--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Fri Nov 18 11:17:13 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/27/Bsg-PH/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/27/Bsg-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/27/Bsg-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/27/Bsg-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -2170.24 -2183.51
2 -2170.33 -2182.76
--------------------------------------
TOTAL -2170.28 -2183.20
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/27/Bsg-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/27/Bsg-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/27/Bsg-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.297134 0.000664 0.246131 0.344963 0.296047 1501.00 1501.00 1.000
r(A<->C){all} 0.120280 0.000678 0.069799 0.169424 0.118734 1123.61 1237.80 1.000
r(A<->G){all} 0.238246 0.001178 0.175442 0.306952 0.236394 1063.47 1072.98 1.000
r(A<->T){all} 0.135752 0.000750 0.080535 0.188275 0.134571 985.48 1048.81 1.000
r(C<->G){all} 0.118711 0.000700 0.070955 0.170881 0.116780 1069.80 1095.18 1.000
r(C<->T){all} 0.310982 0.001596 0.236315 0.390550 0.308904 940.34 1087.23 1.000
r(G<->T){all} 0.076030 0.000442 0.034950 0.115326 0.074267 861.13 1068.32 1.000
pi(A){all} 0.279615 0.000219 0.251428 0.308440 0.279645 1156.13 1208.53 1.000
pi(C){all} 0.232717 0.000184 0.206326 0.259287 0.232425 1462.19 1481.59 1.000
pi(G){all} 0.248135 0.000194 0.221326 0.275670 0.248117 1192.66 1243.97 1.001
pi(T){all} 0.239533 0.000200 0.212595 0.267144 0.239139 1116.14 1194.10 1.000
alpha{1,2} 0.615680 0.101155 0.193902 1.264095 0.541247 1378.74 1381.58 1.000
alpha{3} 1.192556 0.339636 0.327455 2.366348 1.074654 1354.67 1396.36 1.000
pinvar{all} 0.137139 0.009702 0.000087 0.324822 0.119344 1243.89 1279.06 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -2058.257957
Model 2: PositiveSelection -2049.661589
Model 0: one-ratio -2091.170808
Model 3: discrete -2049.661589
Model 7: beta -2058.259997
Model 8: beta&w>1 -2049.661589
Model 0 vs 1 65.82570200000009
Model 2 vs 1 17.192735999999968
Additional information for M1 vs M2:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_Bsg-PH)
Pr(w>1) post mean +- SE for w
6 L 1.000** 2.171
7 A 1.000** 2.171
8 S 1.000** 2.171
9 A 1.000** 2.171
10 L 1.000** 2.171
11 S 1.000** 2.171
12 F 1.000** 2.171
13 L 1.000** 2.171
20 Y 1.000** 2.171
34 A 1.000** 2.171
35 E 1.000** 2.171
44 R 1.000** 2.171
45 S 1.000** 2.171
55 G 1.000** 2.171
57 P 1.000** 2.171
58 G 1.000** 2.171
59 V 1.000** 2.171
63 K 1.000** 2.171
66 G 1.000** 2.171
68 A 1.000** 2.171
71 D 1.000** 2.171
73 P 1.000** 2.171
76 R 1.000** 2.171
81 L 1.000** 2.171
83 A 1.000** 2.171
84 D 1.000** 2.171
95 T 1.000** 2.171
96 N 1.000** 2.171
100 K 1.000** 2.171
104 E 1.000** 2.171
105 F 1.000** 2.171
106 D 1.000** 2.171
107 G 1.000** 2.171
108 V 1.000** 2.171
109 S 1.000** 2.171
110 K 1.000** 2.171
111 E 1.000** 2.171
113 E 1.000** 2.171
119 V 1.000** 2.171
139 S 1.000** 2.171
144 K 1.000** 2.171
146 E 1.000** 2.171
148 T 1.000** 2.171
152 A 1.000** 2.171
159 A 1.000** 2.171
163 F 1.000** 2.171
164 I 1.000** 2.171
165 L 1.000** 2.171
167 P 1.000** 2.171
168 N 1.000** 2.171
169 G 1.000** 2.171
178 D 1.000** 2.171
183 D 1.000** 2.171
187 E 1.000** 2.171
191 I 1.000** 2.171
193 R 1.000** 2.171
197 N 1.000** 2.171
198 V 1.000** 2.171
199 Y 1.000** 2.171
200 G 1.000** 2.171
201 G 1.000** 2.171
203 T 1.000** 2.171
205 T 1.000** 2.171
206 P 1.000** 2.171
208 S 1.000** 2.171
210 V 1.000** 2.171
213 V 1.000** 2.171
217 G 1.000** 2.171
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_Bsg-PH)
Pr(w>1) post mean +- SE for w
6 L 0.593 1.868 +- 1.097
7 A 0.805 2.401 +- 0.837
8 S 0.927 2.669 +- 0.696
9 A 0.799 2.388 +- 0.840
10 L 0.566 1.802 +- 1.105
11 S 0.920 2.657 +- 0.721
13 L 0.806 2.403 +- 0.835
20 Y 0.575 1.824 +- 1.103
34 A 0.766 2.315 +- 0.865
35 E 0.748 2.275 +- 0.874
44 R 0.551 1.764 +- 1.108
45 S 0.971* 2.763 +- 0.627
55 G 0.801 2.393 +- 0.843
57 P 0.612 1.915 +- 1.091
66 G 0.761 2.304 +- 0.863
68 A 0.804 2.398 +- 0.837
71 D 0.770 2.325 +- 0.862
73 P 0.600 1.885 +- 1.095
76 R 0.828 2.454 +- 0.822
81 L 0.722 2.186 +- 1.018
83 A 0.944 2.707 +- 0.674
95 T 0.844 2.490 +- 0.807
96 N 0.943 2.703 +- 0.672
100 K 0.981* 2.783 +- 0.603
104 E 0.779 2.344 +- 0.855
105 F 0.786 2.360 +- 0.852
106 D 0.867 2.534 +- 0.764
107 G 0.591 1.864 +- 1.098
108 V 0.749 2.278 +- 0.872
109 S 0.548 1.758 +- 1.109
110 K 0.644 1.999 +- 1.048
111 E 0.933 2.683 +- 0.689
113 E 0.806 2.402 +- 0.836
144 K 0.972* 2.765 +- 0.622
146 E 0.524 1.699 +- 1.113
148 T 0.856 2.514 +- 0.795
159 A 0.926 2.666 +- 0.700
163 F 0.793 2.374 +- 0.844
165 L 0.515 1.676 +- 1.114
167 P 0.654 2.017 +- 1.072
169 G 0.808 2.409 +- 0.834
183 D 0.895 2.597 +- 0.738
193 R 0.802 2.380 +- 0.925
198 V 0.887 2.580 +- 0.747
199 Y 0.808 2.407 +- 0.834
200 G 0.527 1.706 +- 1.112
201 G 0.922 2.658 +- 0.705
203 T 0.893 2.593 +- 0.737
205 T 0.809 2.410 +- 0.834
206 P 0.598 1.879 +- 1.096
208 S 0.764 2.310 +- 0.861
210 V 0.970* 2.761 +- 0.626
213 V 0.510 1.662 +- 1.122
Model 8 vs 7 17.19681600000058
Additional information for M7 vs M8:
Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_Bsg-PH)
Pr(w>1) post mean +- SE for w
6 L 1.000** 2.171
7 A 1.000** 2.171
8 S 1.000** 2.171
9 A 1.000** 2.171
10 L 1.000** 2.171
11 S 1.000** 2.171
12 F 1.000** 2.171
13 L 1.000** 2.171
20 Y 1.000** 2.171
34 A 1.000** 2.171
35 E 1.000** 2.171
44 R 1.000** 2.171
45 S 1.000** 2.171
55 G 1.000** 2.171
57 P 1.000** 2.171
58 G 1.000** 2.171
59 V 1.000** 2.171
63 K 1.000** 2.171
66 G 1.000** 2.171
68 A 1.000** 2.171
71 D 1.000** 2.171
73 P 1.000** 2.171
76 R 1.000** 2.171
81 L 1.000** 2.171
83 A 1.000** 2.171
84 D 1.000** 2.171
95 T 1.000** 2.171
96 N 1.000** 2.171
100 K 1.000** 2.171
104 E 1.000** 2.171
105 F 1.000** 2.171
106 D 1.000** 2.171
107 G 1.000** 2.171
108 V 1.000** 2.171
109 S 1.000** 2.171
110 K 1.000** 2.171
111 E 1.000** 2.171
113 E 1.000** 2.171
119 V 1.000** 2.171
139 S 1.000** 2.171
144 K 1.000** 2.171
146 E 1.000** 2.171
148 T 1.000** 2.171
152 A 1.000** 2.171
159 A 1.000** 2.171
163 F 1.000** 2.171
164 I 1.000** 2.171
165 L 1.000** 2.171
167 P 1.000** 2.171
168 N 1.000** 2.171
169 G 1.000** 2.171
178 D 1.000** 2.171
183 D 1.000** 2.171
187 E 1.000** 2.171
191 I 1.000** 2.171
193 R 1.000** 2.171
197 N 1.000** 2.171
198 V 1.000** 2.171
199 Y 1.000** 2.171
200 G 1.000** 2.171
