--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Fri Nov 18 11:08:34 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/27/Bsg-PG/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/27/Bsg-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/27/Bsg-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/27/Bsg-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -4718.96 -4727.86
2 -4718.98 -4728.97
--------------------------------------
TOTAL -4718.97 -4728.57
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/27/Bsg-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/27/Bsg-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/27/Bsg-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.285721 0.000475 0.243809 0.327627 0.284329 1249.34 1375.17 1.000
r(A<->C){all} 0.087283 0.000266 0.055482 0.118970 0.086201 854.53 1032.10 1.000
r(A<->G){all} 0.245747 0.000694 0.193607 0.296065 0.244993 1031.72 1092.35 1.000
r(A<->T){all} 0.139949 0.000592 0.093593 0.187977 0.138894 769.33 827.06 1.002
r(C<->G){all} 0.069904 0.000175 0.046729 0.097805 0.068953 912.42 1098.65 1.000
r(C<->T){all} 0.382042 0.001032 0.318412 0.441266 0.380535 984.24 1005.77 1.001
r(G<->T){all} 0.075074 0.000290 0.043379 0.109024 0.073956 1034.45 1077.50 1.000
pi(A){all} 0.250727 0.000082 0.232738 0.267718 0.250451 1223.74 1232.36 1.000
pi(C){all} 0.275577 0.000086 0.257848 0.293553 0.275396 1173.24 1181.13 1.000
pi(G){all} 0.277678 0.000089 0.259603 0.296537 0.277537 1161.65 1261.96 1.000
pi(T){all} 0.196019 0.000069 0.180020 0.212641 0.195904 1145.41 1208.96 1.000
alpha{1,2} 0.178388 0.009938 0.000288 0.357364 0.169554 1097.61 1138.34 1.000
alpha{3} 1.450272 0.405366 0.532836 2.759081 1.315575 1430.66 1450.49 1.000
pinvar{all} 0.142900 0.010677 0.000014 0.335898 0.125535 922.31 1046.27 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -4441.473956
Model 2: PositiveSelection -4440.14205
Model 0: one-ratio -4491.61382
Model 3: discrete -4440.14205
Model 7: beta -4441.577689
Model 8: beta&w>1 -4440.144204
Model 0 vs 1 100.27972799999952
Model 2 vs 1 2.6638119999988703
Model 8 vs 7 2.866969999999128
>C1
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQQLPHQSHKLHKSHLGYGNASLS
GSQPWHPSAGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTILYNPN
PTHPTASATATETSVLLTTAHHHAHHQQQLQQQSQHTLNAFQLPLPPRPN
PGQNERYQTYAPHYVPPVVVSGAGAGAGADPGAGASGEQTTISAATSTRA
MMGGGGGVAGAGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMD
KLVPNYDNAEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKNGTAVTDVP
SLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVIARVVVRVP
SNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFILKPDDNGVP
NAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTVRVKGKFAA
LWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNYDoo
o
>C2
MEAKFWLALFHSSSIFLAIYAQSLANNLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQQQQQLPHQSHKLHKSHLGYGNA
SLSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTIL
FNPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPLP
PRPNPGQNERYQTYAPHYVPPVVVSGAGAGAEPGAGASGEQTTISAATST
RAMMGGGGGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVK
MDKLVPNYDNAMHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKNGTAVTE
VPSLIGRFKLIPDENKFIIDKTDTNDDGKYSCEFDGESKEIEVIARVVVR
VPSNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFILKPDDNG
VPNAILTLENVTLEDRGEYKCIGRNAANVHGGNTTAPASDFTTVRVKGKF
AALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNYD
o
>C3
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQQQQLPHQSHKLHKSHLGYGNAS
LSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTILY
NPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPLPP
RPNPGQNERYQTYAPHYVPPVVVSGAGAGAEPGAGASGEQTTISAATSTR
AMMGGGGGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKM
DKLVPNYDNAKHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKNGTAVTEV
PSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGESKEIEVIARVVVRV
PSNTAVVEGEKMSVTCSVVGTNPELTWTFANVTLTNATDRFILKPDDNGV
PNAILTLENVTLEDRGEYKCIGRNAANVYGGNTTAPASDVTTVRVKGKFA
ALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNYDo
o
>C4
MEAKFLASALSFLSIFLAIYAQSLANDLSKASTELEEPQTIYYGDPVVNL
GQPFSITCIIPITEQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRYSDGYMLHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQQQQQQLPHQSHKLHKSHLGYGN
ASLSASQPWHPSAGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTIL
YNPNPTHPTASATATEASLLLTTAHHHVHHQQQLQQSSQHTLNAFQLPLP
PRPNPGQNERYQTYAPHYVPPVVVSGVGAGVEAVPGAGASGEHTTISAAT
STRAMMGGGGGAAAAGISAGASGQMLGAGGHMLMGGQGHQVHLQHQTLLP
VKMDKLVPNYDNVEHQMKFYDIRSPLVLSCNVKDSTPGGLLIWRKNGTVV
TEVASLRGRFKLIPDENKFIIDKTDTTDDGEYSCEYSGETKKIEVIARVV
VRVPSNTAVVEGEKMSVTCSVVGTKPQLTWTFGNVTLTNDTDRVIVKPDN
GVPNAILTLDNVTLDDRGEYKCTGKNAANEYAKNTTTLATDATTLRVKSK
FAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNY
D
>C5
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYMLHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQQLPHQSHKLHKSHLGFGNASLS
GSQPWHPSAGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTILYNPN
PTHPTASATATEASLLLTTAHHRAHHQQQLQQQSQHTLNAFQLPLPPRPN
SGQNERYQTYAPHYVPPVVVSEAGTGPGAGASGEQTTISAATSTRAMMGG
AGAGISAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMDKLVPNYDN
VEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKNGTAVTEVPSLRGRFKL
IADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEG
EKMSVTCSVVGTKPQLTWTFANVTLTNGTDRFILKPDDNGVPNAILTLDN
VTLDDRGEYKCIGRNAADAFGGNNTTPASDFTTVRVKGKFAALWPFLGIC
AEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNYDoooooooooo
o
>C6
MEAKFLASALSFLSIFLAIYAQSLANDLSEESTKFQVPATIYYGDPNVNL
GQPFSITCIIPINEQIHWLKNGEPITRHNLRHGRDDHAYILSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNHRHGGYMLHVRDSKGAGAGSSEPTESG
YQTIDELTPNSADDFFTRAWLETQQQQQQQQLPHQSHKQHKSHLGYGNTT
LSGSQPWHPSAGGGGIHRVYSATPPDFPPPRLNLLEHTVAPPEPPTILYN
QTHTTASAAATEASLLLTTAHHRSHHQQQLQQQAQHTLNAFQLPLPPRPN
LGQNERYQTYAPHYVPPVVGSGTGAGPVTVGEGEQTTISAATSTKAMMGG
VGFGGGTGAAGGPAGASAPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMDK
LVPNYDNIEHKMKFYDIKFPLVLSCNVKDETPGVLIWKKNNTAVTEVPSL
KGRFKIIAAENRFIIDKTDVHDDGLYSCEYNGESQNITVIARVMVRVPSN
TAVVEGEKMSVTCTVVGTDPQLSWTFGNVTLTNATDRFVLKADDNNVQNA
ILTLDNVTLDDRGEYKCIGRNAANDYGDNSTAPASDFTNVRVKGKFAAVW
PFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNYDoooo
o
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=6, Len=667
C1 MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
C2 MEAKFWLALFHSSSIFLAIYAQSLANNLSKESTEFEESPTIYYGDPVVNL
C3 MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
C4 MEAKFLASALSFLSIFLAIYAQSLANDLSKASTELEEPQTIYYGDPVVNL
C5 MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
C6 MEAKFLASALSFLSIFLAIYAQSLANDLSEESTKFQVPATIYYGDPNVNL
***** : : *************:**: **::: . ******* ***
C1 GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
C2 GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
C3 GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
C4 GQPFSITCIIPITEQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
C5 GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
C6 GQPFSITCIIPINEQIHWLKNGEPITRHNLRHGRDDHAYILSESAIEGEK
************.:************************* **********
C1 HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
C2 HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
C3 HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
C4 HKIEAHLSVRHALKVHEGRYQCNRYSDGYMLHVRDPKGVGAGAGEPTESG
C5 HKIEAHLSVRHALKVHEGRYQCNRRRGSYMLHVRDPKGVGAGAGEPTESG
C6 HKIEAHLSVRHALKVHEGRYQCNHRHGGYMLHVRDSKGAGAGSSEPTESG
***********************: ..*:*****.**.***:.******
C1 YQTIDELTPNSADDFFTRAWLEQQQ----QQQQLPHQSHKLHKSHLGYGN
C2 YQTIDELTPNSADDFFTRAWLEQQQQQQ-QQQQLPHQSHKLHKSHLGYGN
C3 YQTIDELTPNSADDFFTRAWLEQQQQQQ-QQQ-LPHQSHKLHKSHLGYGN
C4 YQTIDELTPNSADDFFTRAWLEQQQQQQQQQQQLPHQSHKLHKSHLGYGN
C5 YQTIDELTPNSADDFFTRAWLEQQQ----QQQQLPHQSHKLHKSHLGFGN
C6 YQTIDELTPNSADDFFTRAWLETQQQQ--QQQQLPHQSHKQHKSHLGYGN
********************** ** *** ******* ******:**
C1 ASLSGSQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
C2 ASLSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
C3 ASLSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
C4 ASLSASQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
C5 ASLSGSQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
C6 TTLSGSQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEHTVAPPEPPTI
::**.************ *********************:**********
C1 LYNPNPTHPTASATATETSVLLTTAHHHAHHQQQLQQQSQHTLNAFQLPL
C2 LFNPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPL
C3 LYNPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPL
C4 LYNPNPTHPTASATATEASLLLTTAHHHVHHQQQLQQSSQHTLNAFQLPL
C5 LYNPNPTHPTASATATEASLLLTTAHHRAHHQQQLQQQSQHTLNAFQLPL
C6 LYN--QTHTTASAAATEASLLLTTAHHRSHHQQQLQQQAQHTLNAFQLPL
*:* **.****:***:*:*******: ********.:***********
C1 PPRPNPGQNERYQTYAPHYVPPVVVSGAGAGAGADPGAGASGEQTTISAA
C2 PPRPNPGQNERYQTYAPHYVPPVVVS--GAGAGAEPGAGASGEQTTISAA
C3 PPRPNPGQNERYQTYAPHYVPPVVVS--GAGAGAEPGAGASGEQTTISAA
C4 PPRPNPGQNERYQTYAPHYVPPVVVSGVGAGVEAVPGAGASGEHTTISAA
C5 PPRPNSGQNERYQTYAPHYVPPVVVS----EAGTGPGAGASGEQTTISAA
C6 PPRPNLGQNERYQTYAPHYVPPVVGS----GTGAGPVTVGEGEQTTISAA
***** ****************** * . : * : ..**:******
C1 TSTRAMMGGG---GGVAGAGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
C2 TSTRAMMGGG---GGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
C3 TSTRAMMGGG---GGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
C4 TSTRAMMGGG---GGAAAAGISAGASGQMLGAGGHMLMGGQGHQVHLQHQ
C5 TSTRAMMGG-------AGAGISAGASGPMLGAGGHMLMGGQGHQVHLQHQ
C6 TSTKAMMGGVGFGGGTGAAGGPAGASAPMLGAGGHMLMGGQGHQVHLQHQ
***:***** ..:* .****. **********************
C1 TLLPVKMDKLVPNYDNAEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
C2 TLLPVKMDKLVPNYDNAMHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
C3 TLLPVKMDKLVPNYDNAKHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
C4 TLLPVKMDKLVPNYDNVEHQMKFYDIRSPLVLSCNVKDSTPGGLLIWRKN
C5 TLLPVKMDKLVPNYDNVEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
C6 TLLPVKMDKLVPNYDNIEHKMKFYDIKFPLVLSCNVKDETPG-VLIWKKN
**************** *:******: ********** *** :***:**
C1 GTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVI
C2 GTAVTEVPSLIGRFKLIPDENKFIIDKTDTNDDGKYSCEFDGESKEIEVI
C3 GTAVTEVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGESKEIEVI
C4 GTVVTEVASLRGRFKLIPDENKFIIDKTDTTDDGEYSCEYSGETKKIEVI
C5 GTAVTEVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVI
C6 NTAVTEVPSLKGRFKIIAAENRFIIDKTDVHDDGLYSCEYNGESQNITVI
.*.**:*.** ****:*. **:*******. *** ****:.* :::* **
C1 ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFIL
C2 ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFIL
C3 ARVVVRVPSNTAVVEGEKMSVTCSVVGTNPELTWTFANVTLTNATDRFIL
C4 ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLTWTFGNVTLTNDTDRVIV
C5 ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLTWTFANVTLTNGTDRFIL
C6 ARVMVRVPSNTAVVEGEKMSVTCTVVGTDPQLSWTFGNVTLTNATDRFVL
***:*******************:****.*:*:***.****** ***.::
C1 KPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTV
C2 KPDDNGVPNAILTLENVTLEDRGEYKCIGRNAANVHGGNTTAPASDFTTV
C3 KPDDNGVPNAILTLENVTLEDRGEYKCIGRNAANVYGGNTTAPASDVTTV
C4 KPD-NGVPNAILTLDNVTLDDRGEYKCTGKNAANEYAKNTTTLATDATTL
C5 KPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAADAFGGNNTTPASDFTTV
C6 KADDNNVQNAILTLDNVTLDDRGEYKCIGRNAANDYGDNSTAPASDFTNV
*.* *.* ******:****:******* *:***: .. *.*: *:* *.:
C1 RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
C2 RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
C3 RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
C4 RVKSKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
C5 RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
