH
PQAPAPAPPPTPPHHGNGAVTTAHPITVGALEVMNVKRVVNRYGTLPKVA
RIGAYLDSLEDSSEALPALPATVPAPPPANGHGTPPAARINPKASPIPPQ
QMIRSNSSGGVTMQNNAAASVNKLQRHRTTTEGTMMTFSSFRAGGSSSSP
KRSGSGVGSGAQPALANLEFPPPPLDLPPPPEEFEGIPPPPPPAPESAVQ
AIQQHLHAQLPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGVSL
RKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKESAPAPLLANGSGIAAV
DPVSLLVTELAESMNLPKPSPPQQKLTNGNSSGSGFKAQLKKVEQKKMSP
PMAKAEPANNIIDFKAHLRRVDKEKEPATPAPVAQPVTNNANCNTTGTLN
RKEDSSKKFAQAVQKTEIKIDVTNSNVENAETGAAGEGDLGKRRSTDDEE
PSHPDGLEQGAPDMTQSLYEQKPQIQQKPAVPHKPTKLTIYATPIAKLAE
PASSGSASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLSDKLNIL
HNSCVIFAENGAMPPHSKFQFRELVTRVDAQSQHLRSAGSKNVQDNERLV
AEVGQSLRQISNALNRoooooooooooooooooooooooooo
>C7
MGAQQGKDRGAHSGGGSGAPVSCIGLSSSSSPVASVSPHCISSSSGGSSA
PLGGGSTIRGSRIKSSSGGVASGVNAGGSGSGLSQRSGGHKDAARCNPVG
LNIFTEHNGTKHSSFRGHPGKYHMNLDALLQSRPLPLIPAGSTAASLLAD
AELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGPEE
DDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVG
WVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPG
QRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGH
GLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVY
EAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTR
EPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESR
NYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTA
PEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKGYR
MERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVE
KQLNANATSASSSAPSTSGVATGGGATTTTAASGCPSSSSATASLSLTPQ
MVKKGLPGGQSLAPNAHHNDPHQQPASTPMSETGSSSTKLSTFSSQGKGN
VQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPANARGNFIDDLST
NGLARDINSLTQRYDSETDPTADPDTDATGDSLEQSLSQVIAAPAANKMQ
HSLHGGGGGIAPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQHPQTT
APAPPPTQPHHGNNGVVTSAHPITVGALEVMNVKRVVNRYGTLPKVARIG
AYLDSLEDSSEAAPALPAAAPTPPPANGHATPPGVRINPKTSPIAPQQMI
RSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGGSSSSPKRS
GSGVGSGAQPALANLEFPPPPLDLPPPPEEFEGAPPPPPPAPESAVQAIQ
QHLHAQLPNNGNISNGNGTNNNDSSHNDVSNTAPSVEEASSRFGVSLRKR
EPSTDSCSSLGSPPEDLKEKLITEIKAAGKDSAPTSHLANGSGIAAVDPV
SQLVTELAESMNLPKQTTQQQKLTNGNGSGSGSGFKAQLKKVEPKKMSPP
MAKAEPTSSIIDFKAHLRRVDKEKESATPAPVSGAAPQLVTINANTGTLN
RKEDSSKKFAQAMQKTEIKIDVTNSNVEAEAGAAGDGDLGKRRSTDDEEQ
SHQEGPGSGSGSQGATDMTQSLYEQKPQIQQKPAVPHKPTKLTIYATPIA
KLAEPASSTQISRESILELVGLLEGSLKHPVNAIAGSQWLQLSDKLNILH
NSCVIFAENGAMPPHSKFQFRELVTRVDAQSQHLRSASSKNVQDNERLVA
EVGQSLRQISNALNRooooooooooooooooooooooooooo
>C8
MGAQQGKDRGAHSGGGSVAPVSCIGLSSSSSPVASVSPHCISSSSGTSSA
PLGGGSTLRGSRIKSSSVGVASGVNAVGSGSGLSQRSGGHKDAARCNPTV
GLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSTAASLLA
DAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKENLLAPGP
EEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGN
VGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESS
PGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHE
GHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGE
VYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVC
TREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLE
SRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKW
TAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVYHKLEKG
YRMERPPGCPPEVYDLMRQCWQWDAADRPTFKSIHHALEHMFQESSITEA
VEKQLNANATSASSSAPSTSGVATGGGATTTTAASGCASSSSATASLSLT
PQMVKKGLPGGQSLTPNAHHNDPHQQPASTPMSETGSSSTKLSTFSSQGK
GNVQMRRTTNKQGKQAPAPPKRTSLLSSSRDSTYREEDPANARGNFIDDL
TTNGLARDINSLTQRYDSETDPAADPDTDATGDSLEQSLSQVIAAPATNK
MQHSLHGGGGGGGGIAPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQQ
HPQTSAPPPPATQAHHGNNGVVASAHPITVGALEVMNVKRVVNRYGTLPK
VARIGAYLDSLEDSGEATTAPPPATAPAPPPANGHATPPGARINPKTSPI
APQQMIRSNSSGGVTMQNNAAASLNKLQRHRTTTEGTMMTFSSFRAGNSS
SSPKRSGCGVGPVGAQPALANLEFPPPPLDLPPPPEEFEGAPPPPPPAPE
SAVQAIQQHLHAQLPNNGNVSNGNGTNNNDSSHNDVSNTAPSVEEASSRF
GVSLRKREPSTDSCSSLGSPPEDLKEKLITEIKAAGKESAPASHLANGSG
IAAVDPVSLLVTELAESMNLPKQPQSQPTLPQQQQQKLTNGNGSGTGSGS
GFKAQLKKVEPKKMSPPMAKAEPASSIIDFKAHLRRVDKEKEPSVPAPAP
AAPQLVTNNANTGTLNRKEDSSRKFAQAMQKTEIKIDVTNSNVEADTGAA
GEGDLGKRRSTDDEEQSHQEGPGSGSGSGSGLGGQGPADMTQSLYEQKPQ
IQQKPAVPHKPTKLTIYATPIAKLAEPASSGSASSTQISRESILELVGLL
EGSLKHPVNAIAGSQWLQLSDKLNILHNSCVIFAENGAMPPHSKFQFREL
VTRVEAQSQHLRSAGSKNVQDNERLVAEVGQSLRQISNALNR
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE:  ], CPU=0.00 sec, SCORE=100, Nseq=8, Len=1583 