201 G 1.000** 2.171
203 T 1.000** 2.171
205 T 1.000** 2.171
206 P 1.000** 2.171
208 S 1.000** 2.171
210 V 1.000** 2.171
213 V 1.000** 2.171
217 G 1.000** 2.171
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_melanogaster_Bsg-PH)
Pr(w>1) post mean +- SE for w
6 L 0.667 1.858 +- 1.109
7 A 0.906 2.447 +- 0.691
8 S 0.980* 2.615 +- 0.469
9 A 0.903 2.439 +- 0.698
10 L 0.638 1.789 +- 1.128
11 S 0.969* 2.592 +- 0.516
12 F 0.524 1.510 +- 1.165
13 L 0.908 2.450 +- 0.687
20 Y 0.648 1.812 +- 1.122
34 A 0.878 2.381 +- 0.751
35 E 0.865 2.350 +- 0.775
44 R 0.622 1.749 +- 1.136
45 S 0.993** 2.643 +- 0.419
55 G 0.902 2.437 +- 0.702
57 P 0.686 1.906 +- 1.094
58 G 0.509 1.473 +- 1.166
59 V 0.564 1.607 +- 1.160
63 K 0.534 1.534 +- 1.164
66 G 0.877 2.379 +- 0.750
68 A 0.906 2.446 +- 0.692
71 D 0.881 2.389 +- 0.745
73 P 0.674 1.876 +- 1.104
76 R 0.920 2.479 +- 0.661
81 L 0.797 2.178 +- 0.965
83 A 0.985* 2.626 +- 0.451
95 T 0.930 2.502 +- 0.635
96 N 0.985* 2.627 +- 0.448
100 K 0.996** 2.650 +- 0.404
104 E 0.889 2.406 +- 0.729
105 F 0.893 2.415 +- 0.722
106 D 0.957* 2.563 +- 0.541
107 G 0.665 1.854 +- 1.110
108 V 0.866 2.354 +- 0.772
109 S 0.619 1.742 +- 1.138
110 K 0.730 2.014 +- 1.040
111 E 0.981* 2.619 +- 0.463
113 E 0.907 2.449 +- 0.688
119 V 0.547 1.566 +- 1.163
144 K 0.994** 2.646 +- 0.412
146 E 0.593 1.678 +- 1.149
148 T 0.937 2.518 +- 0.615
152 A 0.555 1.584 +- 1.162
159 A 0.979* 2.613 +- 0.472
163 F 0.899 2.430 +- 0.706
165 L 0.583 1.653 +- 1.153
167 P 0.728 2.009 +- 1.056
169 G 0.909 2.453 +- 0.685
183 D 0.967* 2.588 +- 0.510
187 E 0.556 1.587 +- 1.160
193 R 0.873 2.363 +- 0.819
198 V 0.964* 2.581 +- 0.520
199 Y 0.909 2.453 +- 0.685
200 G 0.596 1.686 +- 1.148
201 G 0.977* 2.610 +- 0.477
203 T 0.967* 2.588 +- 0.509
205 T 0.909 2.454 +- 0.684
206 P 0.672 1.870 +- 1.105
208 S 0.879 2.383 +- 0.747
210 V 0.994** 2.645 +- 0.415
213 V 0.574 1.632 +- 1.159
>C1
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
NVYGGNTTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRR
NKSELEESDTDPQEQ
>C2
MEAKFWLALFHSSSIFLAIYAQSLDKLVPNYDNAMHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLIGRFKLIPDENKFIIDKTDTNDD
GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
NVHGGNTTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRR
NKSELEESDTDPQEQ
>C3
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAKHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTNPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
NVYGGNTTAPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRR
NKSELEESDTDPQEQ
>C4
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
CNVKDSTPGGLLIWRKNGTVVTEVASLRGRFKLIPDENKFIIDKTDTTDD
GEYSCEYSGETKKIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
WTFGNVTLTNDTDRVIVKPDNGVPNAILTLDNVTLDDRGEYKCTGKNAAN
EYAKNTTTLATDATTLRVKSKFAALWPFLGICAEVLILCIIILIYEKRRN
KSELEESDTDPQEQo
>C5
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
WTFANVTLTNGTDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
DAFGGNNTTPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRR
NKSELEESDTDPQEQ
>C6
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNIEHQMKFYDIRHPLVLS
CNVKDTPGVLIWKKNNTDVTQVPSLKGRFKLIEAENKFIIDKTDASDDGL
YSCSINEESRNITVIARVIVRVPSNTAVVEGEKMSVTCSVVGTDPQLSWT
FGNVTLTNSTDRYILKADEDNVPNAILTLDNVTLDDRGDYKCIGRNAAND
YGVNGTNTAPAIDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRR
NKSELEESDTDPQEQ
>C7
MEAKFLAGALSFLSIFLAINAQSLDKLVPNYDNIEHQMKFYDIKTPLVLS
CNVKEDTSSVLIWKKNGTAVTEVPSLKGRFKIIAAENKFIIDKTDVSDDG
DYSCEIDGESKIIKVIARVVVRVPSNTAVVEGEKMSVTCTVVGTAPQLIW
TFGNVTLTNSTDRFVLKPENNVPNAILTLDNVTLQDRGEYKCIGRNAAND
YGVNGTSTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEKRR
NKSELEESDTDPQEQ
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=7, Len=268
C1 MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAEHQMKFYDIRSPLVLS
C2 MEAKFWLALFHSSSIFLAIYAQSLDKLVPNYDNAMHQMKFYDIRSPLVLS
C3 MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAKHQMKFYDIRSPLVLS
C4 MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
C5 MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
C6 MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNIEHQMKFYDIRHPLVLS
C7 MEAKFLAGALSFLSIFLAINAQSLDKLVPNYDNIEHQMKFYDIKTPLVLS
***** . : ****** ************* ********: *****
C1 CNVKDGTPGGVLIWKKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDD
C2 CNVKDGTPGGVLIWKKNGTAVTEVPSLIGRFKLIPDENKFIIDKTDTNDD
C3 CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
C4 CNVKDSTPGGLLIWRKNGTVVTEVASLRGRFKLIPDENKFIIDKTDTTDD
C5 CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
C6 CNVK-DTPG-VLIWKKNNTDVTQVPSLKGRFKLIEAENKFIIDKTDASDD
C7 CNVKEDTSS-VLIWKKNGTAVTEVPSLKGRFKIIAAENKFIIDKTDVSDD
**** .*.. :***:**.* **:*.** ****:* **********..**
C1 GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
C2 GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
C3 GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTNPELT
C4 GEYSCEYSGETKKIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
C5 GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
C6 GLYSCSINEESRNITVIARVIVRVPSNTAVVEGEKMSVTCSVVGTDPQLS
C7 GDYSCEIDGESKIIKVIARVVVRVPSNTAVVEGEKMSVTCTVVGTAPQLI
* ***. . :: * *****:*******************:**** *:*
C1 WTFANVTLTNATDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
C2 WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
C3 WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
C4 WTFGNVTLTNDTDRVIVKPD-NGVPNAILTLDNVTLDDRGEYKCTGKNAA
C5 WTFANVTLTNGTDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
C6 WTFGNVTLTNSTDRYILKADEDNVPNAILTLDNVTLDDRGDYKCIGRNAA
C7 WTFGNVTLTNSTDRFVLKP-ENNVPNAILTLDNVTLQDRGEYKCIGRNAA
***.****** *** ::*. :.********:****:***:*** *:***
C1 NVYGGN--TTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
C2 NVHGGN--TTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
C3 NVYGGN--TTAPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
C4 NEYAKN--TTTLATDATTLRVKSKFAALWPFLGICAEVLILCIIILIYEK
C5 DAFGGN--NTTPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
C6 NDYGVNGTNTAPAIDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
C7 NDYGVNGTSTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
: .. * .*: * * **:***.***************************
C1 RRNKSELEESDTDPQEQ-
C2 RRNKSELEESDTDPQEQ-
C3 RRNKSELEESDTDPQEQ-
C4 RRNKSELEESDTDPQEQo
C5 RRNKSELEESDTDPQEQ-
C6 RRNKSELEESDTDPQEQ-
C7 RRNKSELEESDTDPQEQ-
*****************
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log S [0]
-genepred_score S [0] nsd
-run_name S [0]
-mem_mode S [0] mem