C6 RVKGKFAAVWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
***.****:*****************************************
C1 KRRNYDooo--------
C2 KRRNYDo----------
C3 KRRNYDoo---------
C4 KRRNYD-----------
C5 KRRNYDooooooooooo
C6 KRRNYDooooo------
******
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log S [0]
-genepred_score S [0] nsd
-run_name S [0]
-mem_mode S [0] mem
-extend D [1] 1
-extend_mode S [0] very_fast_triplet
-max_n_pair D [0] 10
-seq_name_for_quadruplet S [0] all
-compact S [0] default
-clean S [0] no
-do_self FL [0] 0
-do_normalise D [0] 1000
-template_file S [0]
-setenv S [0] 0
-template_mode S [0]
-flip D [0] 0
-remove_template_file D [0] 0
-profile_template_file S [0]
-in S [0]
-seq S [0]
-aln S [0]
-method_limits S [0]
-method S [0]
-lib S [0]
-profile S [0]
-profile1 S [0]
-profile2 S [0]
-pdb S [0]
-relax_lib D [0] 1
-filter_lib D [0] 0
-shrink_lib D [0] 0
-out_lib W_F [0] no
-out_lib_mode S [0] primary
-lib_only D [0] 0
-outseqweight W_F [0] no
-dpa FL [0] 0
-seq_source S [0] ANY
-cosmetic_penalty D [0] 0
-gapopen D [0] 0
-gapext D [0] 0
-fgapopen D [0] 0
-fgapext D [0] 0
-nomatch D [0] 0
-newtree W_F [0] default
-tree W_F [0] NO
-usetree R_F [0]
-tree_mode S [0] nj
-distance_matrix_mode S [0] ktup
-distance_matrix_sim_mode S [0] idmat_sim1
-quicktree FL [0] 0
-outfile W_F [0] default
-maximise FL [1] 1
-output S [1] score_ascii html score_ascii
-len D [0] 0
-infile R_F [1] /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix S [0] default
-tg_mode D [0] 1
-profile_mode S [0] cw_profile_profile
-profile_comparison S [0] profile
-dp_mode S [0] linked_pair_wise
-ktuple D [0] 1
-ndiag D [0] 0
-diag_threshold D [0] 0
-diag_mode D [0] 0
-sim_matrix S [0] vasiliky
-transform S [0]
-extend_seq FL [0] 0
-outorder S [0] input
-inorder S [0] aligned
-seqnos S [0] off
-case S [0] keep
-cpu D [0] 0
-maxnseq D [0] 1000
-maxlen D [0] -1
-sample_dp D [0] 0
-weight S [0] default
-seq_weight S [0] no
-align FL [1] 1
-mocca FL [0] 0
-domain FL [0] 0
-start D [0] 0
-len D [0] 0
-scale D [0] 0
-mocca_interactive FL [0] 0
-method_evaluate_mode S [0] default
-evaluate_mode S [1] t_coffee_fast
-get_type FL [0] 0
-clean_aln D [0] 0
-clean_threshold D [1] 1
-clean_iteration D [1] 1
-clean_evaluate_mode S [0] t_coffee_fast
-extend_matrix FL [0] 0
-prot_min_sim D [40] 40
-prot_max_sim D [90] 90
-prot_min_cov D [40] 40
-pdb_type S [0] d
-pdb_min_sim D [35] 35
-pdb_max_sim D [100] 100
-pdb_min_cov D [50] 50
-pdb_blast_server W_F [0] EBI
-blast W_F [0]
-blast_server W_F [0] EBI
-pdb_db W_F [0] pdb
-protein_db W_F [0] uniprot
-method_log W_F [0] no
-struc_to_use S [0]
-cache W_F [0] use
-align_pdb_param_file W_F [0] no
-align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble
-external_aligner S [0] NO
-msa_mode S [0] tree
-master S [0] no
-blast_nseq D [0] 0
-lalign_n_top D [0] 10
-iterate D [1] 0
-trim D [0] 0
-split D [0] 0
-trimfile S [0] default
-split D [0] 0
-split_nseq_thres D [0] 0
-split_score_thres D [0] 0
-check_pdb_status D [0] 0
-clean_seq_name D [0] 0
-seq_to_keep S [0]
-dpa_master_aln S [0]
-dpa_maxnseq D [0] 0
-dpa_min_score1 D [0]
-dpa_min_score2 D [0]
-dpa_keep_tmpfile FL [0] 0
-dpa_debug D [0] 0
-multi_core S [0] templates_jobs_relax_msa_evaluate
-n_core D [0] 0
-max_n_proc D [0] 0
-lib_list S [0]
-prune_lib_mode S [0] 5
-tip S [0] none
-rna_lib S [0]
-no_warning D [0] 0
-run_local_script D [0] 0
-plugins S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 6 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 651 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C6 Length 651 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [21390]
Library Relaxation: Multi_proc [72]
Relaxation Summary: [21390]--->[20989]
UN-WEIGHTED MODE: EVERY SEQUENCE WEIGHTS 1
OUTPUT RESULTS
#### File Type= MSA Format= score_ascii Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii
#### File Type= MSA Format= html Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.html
#### File Type= MSA Format= score_ascii Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii
# Command Line: t_coffee_ADOPS -infile /opt/ADOPS/27/Bsg-PG/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln -output score_ascii -special_mode evaluate -evaluate_mode t_coffee_fast [PROGRAM:T-COFFEE]
# T-COFFEE Memory Usage: Current= 29.448 Mb, Max= 31.168 Mb
# Results Produced with T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
# T-COFFEE is available from http://www.tcoffee.org
# Register on: https://groups.google.com/group/tcoffee/
>C1
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQ----QQQQLPHQSHKLHKSHLGYGN
ASLSGSQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATETSVLLTTAHHHAHHQQQLQQQSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVSGAGAGAGADPGAGASGEQTTISAA
TSTRAMMGGG---GGVAGAGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNAEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFIL
KPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDooo--------
>C2
MEAKFWLALFHSSSIFLAIYAQSLANNLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQ-QQQQLPHQSHKLHKSHLGYGN
ASLSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LFNPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVS--GAGAGAEPGAGASGEQTTISAA
TSTRAMMGGG---GGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNAMHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTEVPSLIGRFKLIPDENKFIIDKTDTNDDGKYSCEFDGESKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFIL
KPDDNGVPNAILTLENVTLEDRGEYKCIGRNAANVHGGNTTAPASDFTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDo----------
>C3
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQ-QQQ-LPHQSHKLHKSHLGYGN
ASLSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVS--GAGAGAEPGAGASGEQTTISAA
TSTRAMMGGG---GGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNAKHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTEVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGESKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTNPELTWTFANVTLTNATDRFIL
KPDDNGVPNAILTLENVTLEDRGEYKCIGRNAANVYGGNTTAPASDVTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDoo---------
>C4
MEAKFLASALSFLSIFLAIYAQSLANDLSKASTELEEPQTIYYGDPVVNL
GQPFSITCIIPITEQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRYSDGYMLHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQQQQQQLPHQSHKLHKSHLGYGN
ASLSASQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATEASLLLTTAHHHVHHQQQLQQSSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVSGVGAGVEAVPGAGASGEHTTISAA
TSTRAMMGGG---GGAAAAGISAGASGQMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNVEHQMKFYDIRSPLVLSCNVKDSTPGGLLIWRKN
GTVVTEVASLRGRFKLIPDENKFIIDKTDTTDDGEYSCEYSGETKKIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLTWTFGNVTLTNDTDRVIV
KPD-NGVPNAILTLDNVTLDDRGEYKCTGKNAANEYAKNTTTLATDATTL
RVKSKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYD-----------
>C5
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYMLHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQ----QQQQLPHQSHKLHKSHLGFGN
ASLSGSQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATEASLLLTTAHHRAHHQQQLQQQSQHTLNAFQLPL
PPRPNSGQNERYQTYAPHYVPPVVVS----EAGTGPGAGASGEQTTISAA
TSTRAMMGG-------AGAGISAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNVEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTEVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLTWTFANVTLTNGTDRFIL
KPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAADAFGGNNTTPASDFTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDooooooooooo
>C6
MEAKFLASALSFLSIFLAIYAQSLANDLSEESTKFQVPATIYYGDPNVNL
GQPFSITCIIPINEQIHWLKNGEPITRHNLRHGRDDHAYILSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNHRHGGYMLHVRDSKGAGAGSSEPTESG
YQTIDELTPNSADDFFTRAWLETQQQQ--QQQQLPHQSHKQHKSHLGYGN
TTLSGSQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEHTVAPPEPPTI
LYN--QTHTTASAAATEASLLLTTAHHRSHHQQQLQQQAQHTLNAFQLPL
PPRPNLGQNERYQTYAPHYVPPVVGS----GTGAGPVTVGEGEQTTISAA
TSTKAMMGGVGFGGGTGAAGGPAGASAPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNIEHKMKFYDIKFPLVLSCNVKDETPG-VLIWKKN
NTAVTEVPSLKGRFKIIAAENRFIIDKTDVHDDGLYSCEYNGESQNITVI
ARVMVRVPSNTAVVEGEKMSVTCTVVGTDPQLSWTFGNVTLTNATDRFVL
KADDNNVQNAILTLDNVTLDDRGEYKCIGRNAANDYGDNSTAPASDFTNV
RVKGKFAAVWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDooooo------
FORMAT of file /tmp/tmp2718083522348352741aln Not Supported[FATAL:T-COFFEE]
>C1
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQ----QQQQLPHQSHKLHKSHLGYGN
ASLSGSQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATETSVLLTTAHHHAHHQQQLQQQSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVSGAGAGAGADPGAGASGEQTTISAA
TSTRAMMGGG---GGVAGAGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNAEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFIL
KPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDooo--------
>C2
MEAKFWLALFHSSSIFLAIYAQSLANNLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQ-QQQQLPHQSHKLHKSHLGYGN
ASLSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LFNPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVS--GAGAGAEPGAGASGEQTTISAA
TSTRAMMGGG---GGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNAMHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTEVPSLIGRFKLIPDENKFIIDKTDTNDDGKYSCEFDGESKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFIL
KPDDNGVPNAILTLENVTLEDRGEYKCIGRNAANVHGGNTTAPASDFTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDo----------
>C3
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQ-QQQ-LPHQSHKLHKSHLGYGN
ASLSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVS--GAGAGAEPGAGASGEQTTISAA
TSTRAMMGGG---GGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNAKHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTEVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGESKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTNPELTWTFANVTLTNATDRFIL
KPDDNGVPNAILTLENVTLEDRGEYKCIGRNAANVYGGNTTAPASDVTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDoo---------
>C4
MEAKFLASALSFLSIFLAIYAQSLANDLSKASTELEEPQTIYYGDPVVNL
GQPFSITCIIPITEQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRYSDGYMLHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQQQQQQLPHQSHKLHKSHLGYGN
ASLSASQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATEASLLLTTAHHHVHHQQQLQQSSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVSGVGAGVEAVPGAGASGEHTTISAA
TSTRAMMGGG---GGAAAAGISAGASGQMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNVEHQMKFYDIRSPLVLSCNVKDSTPGGLLIWRKN
GTVVTEVASLRGRFKLIPDENKFIIDKTDTTDDGEYSCEYSGETKKIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLTWTFGNVTLTNDTDRVIV
KPD-NGVPNAILTLDNVTLDDRGEYKCTGKNAANEYAKNTTTLATDATTL
RVKSKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYD-----------
>C5
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYMLHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQ----QQQQLPHQSHKLHKSHLGFGN
ASLSGSQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATEASLLLTTAHHRAHHQQQLQQQSQHTLNAFQLPL
PPRPNSGQNERYQTYAPHYVPPVVVS----EAGTGPGAGASGEQTTISAA
TSTRAMMGG-------AGAGISAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNVEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTEVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLTWTFANVTLTNGTDRFIL
KPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAADAFGGNNTTPASDFTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDooooooooooo
>C6
MEAKFLASALSFLSIFLAIYAQSLANDLSEESTKFQVPATIYYGDPNVNL
GQPFSITCIIPINEQIHWLKNGEPITRHNLRHGRDDHAYILSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNHRHGGYMLHVRDSKGAGAGSSEPTESG