C1              MGAQQGKDRGAHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C2              MGAQQGKDRGAHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C3              MGAQQGKDRGAHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVNS
C4              MGAQQGKDRGGHSGGGGSGAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C5              MGAQQGKDRGAHSGGGGSAAPVSCIGLSSS--PVASVSPHCISSSSGVSS
C6              MGAQQGKDRGAHSGGGSSVAPVSCIGLSSS--PVASVSPHCISSSSGASS
C7              MGAQQGKDRGAHSGGG-SGAPVSCIGLSSSSSPVASVSPHCISSSSGGSS
C8              MGAQQGKDRGAHSGGG-SVAPVSCIGLSSSSSPVASVSPHCISSSSGTSS
                **********.***** * ***********  *************** .*

C1              APLGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSG-LSQRSGGHKDA-
C2              APLGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSG-LSQRSGGHKDA-
C3              APLGGGSTLRGSRIKSSSSGVASGSGSGGGGG-SGSG-LSQRSGGHKDA-
C4              APLGGGSTLRGSRIKSSSSGVASGSGSGGGGGGSGSG-LSQRSGGHKDA-
C5              APLGGGSTLRGSRIKSSSSGVVSGGGSGGGGGGSGSG-LSQRSGGHKDP-
C6              APLGGGSTLRGSRIKNSSSGVVSGGGSGGGGGGSGSGGLSQRSGGHKDS-
C7              APLGGGSTIRGSRIKSSSGGVASGVNAG----GSGSG-LSQRSGGHKDAA
C8              APLGGGSTLRGSRIKSSSVGVASGVNAV----GSGSG-LSQRSGGHKDAA
                ********:******.** **.** .:      **** **********. 