-extend D [1] 1
-extend_mode S [0] very_fast_triplet
-max_n_pair D [0] 10
-seq_name_for_quadruplet S [0] all
-compact S [0] default
-clean S [0] no
-do_self FL [0] 0
-do_normalise D [0] 1000
-template_file S [0]
-setenv S [0] 0
-template_mode S [0]
-flip D [0] 0
-remove_template_file D [0] 0
-profile_template_file S [0]
-in S [0]
-seq S [0]
-aln S [0]
-method_limits S [0]
-method S [0]
-lib S [0]
-profile S [0]
-profile1 S [0]
-profile2 S [0]
-pdb S [0]
-relax_lib D [0] 1
-filter_lib D [0] 0
-shrink_lib D [0] 0
-out_lib W_F [0] no
-out_lib_mode S [0] primary
-lib_only D [0] 0
-outseqweight W_F [0] no
-dpa FL [0] 0
-seq_source S [0] ANY
-cosmetic_penalty D [0] 0
-gapopen D [0] 0
-gapext D [0] 0
-fgapopen D [0] 0
-fgapext D [0] 0
-nomatch D [0] 0
-newtree W_F [0] default
-tree W_F [0] NO
-usetree R_F [0]
-tree_mode S [0] nj
-distance_matrix_mode S [0] ktup
-distance_matrix_sim_mode S [0] idmat_sim1
-quicktree FL [0] 0
-outfile W_F [0] default
-maximise FL [1] 1
-output S [1] score_ascii html score_ascii
-len D [0] 0
-infile R_F [1] /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix S [0] default
-tg_mode D [0] 1
-profile_mode S [0] cw_profile_profile
-profile_comparison S [0] profile
-dp_mode S [0] linked_pair_wise
-ktuple D [0] 1
-ndiag D [0] 0
-diag_threshold D [0] 0
-diag_mode D [0] 0
-sim_matrix S [0] vasiliky
-transform S [0]
-extend_seq FL [0] 0
-outorder S [0] input
-inorder S [0] aligned
-seqnos S [0] off
-case S [0] keep
-cpu D [0] 0
-maxnseq D [0] 1000
-maxlen D [0] -1
-sample_dp D [0] 0
-weight S [0] default
-seq_weight S [0] no
-align FL [1] 1
-mocca FL [0] 0
-domain FL [0] 0
-start D [0] 0
-len D [0] 0
-scale D [0] 0
-mocca_interactive FL [0] 0
-method_evaluate_mode S [0] default
-evaluate_mode S [1] t_coffee_fast
-get_type FL [0] 0
-clean_aln D [0] 0
-clean_threshold D [1] 1
-clean_iteration D [1] 1
-clean_evaluate_mode S [0] t_coffee_fast
-extend_matrix FL [0] 0
-prot_min_sim D [40] 40
-prot_max_sim D [90] 90
-prot_min_cov D [40] 40
-pdb_type S [0] d
-pdb_min_sim D [35] 35
-pdb_max_sim D [100] 100
-pdb_min_cov D [50] 50
-pdb_blast_server W_F [0] EBI
-blast W_F [0]
-blast_server W_F [0] EBI
-pdb_db W_F [0] pdb
-protein_db W_F [0] uniprot
-method_log W_F [0] no
-struc_to_use S [0]
-cache W_F [0] use
-align_pdb_param_file W_F [0] no
-align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble
-external_aligner S [0] NO
-msa_mode S [0] tree
-master S [0] no
-blast_nseq D [0] 0
-lalign_n_top D [0] 10
-iterate D [1] 0
-trim D [0] 0
-split D [0] 0
-trimfile S [0] default
-split D [0] 0
-split_nseq_thres D [0] 0
-split_score_thres D [0] 0
-check_pdb_status D [0] 0
-clean_seq_name D [0] 0
-seq_to_keep S [0]
-dpa_master_aln S [0]
-dpa_maxnseq D [0] 0
-dpa_min_score1 D [0]
-dpa_min_score2 D [0]
-dpa_keep_tmpfile FL [0] 0
-dpa_debug D [0] 0
-multi_core S [0] templates_jobs_relax_msa_evaluate
-n_core D [0] 0
-max_n_proc D [0] 0
-lib_list S [0]
-prune_lib_mode S [0] 5
-tip S [0] none
-rna_lib S [0]
-no_warning D [0] 0
-run_local_script D [0] 0
-plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 7 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 265 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C7 Length 265 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [11760]
Library Relaxation: Multi_proc [72]
Relaxation Summary: [11760]--->[11602]
UN-WEIGHTED MODE: EVERY SEQUENCE WEIGHTS 1
OUTPUT RESULTS
#### File Type= MSA Format= score_ascii Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii
#### File Type= MSA Format= html Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.html
#### File Type= MSA Format= score_ascii Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii
# Command Line: t_coffee_ADOPS -infile /opt/ADOPS/27/Bsg-PH/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln -output score_ascii -special_mode evaluate -evaluate_mode t_coffee_fast [PROGRAM:T-COFFEE]
# T-COFFEE Memory Usage: Current= 29.400 Mb, Max= 30.799 Mb
# Results Produced with T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
# T-COFFEE is available from http://www.tcoffee.org
# Register on: https://groups.google.com/group/tcoffee/
>C1
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
NVYGGN--TTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C2
MEAKFWLALFHSSSIFLAIYAQSLDKLVPNYDNAMHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLIGRFKLIPDENKFIIDKTDTNDD
GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
NVHGGN--TTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C3
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAKHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTNPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
NVYGGN--TTAPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C4
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
CNVKDSTPGGLLIWRKNGTVVTEVASLRGRFKLIPDENKFIIDKTDTTDD
GEYSCEYSGETKKIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
WTFGNVTLTNDTDRVIVKPD-NGVPNAILTLDNVTLDDRGEYKCTGKNAA
NEYAKN--TTTLATDATTLRVKSKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQo
>C5
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
WTFANVTLTNGTDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
DAFGGN--NTTPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C6
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNIEHQMKFYDIRHPLVLS
CNVK-DTPG-VLIWKKNNTDVTQVPSLKGRFKLIEAENKFIIDKTDASDD
GLYSCSINEESRNITVIARVIVRVPSNTAVVEGEKMSVTCSVVGTDPQLS
WTFGNVTLTNSTDRYILKADEDNVPNAILTLDNVTLDDRGDYKCIGRNAA
NDYGVNGTNTAPAIDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C7
MEAKFLAGALSFLSIFLAINAQSLDKLVPNYDNIEHQMKFYDIKTPLVLS
CNVKEDTSS-VLIWKKNGTAVTEVPSLKGRFKIIAAENKFIIDKTDVSDD
GDYSCEIDGESKIIKVIARVVVRVPSNTAVVEGEKMSVTCTVVGTAPQLI
WTFGNVTLTNSTDRFVLKP-ENNVPNAILTLDNVTLQDRGEYKCIGRNAA
NDYGVNGTSTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
FORMAT of file /tmp/tmp6418182139339182766aln Not Supported[FATAL:T-COFFEE]
>C1
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
NVYGGN--TTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C2
MEAKFWLALFHSSSIFLAIYAQSLDKLVPNYDNAMHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLIGRFKLIPDENKFIIDKTDTNDD
GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
NVHGGN--TTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C3
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAKHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTNPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