YQTIDELTPNSADDFFTRAWLETQQQQ--QQQQLPHQSHKQHKSHLGYGN
TTLSGSQPWHPSAGGGG-IHRVYSATPPDFPPPRLNLLEHTVAPPEPPTI
LYN--QTHTTASAAATEASLLLTTAHHRSHHQQQLQQQAQHTLNAFQLPL
PPRPNLGQNERYQTYAPHYVPPVVGS----GTGAGPVTVGEGEQTTISAA
TSTKAMMGGVGFGGGTGAAGGPAGASAPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNIEHKMKFYDIKFPLVLSCNVKDETPG-VLIWKKN
NTAVTEVPSLKGRFKIIAAENRFIIDKTDVHDDGLYSCEYNGESQNITVI
ARVMVRVPSNTAVVEGEKMSVTCTVVGTDPQLSWTFGNVTLTNATDRFVL
KADDNNVQNAILTLDNVTLDDRGEYKCIGRNAANDYGDNSTAPASDFTNV
RVKGKFAAVWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYDooooo------
input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln I:667 S:97 BS:667
# TC_SIMILARITY_MATRIX_FORMAT_01
# SEQ_INDEX C1 0
# SEQ_INDEX C2 1
# SEQ_INDEX C3 2
# SEQ_INDEX C4 3
# SEQ_INDEX C5 4
# SEQ_INDEX C6 5
# PW_SEQ_DISTANCES
BOT 0 1 96.45 C1 C2 96.45
TOP 1 0 96.45 C2 C1 96.45
BOT 0 2 98.45 C1 C3 98.45
TOP 2 0 98.45 C3 C1 98.45
BOT 0 3 91.50 C1 C4 91.50
TOP 3 0 91.50 C4 C1 91.50
BOT 0 4 96.89 C1 C5 96.89
TOP 4 0 96.89 C5 C1 96.89
BOT 0 5 86.80 C1 C6 86.80
TOP 5 0 86.80 C6 C1 86.80
BOT 1 2 97.54 C2 C3 97.54
TOP 2 1 97.54 C3 C2 97.54
BOT 1 3 89.66 C2 C4 89.66
TOP 3 1 89.66 C4 C2 89.66
BOT 1 4 94.23 C2 C5 94.23
TOP 4 1 94.23 C5 C2 94.23
BOT 1 5 84.94 C2 C6 84.94
TOP 5 1 84.94 C6 C2 84.94
BOT 2 3 91.19 C3 C4 91.19
TOP 3 2 91.19 C4 C3 91.19
BOT 2 4 95.79 C3 C5 95.79
TOP 4 2 95.79 C5 C3 95.79
BOT 2 5 86.65 C3 C6 86.65
TOP 5 2 86.65 C6 C3 86.65
BOT 3 4 91.71 C4 C5 91.71
TOP 4 3 91.71 C5 C4 91.71
BOT 3 5 84.74 C4 C6 84.74
TOP 5 3 84.74 C6 C4 84.74
BOT 4 5 87.38 C5 C6 87.38
TOP 5 4 87.38 C6 C5 87.38
AVG 0 C1 * 94.02
AVG 1 C2 * 92.56
AVG 2 C3 * 93.92
AVG 3 C4 * 89.76
AVG 4 C5 * 93.20
AVG 5 C6 * 86.10
TOT TOT * 91.59
CLUSTAL W (1.83) multiple sequence alignment
C1 ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
C2 ATGGAGGCAAAATTCTGGCTAGCGCTCTTTCATTCCTCCTCGATATTTTT
C3 ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
C4 ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
C5 ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
C6 ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
**************** * :. ** .:* * ************
C1 AGCGATTTATGCTCAATCACTTGCCAATGACCTGAGCAAGGAGTCCACAG
C2 AGCAATTTATGCTCAATCACTTGCCAACAACCTGAGCAAGGAGTCCACAG
C3 AGCGATTTATGCTCAATCACTTGCCAACGACCTAAGCAAGGAGTCCACAG
C4 AGCGATTTATGCTCAATCACTTGCCAACGACCTGAGCAAGGCGTCCACAG
C5 AGCGATTTATGCTCAATCACTTGCCAACGACCTGAGCAAGGAGTCCACAG
C6 AGCGATTTATGCTCAATCACTTGCCAACGACCTGAGCGAGGAGTCCACAA
***.*********************** .****.***.***.*******.
C1 AGTTCGAGGAGTCGCCGACCATCTACTACGGCGACCCCGTGGTGAACCTG
C2 AGTTCGAGGAGTCGCCGACCATCTACTACGGCGACCCCGTGGTGAACCTG
C3 AGTTCGAGGAGTCGCCGACCATCTACTACGGCGACCCCGTGGTGAACCTG
C4 AGTTAGAGGAGCCGCAGACCATCTACTACGGTGACCCGGTGGTGAACCTG
C5 AGTTCGAGGAGTCGCCGACCATCTACTACGGCGACCCCGTGGTGAACCTG
C6 AGTTCCAGGTGCCGGCGACCATTTACTATGGCGACCCCAATGTAAACCTG
****. ***:* ** .****** ***** ** ***** .: **.******
C1 GGCCAGCCCTTCTCGATCACCTGCATAATTCCGATCACCGATCAGATTCA
C2 GGCCAGCCCTTCTCGATCACCTGCATAATCCCGATCACCGATCAGATTCA
C3 GGCCAGCCCTTCTCGATCACCTGCATAATCCCGATCACCGATCAGATTCA
C4 GGCCAGCCGTTCTCGATCACCTGCATAATCCCGATCACCGAACAGATTCA
C5 GGCCAGCCCTTCTCGATCACCTGCATAATCCCGATCACCGATCAGATTCA
C6 GGCCAGCCCTTCTCGATCACCTGCATTATCCCGATCAACGAGCAGATCCA
******** *****************:** *******.*** ***** **
C1 TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
C2 TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
C3 TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
C4 TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
C5 TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
C6 TTGGCTCAAGAACGGGGAGCCAATTACACGGCACAATCTGCGGCACGGGC
*********************.** **.**********************
C1 GGGATGATCATGCCTACGTTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
C2 GGGATGATCATGCCTATGTTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
C3 GGGATGATCATGCCTACGTTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
C4 GGGATGATCATGCCTACGCTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
C5 GGGATGATCATGCATACGCTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
C6 GGGATGATCATGCCTACATTTTGTCGGAGAGTGCTATTGAGGGTGAGAAG
*************.** . * **** ********:** ************
C1 CACAAGATCGAGGCGCATCTGAGTGTGCGGCATGCGCTCAAGGTGCACGA
C2 CACAAGATCGAGGCGCACCTGAGTGTGCGGCATGCGCTCAAGGTGCACGA
C3 CACAAGATCGAGGCGCACCTGAGTGTGCGGCATGCGCTCAAGGTGCACGA
C4 CACAAGATCGAGGCACACCTGAGTGTGCGACATGCCCTTAAGGTGCACGA
C5 CACAAGATCGAGGCCCACCTGAGTGTGCGGCATGCCCTCAAGGTGCACGA
C6 CACAAGATCGAAGCACACCTGAGCGTGCGGCATGCCCTCAAGGTGCACGA
***********.** ** ***** *****.***** ** ***********
C1 GGGTCGCTACCAGTGCAACCGGCGCCGCGGCAGCTACATTCTGCACGTGC
C2 GGGTCGCTACCAGTGCAACCGGCGACGCGGCAGCTACATTCTGCACGTGC
C3 GGGTCGCTACCAGTGCAACCGGCGACGCGGCAGCTACATTCTGCACGTGC
C4 GGGTCGCTACCAGTGCAACCGGTACAGCGACGGCTACATGCTGCACGTGC
C5 GGGTCGGTACCAGTGCAACCGGCGGCGCGGCAGCTACATGCTGCACGTGC
C6 GGGTCGCTACCAGTGCAACCATCGCCACGGCGGCTACATGTTGCACGTTC
****** *************. . ..**.*.******* ******* *
C1 GGGATCCCAAAGGTGTTGGAGCGGGAGCGGGCGAACCCACCGAGTCCGGC
C2 GGGATCCCAAGGGAGTTGGAGCGGGAGCGGGCGAACCCACCGAGTCCGGC
C3 GGGATCCCAAGGGAGTTGGAGCGGGAGCGGGCGAACCCACCGAGTCCGGC
C4 GGGATCCCAAGGGAGTTGGAGCGGGAGCAGGCGAACCCACCGAGTCCGGC
C5 GGGATCCCAAGGGAGTTGGAGCGGGAGCGGGCGAACCCACCGAATCCGGC
C6 GAGATTCCAAGGGAGCTGGAGCTGGATCGAGTGAACCCACCGAGTCTGGC
*.*** ****.**:* ****** *** *..* ***********.** ***
C1 TATCAAACCATTGACGAGCTGACGCCCAACTCAGCGGATGATTTCTTTAC
C2 TATCAAACCATTGACGAACTGACGCCTAACTCAGCGGATGATTTCTTCAC
C3 TATCAAACCATTGACGAACTGACGCCCAACTCAGCGGATGATTTCTTCAC
C4 TATCAAACCATCGACGAGCTAACGCCCAACTCTGCGGATGATTTCTTTAC
C5 TATCAAACCATCGACGAGCTGACGCCCAACTCTGCGGATGACTTCTTTAC
C6 TATCAAACCATTGACGAGTTGACGCCTAACTCGGCGGATGACTTCTTCAC
*********** *****. *.***** ***** ******** ***** **
C1 ACGAGCGTGGCTGGAGCAGCAGCAA------------CAACAACAACAGT
C2 ACGAGCGTGGCTGGAGCAGCAGCAGCAGCAACAG---CAACAACAACAGT
C3 ACGAGCGTGGCTGGAGCAGCAGCAGCAGCAGCAA---CAACAACAG---T
C4 ACGAGCGTGGCTGGAGCAACAGCAGCAGCAGCAGCAGCAACAACAACAGT
C5 ACGAGCGTGGCTGGAGCAACAGCAG------------CAGCAGCAACAGT
C6 ACGAGCGTGGCTGGAGACGCAGCAACAACAA------CAACAGCAACAGT
****************...*****. **.**.**. *
C1 TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTACGGAAAT
C2 TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTACGGAAAT
C3 TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTACGGAAAT
C4 TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTACGGAAAT
C5 TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTTCGGAAAT
C6 TGCCCCATCAGTCGCACAAGCAGCACAAGTCGCATTTGGGTTATGGAAAC
******* *************:****************** *: *****
C1 GCCAGCCTGTCCGGGTCTCAGCCCTGGCATCCGTCAGCCGGCGGTGGCGG
C2 GCCAGTCTGTCCGGGTCTCAGCCCTGGCATCCGTCGGCTGGCGGAGGCGG
C3 GCCAGTCTGTCCGGGTCTCAGCCCTGGCATCCGTCGGCCGGCGGTGGCGG
C4 GCCAGTCTGTCTGCGTCTCAGCCGTGGCATCCGTCGGCCGGCGGAGGCGG
C5 GCCAGTCTGTCTGGGTCTCAGCCCTGGCATCCGTCGGCCGGCGGAGGCGG
C6 ACCACTTTGTCCGGCTCTCAGCCGTGGCATCCATCGGCTGGTGGAGGGGG
.*** **** * ******** ********.**.** ** **:** **
C1 T---ATCCACCGCGTTTACTCGGCCACACCGCCCGATTTTCCACCTCCGC
C2 CGGTATCCACCGCGTTTACTCGGCCACACCGCCCGATTTTCCACCTCCGC
C3 CGGTATCCACCGCGTTTACTCGGCCACACCGCCCGATTTTCCACCTCCGC
C4 T---ATCCACCGCGTTTACTCGGCGACACCGCCCGATTTTCCACCCCCAC
C5 T---ATCCACCGCGTTTACTCGGCCACACCGCCTGACTTTCCACCCCCGC
C6 G---ATCCACCGCGTTTACTCGGCCACACCGCCCGACTTCCCACCACCGC
******************** ******** ** ** ***** **.*
C1 GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
C2 GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
C3 GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
C4 GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
C5 GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
C6 GCCTCAATCTGCTGGAGCACACGGTGGCGCCACCGGAGCCACCAACTATA
**** ************** ***********.**.********.** ***
C1 CTGTACAATCCCAATCCGACGCATCCCACTGCCAGCGCCACTGCCACGGA
C2 CTGTTCAATCCCAATCCGACGCATCCCACTGCCAGCGCCACTGCCACGGA
C3 CTGTACAATCCCAATCCGACGCATCCCACTGCCAGCGCCACTGCCACGGA
C4 CTGTACAATCCCAATCCGACGCATCCCACTGCCAGCGCCACTGCCACGGA
C5 CTGTACAATCCCAATCCGACGCACCCCACTGCCAGCGCCACTGCCACGGA
C6 CTATACAAT------CAGACGCATACCACTGCCAGCGCCGCTGCCACGGA
**.*:**** *.****** .**************.**********
C1 GACCAGCGTGCTCCTGACGACGGCGCACCACCATGCCCACCATCAGCAGC
C2 GACCAGCGTGCTCCTGACGACGGCGCACCACCATGTCCACCATCAGCAGC
C3 GACCAGCGTGCTCCTGACGACGGCGCACCACCATGTCCACCATCAGCAGC
C4 GGCCAGCCTGCTCCTGACGACGGCGCACCACCATGTTCACCACCAGCAGC
C5 GGCCAGTCTGCTCCTGACGACGGCGCACCACCGTGCCCACCACCAGCAGC
C6 GGCCAGCCTGCTCCTGACGACGGCGCACCACCGTTCCCACCATCAGCAGC
*.**** ************************.* ***** *******
C1 AGCTGCAGCAGCAGTCGCAACACACGCTGAACGCCTTCCAGCTGCCACTG
C2 AGCTGCAGCAGCAGTCGCAGCACACGCTGAACGCCTTCCAGCTGCCACTG
C3 AGCTGCAGCAGCAGTCGCAGCACACGCTGAACGCCTTCCAGCTGCCACTG
C4 AGTTGCAGCAGTCGTCGCAGCACACTCTGAACGCCTTCCAGCTGCCACTG
C5 AGTTGCAGCAGCAATCGCAGCACACGCTGAACGCCTTCCAGCTGCCACTG
C6 AGTTGCAGCAACAGGCGCAGCACACGTTGAATGCCTTCCAGTTGCCACTG
** *******. .. ****.***** **** ********* ********
C1 CCGCCGCGACCCAATCCCGGCCAGAATGAGCGATACCAGACCTATGCACC
C2 CCGCCGCGACCCAATCCCGGCCAGAATGAGCGATACCAGACCTATGCACC
C3 CCGCCGCGACCCAATCCCGGCCAGAATGAGCGATACCAGACCTATGCACC
C4 CCGCCGCGACCCAATCCCGGCCAGAATGAGCGATACCAGACCTATGCACC
C5 CCGCCGCGACCCAATTCCGGCCAGAATGAGCGATACCAGACCTATGCACC
C6 CCGCCGCGACCCAATCTTGGCCAGAATGAGCGTTACCAGACCTATGCACC
*************** **************:*****************
C1 GCACTATGTGCCACCAGTGGTGGTATCGGGAGCGGGCGCGGGCGCAGGCG
C2 GCACTATGTGCCACCAGTAGTGGTATCG------GGAGCGGGCGCAGGCG
C3 GCACTATGTGCCACCAGTGGTGGTATCG------GGAGCGGGCGCAGGCG
C4 GCACTATGTGCCCCCAGTGGTGGTATCTGGAGTGGGAGCGGGAGTGGAAG
C5 GCACTATGTGCCCCCAGTGGTGGTATCA------------GAAGCGGGAA
C6 GCACTATGTTCCGCCAGTGGTGGGATCA------------GGGACAGGAG
********* ** *****.**** *** *. . .*...
C1 CGGACCCGGGAGCAGGAGCATCAGGAGAGCAGACCACCATTTCAGCAGCC
C2 CGGAACCGGGAGCAGGAGCATCAGGAGAGCAGACCACCATTTCAGCAGCC
C3 CGGAACCGGGAGCAGGAGCATCAGGAGAGCAGACCACCATTTCAGCAGCC
C4 CGGTACCGGGAGCAGGAGCATCAGGAGAGCACACCACCATTTCAGCAGCC
C5 CGGGACCAGGAGCAGGAGCATCAGGAGAGCAGACCACCATTTCAGCAGCC
C6 CAGGACCAGTTACAGTCGGTGAAGGAGAACAGACCACCATTTCAGCAGCC
*.* .**.* :.*** .* : .******.** ******************
C1 ACCAGCACAAGGGCCATGATGGGTGGCGGT---------GGTGGCGTTGC
C2 ACCAGCACAAGGGCCATGATGGGTGGCGGT---------GGTGGTGTTGC
C3 ACTAGCACAAGGGCCATGATGGGTGGCGGT---------GGTGGTGTTGC
C4 ACCAGCACAAGGGCCATGATGGGTGGCGGT---------GGTGGCGCTGC
C5 ACCAGCACAAGGGCCATGATGGGTGGT---------------------GC
C6 ACTAGCACAAAGGCCATGATGGGTGGAGTTGGTTTTGGTGGTGGCACCGG
** *******.*************** *
C1 TGGTGCGGGCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCG
C2 TGGTTCGGGCTTTTCCGCGGGCGCCAGTGGCCCTATGCTGGGTGCTGGCG
C3 TGGTTCGGGCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCG
C4 TGCTGCGGGCATTTCTGCGGGCGCGAGTGGCCAAATGCTGGGTGCTGGCG
C5 TGGTGCGGGCATTTCTGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCG
C6 TGCTGCGGGAGGTCCTGCGGGTGCCAGTGCCCCAATGCTGGGTGCTGGAG
** * ****. * * ***** ** **** **.:**************.*
C1 GTCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
C2 GTCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
C3 GTCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
C4 GCCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