C1              RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C2              RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C3              RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C4              RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C5              RCNPSVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGSA
C6              RSNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
C7              RCNP-VGLNIFTEHNGTKHSSFRGHPGKYHMNLDALLQSRPLPLIPAGST
C8              RCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQSRPLPHIPAGST
                *.** ****************************:********* *****:

C1              AASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C2              AASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C3              AASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C4              AASLLADAAELQQHQQDSSGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C5              AASLLADAAEMQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C6              AASLLADAAELQQHQQDSGGLGLQGATLGGGHSSTTSVFESAHRWTSKEN
C7              AASLLAD-AELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
C8              AASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSKEN
                ******* **:*******.******::***********************

C1              LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C2              LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C3              LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C4              LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C5              LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C6              LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C7              LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
C8              LLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEA
                **************************************************

C1              HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C2              HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C3              HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C4              HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C5              HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C6              HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C7              HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
C8              HSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLV
                **************************************************

C1              RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C2              RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C3              RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C4              RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C5              RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C6              RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C7              RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
C8              RESESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHH
                **************************************************

C1              HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C2              HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C3              HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C4              HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C5              HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C6              HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C7              HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
C8              HSVPHEGHGLITPLLYPAPKQNKPTVFPLSPEPDEWEICRTDIMMKHKLG
                **************************************************

C1              GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C2              GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C3              GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C4              GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C5              GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C6              GGQYGEVYEAVWKRYNNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C7              GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
C8              GGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLV
                ***************.**********************************

C1              QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C2              QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C3              QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C4              QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C5              QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C6              QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C7              QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
C8              QLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIAS
                **************************************************

C1              GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C2              GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C3              GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C4              GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C5              GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C6              GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C7              GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
C8              GMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGA
                **************************************************

C1              KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVY
C2              KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C3              KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C4              KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C5              KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C6              KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C7              KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
C8              KFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPGIDLTDVY
                ******************************************.*******

C1              HKLDKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C2              HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C3              HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C4              HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C5              HKLEKGYRMERPPGCPPEVYDLMRQCWQWDAADRPTFKSIHHALEHMFQE
C6              HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C7              HKLEKGYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQE
C8              HKLEKGYRMERPPGCPPEVYDLMRQCWQWDAADRPTFKSIHHALEHMFQE
                ***:***************************:******************

C1              SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
C2              SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
C3              SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
C4              SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
C5              SSITEAVEKQLNANATSASSSTAPSTSGVASGGGATTTTAASGCASSSSA
C6              SSITEAVEKQLNANATSASSS-APSTSGVATGGGATSATAASGCASSSSA
C7              SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCPSSSSA
C8              SSITEAVEKQLNANATSASSS-APSTSGVATGGGATTTTAASGCASSSSA
                ********************* ********:*****::******.*****

C1              TASLSLTPQMVKKGLPGGQALTPNAHHNDPHQQQASTPMSETGSTSTKLS
C2              TASLSLTPQMVKKGLSGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLS
C3              TASLSLTPQMVKKGLPGGQSLTPNAHHNDSHQQQASTPMSETGSTSTKLS
C4              TASLSLTPQMVKKGLPGGQSLTPNAHHTDPHQQQASTPMSETGSTSTKLS
C5              TASLSLTPQMVKKGLPGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLS
C6              TASLSLTPQMVKKGLPGGQSLTPNAHHNDPHQQQASTPMSETGSTSTKLS
C7              TASLSLTPQMVKKGLPGGQSLAPNAHHNDPHQQPASTPMSETGSSSTKLS
C8              TASLSLTPQMVKKGLPGGQSLTPNAHHNDPHQQPASTPMSETGSSSTKLS