NVYGGN--TTAPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C4
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
CNVKDSTPGGLLIWRKNGTVVTEVASLRGRFKLIPDENKFIIDKTDTTDD
GEYSCEYSGETKKIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
WTFGNVTLTNDTDRVIVKPD-NGVPNAILTLDNVTLDDRGEYKCTGKNAA
NEYAKN--TTTLATDATTLRVKSKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQo
>C5
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
WTFANVTLTNGTDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
DAFGGN--NTTPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C6
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNIEHQMKFYDIRHPLVLS
CNVK-DTPG-VLIWKKNNTDVTQVPSLKGRFKLIEAENKFIIDKTDASDD
GLYSCSINEESRNITVIARVIVRVPSNTAVVEGEKMSVTCSVVGTDPQLS
WTFGNVTLTNSTDRYILKADEDNVPNAILTLDNVTLDDRGDYKCIGRNAA
NDYGVNGTNTAPAIDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
>C7
MEAKFLAGALSFLSIFLAINAQSLDKLVPNYDNIEHQMKFYDIKTPLVLS
CNVKEDTSS-VLIWKKNGTAVTEVPSLKGRFKIIAAENKFIIDKTDVSDD
GDYSCEIDGESKIIKVIARVVVRVPSNTAVVEGEKMSVTCTVVGTAPQLI
WTFGNVTLTNSTDRFVLKP-ENNVPNAILTLDNVTLQDRGEYKCIGRNAA
NDYGVNGTSTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ-
input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln I:268 S:99 BS:268
# TC_SIMILARITY_MATRIX_FORMAT_01
# SEQ_INDEX C1 0
# SEQ_INDEX C2 1
# SEQ_INDEX C3 2
# SEQ_INDEX C4 3
# SEQ_INDEX C5 4
# SEQ_INDEX C6 5
# SEQ_INDEX C7 6
# PW_SEQ_DISTANCES
BOT 0 1 93.21 C1 C2 93.21
TOP 1 0 93.21 C2 C1 93.21
BOT 0 2 97.36 C1 C3 97.36
TOP 2 0 97.36 C3 C1 97.36
BOT 0 3 88.64 C1 C4 88.64
TOP 3 0 88.64 C4 C1 88.64
BOT 0 4 96.60 C1 C5 96.60
TOP 4 0 96.60 C5 C1 96.60
BOT 0 5 85.93 C1 C6 85.93
TOP 5 0 85.93 C6 C1 85.93
BOT 0 6 86.69 C1 C7 86.69
TOP 6 0 86.69 C7 C1 86.69
BOT 1 2 94.72 C2 C3 94.72
TOP 2 1 94.72 C3 C2 94.72
BOT 1 3 84.47 C2 C4 84.47
TOP 3 1 84.47 C4 C2 84.47
BOT 1 4 91.70 C2 C5 91.70
TOP 4 1 91.70 C5 C2 91.70
BOT 1 5 81.75 C2 C6 81.75
TOP 5 1 81.75 C6 C2 81.75
BOT 1 6 84.03 C2 C7 84.03
TOP 6 1 84.03 C7 C2 84.03
BOT 2 3 87.50 C3 C4 87.50
TOP 3 2 87.50 C4 C3 87.50
BOT 2 4 94.72 C3 C5 94.72
TOP 4 2 94.72 C5 C3 94.72
BOT 2 5 85.55 C3 C6 85.55
TOP 5 2 85.55 C6 C3 85.55
BOT 2 6 87.07 C3 C7 87.07
TOP 6 2 87.07 C7 C3 87.07
BOT 3 4 88.64 C4 C5 88.64
TOP 4 3 88.64 C5 C4 88.64
BOT 3 5 82.82 C4 C6 82.82
TOP 5 3 82.82 C6 C4 82.82
BOT 3 6 82.44 C4 C7 82.44
TOP 6 3 82.44 C7 C4 82.44
BOT 4 5 85.55 C5 C6 85.55
TOP 5 4 85.55 C6 C5 85.55
BOT 4 6 87.07 C5 C7 87.07
TOP 6 4 87.07 C7 C5 87.07
BOT 5 6 87.88 C6 C7 87.88
TOP 6 5 87.88 C7 C6 87.88
AVG 0 C1 * 91.40
AVG 1 C2 * 88.31
AVG 2 C3 * 91.15
AVG 3 C4 * 85.75
AVG 4 C5 * 90.71
AVG 5 C6 * 84.91
AVG 6 C7 * 85.86
TOT TOT * 88.30
CLUSTAL W (1.83) multiple sequence alignment
C1 ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
C2 ATGGAGGCAAAATTCTGGCTAGCGCTCTTTCATTCCTCCTCGATATTTTT
C3 ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
C4 ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
C5 ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
C6 ATGGAGGCGAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
C7 ATGGAGGCAAAATTCTTGGCTGGCGCTCTTTCATTCCTCTCGATATTTTT
********.******* * :. ** .:* * ************
C1 AGCGATTTATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATG
C2 AGCAATTTATGCTCAATCACTTGATAAGTTGGTGCCAAACTATGATAATG
C3 AGCGATTTATGCTCAATCACTTGATAAGTTGGTGCCAAACTATGATAATG
C4 AGCGATTTATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATG
C5 AGCGATTTATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATG
C6 AGCGATTTATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATA
C7 AGCGATTAATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATA
***.***:******************** ********************.
C1 CCGAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGC
C2 CCATGCATCAAATGAAATTTTACGACATCAGATCGCCACTCGTTCTCAGC
C3 CCAAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGC
C4 TCGAACATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGC
C5 TCGAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGC
C6 TCGAGCATCAAATGAAATTTTACGACATCAGACACCCGCTGGTTCTCAGC
C7 TCGAGCATCAAATGAAATTTTACGACATCAAAACGCCGCTGGTTCTCAGC
*.:.*************************.* . **.** *********
C1 TGCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAA
C2 TGCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAA
C3 TGCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAA
C4 TGCAACGTGAAAGACAGTACGCCGGGCGGCCTGCTCATATGGAGAAAGAA
C5 TGCAACGTGAAAGACGGTACGCCAGGCGGCGTGCTCATATGGAAAAAGAA
C6 TGCAACGTGAAA---GACACGCCGGGC---GTGCTTATATGGAAAAAGAA
C7 TGCAACGTGAAAGAAGATACGTCGAGC---GTTCTTATATGGAAAAAGAA
************ .. *** *..** * ** *******.******
C1 CGGCACCGCTGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAA
C2 CGGCACCGCTGTGACGGAGGTACCTTCTCTAATAGGTCGCTTTAAGTTAA
C3 CGGCACCGCTGTGACGGAGGTACCTTCTCTAAGAGGTCGCTTTAAGTTAA
C4 CGGCACCGTTGTGACGGAAGTAGCTTCTCTAAGAGGTCGCTTTAAGTTAA
C5 CGGCACCGCTGTGACGGAGGTACCTTCTCTAAGAGGTCGCTTTAAGTTAA
C6 CAACACCGATGTGACGCAGGTGCCTTCGCTGAAAGGTCGCTTTAAGCTAA
C7 CGGCACCGCTGTGACGGAGGTGCCTTCGCTAAAGGGTCGCTTTAAGATAA
*..***** ******* * **. **** ** * .************ ***
C1 TCGCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGAACGACGAT
C2 TCCCAGACGAGAATAAGTTCATCATCGATAAGACGGATACGAACGACGAT
C3 TCGCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGAACGACGAT
C4 TCCCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGACCGACGAT
C5 TCGCAGACGAGAACAAGTTTATCATCGATAAGACGGATACGAACGACGAT
C6 TCGAAGCCGAGAACAAGTTCATCATCGACAAGACGGACGCATCCGACGAT
C7 TCGCAGCCGAGAATAAGTTCATCATCGACAAGACGGATGTAAGCGATGAT
** .**.****** ***** ******** ******** . .: *** ***
C1 GGCAAATACAGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAAT
C2 GGCAAATACAGTTGCGAGTTCGACGGAGAGTCCAAGGAAATCGAAGTGAT
C3 GGCAAATACAGTTGCGAGTTCGACGGAGAGTCCAAGGAAATCGAAGTGAT
C4 GGCGAATACAGTTGCGAGTACAGTGGAGAGACCAAGAAAATCGAAGTAAT
C5 GGCAAATACAGTTGCGAGTTCGACGGAGTGTCCAAGGAAATCGAAGTGAT