C5 GCCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
C6 GCCATATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
* ** *********************************************
C1 ACGCTCTTGCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGC
C2 ACGCTCTTGCCCGTCAAGATGGATAAGTTGGTGCCAAACTATGATAATGC
C3 ACGCTCTTGCCCGTCAAGATGGATAAGTTGGTGCCAAACTATGATAATGC
C4 ACGCTCTTGCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGT
C5 ACGCTCTTGCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGT
C6 ACGCTCTTGCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATAT
*************************** ********************.
C1 CGAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCT
C2 CATGCATCAAATGAAATTTTACGACATCAGATCGCCACTCGTTCTCAGCT
C3 CAAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCT
C4 CGAACATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCT
C5 CGAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCT
C6 CGAGCATAAAATGAAATTTTACGACATCAAATTTCCGCTGGTTCTCAGCT
*.:.***.*********************.** **.** **********
C1 GCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAAC
C2 GCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAAC
C3 GCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAAC
C4 GCAACGTGAAAGACAGTACGCCGGGCGGCCTGCTCATATGGAGAAAGAAC
C5 GCAACGTGAAAGACGGTACGCCAGGCGGCGTGCTCATATGGAAAAAGAAC
C6 GCAACGTGAAAGACGAAACGCCGGGC---GTACTCATATGGAAAAAGAAC
**************..:*****.*** *.**********.*******
C1 GGCACCGCTGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAAT
C2 GGCACCGCTGTGACGGAGGTACCTTCTCTAATAGGTCGCTTTAAGTTAAT
C3 GGCACCGCTGTGACGGAGGTACCTTCTCTAAGAGGTCGCTTTAAGTTAAT
C4 GGCACCGTTGTGACGGAAGTAGCTTCTCTAAGAGGTCGCTTTAAGTTAAT
C5 GGCACCGCTGTGACGGAGGTACCTTCTCTAAGAGGTCGCTTTAAGTTAAT
C6 AACACCGCTGTGACGGAGGTGCCTTCCCTGAAAGGTCGCTTTAAGATAAT
..***** ********* **. **** ** * *************:****
C1 CGCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATG
C2 CCCAGACGAGAATAAGTTCATCATCGATAAGACGGATACGAACGACGATG
C3 CGCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATG
C4 CCCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGACCGACGATG
C5 CGCAGACGAGAACAAGTTTATCATCGATAAGACGGATACGAACGACGATG
C6 CGCAGCTGAGAATAGGTTCATCATCGATAAAACGGACGTGCACGACGATG
* ***. ***** *.*** ***********.***** . *..********
C1 GCAAATACAGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAATT
C2 GCAAATACAGTTGCGAGTTCGACGGAGAGTCCAAGGAAATCGAAGTGATT
C3 GCAAATACAGTTGCGAGTTCGACGGAGAGTCCAAGGAAATCGAAGTGATT
C4 GCGAATACAGTTGCGAGTACAGTGGAGAGACCAAGAAAATCGAAGTAATT
C5 GCAAATACAGTTGCGAGTTCGACGGAGTGTCCAAGGAAATCGAAGTGATT
C6 GCTTATACAGTTGCGAGTACAACGGAGAGTCCCAGAATATCACAGTGATT
** :**************: .. **.*:*:**.**.*:***..***.***
C1 GCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
C2 GCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
C3 GCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
C4 GCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
C5 GCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
C6 GCCCGCGTTATGGTAAGAGTGCCTTCAAATACCGCTGTTGTGGAGGGTGA
*********.* ***.****************.** **************
C1 AAAGATGTCGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACAT
C2 AAAGATGTCGGTGACCTGCAGTGTTGTGGGTACCAAACCAGAGTTGACAT
C3 AAAGATGTCGGTGACCTGCAGCGTTGTGGGTACCAATCCAGAGTTGACAT
C4 GAAGATGTCGGTGACCTGCAGCGTTGTGGGAACCAAACCACAGTTGACAT
C5 GAAGATGTCGGTGACCTGCAGCGTTGTGGGAACCAAACCTCAGTTGACAT
C6 GAAGATGTCGGTGACCTGCACCGTCGTGGGAACTGACCCCCAGTTGTCAT
.******************* ** *****:** .* ** *****:***
C1 GGACCTTTGCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCTC
C2 GGACCTTTGCCAATGTAACGCTGACAAACGCCACAGATCGCTTCATCCTC
C3 GGACCTTTGCCAATGTAACGCTGACAAACGCCACAGATCGCTTCATCCTC
C4 GGACCTTTGGCAATGTAACGCTGACAAACGACACAGATCGCGTCATCGTC
C5 GGACCTTTGCCAATGTAACGCTGACAAACGGCACAGATCGCTTCATCCTC
C6 GGACCTTTGGCAATGTAACGCTGACAAACGCCACAGATCGCTTCGTCCTG
********* ****************** * ********** **.* *
C1 AAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATGT
C2 AAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGAAAATGT
C3 AAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGAAAATGT
C4 AAACCAGAT---AATGGTGTTCCTAACGCCATTCTGACACTGGACAATGT
C5 AAACCAGACGATAATGGTGTTCCCAACGCCATTCTGACACTGGATAATGT
C6 AAAGCGGATGATAACAATGTCCAGAACGCCATCCTGACACTGGACAATGT
*** *.** ** ..*** *. ******** *********** *****
C1 GACATTGGACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCA
C2 GACATTGGAAGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCA
C3 GACATTGGAAGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCA
C4 GACATTGGACGACAGAGGCGAATACAAATGCACTGGAAAAAATGCGGCCA
C5 GACATTGGACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCG
C6 GACATTGGACGACAGAGGCGAGTACAAATGCATTGGACGCAATGCGGCCA
*********.***********.********** ****...*********.
C1 ATGTCTACGGTGGGAACACCACCACTCCTGCCAGCGACGTCACAACTGTG
C2 ATGTCCACGGTGGGAACACCACCGCTCCTGCCAGCGACTTCACAACTGTG
C3 ATGTCTACGGTGGGAACACCACCGCTCCTGCCAGCGACGTCACAACTGTG
C4 ATGAATACGCTAAGAACACCACTACTCTTGCCACCGACGCCACAACTCTT
C5 ATGCCTTCGGTGGGAACAACACCACTCCTGCCAGCGACTTCACAACTGTG
C6 ATGACTATGGTGATAACTCCACCGCTCCTGCCAGTGACTTCACAAACGTG
*** . : * *.. ***:.*** .*** ***** *** *****. *
C1 CGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
C2 CGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
C3 CGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
C4 CGTGTTAAGAGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
C5 CGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
C6 CGTGTTAAGGGCAAATTTGCCGCCGTGTGGCCTTTCCTGGGCATCTGTGC
*********.************** *************************
C1 TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
C2 TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
C3 TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
C4 TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
C5 TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
C6 TGAGGTGCTGATTCTGTGCATCATCATTCTCATCTATGAGAAGCGACGCA
********************************* ****************
C1 ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
C2 ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
C3 ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
C4 ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
C5 ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
C6 ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
**************************************************
C1 AAAAGGAGAAATTATGAT--------------------------------
C2 AAAAGGAGAAATTATGAT--------------------------------
C3 AAAAGGAGAAATTATGAT--------------------------------
C4 AAAAGGAGAAATTATGAT--------------------------------
C5 AAAAGGAGAAATTATGAT--------------------------------
C6 AAAAGGAGAAATTATGAT--------------------------------
******************
C1 -
C2 -
C3 -
C4 -
C5 -
C6 -
>C1
ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGCCAATGACCTGAGCAAGGAGTCCACAG
AGTTCGAGGAGTCGCCGACCATCTACTACGGCGACCCCGTGGTGAACCTG
GGCCAGCCCTTCTCGATCACCTGCATAATTCCGATCACCGATCAGATTCA
TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
GGGATGATCATGCCTACGTTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
CACAAGATCGAGGCGCATCTGAGTGTGCGGCATGCGCTCAAGGTGCACGA
GGGTCGCTACCAGTGCAACCGGCGCCGCGGCAGCTACATTCTGCACGTGC
GGGATCCCAAAGGTGTTGGAGCGGGAGCGGGCGAACCCACCGAGTCCGGC
TATCAAACCATTGACGAGCTGACGCCCAACTCAGCGGATGATTTCTTTAC
ACGAGCGTGGCTGGAGCAGCAGCAA------------CAACAACAACAGT
TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTACGGAAAT
GCCAGCCTGTCCGGGTCTCAGCCCTGGCATCCGTCAGCCGGCGGTGGCGG
T---ATCCACCGCGTTTACTCGGCCACACCGCCCGATTTTCCACCTCCGC
GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
CTGTACAATCCCAATCCGACGCATCCCACTGCCAGCGCCACTGCCACGGA
GACCAGCGTGCTCCTGACGACGGCGCACCACCATGCCCACCATCAGCAGC
AGCTGCAGCAGCAGTCGCAACACACGCTGAACGCCTTCCAGCTGCCACTG
CCGCCGCGACCCAATCCCGGCCAGAATGAGCGATACCAGACCTATGCACC
GCACTATGTGCCACCAGTGGTGGTATCGGGAGCGGGCGCGGGCGCAGGCG
CGGACCCGGGAGCAGGAGCATCAGGAGAGCAGACCACCATTTCAGCAGCC
ACCAGCACAAGGGCCATGATGGGTGGCGGT---------GGTGGCGTTGC
TGGTGCGGGCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCG
GTCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
ACGCTCTTGCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGC
CGAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCT
GCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAAC
GGCACCGCTGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAAT
CGCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATG
GCAAATACAGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAATT
GCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
AAAGATGTCGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACAT
GGACCTTTGCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCTC
AAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATGT
GACATTGGACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCA
ATGTCTACGGTGGGAACACCACCACTCCTGCCAGCGACGTCACAACTGTG
CGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
AAAAGGAGAAATTATGAT--------------------------------
-
>C2
ATGGAGGCAAAATTCTGGCTAGCGCTCTTTCATTCCTCCTCGATATTTTT
AGCAATTTATGCTCAATCACTTGCCAACAACCTGAGCAAGGAGTCCACAG
AGTTCGAGGAGTCGCCGACCATCTACTACGGCGACCCCGTGGTGAACCTG
GGCCAGCCCTTCTCGATCACCTGCATAATCCCGATCACCGATCAGATTCA
TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
GGGATGATCATGCCTATGTTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
CACAAGATCGAGGCGCACCTGAGTGTGCGGCATGCGCTCAAGGTGCACGA
GGGTCGCTACCAGTGCAACCGGCGACGCGGCAGCTACATTCTGCACGTGC
GGGATCCCAAGGGAGTTGGAGCGGGAGCGGGCGAACCCACCGAGTCCGGC
TATCAAACCATTGACGAACTGACGCCTAACTCAGCGGATGATTTCTTCAC
ACGAGCGTGGCTGGAGCAGCAGCAGCAGCAACAG---CAACAACAACAGT
TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTACGGAAAT
GCCAGTCTGTCCGGGTCTCAGCCCTGGCATCCGTCGGCTGGCGGAGGCGG
CGGTATCCACCGCGTTTACTCGGCCACACCGCCCGATTTTCCACCTCCGC
GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
CTGTTCAATCCCAATCCGACGCATCCCACTGCCAGCGCCACTGCCACGGA
GACCAGCGTGCTCCTGACGACGGCGCACCACCATGTCCACCATCAGCAGC
AGCTGCAGCAGCAGTCGCAGCACACGCTGAACGCCTTCCAGCTGCCACTG
CCGCCGCGACCCAATCCCGGCCAGAATGAGCGATACCAGACCTATGCACC
GCACTATGTGCCACCAGTAGTGGTATCG------GGAGCGGGCGCAGGCG
CGGAACCGGGAGCAGGAGCATCAGGAGAGCAGACCACCATTTCAGCAGCC
ACCAGCACAAGGGCCATGATGGGTGGCGGT---------GGTGGTGTTGC
TGGTTCGGGCTTTTCCGCGGGCGCCAGTGGCCCTATGCTGGGTGCTGGCG
GTCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
ACGCTCTTGCCCGTCAAGATGGATAAGTTGGTGCCAAACTATGATAATGC
CATGCATCAAATGAAATTTTACGACATCAGATCGCCACTCGTTCTCAGCT
GCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAAC
GGCACCGCTGTGACGGAGGTACCTTCTCTAATAGGTCGCTTTAAGTTAAT
CCCAGACGAGAATAAGTTCATCATCGATAAGACGGATACGAACGACGATG
GCAAATACAGTTGCGAGTTCGACGGAGAGTCCAAGGAAATCGAAGTGATT
GCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
AAAGATGTCGGTGACCTGCAGTGTTGTGGGTACCAAACCAGAGTTGACAT
GGACCTTTGCCAATGTAACGCTGACAAACGCCACAGATCGCTTCATCCTC
AAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGAAAATGT
GACATTGGAAGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCA
ATGTCCACGGTGGGAACACCACCGCTCCTGCCAGCGACTTCACAACTGTG
CGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
AAAAGGAGAAATTATGAT--------------------------------
-
>C3
ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGCCAACGACCTAAGCAAGGAGTCCACAG
AGTTCGAGGAGTCGCCGACCATCTACTACGGCGACCCCGTGGTGAACCTG
GGCCAGCCCTTCTCGATCACCTGCATAATCCCGATCACCGATCAGATTCA
TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
GGGATGATCATGCCTACGTTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
CACAAGATCGAGGCGCACCTGAGTGTGCGGCATGCGCTCAAGGTGCACGA
GGGTCGCTACCAGTGCAACCGGCGACGCGGCAGCTACATTCTGCACGTGC
GGGATCCCAAGGGAGTTGGAGCGGGAGCGGGCGAACCCACCGAGTCCGGC
TATCAAACCATTGACGAACTGACGCCCAACTCAGCGGATGATTTCTTCAC
ACGAGCGTGGCTGGAGCAGCAGCAGCAGCAGCAA---CAACAACAG---T
TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTACGGAAAT
GCCAGTCTGTCCGGGTCTCAGCCCTGGCATCCGTCGGCCGGCGGTGGCGG
CGGTATCCACCGCGTTTACTCGGCCACACCGCCCGATTTTCCACCTCCGC
GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
CTGTACAATCCCAATCCGACGCATCCCACTGCCAGCGCCACTGCCACGGA
GACCAGCGTGCTCCTGACGACGGCGCACCACCATGTCCACCATCAGCAGC
AGCTGCAGCAGCAGTCGCAGCACACGCTGAACGCCTTCCAGCTGCCACTG
CCGCCGCGACCCAATCCCGGCCAGAATGAGCGATACCAGACCTATGCACC
GCACTATGTGCCACCAGTGGTGGTATCG------GGAGCGGGCGCAGGCG
CGGAACCGGGAGCAGGAGCATCAGGAGAGCAGACCACCATTTCAGCAGCC
ACTAGCACAAGGGCCATGATGGGTGGCGGT---------GGTGGTGTTGC
TGGTTCGGGCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCG
GTCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
ACGCTCTTGCCCGTCAAGATGGATAAGTTGGTGCCAAACTATGATAATGC
CAAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCT
GCAACGTGAAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAAC
GGCACCGCTGTGACGGAGGTACCTTCTCTAAGAGGTCGCTTTAAGTTAAT
CGCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATG
GCAAATACAGTTGCGAGTTCGACGGAGAGTCCAAGGAAATCGAAGTGATT
GCCCGCGTTGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
AAAGATGTCGGTGACCTGCAGCGTTGTGGGTACCAATCCAGAGTTGACAT
GGACCTTTGCCAATGTAACGCTGACAAACGCCACAGATCGCTTCATCCTC
AAACCAGACGATAATGGTGTTCCTAACGCCATTCTGACACTGGAAAATGT
GACATTGGAAGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCA
ATGTCTACGGTGGGAACACCACCGCTCCTGCCAGCGACGTCACAACTGTG
CGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
AAAAGGAGAAATTATGAT--------------------------------
-
>C4
ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGCCAACGACCTGAGCAAGGCGTCCACAG
AGTTAGAGGAGCCGCAGACCATCTACTACGGTGACCCGGTGGTGAACCTG
GGCCAGCCGTTCTCGATCACCTGCATAATCCCGATCACCGAACAGATTCA
TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
GGGATGATCATGCCTACGCTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
CACAAGATCGAGGCACACCTGAGTGTGCGACATGCCCTTAAGGTGCACGA
GGGTCGCTACCAGTGCAACCGGTACAGCGACGGCTACATGCTGCACGTGC
GGGATCCCAAGGGAGTTGGAGCGGGAGCAGGCGAACCCACCGAGTCCGGC
TATCAAACCATCGACGAGCTAACGCCCAACTCTGCGGATGATTTCTTTAC
ACGAGCGTGGCTGGAGCAACAGCAGCAGCAGCAGCAGCAACAACAACAGT
TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTACGGAAAT
GCCAGTCTGTCTGCGTCTCAGCCGTGGCATCCGTCGGCCGGCGGAGGCGG
T---ATCCACCGCGTTTACTCGGCGACACCGCCCGATTTTCCACCCCCAC
GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
CTGTACAATCCCAATCCGACGCATCCCACTGCCAGCGCCACTGCCACGGA
GGCCAGCCTGCTCCTGACGACGGCGCACCACCATGTTCACCACCAGCAGC
AGTTGCAGCAGTCGTCGCAGCACACTCTGAACGCCTTCCAGCTGCCACTG
CCGCCGCGACCCAATCCCGGCCAGAATGAGCGATACCAGACCTATGCACC
GCACTATGTGCCCCCAGTGGTGGTATCTGGAGTGGGAGCGGGAGTGGAAG
CGGTACCGGGAGCAGGAGCATCAGGAGAGCACACCACCATTTCAGCAGCC
ACCAGCACAAGGGCCATGATGGGTGGCGGT---------GGTGGCGCTGC
TGCTGCGGGCATTTCTGCGGGCGCGAGTGGCCAAATGCTGGGTGCTGGCG
GCCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
ACGCTCTTGCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGT
CGAACATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCT
GCAACGTGAAAGACAGTACGCCGGGCGGCCTGCTCATATGGAGAAAGAAC
GGCACCGTTGTGACGGAAGTAGCTTCTCTAAGAGGTCGCTTTAAGTTAAT
CCCAGACGAGAACAAGTTCATCATCGATAAGACGGATACGACCGACGATG
GCGAATACAGTTGCGAGTACAGTGGAGAGACCAAGAAAATCGAAGTAATT
GCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
GAAGATGTCGGTGACCTGCAGCGTTGTGGGAACCAAACCACAGTTGACAT
GGACCTTTGGCAATGTAACGCTGACAAACGACACAGATCGCGTCATCGTC
AAACCAGAT---AATGGTGTTCCTAACGCCATTCTGACACTGGACAATGT
GACATTGGACGACAGAGGCGAATACAAATGCACTGGAAAAAATGCGGCCA
ATGAATACGCTAAGAACACCACTACTCTTGCCACCGACGCCACAACTCTT
CGTGTTAAGAGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
AAAAGGAGAAATTATGAT--------------------------------
-
>C5
ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGCCAACGACCTGAGCAAGGAGTCCACAG
AGTTCGAGGAGTCGCCGACCATCTACTACGGCGACCCCGTGGTGAACCTG
GGCCAGCCCTTCTCGATCACCTGCATAATCCCGATCACCGATCAGATTCA
TTGGCTCAAGAACGGGGAGCCGATCACGCGGCACAATCTGCGGCACGGGC
GGGATGATCATGCATACGCTCTGTCCGAGAGTGCAATCGAGGGTGAGAAG
CACAAGATCGAGGCCCACCTGAGTGTGCGGCATGCCCTCAAGGTGCACGA
GGGTCGGTACCAGTGCAACCGGCGGCGCGGCAGCTACATGCTGCACGTGC
GGGATCCCAAGGGAGTTGGAGCGGGAGCGGGCGAACCCACCGAATCCGGC
TATCAAACCATCGACGAGCTGACGCCCAACTCTGCGGATGACTTCTTTAC
ACGAGCGTGGCTGGAGCAACAGCAG------------CAGCAGCAACAGT
TGCCCCACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTTCGGAAAT
GCCAGTCTGTCTGGGTCTCAGCCCTGGCATCCGTCGGCCGGCGGAGGCGG
T---ATCCACCGCGTTTACTCGGCCACACCGCCTGACTTTCCACCCCCGC
GCCTTAATCTGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATA
CTGTACAATCCCAATCCGACGCACCCCACTGCCAGCGCCACTGCCACGGA
GGCCAGTCTGCTCCTGACGACGGCGCACCACCGTGCCCACCACCAGCAGC
AGTTGCAGCAGCAATCGCAGCACACGCTGAACGCCTTCCAGCTGCCACTG
CCGCCGCGACCCAATTCCGGCCAGAATGAGCGATACCAGACCTATGCACC
GCACTATGTGCCCCCAGTGGTGGTATCA------------GAAGCGGGAA
CGGGACCAGGAGCAGGAGCATCAGGAGAGCAGACCACCATTTCAGCAGCC
ACCAGCACAAGGGCCATGATGGGTGGT---------------------GC
TGGTGCGGGCATTTCTGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCG
GCCACATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
ACGCTCTTGCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGT
CGAGCATCAAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCT
GCAACGTGAAAGACGGTACGCCAGGCGGCGTGCTCATATGGAAAAAGAAC
GGCACCGCTGTGACGGAGGTACCTTCTCTAAGAGGTCGCTTTAAGTTAAT
CGCAGACGAGAACAAGTTTATCATCGATAAGACGGATACGAACGACGATG
GCAAATACAGTTGCGAGTTCGACGGAGTGTCCAAGGAAATCGAAGTGATT
GCCCGCGTTGTTGTAAGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGA
GAAGATGTCGGTGACCTGCAGCGTTGTGGGAACCAAACCTCAGTTGACAT
GGACCTTTGCCAATGTAACGCTGACAAACGGCACAGATCGCTTCATCCTC
AAACCAGACGATAATGGTGTTCCCAACGCCATTCTGACACTGGATAATGT
GACATTGGACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCG
ATGCCTTCGGTGGGAACAACACCACTCCTGCCAGCGACTTCACAACTGTG
CGTGTTAAGGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGC
TGAGGTGCTGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCA
ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
AAAAGGAGAAATTATGAT--------------------------------
-
>C6
ATGGAGGCAAAATTCTTGGCTAGCGCTCTTTCATTCCTCTCGATATTTTT
AGCGATTTATGCTCAATCACTTGCCAACGACCTGAGCGAGGAGTCCACAA
AGTTCCAGGTGCCGGCGACCATTTACTATGGCGACCCCAATGTAAACCTG
GGCCAGCCCTTCTCGATCACCTGCATTATCCCGATCAACGAGCAGATCCA
TTGGCTCAAGAACGGGGAGCCAATTACACGGCACAATCTGCGGCACGGGC
GGGATGATCATGCCTACATTTTGTCGGAGAGTGCTATTGAGGGTGAGAAG
CACAAGATCGAAGCACACCTGAGCGTGCGGCATGCCCTCAAGGTGCACGA
GGGTCGCTACCAGTGCAACCATCGCCACGGCGGCTACATGTTGCACGTTC
GAGATTCCAAGGGAGCTGGAGCTGGATCGAGTGAACCCACCGAGTCTGGC
TATCAAACCATTGACGAGTTGACGCCTAACTCGGCGGATGACTTCTTCAC
ACGAGCGTGGCTGGAGACGCAGCAACAACAA------CAACAGCAACAGT
TGCCCCATCAGTCGCACAAGCAGCACAAGTCGCATTTGGGTTATGGAAAC
ACCACTTTGTCCGGCTCTCAGCCGTGGCATCCATCGGCTGGTGGAGGGGG
G---ATCCACCGCGTTTACTCGGCCACACCGCCCGACTTCCCACCACCGC
GCCTCAATCTGCTGGAGCACACGGTGGCGCCACCGGAGCCACCAACTATA
CTATACAAT------CAGACGCATACCACTGCCAGCGCCGCTGCCACGGA
GGCCAGCCTGCTCCTGACGACGGCGCACCACCGTTCCCACCATCAGCAGC
AGTTGCAGCAACAGGCGCAGCACACGTTGAATGCCTTCCAGTTGCCACTG
CCGCCGCGACCCAATCTTGGCCAGAATGAGCGTTACCAGACCTATGCACC
GCACTATGTTCCGCCAGTGGTGGGATCA------------GGGACAGGAG
CAGGACCAGTTACAGTCGGTGAAGGAGAACAGACCACCATTTCAGCAGCC
ACTAGCACAAAGGCCATGATGGGTGGAGTTGGTTTTGGTGGTGGCACCGG
TGCTGCGGGAGGTCCTGCGGGTGCCAGTGCCCCAATGCTGGGTGCTGGAG
GCCATATGCTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAG
ACGCTCTTGCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATAT
CGAGCATAAAATGAAATTTTACGACATCAAATTTCCGCTGGTTCTCAGCT
GCAACGTGAAAGACGAAACGCCGGGC---GTACTCATATGGAAAAAGAAC
AACACCGCTGTGACGGAGGTGCCTTCCCTGAAAGGTCGCTTTAAGATAAT
CGCAGCTGAGAATAGGTTCATCATCGATAAAACGGACGTGCACGACGATG
GCTTATACAGTTGCGAGTACAACGGAGAGTCCCAGAATATCACAGTGATT
GCCCGCGTTATGGTAAGAGTGCCTTCAAATACCGCTGTTGTGGAGGGTGA
GAAGATGTCGGTGACCTGCACCGTCGTGGGAACTGACCCCCAGTTGTCAT
GGACCTTTGGCAATGTAACGCTGACAAACGCCACAGATCGCTTCGTCCTG
AAAGCGGATGATAACAATGTCCAGAACGCCATCCTGACACTGGACAATGT
GACATTGGACGACAGAGGCGAGTACAAATGCATTGGACGCAATGCGGCCA
ATGACTATGGTGATAACTCCACCGCTCCTGCCAGTGACTTCACAAACGTG
CGTGTTAAGGGCAAATTTGCCGCCGTGTGGCCTTTCCTGGGCATCTGTGC
TGAGGTGCTGATTCTGTGCATCATCATTCTCATCTATGAGAAGCGACGCA
ACAAGAGCGAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAG
AAAAGGAGAAATTATGAT--------------------------------
-
>C1
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQooooQQQQLPHQSHKLHKSHLGYGN
ASLSGSQPWHPSAGGGGoIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATETSVLLTTAHHHAHHQQQLQQQSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVSGAGAGAGADPGAGASGEQTTISAA
TSTRAMMGGGoooGGVAGAGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNAEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFIL
KPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYD
>C2
MEAKFWLALFHSSSIFLAIYAQSLANNLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQoQQQQLPHQSHKLHKSHLGYGN
ASLSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LFNPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVSooGAGAGAEPGAGASGEQTTISAA
TSTRAMMGGGoooGGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNAMHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTEVPSLIGRFKLIPDENKFIIDKTDTNDDGKYSCEFDGESKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFIL
KPDDNGVPNAILTLENVTLEDRGEYKCIGRNAANVHGGNTTAPASDFTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYD
>C3
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQoQQQoLPHQSHKLHKSHLGYGN
ASLSGSQPWHPSAGGGGGIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATETSVLLTTAHHHVHHQQQLQQQSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVSooGAGAGAEPGAGASGEQTTISAA
TSTRAMMGGGoooGGVAGSGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNAKHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTEVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGESKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTNPELTWTFANVTLTNATDRFIL
KPDDNGVPNAILTLENVTLEDRGEYKCIGRNAANVYGGNTTAPASDVTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYD
>C4
MEAKFLASALSFLSIFLAIYAQSLANDLSKASTELEEPQTIYYGDPVVNL
GQPFSITCIIPITEQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRYSDGYMLHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQQQQQQQQQLPHQSHKLHKSHLGYGN
ASLSASQPWHPSAGGGGoIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATEASLLLTTAHHHVHHQQQLQQSSQHTLNAFQLPL
PPRPNPGQNERYQTYAPHYVPPVVVSGVGAGVEAVPGAGASGEHTTISAA
TSTRAMMGGGoooGGAAAAGISAGASGQMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNVEHQMKFYDIRSPLVLSCNVKDSTPGGLLIWRKN
GTVVTEVASLRGRFKLIPDENKFIIDKTDTTDDGEYSCEYSGETKKIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLTWTFGNVTLTNDTDRVIV
KPDoNGVPNAILTLDNVTLDDRGEYKCTGKNAANEYAKNTTTLATDATTL
RVKSKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYD
>C5
MEAKFLASALSFLSIFLAIYAQSLANDLSKESTEFEESPTIYYGDPVVNL