C6 GGTCTTTACAGTTGCTCGATCAACGAAGAGTCCCGGAATATCACAGTGAT
C7 GGCGATTACAGTTGCGAGATCGACGGAGAGTCCAAGATAATCAAAGTGAT
** ::********* .*:: .. *..*:*:**..*.::***..***.**
C1 TGCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
C2 TGCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
C3 TGCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
C4 TGCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
C5 TGCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
C6 TGCCCGCGTTATTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
C7 TGCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGAG
**********.*****.*******************************:*
C1 AAAAGATGTCGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACA
C2 AAAAGATGTCGGTGACCTGCAGTGTTGTGGGTACCAAACCAGAGTTGACA
C3 AAAAGATGTCGGTGACCTGCAGCGTTGTGGGTACCAATCCAGAGTTGACA
C4 AGAAGATGTCGGTGACCTGCAGCGTTGTGGGAACCAAACCACAGTTGACA
C5 AGAAGATGTCGGTGACCTGCAGCGTTGTGGGAACCAAACCTCAGTTGACA
C6 AGAAGATGTCGGTGACCTGCAGCGTTGTTGGTACCGATCCCCAGTTGTCA
C7 AGAAGATGTCGGTGACTTGCACCGTTGTGGGTACCGCACCACAGTTGATA
*.************** **** ***** **:***..:** *****: *
C1 TGGACCTTTGCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCT
C2 TGGACCTTTGCCAATGTAACGCTGACAAACGCCACAGATCGCTTCATCCT
C3 TGGACCTTTGCCAATGTAACGCTGACAAACGCCACAGATCGCTTCATCCT
C4 TGGACCTTTGGCAATGTAACGCTGACAAACGACACAGATCGCGTCATCGT
C5 TGGACCTTTGCCAATGTAACGCTGACAAACGGCACAGATCGCTTCATCCT
C6 TGGACCTTTGGCAATGTAACGCTGACAAACTCCACAGATCGTTACATCCT
C7 TGGACTTTTGGCAATGTAACGCTGACAAACTCAACGGATCGCTTCGTCCT
***** **** ****************** .**.***** :*.* *
C1 CAAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATG
C2 CAAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGAAAATG
C3 CAAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGAAAATG
C4 CAAACCAGAT---AATGGTGTTCCTAACGCCATTCTGACACTGGACAATG
C5 CAAACCAGACGATAATGGTGTTCCCAACGCCATTCTGACACTGGATAATG
C6 CAAGGCGGACGAGGACAATGTCCCCAACGCCATTCTGACATTGGACAATG
C7 CAAACCA---GAAAACAATGTCCCCAACGCCATTCTGACACTGGACAATG
***. *. .* ..*** ** *************** **** ****
C1 TGACATTGGACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCC
C2 TGACATTGGAAGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCC
C3 TGACATTGGAAGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCC
C4 TGACATTGGACGACAGAGGCGAATACAAATGCACTGGAAAAAATGCGGCC
C5 TGACATTGGACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCC
C6 TGACATTGGACGACAGAGGCGACTACAAATGCATTGGACGCAATGCGGCC
C7 TGACATTGCAAGACAGAGGCGAGTACAAATGCATTGGACGCAATGCGGCC
******** *.*********** ********** ****...*********
C1 AATGTCTACGGTGGGAAC------ACCACCACTCCTGCCAGCGACGTCAC
C2 AATGTCCACGGTGGGAAC------ACCACCGCTCCTGCCAGCGACTTCAC
C3 AATGTCTACGGTGGGAAC------ACCACCGCTCCTGCCAGCGACGTCAC
C4 AATGAATACGCTAAGAAC------ACCACTACTCTTGCCACCGACGCCAC
C5 GATGCCTTCGGTGGGAAC------AACACCACTCCTGCCAGCGACTTCAC
C6 AATGACTACGGTGTGAATGGCACCAACACCGCCCCTGCCATCGACGTCAC
C7 AATGACTATGGTGTGAACGGCACCAGCACTGCTCCTGCCAGCGACTTCAC
.*** . : * *. *** * *** .* * ***** **** ***
C1 AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
C2 AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
C3 AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
C4 AACTCTTCGTGTTAAGAGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
C5 AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
C6 AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
C7 AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
**** * *********.*********************************
C1 TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
C2 TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
C3 TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
C4 TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
C5 TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
C6 TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATCTACGAGAAG
C7 TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATCTATGAGAAG
**************************************** ** ******
C1 CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
C2 CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
C3 CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
C4 CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
C5 CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
C6 CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
C7 CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCTCAAGAACA
***************************************** ********
C1 G---
C2 G---
C3 G---
C4 G---
C5 G---
C6 G---
C7 G---
*
>C1
ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATG
CCGAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGC
TGCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAA
CGGCACCGCTGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAA
TCGCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGAACGACGAT
GGCAAATACAGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAAT
TGCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
AAAAGATGTCGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACA
TGGACCTTTGCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCT
CAAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATG
TGACATTGGACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCC
AATGTCTACGGTGGGAAC------ACCACCACTCCTGCCAGCGACGTCAC
AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
G---
>C2
ATGGAGGCAAAATTCTGGCTAGCGCTCTTTCATTCCTCCTCGATATTTTT
AGCAATTTATGCTCAATCACTTGATAAGTTGGTGCCAAACTATGATAATG
CCATGCATCAAATGAAATTTTACGACATCAGATCGCCACTCGTTCTCAGC
TGCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAA
CGGCACCGCTGTGACGGAGGTACCTTCTCTAATAGGTCGCTTTAAGTTAA
TCCCAGACGAGAATAAGTTCATCATCGATAAGACGGATACGAACGACGAT
GGCAAATACAGTTGCGAGTTCGACGGAGAGTCCAAGGAAATCGAAGTGAT
TGCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
AAAAGATGTCGGTGACCTGCAGTGTTGTGGGTACCAAACCAGAGTTGACA
TGGACCTTTGCCAATGTAACGCTGACAAACGCCACAGATCGCTTCATCCT
CAAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGAAAATG
TGACATTGGAAGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCC
AATGTCCACGGTGGGAAC------ACCACCGCTCCTGCCAGCGACTTCAC
AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
G---
>C3
ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGATAAGTTGGTGCCAAACTATGATAATG
CCAAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGC
TGCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAA
CGGCACCGCTGTGACGGAGGTACCTTCTCTAAGAGGTCGCTTTAAGTTAA
TCGCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGAACGACGAT
GGCAAATACAGTTGCGAGTTCGACGGAGAGTCCAAGGAAATCGAAGTGAT
TGCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
AAAAGATGTCGGTGACCTGCAGCGTTGTGGGTACCAATCCAGAGTTGACA
TGGACCTTTGCCAATGTAACGCTGACAAACGCCACAGATCGCTTCATCCT
CAAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGAAAATG
TGACATTGGAAGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCC
AATGTCTACGGTGGGAAC------ACCACCGCTCCTGCCAGCGACGTCAC
AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
G---
>C4
ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATG
TCGAACATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGC
TGCAACGTGAAAGACAGTACGCCGGGCGGCCTGCTCATATGGAGAAAGAA
CGGCACCGTTGTGACGGAAGTAGCTTCTCTAAGAGGTCGCTTTAAGTTAA
TCCCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGACCGACGAT
GGCGAATACAGTTGCGAGTACAGTGGAGAGACCAAGAAAATCGAAGTAAT
TGCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
AGAAGATGTCGGTGACCTGCAGCGTTGTGGGAACCAAACCACAGTTGACA
TGGACCTTTGGCAATGTAACGCTGACAAACGACACAGATCGCGTCATCGT
CAAACCAGAT---AATGGTGTTCCTAACGCCATTCTGACACTGGACAATG
TGACATTGGACGACAGAGGCGAATACAAATGCACTGGAAAAAATGCGGCC
AATGAATACGCTAAGAAC------ACCACTACTCTTGCCACCGACGCCAC
AACTCTTCGTGTTAAGAGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
G---
>C5
ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATG
TCGAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGC
TGCAACGTGAAAGACGGTACGCCAGGCGGCGTGCTCATATGGAAAAAGAA
CGGCACCGCTGTGACGGAGGTACCTTCTCTAAGAGGTCGCTTTAAGTTAA
TCGCAGACGAGAACAAGTTTATCATCGATAAGACGGATACGAACGACGAT
GGCAAATACAGTTGCGAGTTCGACGGAGTGTCCAAGGAAATCGAAGTGAT
TGCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
AGAAGATGTCGGTGACCTGCAGCGTTGTGGGAACCAAACCTCAGTTGACA
TGGACCTTTGCCAATGTAACGCTGACAAACGGCACAGATCGCTTCATCCT
CAAACCAGACGATAATGGTGTTCCCAACGCCATTCTGACACTGGATAATG
TGACATTGGACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCC
GATGCCTTCGGTGGGAAC------AACACCACTCCTGCCAGCGACTTCAC
AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAG
CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
G---
>C6
ATGGAGGCGAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATA
TCGAGCATCAAATGAAATTTTACGACATCAGACACCCGCTGGTTCTCAGC
TGCAACGTGAAA---GACACGCCGGGC---GTGCTTATATGGAAAAAGAA
CAACACCGATGTGACGCAGGTGCCTTCGCTGAAAGGTCGCTTTAAGCTAA
TCGAAGCCGAGAACAAGTTCATCATCGACAAGACGGACGCATCCGACGAT
GGTCTTTACAGTTGCTCGATCAACGAAGAGTCCCGGAATATCACAGTGAT
TGCCCGCGTTATTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTG
AGAAGATGTCGGTGACCTGCAGCGTTGTTGGTACCGATCCCCAGTTGTCA
TGGACCTTTGGCAATGTAACGCTGACAAACTCCACAGATCGTTACATCCT
CAAGGCGGACGAGGACAATGTCCCCAACGCCATTCTGACATTGGACAATG
TGACATTGGACGACAGAGGCGACTACAAATGCATTGGACGCAATGCGGCC
AATGACTACGGTGTGAATGGCACCAACACCGCCCCTGCCATCGACGTCAC
AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATCTACGAGAAG
CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACA
G---
>C7
ATGGAGGCAAAATTCTTGGCTGGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTAATGCTCAATCACTTGATAAGCTGGTGCCAAACTATGATAATA
TCGAGCATCAAATGAAATTTTACGACATCAAAACGCCGCTGGTTCTCAGC
TGCAACGTGAAAGAAGATACGTCGAGC---GTTCTTATATGGAAAAAGAA
CGGCACCGCTGTGACGGAGGTGCCTTCGCTAAAGGGTCGCTTTAAGATAA
TCGCAGCCGAGAATAAGTTCATCATCGACAAGACGGATGTAAGCGATGAT
GGCGATTACAGTTGCGAGATCGACGGAGAGTCCAAGATAATCAAAGTGAT
TGCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGAG
AGAAGATGTCGGTGACTTGCACCGTTGTGGGTACCGCACCACAGTTGATA
TGGACTTTTGGCAATGTAACGCTGACAAACTCAACGGATCGCTTCGTCCT
CAAACCA---GAAAACAATGTCCCCAACGCCATTCTGACACTGGACAATG
TGACATTGCAAGACAGAGGCGAGTACAAATGCATTGGACGCAATGCGGCC
AATGACTATGGTGTGAACGGCACCAGCACTGCTCCTGCCAGCGACTTCAC
AACTGTGCGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCA
TCTGTGCTGAGGTGCTGATTCTGTGCATCATCATTCTCATCTATGAGAAG
CGACGCAACAAGAGCGAACTGGAGGAGAGTGATACTGATCCTCAAGAACA
G---
>C1
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
NVYGGNooTTTPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ
>C2
MEAKFWLALFHSSSIFLAIYAQSLDKLVPNYDNAMHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLIGRFKLIPDENKFIIDKTDTNDD
GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
NVHGGNooTTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ
>C3
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNAKHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGESKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTNPELT
WTFANVTLTNATDRFILKPDDNGVPNAILTLENVTLEDRGEYKCIGRNAA
NVYGGNooTTAPASDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ
>C4
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
CNVKDSTPGGLLIWRKNGTVVTEVASLRGRFKLIPDENKFIIDKTDTTDD
GEYSCEYSGETKKIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
WTFGNVTLTNDTDRVIVKPDoNGVPNAILTLDNVTLDDRGEYKCTGKNAA
NEYAKNooTTTLATDATTLRVKSKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ
>C5
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNVEHQMKFYDIRSPLVLS
CNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKLIADENKFIIDKTDTNDD
GKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLT
WTFANVTLTNGTDRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAA
DAFGGNooNTTPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ
>C6
MEAKFLASALSFLSIFLAIYAQSLDKLVPNYDNIEHQMKFYDIRHPLVLS
CNVKoDTPGoVLIWKKNNTDVTQVPSLKGRFKLIEAENKFIIDKTDASDD
GLYSCSINEESRNITVIARVIVRVPSNTAVVEGEKMSVTCSVVGTDPQLS
WTFGNVTLTNSTDRYILKADEDNVPNAILTLDNVTLDDRGDYKCIGRNAA
NDYGVNGTNTAPAIDVTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ
>C7
MEAKFLAGALSFLSIFLAINAQSLDKLVPNYDNIEHQMKFYDIKTPLVLS
CNVKEDTSSoVLIWKKNGTAVTEVPSLKGRFKIIAAENKFIIDKTDVSDD
GDYSCEIDGESKIIKVIARVVVRVPSNTAVVEGEKMSVTCTVVGTAPQLI
WTFGNVTLTNSTDRFVLKPoENNVPNAILTLDNVTLQDRGEYKCIGRNAA
NDYGVNGTSTAPASDFTTVRVKGKFAALWPFLGICAEVLILCIIILIYEK
RRNKSELEESDTDPQEQ
MrBayes v3.2.2 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/opt/ADOPS/27/Bsg-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 7 taxa and 804 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C2
Taxon 3 -> C3
Taxon 4 -> C4
Taxon 5 -> C5
Taxon 6 -> C6
Taxon 7 -> C7
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1479467318
Setting output file names to "/opt/ADOPS/27/Bsg-PH/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called first_pos
Defining charset called second_pos
Defining charset called third_pos
Defining partition called by_codon
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1198977085
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 8645811969
Seed = 1942543022
Swapseed = 1479467318
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
Gamma shape parameter is exponentially
distributed with parameter (2.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Gamma distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
Gamma shape parameter is exponentially
distributed with parameter (2.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Gamma distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
Gamma shape parameter is exponentially
distributed with parameter (2.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Gamma distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Active parameters:
Partition(s)
Parameters 1 2 3
------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(2.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(2.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:Exponential(10.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
1.06 % Dirichlet(Revmat{all})
1.06 % Slider(Revmat{all})
1.06 % Dirichlet(Pi{all})
1.06 % Slider(Pi{all})
2.13 % Multiplier(Alpha{1,2})
2.13 % Multiplier(Alpha{3})
2.13 % Slider(Pinvar{all})
10.64 % ExtSPR(Tau{all},V{all})
10.64 % ExtTBR(Tau{all},V{all})
10.64 % NNI(Tau{all},V{all})
10.64 % ParsSPR(Tau{all},V{all})
31.91 % Multiplier(V{all})
10.64 % Nodeslider(V{all})
4.26 % TLMultiplier(V{all})
Division 1 has 50 unique site patterns
Division 2 has 48 unique site patterns
Division 3 has 56 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -2721.204680 -- -24.557203
Chain 2 -- -2712.778973 -- -24.557203
Chain 3 -- -2719.642580 -- -24.557203
Chain 4 -- -2712.782896 -- -24.557203
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -2702.795657 -- -24.557203
Chain 2 -- -2713.379331 -- -24.557203
Chain 3 -- -2733.849346 -- -24.557203
Chain 4 -- -2715.609833 -- -24.557203
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-2721.205] (-2712.779) (-2719.643) (-2712.783) * [-2702.796] (-2713.379) (-2733.849) (-2715.610)
500 -- (-2182.707) [-2190.344] (-2190.262) (-2198.518) * [-2186.091] (-2194.796) (-2188.758) (-2193.867) -- 0:00:00
1000 -- (-2171.926) [-2181.752] (-2176.121) (-2186.107) * [-2184.910] (-2188.475) (-2181.308) (-2185.137) -- 0:00:00
1500 -- [-2173.709] (-2185.987) (-2176.852) (-2178.053) * (-2174.797) [-2180.062] (-2178.376) (-2178.212) -- 0:00:00
2000 -- [-2168.576] (-2181.786) (-2174.233) (-2184.224) * (-2169.900) (-2178.796) [-2179.980] (-2171.696) -- 0:00:00
2500 -- (-2173.843) [-2173.893] (-2173.274) (-2186.801) * [-2178.329] (-2180.014) (-2173.265) (-2170.785) -- 0:00:00
3000 -- (-2177.527) (-2173.037) (-2170.759) [-2178.445] * (-2174.205) (-2181.098) [-2175.228] (-2172.480) -- 0:05:32
3500 -- (-2180.337) [-2167.863] (-2172.599) (-2176.393) * (-2174.104) (-2176.635) [-2183.673] (-2175.591) -- 0:04:44
4000 -- (-2175.136) (-2175.598) [-2172.002] (-2174.813) * [-2175.588] (-2176.906) (-2179.594) (-2171.779) -- 0:04:09
4500 -- [-2178.010] (-2189.788) (-2170.297) (-2176.350) * [-2173.009] (-2178.794) (-2172.588) (-2168.663) -- 0:03:41
5000 -- (-2181.168) (-2170.393) [-2166.871] (-2172.107) * (-2172.635) (-2178.054) [-2174.308] (-2177.842) -- 0:03:19
Average standard deviation of split frequencies: 0.026189
5500 -- (-2181.309) (-2169.000) [-2174.077] (-2174.367) * (-2175.554) [-2175.051] (-2173.968) (-2182.135) -- 0:03:00
6000 -- (-2172.046) (-2176.403) (-2171.210) [-2177.502] * (-2179.283) (-2178.656) (-2171.594) [-2181.076] -- 0:05:31
6500 -- [-2167.836] (-2172.637) (-2176.325) (-2172.192) * (-2172.045) (-2180.278) (-2173.035) [-2176.221] -- 0:05:05
7000 -- (-2170.458) (-2177.956) (-2174.987) [-2169.671] * [-2167.347] (-2172.233) (-2182.309) (-2174.559) -- 0:04:43
7500 -- (-2176.479) [-2175.575] (-2171.818) (-2168.630) * (-2173.888) [-2173.540] (-2179.003) (-2175.601) -- 0:04:24
8000 -- [-2169.163] (-2173.829) (-2170.533) (-2170.950) * (-2180.792) [-2172.144] (-2177.339) (-2177.688) -- 0:04:08
8500 -- (-2168.053) (-2179.289) [-2175.225] (-2174.536) * [-2174.432] (-2169.875) (-2173.738) (-2173.777) -- 0:03:53
9000 -- (-2172.195) (-2170.250) [-2170.880] (-2173.467) * (-2170.597) [-2174.124] (-2171.933) (-2183.065) -- 0:03:40
9500 -- [-2174.627] (-2186.648) (-2176.219) (-2176.779) * (-2172.414) (-2180.837) [-2169.385] (-2177.593) -- 0:05:12
10000 -- (-2174.576) (-2170.889) [-2172.751] (-2169.720) * (-2175.144) (-2176.895) (-2178.227) [-2174.815] -- 0:04:57
Average standard deviation of split frequencies: 0.008839
10500 -- (-2170.911) (-2177.715) (-2180.133) [-2172.929] * (-2174.587) (-2177.684) (-2172.449) [-2176.382] -- 0:04:42
11000 -- (-2168.055) (-2176.139) [-2169.476] (-2171.499) * (-2169.290) [-2175.752] (-2168.979) (-2182.567) -- 0:04:29
11500 -- (-2175.144) [-2179.400] (-2175.504) (-2175.800) * (-2176.367) [-2170.201] (-2180.522) (-2181.096) -- 0:04:17
12000 -- [-2172.042] (-2181.109) (-2172.979) (-2175.124) * (-2174.386) [-2170.693] (-2175.914) (-2175.946) -- 0:04:07