GQPFSITCIIPITDQIHWLKNGEPITRHNLRHGRDDHAYALSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNRRRGSYMLHVRDPKGVGAGAGEPTESG
YQTIDELTPNSADDFFTRAWLEQQQooooQQQQLPHQSHKLHKSHLGFGN
ASLSGSQPWHPSAGGGGoIHRVYSATPPDFPPPRLNLLEQTVAPPEPPTI
LYNPNPTHPTASATATEASLLLTTAHHRAHHQQQLQQQSQHTLNAFQLPL
PPRPNSGQNERYQTYAPHYVPPVVVSooooEAGTGPGAGASGEQTTISAA
TSTRAMMGGoooooooAGAGISAGASGPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNVEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKN
GTAVTEVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVI
ARVVVRVPSNTAVVEGEKMSVTCSVVGTKPQLTWTFANVTLTNGTDRFIL
KPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAADAFGGNNTTPASDFTTV
RVKGKFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYD
>C6
MEAKFLASALSFLSIFLAIYAQSLANDLSEESTKFQVPATIYYGDPNVNL
GQPFSITCIIPINEQIHWLKNGEPITRHNLRHGRDDHAYILSESAIEGEK
HKIEAHLSVRHALKVHEGRYQCNHRHGGYMLHVRDSKGAGAGSSEPTESG
YQTIDELTPNSADDFFTRAWLETQQQQooQQQQLPHQSHKQHKSHLGYGN
TTLSGSQPWHPSAGGGGoIHRVYSATPPDFPPPRLNLLEHTVAPPEPPTI
LYNooQTHTTASAAATEASLLLTTAHHRSHHQQQLQQQAQHTLNAFQLPL
PPRPNLGQNERYQTYAPHYVPPVVGSooooGTGAGPVTVGEGEQTTISAA
TSTKAMMGGVGFGGGTGAAGGPAGASAPMLGAGGHMLMGGQGHQVHLQHQ
TLLPVKMDKLVPNYDNIEHKMKFYDIKFPLVLSCNVKDETPGoVLIWKKN
NTAVTEVPSLKGRFKIIAAENRFIIDKTDVHDDGLYSCEYNGESQNITVI
ARVMVRVPSNTAVVEGEKMSVTCTVVGTDPQLSWTFGNVTLTNATDRFVL
KADDNNVQNAILTLDNVTLDDRGEYKCIGRNAANDYGDNSTAPASDFTNV
RVKGKFAAVWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKK
KRRNYD
MrBayes v3.2.2 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/opt/ADOPS/27/Bsg-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 6 taxa and 2001 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C2
Taxon 3 -> C3
Taxon 4 -> C4
Taxon 5 -> C5
Taxon 6 -> C6
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1479466756
Setting output file names to "/opt/ADOPS/27/Bsg-PG/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called first_pos
Defining charset called second_pos
Defining charset called third_pos
Defining partition called by_codon
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1114505978
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 8788407496
Seed = 798686578
Swapseed = 1479466756
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
Gamma shape parameter is exponentially
distributed with parameter (2.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Gamma distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
Gamma shape parameter is exponentially
distributed with parameter (2.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Gamma distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
Gamma shape parameter is exponentially
distributed with parameter (2.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Gamma distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Active parameters:
Partition(s)
Parameters 1 2 3
------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(2.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(2.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:Exponential(10.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
1.06 % Dirichlet(Revmat{all})
1.06 % Slider(Revmat{all})
1.06 % Dirichlet(Pi{all})
1.06 % Slider(Pi{all})
2.13 % Multiplier(Alpha{1,2})
2.13 % Multiplier(Alpha{3})
2.13 % Slider(Pinvar{all})
10.64 % ExtSPR(Tau{all},V{all})
10.64 % ExtTBR(Tau{all},V{all})
10.64 % NNI(Tau{all},V{all})
10.64 % ParsSPR(Tau{all},V{all})
31.91 % Multiplier(V{all})
10.64 % Nodeslider(V{all})
4.26 % TLMultiplier(V{all})
Division 1 has 62 unique site patterns
Division 2 has 64 unique site patterns
Division 3 has 99 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -5776.454389 -- -24.965149
Chain 2 -- -5787.533479 -- -24.965149
Chain 3 -- -5860.514113 -- -24.965149
Chain 4 -- -5789.275377 -- -24.965149
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -5828.920812 -- -24.965149
Chain 2 -- -5778.806283 -- -24.965149
Chain 3 -- -5776.745000 -- -24.965149
Chain 4 -- -5793.290438 -- -24.965149
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-5776.454] (-5787.533) (-5860.514) (-5789.275) * [-5828.921] (-5778.806) (-5776.745) (-5793.290)
500 -- (-4789.068) [-4774.669] (-4783.272) (-4794.766) * [-4761.611] (-4785.444) (-4804.816) (-4790.655) -- 0:00:00
1000 -- (-4757.030) [-4741.296] (-4765.322) (-4789.491) * (-4738.058) (-4749.747) (-4776.177) [-4759.243] -- 0:00:00
1500 -- [-4745.099] (-4726.799) (-4742.147) (-4766.653) * [-4732.444] (-4732.951) (-4762.326) (-4760.519) -- 0:11:05
2000 -- (-4747.779) [-4729.760] (-4732.196) (-4739.420) * (-4731.884) [-4733.509] (-4739.491) (-4748.105) -- 0:08:19
2500 -- (-4741.028) [-4722.694] (-4737.340) (-4717.759) * [-4721.590] (-4727.754) (-4729.574) (-4732.507) -- 0:06:39
3000 -- (-4729.557) (-4725.162) [-4721.881] (-4718.148) * [-4720.745] (-4720.814) (-4728.138) (-4729.627) -- 0:05:32
3500 -- (-4724.437) [-4718.907] (-4726.548) (-4723.699) * (-4724.233) (-4720.857) (-4728.742) [-4729.726] -- 0:04:44
4000 -- (-4724.468) (-4724.180) (-4735.313) [-4718.720] * (-4721.701) (-4725.423) (-4718.406) [-4722.119] -- 0:04:09
4500 -- (-4724.256) (-4724.595) (-4721.293) [-4725.689] * (-4719.708) [-4726.861] (-4724.942) (-4723.443) -- 0:07:22
5000 -- (-4720.460) (-4727.960) (-4721.019) [-4723.595] * [-4719.599] (-4724.063) (-4725.440) (-4724.189) -- 0:06:38
Average standard deviation of split frequencies: 0.094281
5500 -- (-4718.426) (-4720.023) (-4719.935) [-4719.847] * (-4718.749) [-4725.609] (-4731.243) (-4726.297) -- 0:06:01
6000 -- (-4719.131) (-4729.947) [-4721.193] (-4720.063) * (-4722.613) [-4728.312] (-4721.341) (-4719.106) -- 0:05:31
6500 -- [-4725.209] (-4723.415) (-4720.499) (-4724.425) * (-4717.764) (-4724.866) (-4733.956) [-4720.849] -- 0:05:05
7000 -- [-4725.252] (-4722.642) (-4718.370) (-4730.151) * (-4723.276) (-4723.853) (-4719.392) [-4718.117] -- 0:07:05
7500 -- (-4730.414) (-4719.654) [-4723.524] (-4727.048) * [-4720.973] (-4723.425) (-4718.379) (-4722.489) -- 0:06:37
8000 -- [-4724.205] (-4717.745) (-4720.843) (-4724.688) * (-4722.489) (-4730.127) [-4721.571] (-4724.045) -- 0:06:12
8500 -- (-4724.608) [-4717.751] (-4720.730) (-4723.018) * (-4727.695) [-4723.609] (-4720.994) (-4722.222) -- 0:05:49
9000 -- (-4731.478) (-4718.780) (-4720.016) [-4724.122] * (-4721.520) (-4727.163) [-4724.507] (-4721.237) -- 0:05:30
9500 -- [-4725.214] (-4720.737) (-4722.970) (-4724.794) * [-4723.289] (-4720.878) (-4723.907) (-4718.986) -- 0:06:57
10000 -- (-4733.088) (-4727.215) (-4729.825) [-4722.014] * (-4724.571) (-4721.822) [-4721.690] (-4723.536) -- 0:06:36
Average standard deviation of split frequencies: 0.053033
10500 -- (-4726.044) (-4721.458) (-4722.047) [-4721.067] * [-4722.987] (-4723.528) (-4720.773) (-4720.390) -- 0:06:16
11000 -- (-4723.185) (-4721.127) [-4718.728] (-4719.107) * (-4720.050) (-4724.070) (-4720.292) [-4724.627] -- 0:05:59
11500 -- (-4727.361) (-4724.708) [-4719.335] (-4726.360) * [-4723.387] (-4731.763) (-4723.592) (-4722.164) -- 0:05:43
12000 -- (-4720.341) [-4721.832] (-4727.859) (-4724.538) * (-4722.398) (-4722.550) (-4717.154) [-4717.845] -- 0:06:51
12500 -- (-4727.558) [-4723.305] (-4721.388) (-4721.843) * [-4726.452] (-4725.410) (-4725.889) (-4723.733) -- 0:06:35
13000 -- (-4717.353) [-4723.777] (-4719.587) (-4727.701) * (-4719.319) (-4719.111) (-4720.213) [-4715.920] -- 0:06:19
13500 -- (-4724.702) (-4718.958) [-4719.498] (-4730.223) * [-4718.432] (-4727.886) (-4722.406) (-4723.048) -- 0:06:05
14000 -- [-4723.660] (-4721.879) (-4719.318) (-4729.128) * (-4722.903) (-4723.704) [-4725.722] (-4722.906) -- 0:05:52
14500 -- [-4721.509] (-4730.910) (-4726.058) (-4728.827) * (-4727.236) (-4726.599) (-4720.466) [-4721.606] -- 0:06:47
15000 -- [-4720.281] (-4721.052) (-4723.635) (-4726.928) * (-4722.125) [-4719.152] (-4729.231) (-4727.947) -- 0:06:34
Average standard deviation of split frequencies: 0.023570
15500 -- [-4719.569] (-4717.964) (-4724.516) (-4721.394) * (-4723.191) (-4720.870) (-4725.839) [-4727.820] -- 0:06:21
16000 -- (-4727.509) (-4721.896) (-4725.453) [-4727.603] * (-4718.455) (-4719.285) (-4723.595) [-4721.493] -- 0:06:09
16500 -- (-4726.204) (-4719.859) (-4720.911) [-4720.401] * [-4717.885] (-4722.319) (-4725.017) (-4719.265) -- 0:05:57
17000 -- (-4722.952) (-4725.999) (-4725.554) [-4729.177] * (-4723.097) [-4722.729] (-4716.899) (-4720.302) -- 0:06:44
17500 -- (-4716.423) [-4722.179] (-4721.339) (-4728.147) * (-4721.189) (-4720.479) (-4723.032) [-4721.378] -- 0:06:33
18000 -- [-4720.031] (-4722.547) (-4723.252) (-4732.358) * (-4721.658) (-4716.471) [-4721.371] (-4725.674) -- 0:06:21
18500 -- (-4724.083) (-4724.035) (-4718.226) [-4721.999] * (-4725.644) [-4719.647] (-4726.711) (-4729.013) -- 0:06:11
19000 -- (-4726.250) (-4718.556) [-4720.921] (-4719.030) * [-4722.926] (-4720.499) (-4721.591) (-4728.615) -- 0:06:01
19500 -- [-4723.867] (-4719.093) (-4718.603) (-4720.518) * (-4729.731) [-4717.839] (-4728.914) (-4725.601) -- 0:06:42
20000 -- [-4726.332] (-4721.085) (-4727.947) (-4720.888) * (-4723.464) (-4723.918) (-4725.178) [-4716.558] -- 0:06:32
Average standard deviation of split frequencies: 0.027372
20500 -- (-4720.069) (-4726.960) (-4721.922) [-4720.705] * (-4728.832) (-4722.860) [-4724.900] (-4725.940) -- 0:06:22
21000 -- (-4720.540) [-4728.652] (-4722.591) (-4724.590) * [-4729.096] (-4723.124) (-4723.467) (-4727.889) -- 0:06:12
21500 -- [-4718.077] (-4724.036) (-4724.800) (-4728.429) * (-4728.089) [-4718.671] (-4721.043) (-4725.853) -- 0:06:04
22000 -- (-4721.254) [-4726.031] (-4720.100) (-4727.869) * [-4719.365] (-4723.141) (-4727.440) (-4730.947) -- 0:06:40
22500 -- (-4720.020) (-4731.721) [-4727.101] (-4727.881) * (-4726.243) (-4724.618) [-4725.707] (-4721.408) -- 0:06:31
23000 -- (-4721.973) (-4722.173) (-4725.565) [-4732.842] * (-4723.930) [-4721.043] (-4721.720) (-4719.933) -- 0:06:22
23500 -- (-4727.819) [-4721.250] (-4727.561) (-4722.469) * (-4722.925) [-4727.255] (-4725.849) (-4725.796) -- 0:06:13
24000 -- (-4724.492) (-4724.560) (-4728.708) [-4729.124] * (-4725.521) (-4723.857) [-4722.059] (-4724.799) -- 0:06:06
24500 -- [-4721.951] (-4728.365) (-4724.061) (-4726.704) * [-4724.278] (-4723.277) (-4721.437) (-4717.272) -- 0:06:38
25000 -- [-4721.120] (-4730.053) (-4719.110) (-4728.495) * (-4723.179) (-4724.421) [-4720.894] (-4721.223) -- 0:06:30
Average standard deviation of split frequencies: 0.021757
25500 -- (-4718.476) (-4726.285) [-4718.562] (-4722.786) * [-4715.351] (-4727.672) (-4723.022) (-4717.957) -- 0:06:22
26000 -- (-4727.820) (-4730.287) [-4718.044] (-4722.646) * (-4721.616) (-4724.726) (-4719.605) [-4719.941] -- 0:06:14
26500 -- (-4724.101) (-4729.603) (-4718.326) [-4722.518] * [-4723.497] (-4727.091) (-4722.184) (-4729.520) -- 0:06:07
27000 -- (-4721.495) (-4723.307) [-4717.425] (-4728.316) * [-4722.799] (-4721.212) (-4725.807) (-4721.903) -- 0:06:00
27500 -- (-4721.931) (-4723.209) [-4722.534] (-4721.918) * [-4718.647] (-4720.387) (-4722.884) (-4728.220) -- 0:06:29