12500 -- [-2176.079] (-2168.363) (-2191.329) (-2174.636) * (-2171.842) (-2170.151) [-2167.383] (-2185.818) -- 0:05:16
13000 -- (-2172.248) (-2177.990) [-2175.953] (-2172.072) * (-2173.807) (-2171.557) [-2171.727] (-2177.938) -- 0:05:03
13500 -- (-2176.636) [-2171.644] (-2171.246) (-2172.563) * (-2173.328) (-2174.908) [-2169.394] (-2169.749) -- 0:04:52
14000 -- (-2171.983) (-2176.874) [-2172.101] (-2172.210) * (-2171.701) [-2178.311] (-2175.495) (-2172.511) -- 0:04:41
14500 -- (-2175.403) [-2176.918] (-2178.296) (-2168.584) * (-2171.408) (-2173.732) (-2175.065) [-2175.789] -- 0:04:31
15000 -- (-2179.330) (-2175.981) (-2172.492) [-2171.721] * (-2172.154) (-2175.811) (-2177.618) [-2174.978] -- 0:04:22
Average standard deviation of split frequencies: 0.011785
15500 -- [-2174.110] (-2174.061) (-2179.975) (-2179.191) * (-2178.099) (-2173.551) [-2168.629] (-2167.356) -- 0:05:17
16000 -- (-2172.801) (-2172.478) [-2177.642] (-2171.847) * [-2172.896] (-2173.199) (-2172.513) (-2177.058) -- 0:05:07
16500 -- (-2170.890) (-2179.915) [-2171.863] (-2177.543) * [-2175.978] (-2174.431) (-2170.369) (-2175.265) -- 0:04:58
17000 -- (-2172.599) (-2172.018) (-2174.007) [-2175.856] * (-2184.062) (-2174.679) (-2183.613) [-2169.988] -- 0:04:49
17500 -- [-2171.956] (-2185.116) (-2171.147) (-2175.327) * [-2179.594] (-2170.794) (-2172.148) (-2176.876) -- 0:04:40
18000 -- (-2176.380) (-2178.041) (-2173.500) [-2165.981] * [-2174.741] (-2175.641) (-2176.263) (-2178.923) -- 0:04:32
18500 -- (-2173.234) (-2167.426) (-2181.544) [-2170.961] * (-2176.989) (-2170.430) [-2170.548] (-2179.767) -- 0:04:25
19000 -- [-2174.793] (-2171.684) (-2184.839) (-2172.418) * (-2180.602) (-2174.231) [-2174.132] (-2176.645) -- 0:05:09
19500 -- (-2179.094) [-2172.960] (-2180.012) (-2172.823) * (-2183.263) (-2175.723) [-2173.847] (-2178.096) -- 0:05:01
20000 -- (-2176.516) [-2168.168] (-2178.129) (-2179.616) * (-2173.343) [-2174.845] (-2174.872) (-2182.671) -- 0:04:54
Average standard deviation of split frequencies: 0.007603
20500 -- (-2173.553) (-2169.742) (-2173.706) [-2177.837] * (-2173.974) (-2173.030) [-2176.466] (-2176.330) -- 0:04:46
21000 -- (-2170.989) (-2171.503) [-2173.912] (-2176.078) * [-2175.059] (-2171.701) (-2176.949) (-2179.575) -- 0:04:39
21500 -- (-2177.983) [-2174.579] (-2172.889) (-2178.609) * (-2171.253) (-2175.033) [-2172.155] (-2174.098) -- 0:04:33
22000 -- [-2177.794] (-2170.041) (-2175.867) (-2177.245) * (-2177.710) [-2185.704] (-2172.537) (-2176.744) -- 0:05:11
22500 -- [-2167.074] (-2172.032) (-2177.383) (-2176.290) * (-2178.547) [-2171.014] (-2180.580) (-2171.210) -- 0:05:04
23000 -- [-2176.129] (-2173.191) (-2173.587) (-2174.895) * (-2172.888) (-2173.246) [-2174.227] (-2173.752) -- 0:04:57
23500 -- (-2174.803) [-2171.939] (-2170.580) (-2173.922) * (-2173.603) (-2170.881) [-2177.267] (-2186.980) -- 0:04:50
24000 -- [-2167.779] (-2178.474) (-2172.367) (-2182.270) * [-2173.942] (-2173.114) (-2182.246) (-2175.625) -- 0:04:44
24500 -- [-2176.083] (-2175.996) (-2176.990) (-2189.329) * (-2175.205) (-2178.090) [-2172.718] (-2178.153) -- 0:04:38
25000 -- (-2173.442) (-2176.178) [-2178.249] (-2175.172) * [-2168.122] (-2179.070) (-2182.967) (-2168.229) -- 0:04:33
Average standard deviation of split frequencies: 0.006044
25500 -- (-2172.238) [-2171.648] (-2177.757) (-2184.172) * (-2171.890) [-2170.691] (-2174.112) (-2175.324) -- 0:05:05
26000 -- (-2171.287) (-2176.911) [-2181.765] (-2178.373) * (-2174.296) (-2170.133) (-2176.087) [-2173.314] -- 0:04:59
26500 -- [-2170.173] (-2172.422) (-2172.542) (-2176.081) * (-2172.953) (-2178.851) [-2172.095] (-2172.847) -- 0:04:53
27000 -- (-2177.450) [-2176.027] (-2182.807) (-2178.919) * (-2172.148) (-2183.117) [-2169.693] (-2170.308) -- 0:04:48
27500 -- (-2174.465) (-2186.555) [-2172.573] (-2181.388) * [-2174.403] (-2172.155) (-2176.643) (-2180.333) -- 0:04:42
28000 -- (-2173.077) (-2185.502) [-2174.832] (-2175.674) * [-2170.802] (-2188.276) (-2174.671) (-2176.415) -- 0:04:37
28500 -- [-2174.213] (-2185.649) (-2176.751) (-2178.205) * (-2170.911) (-2187.629) (-2172.349) [-2172.942] -- 0:05:06
29000 -- [-2177.006] (-2179.934) (-2174.691) (-2179.452) * (-2172.222) (-2183.285) (-2174.645) [-2168.705] -- 0:05:01
29500 -- (-2180.682) (-2181.982) [-2173.942] (-2180.799) * (-2179.424) (-2175.728) (-2175.375) [-2177.922] -- 0:04:56
30000 -- (-2177.355) (-2175.189) (-2173.151) [-2179.345] * (-2173.911) (-2176.773) (-2173.409) [-2171.806] -- 0:04:51
Average standard deviation of split frequencies: 0.003074
30500 -- (-2171.688) [-2175.674] (-2170.384) (-2179.808) * (-2173.628) (-2179.307) (-2177.584) [-2174.812] -- 0:04:46
31000 -- [-2171.023] (-2174.388) (-2174.674) (-2171.738) * [-2173.172] (-2177.245) (-2175.050) (-2172.078) -- 0:04:41
31500 -- (-2179.350) (-2175.419) (-2173.829) [-2172.326] * [-2175.667] (-2176.118) (-2180.901) (-2173.936) -- 0:05:07
32000 -- [-2169.929] (-2187.572) (-2177.098) (-2169.960) * (-2175.328) (-2173.039) (-2174.189) [-2176.802] -- 0:05:02
32500 -- (-2177.399) (-2175.244) (-2176.634) [-2176.369] * (-2177.086) [-2174.625] (-2179.028) (-2176.575) -- 0:04:57
33000 -- (-2180.520) [-2181.868] (-2179.965) (-2170.017) * (-2183.383) (-2185.694) [-2180.969] (-2170.024) -- 0:04:53
33500 -- (-2172.591) (-2176.700) [-2170.361] (-2171.101) * (-2176.261) (-2173.603) (-2180.265) [-2168.558] -- 0:04:48
34000 -- (-2171.109) [-2176.406] (-2176.640) (-2175.612) * (-2176.738) (-2172.866) (-2180.333) [-2178.779] -- 0:04:44
34500 -- (-2178.007) [-2173.057] (-2168.524) (-2170.814) * (-2175.358) [-2181.501] (-2187.183) (-2181.673) -- 0:04:39
35000 -- (-2175.452) (-2179.837) [-2173.821] (-2177.330) * (-2172.619) (-2178.903) [-2181.103] (-2172.216) -- 0:05:03
Average standard deviation of split frequencies: 0.002619