28000 -- (-4724.645) (-4723.075) (-4720.189) [-4718.485] * (-4721.883) (-4721.182) (-4732.340) [-4720.940] -- 0:06:21
28500 -- (-4722.231) (-4720.095) (-4725.797) [-4722.851] * (-4720.929) [-4720.511] (-4721.277) (-4728.398) -- 0:06:14
29000 -- [-4721.476] (-4729.173) (-4724.221) (-4724.765) * (-4717.770) [-4720.308] (-4726.974) (-4724.064) -- 0:06:08
29500 -- (-4728.005) (-4725.747) (-4720.820) [-4724.673] * [-4719.178] (-4721.100) (-4724.449) (-4727.550) -- 0:06:01
30000 -- (-4728.126) (-4723.299) (-4725.698) [-4719.547] * (-4720.507) (-4726.206) (-4723.351) [-4726.545] -- 0:06:28
Average standard deviation of split frequencies: 0.018446
30500 -- (-4723.119) (-4721.065) (-4718.152) [-4724.053] * (-4726.507) (-4729.107) [-4723.696] (-4723.558) -- 0:06:21
31000 -- [-4720.370] (-4723.637) (-4718.754) (-4721.425) * (-4720.091) (-4732.088) (-4718.529) [-4723.079] -- 0:06:15
31500 -- (-4721.619) (-4727.844) [-4717.547] (-4722.622) * [-4719.131] (-4727.765) (-4720.717) (-4719.067) -- 0:06:08
32000 -- (-4721.234) (-4727.952) [-4718.745] (-4718.073) * (-4721.633) [-4718.824] (-4725.311) (-4728.615) -- 0:06:03
32500 -- [-4725.043] (-4721.228) (-4720.225) (-4723.062) * (-4723.726) [-4717.317] (-4718.010) (-4725.414) -- 0:06:27
33000 -- [-4721.988] (-4721.140) (-4720.469) (-4723.386) * (-4724.648) [-4725.066] (-4723.957) (-4727.431) -- 0:06:20
33500 -- (-4720.435) [-4718.171] (-4721.504) (-4728.257) * [-4723.547] (-4725.924) (-4717.867) (-4724.576) -- 0:06:15
34000 -- [-4720.858] (-4724.847) (-4722.135) (-4721.283) * [-4720.777] (-4721.493) (-4729.543) (-4718.376) -- 0:06:09
34500 -- [-4719.155] (-4724.113) (-4724.587) (-4724.549) * (-4718.193) [-4722.493] (-4727.610) (-4729.220) -- 0:06:03
35000 -- (-4722.462) (-4725.404) [-4723.181] (-4720.405) * (-4719.434) (-4717.667) [-4722.751] (-4719.536) -- 0:06:26
Average standard deviation of split frequencies: 0.031427
35500 -- [-4720.466] (-4726.753) (-4722.565) (-4722.386) * (-4723.793) (-4719.637) (-4725.019) [-4719.995] -- 0:06:20
36000 -- (-4721.932) [-4723.451] (-4727.992) (-4724.566) * (-4726.219) (-4722.433) (-4728.241) [-4719.074] -- 0:06:14
36500 -- (-4718.442) (-4721.430) [-4720.690] (-4718.486) * (-4723.346) [-4717.307] (-4722.390) (-4724.135) -- 0:06:09
37000 -- (-4724.788) [-4721.373] (-4721.370) (-4717.174) * (-4724.736) [-4720.593] (-4727.434) (-4718.700) -- 0:06:04
37500 -- (-4725.378) (-4721.633) [-4718.121] (-4718.757) * (-4727.563) [-4722.477] (-4717.862) (-4717.494) -- 0:06:25
38000 -- (-4726.180) [-4722.537] (-4718.860) (-4722.253) * [-4718.663] (-4727.934) (-4718.021) (-4722.212) -- 0:06:19
38500 -- (-4720.074) (-4722.750) [-4722.939] (-4718.417) * (-4721.472) (-4726.732) [-4718.970] (-4729.168) -- 0:06:14
39000 -- (-4724.607) (-4726.775) (-4722.318) [-4722.649] * [-4725.717] (-4718.099) (-4724.297) (-4724.674) -- 0:06:09
39500 -- [-4719.261] (-4721.519) (-4721.764) (-4721.824) * (-4730.106) [-4726.757] (-4719.394) (-4729.220) -- 0:06:04
40000 -- (-4720.459) (-4723.704) [-4723.648] (-4716.071) * (-4723.200) [-4720.488] (-4729.966) (-4726.240) -- 0:06:24
Average standard deviation of split frequencies: 0.009274
40500 -- [-4721.268] (-4727.125) (-4723.746) (-4720.091) * (-4722.287) [-4719.663] (-4722.640) (-4720.655) -- 0:06:19
41000 -- (-4718.610) [-4722.745] (-4731.822) (-4723.551) * (-4720.953) [-4721.623] (-4724.133) (-4721.196) -- 0:06:14
41500 -- (-4723.406) [-4722.981] (-4721.251) (-4723.488) * [-4719.120] (-4730.456) (-4719.214) (-4726.016) -- 0:06:09
42000 -- (-4722.144) (-4718.169) [-4722.561] (-4723.325) * (-4726.247) (-4723.686) [-4726.103] (-4733.543) -- 0:06:04
42500 -- (-4723.009) (-4724.568) (-4721.568) [-4718.176] * [-4726.444] (-4719.663) (-4722.394) (-4726.302) -- 0:06:23
43000 -- (-4720.166) (-4722.332) [-4718.973] (-4725.305) * [-4724.753] (-4718.384) (-4720.410) (-4727.878) -- 0:06:18
43500 -- [-4718.118] (-4732.921) (-4719.388) (-4725.891) * [-4721.161] (-4717.785) (-4727.510) (-4721.804) -- 0:06:13
44000 -- (-4727.317) (-4732.253) (-4725.138) [-4722.274] * (-4725.614) [-4718.938] (-4724.955) (-4723.108) -- 0:06:09
44500 -- (-4716.999) (-4717.638) [-4723.748] (-4720.323) * (-4725.580) (-4721.240) (-4726.258) [-4722.966] -- 0:06:05
45000 -- [-4718.461] (-4719.342) (-4725.143) (-4727.123) * (-4722.928) (-4718.161) [-4724.499] (-4719.430) -- 0:06:22
Average standard deviation of split frequencies: 0.008198
45500 -- (-4721.867) (-4717.331) [-4725.950] (-4724.345) * (-4724.245) [-4717.820] (-4723.712) (-4728.855) -- 0:06:17
46000 -- [-4717.469] (-4729.628) (-4730.591) (-4721.009) * (-4724.718) [-4725.665] (-4729.997) (-4730.525) -- 0:06:13
46500 -- [-4722.560] (-4717.834) (-4735.718) (-4730.684) * [-4718.464] (-4727.354) (-4728.936) (-4725.023) -- 0:06:09
47000 -- [-4729.715] (-4726.662) (-4725.470) (-4726.507) * (-4723.634) (-4723.481) [-4730.879] (-4722.211) -- 0:06:04
47500 -- (-4731.019) (-4718.360) [-4716.964] (-4725.429) * [-4722.549] (-4727.196) (-4725.710) (-4732.416) -- 0:06:21
48000 -- (-4730.337) (-4720.975) [-4717.442] (-4724.221) * [-4721.865] (-4730.722) (-4722.497) (-4718.500) -- 0:06:16
48500 -- (-4725.262) (-4727.142) [-4719.593] (-4720.782) * (-4723.254) [-4725.580] (-4727.671) (-4721.137) -- 0:06:12
49000 -- (-4728.358) (-4729.223) [-4717.402] (-4724.049) * (-4728.488) [-4723.400] (-4730.112) (-4724.475) -- 0:06:08
49500 -- (-4716.452) [-4725.441] (-4726.642) (-4729.793) * [-4723.178] (-4725.876) (-4723.077) (-4719.603) -- 0:06:04
50000 -- (-4720.275) (-4724.644) [-4725.382] (-4718.762) * (-4725.426) (-4727.173) [-4719.565] (-4719.342) -- 0:06:01
Average standard deviation of split frequencies: 0.011165
50500 -- (-4720.148) [-4723.986] (-4717.530) (-4722.830) * (-4725.815) [-4725.139] (-4716.567) (-4718.378) -- 0:06:16
51000 -- (-4720.039) (-4725.580) (-4721.844) [-4718.551] * (-4724.933) [-4723.052] (-4726.073) (-4721.577) -- 0:06:12
51500 -- [-4728.410] (-4721.788) (-4723.302) (-4721.164) * (-4723.848) [-4718.172] (-4730.702) (-4720.572) -- 0:06:08
52000 -- (-4723.864) [-4722.178] (-4728.628) (-4724.323) * (-4722.435) (-4721.905) (-4720.355) [-4722.605] -- 0:06:04
52500 -- (-4723.849) (-4724.410) [-4725.512] (-4724.541) * (-4719.907) (-4722.972) (-4730.850) [-4717.131] -- 0:06:00
53000 -- [-4724.935] (-4721.928) (-4727.444) (-4725.000) * (-4725.659) (-4724.917) (-4720.254) [-4718.772] -- 0:06:15
53500 -- (-4724.865) (-4719.723) (-4724.503) [-4718.166] * [-4722.256] (-4729.258) (-4722.728) (-4725.783) -- 0:06:11
54000 -- [-4722.356] (-4718.739) (-4725.118) (-4722.543) * (-4728.759) (-4720.282) (-4719.879) [-4721.961] -- 0:06:07
54500 -- (-4729.498) (-4722.193) (-4723.673) [-4729.480] * (-4722.006) [-4718.960] (-4718.279) (-4730.740) -- 0:06:04
55000 -- (-4727.234) (-4722.003) [-4719.006] (-4718.831) * (-4720.223) [-4720.114] (-4720.409) (-4725.828) -- 0:06:00
Average standard deviation of split frequencies: 0.010102
55500 -- (-4720.446) (-4725.419) (-4724.931) [-4723.911] * [-4723.376] (-4724.900) (-4724.791) (-4723.681) -- 0:06:14
56000 -- (-4728.678) [-4723.665] (-4719.718) (-4722.233) * (-4729.137) [-4722.218] (-4721.073) (-4721.505) -- 0:06:10
56500 -- (-4722.251) (-4726.087) (-4724.423) [-4718.675] * (-4725.890) (-4723.716) [-4718.196] (-4721.513) -- 0:06:07
57000 -- [-4720.817] (-4719.864) (-4724.115) (-4721.434) * (-4722.791) (-4724.274) [-4720.289] (-4722.702) -- 0:06:03
57500 -- (-4721.642) (-4725.183) (-4722.149) [-4719.260] * (-4726.173) [-4719.837] (-4723.620) (-4718.887) -- 0:06:00
58000 -- (-4728.060) (-4724.243) (-4727.399) [-4720.668] * (-4725.047) [-4719.106] (-4718.701) (-4720.197) -- 0:06:13
58500 -- (-4728.311) [-4731.781] (-4723.137) (-4723.809) * (-4725.070) (-4720.165) [-4717.546] (-4724.062) -- 0:06:10
59000 -- [-4719.672] (-4728.677) (-4723.844) (-4728.650) * (-4724.251) (-4722.989) [-4720.028] (-4717.757) -- 0:06:06
59500 -- [-4721.100] (-4720.167) (-4726.459) (-4718.080) * (-4724.616) (-4722.538) [-4723.283] (-4721.199) -- 0:06:03
60000 -- (-4720.026) (-4723.241) (-4718.965) [-4724.724] * [-4721.318] (-4720.616) (-4723.727) (-4733.080) -- 0:06:00
Average standard deviation of split frequencies: 0.012433
60500 -- (-4722.937) [-4720.101] (-4733.263) (-4718.076) * [-4725.114] (-4718.974) (-4720.506) (-4727.379) -- 0:06:12
61000 -- [-4722.369] (-4720.133) (-4727.276) (-4721.629) * (-4720.934) [-4717.914] (-4725.130) (-4724.531) -- 0:06:09
61500 -- (-4720.359) [-4717.750] (-4733.997) (-4730.572) * (-4722.232) [-4720.757] (-4726.415) (-4728.931) -- 0:06:06
62000 -- (-4721.607) (-4722.464) (-4727.135) [-4722.976] * (-4728.643) (-4728.708) (-4725.772) [-4723.362] -- 0:06:03
62500 -- (-4718.141) (-4723.033) (-4725.952) [-4718.879] * [-4722.514] (-4731.779) (-4723.568) (-4716.212) -- 0:06:00
63000 -- (-4725.365) [-4721.350] (-4728.080) (-4716.915) * [-4721.111] (-4722.897) (-4718.951) (-4721.109) -- 0:06:11
63500 -- (-4725.323) [-4717.920] (-4730.858) (-4723.000) * (-4723.911) (-4724.473) (-4720.785) [-4721.211] -- 0:06:08
64000 -- (-4721.914) (-4721.405) [-4722.694] (-4721.978) * [-4726.267] (-4719.376) (-4725.281) (-4725.936) -- 0:06:05
64500 -- (-4732.000) (-4723.234) [-4718.744] (-4722.312) * (-4724.900) [-4722.914] (-4723.642) (-4723.325) -- 0:06:02
65000 -- (-4722.515) [-4720.808] (-4720.436) (-4725.643) * (-4722.675) (-4721.643) (-4731.101) [-4724.237] -- 0:05:59
Average standard deviation of split frequencies: 0.014285
65500 -- (-4725.973) [-4722.431] (-4724.019) (-4726.486) * (-4723.173) [-4721.723] (-4724.434) (-4721.120) -- 0:06:10
66000 -- (-4734.084) (-4721.704) [-4720.824] (-4730.083) * (-4721.403) (-4722.779) [-4722.072] (-4728.634) -- 0:06:07
66500 -- [-4725.806] (-4723.231) (-4720.648) (-4723.992) * (-4719.416) [-4728.731] (-4726.015) (-4726.427) -- 0:06:04
67000 -- (-4725.654) [-4718.701] (-4723.487) (-4725.319) * (-4723.704) (-4731.131) [-4725.320] (-4724.555) -- 0:06:02
67500 -- (-4725.194) (-4718.772) (-4722.633) [-4720.173] * (-4729.121) (-4731.042) [-4727.069] (-4722.634) -- 0:05:59
68000 -- [-4723.898] (-4723.868) (-4722.156) (-4720.016) * (-4724.984) (-4725.785) [-4724.102] (-4724.578) -- 0:06:10
68500 -- (-4720.008) (-4722.937) (-4725.846) [-4718.578] * [-4726.713] (-4725.554) (-4719.291) (-4725.453) -- 0:06:07
69000 -- (-4724.996) [-4722.224] (-4717.111) (-4718.592) * (-4722.526) [-4718.843] (-4719.626) (-4727.266) -- 0:06:04
69500 -- (-4724.550) (-4732.009) (-4717.306) [-4720.580] * (-4728.046) [-4719.827] (-4722.191) (-4732.594) -- 0:06:01
70000 -- (-4729.238) [-4728.249] (-4718.215) (-4721.877) * (-4726.321) (-4723.973) [-4725.369] (-4724.923) -- 0:05:58
Average standard deviation of split frequencies: 0.013342
70500 -- (-4725.532) (-4730.283) (-4721.800) [-4718.175] * (-4724.229) (-4725.572) (-4718.674) [-4718.585] -- 0:06:09
71000 -- (-4722.571) [-4721.571] (-4722.586) (-4718.316) * (-4719.758) (-4731.370) (-4722.588) [-4717.649] -- 0:06:06
71500 -- (-4726.283) (-4724.890) (-4722.304) [-4717.341] * (-4730.522) [-4725.274] (-4718.187) (-4722.579) -- 0:06:03
72000 -- (-4726.375) [-4722.142] (-4719.297) (-4722.524) * (-4719.045) (-4718.599) (-4725.125) [-4732.165] -- 0:06:00
72500 -- (-4729.348) [-4722.918] (-4721.526) (-4725.775) * (-4720.548) [-4727.607] (-4724.673) (-4725.964) -- 0:05:58
73000 -- (-4721.743) [-4720.834] (-4722.997) (-4728.609) * (-4723.863) (-4726.649) [-4720.165] (-4724.596) -- 0:06:08
73500 -- (-4722.980) (-4721.039) [-4719.875] (-4724.739) * (-4723.344) (-4720.697) (-4720.858) [-4725.504] -- 0:06:05
74000 -- (-4727.638) (-4724.425) [-4719.359] (-4725.939) * [-4726.079] (-4727.216) (-4720.833) (-4718.740) -- 0:06:02
74500 -- (-4722.154) (-4725.409) [-4720.017] (-4729.706) * (-4725.620) (-4727.060) [-4721.086] (-4724.261) -- 0:06:00
75000 -- (-4721.107) (-4726.123) [-4723.225] (-4721.604) * (-4724.361) (-4723.289) [-4721.144] (-4723.171) -- 0:05:57
Average standard deviation of split frequencies: 0.012405
75500 -- (-4722.945) [-4725.158] (-4723.824) (-4722.288) * [-4723.035] (-4729.668) (-4722.293) (-4729.289) -- 0:06:07
76000 -- (-4728.180) (-4722.872) (-4722.466) [-4721.315] * (-4722.801) (-4726.781) (-4726.177) [-4725.161] -- 0:06:04
76500 -- (-4722.600) (-4719.676) (-4724.459) [-4725.257] * (-4718.776) (-4725.180) [-4720.735] (-4720.735) -- 0:06:02
77000 -- (-4727.028) (-4726.032) [-4719.069] (-4721.797) * [-4723.699] (-4724.851) (-4717.042) (-4723.874) -- 0:05:59
77500 -- [-4725.879] (-4727.337) (-4719.443) (-4718.685) * (-4724.478) (-4721.662) [-4717.267] (-4721.209) -- 0:05:57
78000 -- (-4724.586) (-4723.587) [-4723.875] (-4721.714) * (-4724.014) [-4721.338] (-4725.486) (-4722.291) -- 0:05:54
78500 -- (-4722.584) (-4721.383) [-4724.382] (-4719.638) * (-4718.834) (-4722.352) (-4721.317) [-4718.170] -- 0:06:03
79000 -- (-4723.006) [-4717.992] (-4725.222) (-4724.477) * [-4721.834] (-4721.073) (-4727.394) (-4720.145) -- 0:06:01
79500 -- (-4725.027) [-4725.829] (-4725.598) (-4723.704) * (-4724.426) (-4721.496) [-4719.031] (-4715.547) -- 0:05:58
80000 -- (-4723.622) (-4722.723) (-4722.581) [-4720.723] * [-4722.578] (-4722.615) (-4720.614) (-4718.568) -- 0:05:56
Average standard deviation of split frequencies: 0.016363
80500 -- (-4721.157) (-4725.045) (-4718.632) [-4720.169] * (-4719.063) [-4718.107] (-4729.916) (-4726.518) -- 0:05:54
81000 -- (-4722.034) (-4728.177) [-4722.678] (-4723.264) * [-4721.928] (-4722.072) (-4723.816) (-4721.004) -- 0:06:03
81500 -- [-4721.485] (-4729.944) (-4719.447) (-4720.976) * [-4719.344] (-4724.190) (-4724.106) (-4722.232) -- 0:06:00
82000 -- (-4723.912) (-4724.144) [-4730.777] (-4720.566) * [-4719.473] (-4722.012) (-4723.110) (-4721.306) -- 0:05:58
82500 -- (-4725.154) [-4725.503] (-4724.618) (-4719.698) * (-4724.106) (-4720.613) [-4726.997] (-4732.405) -- 0:05:55
83000 -- [-4719.292] (-4727.256) (-4723.676) (-4719.052) * (-4720.736) (-4727.293) [-4718.378] (-4718.787) -- 0:06:04
83500 -- (-4718.185) (-4722.669) [-4724.083] (-4720.952) * [-4725.113] (-4721.768) (-4727.291) (-4719.353) -- 0:06:02
84000 -- (-4724.382) [-4727.489] (-4728.161) (-4725.361) * (-4720.290) [-4718.482] (-4722.551) (-4719.422) -- 0:05:59
84500 -- [-4721.122] (-4731.197) (-4723.507) (-4732.749) * (-4730.626) [-4719.503] (-4725.864) (-4723.993) -- 0:05:57
85000 -- (-4718.768) [-4717.303] (-4725.992) (-4723.463) * (-4724.670) (-4722.470) [-4720.275] (-4727.801) -- 0:05:55
Average standard deviation of split frequencies: 0.010963
85500 -- [-4725.715] (-4721.846) (-4725.270) (-4721.090) * (-4727.173) [-4720.837] (-4717.447) (-4725.818) -- 0:05:52
86000 -- (-4727.406) (-4722.279) (-4727.375) [-4717.176] * (-4725.263) (-4725.193) (-4718.889) [-4720.186] -- 0:06:01
86500 -- (-4729.117) (-4732.067) [-4724.588] (-4719.972) * (-4730.391) (-4724.621) (-4721.135) [-4717.793] -- 0:05:59
87000 -- (-4727.306) (-4719.429) (-4723.190) [-4724.235] * (-4727.698) [-4723.136] (-4723.190) (-4718.240) -- 0:05:56
87500 -- [-4725.573] (-4720.789) (-4720.267) (-4718.264) * (-4723.095) (-4727.531) (-4721.899) [-4721.712] -- 0:05:54
88000 -- (-4725.135) (-4726.550) [-4727.362] (-4726.918) * (-4721.353) (-4719.231) [-4721.791] (-4723.853) -- 0:05:52
88500 -- (-4722.457) (-4728.011) [-4720.230] (-4729.613) * (-4722.339) (-4722.978) [-4725.029] (-4722.682) -- 0:06:00
89000 -- [-4724.277] (-4726.220) (-4727.220) (-4727.442) * (-4720.418) (-4719.970) [-4728.245] (-4732.357) -- 0:05:58
89500 -- [-4726.591] (-4729.394) (-4725.487) (-4722.327) * [-4723.289] (-4720.712) (-4728.277) (-4732.137) -- 0:05:56
90000 -- (-4728.050) (-4725.493) [-4721.508] (-4726.360) * (-4724.675) [-4718.215] (-4727.736) (-4721.843) -- 0:05:53
Average standard deviation of split frequencies: 0.014558
90500 -- (-4718.175) [-4719.438] (-4726.479) (-4721.420) * [-4718.320] (-4726.540) (-4734.349) (-4730.165) -- 0:05:51
91000 -- (-4725.945) (-4724.031) [-4725.116] (-4719.413) * (-4720.539) (-4722.257) [-4722.720] (-4721.017) -- 0:05:59
91500 -- (-4729.830) (-4732.395) [-4720.004] (-4730.374) * [-4720.631] (-4722.440) (-4724.921) (-4725.833) -- 0:05:57
92000 -- (-4728.144) (-4730.837) [-4719.338] (-4719.832) * (-4729.832) [-4719.475] (-4722.242) (-4721.710) -- 0:05:55
92500 -- (-4721.829) (-4737.519) [-4733.050] (-4722.119) * (-4720.790) [-4719.427] (-4724.468) (-4715.597) -- 0:05:53
93000 -- (-4724.174) (-4727.226) (-4723.958) [-4726.836] * (-4717.745) (-4719.493) [-4727.440] (-4722.002) -- 0:05:51
93500 -- [-4723.984] (-4722.133) (-4723.873) (-4731.438) * (-4721.024) (-4727.195) [-4719.964] (-4718.965) -- 0:05:58
94000 -- (-4716.462) (-4717.846) [-4724.779] (-4731.313) * (-4723.330) [-4721.056] (-4726.477) (-4734.299) -- 0:05:56
94500 -- [-4718.745] (-4716.739) (-4719.238) (-4726.820) * (-4728.012) (-4728.325) (-4724.079) [-4717.980] -- 0:05:54
95000 -- (-4722.113) (-4725.617) [-4719.944] (-4725.343) * (-4733.852) (-4728.752) (-4723.727) [-4722.656] -- 0:05:52
Average standard deviation of split frequencies: 0.013749
95500 -- (-4723.691) (-4717.984) (-4720.811) [-4722.758] * (-4726.519) (-4720.101) [-4719.564] (-4723.164) -- 0:05:50
96000 -- [-4724.920] (-4720.855) (-4723.674) (-4727.312) * (-4723.230) (-4724.952) (-4721.889) [-4719.307] -- 0:05:57
96500 -- [-4719.894] (-4725.090) (-4719.270) (-4727.012) * (-4723.120) (-4718.651) (-4727.093) [-4719.937] -- 0:05:55
97000 -- (-4725.424) (-4720.006) (-4722.635) [-4720.468] * (-4722.879) [-4721.607] (-4726.320) (-4720.160) -- 0:05:53
97500 -- (-4724.199) [-4721.293] (-4717.691) (-4722.325) * (-4730.676) (-4720.437) (-4726.761) [-4719.990] -- 0:05:51
98000 -- (-4729.784) (-4719.856) (-4722.338) [-4728.182] * (-4721.075) (-4730.839) [-4725.250] (-4720.730) -- 0:05:49
98500 -- (-4735.297) (-4723.619) (-4717.920) [-4721.532] * [-4724.444] (-4727.124) (-4723.652) (-4719.660) -- 0:05:56
99000 -- (-4722.710) (-4722.682) [-4720.734] (-4719.740) * (-4725.340) (-4721.764) [-4718.953] (-4723.009) -- 0:05:54
99500 -- (-4722.847) (-4723.855) (-4732.200) [-4720.055] * (-4721.333) (-4723.333) [-4720.932] (-4722.894) -- 0:05:52
100000 -- (-4718.313) (-4724.375) (-4731.838) [-4721.168] * (-4723.664) (-4726.383) [-4719.846] (-4723.099) -- 0:05:51
Average standard deviation of split frequencies: 0.018731
100500 -- (-4721.031) [-4723.116] (-4728.715) (-4723.492) * (-4727.401) (-4725.509) (-4719.797) [-4722.952] -- 0:05:49
101000 -- (-4728.187) (-4721.870) [-4721.559] (-4730.760) * [-4720.902] (-4720.573) (-4725.868) (-4723.792) -- 0:05:56
101500 -- [-4718.587] (-4728.369) (-4731.209) (-4725.957) * (-4728.182) (-4724.011) (-4722.517) [-4730.504] -- 0:05:54
102000 -- (-4721.333) [-4720.652] (-4727.141) (-4722.155) * (-4729.072) (-4721.521) [-4724.229] (-4725.454) -- 0:05:52
102500 -- (-4725.742) (-4722.397) [-4720.378] (-4723.083) * (-4721.741) (-4724.427) (-4725.634) [-4722.257] -- 0:05:50
103000 -- (-4718.136) [-4718.871] (-4725.367) (-4727.757) * (-4719.814) [-4723.622] (-4725.575) (-4720.933) -- 0:05:48
103500 -- (-4724.749) (-4724.404) [-4721.324] (-4722.488) * (-4723.930) (-4724.117) (-4722.787) [-4719.730] -- 0:05:55
104000 -- (-4720.378) (-4724.987) (-4728.001) [-4723.352] * (-4731.388) (-4721.816) (-4727.002) [-4723.872] -- 0:05:53
104500 -- [-4723.336] (-4723.195) (-4727.975) (-4728.142) * (-4727.015) [-4723.957] (-4729.930) (-4724.931) -- 0:05:51
105000 -- (-4730.537) (-4724.752) [-4722.509] (-4729.271) * [-4720.389] (-4726.584) (-4732.213) (-4724.553) -- 0:05:49
Average standard deviation of split frequencies: 0.021347
105500 -- (-4722.018) [-4719.872] (-4718.588) (-4729.280) * (-4723.763) [-4717.898] (-4726.944) (-4728.065) -- 0:05:47
106000 -- (-4720.065) (-4727.232) [-4717.214] (-4728.813) * (-4730.889) (-4720.860) [-4725.383] (-4724.332) -- 0:05:45
106500 -- (-4719.223) (-4726.831) [-4722.227] (-4730.088) * (-4728.423) (-4726.571) [-4727.478] (-4725.382) -- 0:05:52
107000 -- [-4727.723] (-4721.893) (-4728.046) (-4722.454) * (-4725.787) [-4730.376] (-4720.289) (-4722.054) -- 0:05:50
107500 -- [-4727.740] (-4730.363) (-4719.721) (-4733.031) * (-4719.560) (-4727.747) [-4723.326] (-4725.097) -- 0:05:48
108000 -- [-4728.245] (-4725.016) (-4729.241) (-4726.810) * [-4718.360] (-4725.916) (-4726.959) (-4724.244) -- 0:05:46
108500 -- (-4723.274) (-4728.306) (-4731.576) [-4723.704] * (-4723.008) [-4721.860] (-4733.374) (-4720.520) -- 0:05:45
109000 -- [-4722.009] (-4727.098) (-4719.185) (-4726.007) * [-4725.299] (-4718.790) (-4728.073) (-4722.638) -- 0:05:51
109500 -- [-4721.583] (-4727.890) (-4726.131) (-4724.036) * (-4732.538) (-4717.484) (-4721.385) [-4726.883] -- 0:05:49
110000 -- [-4719.898] (-4730.403) (-4721.599) (-4717.801) * [-4725.997] (-4717.400) (-4724.042) (-4724.061) -- 0:05:47
Average standard deviation of split frequencies: 0.027262
110500 -- (-4723.430) [-4727.779] (-4720.960) (-4729.400) * (-4723.525) (-4725.496) [-4723.190] (-4725.511) -- 0:05:46
111000 -- (-4726.559) (-4728.009) [-4717.725] (-4723.079) * (-4719.656) (-4723.215) (-4722.161) [-4725.211] -- 0:05:44
111500 -- (-4726.416) (-4730.017) (-4722.028) [-4716.803] * [-4718.778] (-4725.142) (-4729.527) (-4722.231) -- 0:05:50
112000 -- [-4725.101] (-4727.032) (-4721.101) (-4720.746) * (-4721.073) (-4730.301) (-4727.887) [-4723.331] -- 0:05:48
112500 -- [-4719.119] (-4733.442) (-4720.837) (-4719.870) * (-4718.840) [-4723.122] (-4716.130) (-4722.432) -- 0:05:47
113000 -- (-4723.799) (-4726.411) (-4723.656) [-4720.952] * [-4722.151] (-4717.998) (-4718.365) (-4720.301) -- 0:05:45
113500 -- (-4717.595) (-4722.716) (-4723.685) [-4723.400] * (-4723.185) (-4720.228) (-4730.271) [-4720.176] -- 0:05:43
114000 -- [-4717.585] (-4725.455) (-4720.876) (-4734.978) * (-4715.391) (-4720.615) (-4729.205) [-4721.144] -- 0:05:49
114500 -- [-4719.040] (-4721.585) (-4731.405) (-4723.274) * [-4727.442] (-4722.231) (-4724.149) (-4718.709) -- 0:05: 