--- EXPERIMENT NOTES
--- EXPERIMENT PROPERTIES
#Fri Nov 25 17:07:19 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/1/2mit-PD/input.fasta
input.names=
mrbayes.params=
codeml.params=
--- PSRF SUMMARY
Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/1/2mit-PD/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/1/2mit-PD/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)
(Values are saved to the file /opt/ADOPS/1/2mit-PD/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)
Run Arithmetic mean Harmonic mean
--------------------------------------
1 -8663.19 -8674.61
2 -8663.09 -8673.22
--------------------------------------
TOTAL -8663.14 -8674.13
--------------------------------------
Model parameter summaries over the runs sampled in files
"/opt/ADOPS/1/2mit-PD/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/1/2mit-PD/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/1/2mit-PD/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".
95% HPD Interval
--------------------
Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+
------------------------------------------------------------------------------------------------------
TL{all} 0.444184 0.000926 0.387169 0.503074 0.442610 1103.79 1253.32 1.000
r(A<->C){all} 0.071891 0.000114 0.051489 0.092122 0.071508 1195.75 1233.35 1.000
r(A<->G){all} 0.232592 0.000411 0.196026 0.275672 0.232162 774.38 807.73 1.000
r(A<->T){all} 0.100269 0.000218 0.072600 0.129156 0.099682 1255.57 1312.75 1.001
r(C<->G){all} 0.063888 0.000111 0.043729 0.084755 0.063368 1056.29 1114.94 1.000
r(C<->T){all} 0.458501 0.000715 0.404940 0.507943 0.458767 967.32 1106.76 1.001
r(G<->T){all} 0.072860 0.000183 0.047442 0.099632 0.072295 956.79 1033.74 1.000
pi(A){all} 0.291557 0.000053 0.277518 0.305812 0.291638 1166.55 1171.95 1.000
pi(C){all} 0.276841 0.000052 0.261886 0.289597 0.276740 996.76 1104.02 1.000
pi(G){all} 0.238748 0.000047 0.225209 0.251915 0.238610 1111.39 1138.52 1.000
pi(T){all} 0.192854 0.000038 0.181837 0.205375 0.192686 1099.82 1154.78 1.000
alpha{1,2} 0.094555 0.001861 0.002847 0.159969 0.100923 798.89 903.57 1.001
alpha{3} 2.890363 0.825780 1.419002 4.742718 2.747890 1209.37 1250.82 1.000
pinvar{all} 0.216060 0.005125 0.084346 0.351990 0.216533 694.19 788.68 1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.
Setting sumt conformat to Simple
--- CODEML SUMMARY
Model 1: NearlyNeutral -8080.18077
Model 2: PositiveSelection -8080.18077
Model 0: one-ratio -8093.256365
Model 3: discrete -8076.033585
Model 7: beta -8076.711505
Model 8: beta&w>1 -8076.711686
Model 0 vs 1 26.151190000000497
Model 2 vs 1 0.0
Model 8 vs 7 3.619999988586642E-4
>C1
MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVDIPTSSRLAAEREEQQLS
RQDVGRLSYQSIHRMLRDENEPDSFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLESSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDAGQSNGASVSGRVDLKTEYLQ
FHNFYENFSSRECGIRKPENDTKPPSCSLTRASATLTTTPRSMSKVEKSQ
EAQATATSVEVAAATAATSEKTGIQATSAAQSTAAATTAEREAIATATSS
DTTATPTLAAAAAIQSAGNIPAQLTTKTLRPTETTSLAQLQRRQQMPGMP
AKTTETPAKNLPSLAQTKATTALPILATRDAATATTEINSDKPTNISGAT
KTVATSAAEIATPPAIEVPQTILAGKKSDKMPADKAHETLLKYPTRDTSG
QVATTPHKHATLQLHVKDRHLIGTPLLMHKGDVLLVDAEQLLLPGTATVA
DADSEVLDPSQQHQSAEQEKHQSATDKRQADAINGDTKSPAKGHKKKPSL
SIKKMTYSTKHAAKTVEDMAATSKTPQHQHSSVNTPKEAAPEELSTFAQL
KAYVELKSESKPEHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLA
HVYRCELPWQRSNRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPA
RLQKWHHSTRREAPYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSS
SSGSSRSSLHSPSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCR
TDRVAATDLGGTTEAVPSSAAAIKSVSSRLMTPSSRRLNIWooooooooo
ooooooo
>C2
MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVVIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLSIAEWASPCRSVDVGQSNGASVSGRVDLKTEYLQ
FHNFYENFSSRECGIRKPENDTKPPSCSLTRAAATLTTTPRSMSKVKKSQ
EAQPTATSVEVAAAAAATSEKTDIHATPAAAPSAQSTAAATTAEREAIAT
ATSSDTTATPTLAAAAAMQSAGNIPAQLTTKTLRPTETTSLAQLQRRQQM
PGMPAKTTETPAKNLPSLAQTKATTALPILATRDAATATTEINSDKPTNI
SGATKTVATSAAEIATPPAIEVPQTILAGKKSDKMPADKAHETLLKYPTR
DTSGQVATTPHKHATLQLHVKDRHLIGTPLLMHKGDVLLVDAEQLLLPGT
ATVADADSEVLDPSQQHQSAEQEKHQSATDKRQADAINGDTKSPAKSHKK
KPSLSIKKMTYSTKHAAKTVEDMAATSKTPQHQHSSVNTPKEAAPEELST
FAQLKAYVELKSESKPEHLMDQREENHHNLTGNHPGVMLLVACVLFIVLL
AGLAHVYRCELPWQRSNRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNG
GDPARLQKWHHSTRREAPYSSPLHNLQARELQQQRCQQFYSSSLADKSSS
TSSSSSGSSRSSLHSPSRDDSYYIEMAPSSPAAANLPSLPMELLGSRSNA
YGCRTDRVAATDLGGTTEAVPSSAAAIKSVSSRLMTPSSRRLNIWooooo
ooooooo
>C3
MVKIVNQHCDLGLALLLVWTWLTRLVVATHLVDIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLKTFNSTGGQWKGDFQVITAMDLSSNQLENVSLDNFNQLRQLDLG
NNSLEVIPLSLVDNNKSLPLVTLDLSCNEFRQISTNFFAQRLPQLKHLNL
AHNELVNISRESFYNLLELQTLILSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSSNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSSGASVSGRVDLKTEYLQ
FHNFYVNFSSRGCVIRKPENDTKLPSCSLTRAAAASTTTPGSMSKVKKSK
ETQAPATSVEVAEATAAISEKTDTQATSAAAADTAEQSTAAATTAEKEAI
PTATSSDTTATPALAAAAAAAAAAMQSAGNSLAQLTTKTLRPTETTSLAQ
LQRRQQMPGMPAKTTETPAKNLPSLAQTMATTALPILATRDADTATTEIN
SDKPTNISGATKTAATSAAEIPTTPAIEVPQTILAGKKSDKMPADKAQET
LLKYPTRDTSGQVATPPHKHATLQLHVKDRHLIGTPLLMHKGDVLLVDAE
QLLLPGTATVADADADSEVLDSSQQHQSAEQEKHQPATDKRQADAINGDT
KSPKSHKKKPSLSIKKMTYTTKHVAKAAEDMAATAKTSQHQHSSVNTPKE
STPEELSTFAQLKAFVELKSESKPEHLMDQREENHHNLTGNHPGVMLLVA
CVLFIVLLAGLAHVYRCELPWQRSSRSGQSRPHHQRHLNETDDAHSFLHY
QGSVNSNGGDPARLQKWHHSTRREAPYSSPLHNLQARELQQQRCQQFYSS
SLADKSSSTSSSSSGSSRSSLHSPSRDDSYYIEMAPSSPPAAHLPSLPME
LLGSRSNVLGCRVDRVAATDLGGTTEAVPSSAATIKSVSSRLMTPSSRRL
NIWoooo
>C4
MVKIVNQHCDLGLALLFAWTWLTRLVVAAHLVDIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASIRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDCQVITAMDLSSNQLESISLDKFNQLRQLDLG
NNSLEVIPLSLADNNKSLPFVTLDLSCNKFCQMSTSFFAQRLPLLKHLNL
AHNELVNISRESFYNLLELQTLVLSHNKISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLRLADNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPAQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGPSVSGRVDLKTEYLQ
FHNFNENFSSRECGIRKPENYTMPPSCSVIRAAATSTTTPRSMSKVKKSK
EAQATATSVEVAAATAATSEKTDIQGTSAAQSTAAATTAEKETIPTATSS
DTTATPTLAAATMQSAGNSLAQLTTKTLRPTETTSLAQLQRRQQMPGMPA
KTTETPAKNLPSLAQTKATTALPILATRDAGTATTEINSDNPTSISGATK
TAAASAAEIATTPAIEVPQTILAGKKSDKMPADKAQETLLKYPTRDTSGQ
IATPPHKHATLQLHVKDRHLIGTPLLMHKGDVLLVDAEQLLLPGTATVAD
ADSEVLDSSQQHQSAEQEKHQSATDKRQADAINGDTKAPAKSHKKKPSLS
IKKMTYSTKHAAKTVEDMAATSKTPQHQHSSVNTPKEAIPEELSTFAQLK
AYVELKSESKPEHLMDQREGTHHNLTGNHPGVMLLVSCVLFIVLLAGLAH
VYRCELPWQRSSRSGQSRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPAR
LQKWHHCTRREAPYSSPLHNLQARELQQQRCQQFYSSSLADRSSSTSSSS
PGSSRSSLHSNSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCRA
DRVAATDLGGTTEAVPSSAATIKSVSSRLMTPSSRRLNIWoooooooooo
ooooooo
>C5
MVKIVNRHCDLGLALLLAWTWLTRQVVSAHLVDIPTSSRQAAEREEQQLS
LQNGGGLSYPSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRNFNSSGGQWKGDFQVITGMDLSSNQLESLSLNNFNQLRQLDLG
NNSLEVIPLSLADTNKSLPFVTLDLSCNKFSQLYTNFFVQRLPELKNLNL
AYNQLLNISRESFYNLLELQTLILSHNNITDIDYETFLALPNLQHLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPNSLPPSLEHLFLQHNQIMELPPQTFV
GLVNLQTLDLSHNRLIFLPALALPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGRSPSGWVDLKTEYLQ
FHNFYDNFSSRECGARKPENDTKPPSCSLTSATAALTTTSRTMSKVKKSK
GADTTAAAAAVATSEKHTAHTTDDTQATSASTQPTTGATSAEKAAIPTAT
PTSPTAMQSAGNSVAQLTTKTLRPTETTSLEQLQQRQQMPGMPAKTTATP
AKNLPSLAQTKATTAVPILAAPAAATTPAAAATTTTTTAATAINSNKPTN
ISGATKTATEMVAAPPAIEVPQTILAGKKSDKMPTDKAHETLLKYPTRDT
SGQAAASAAAAATLSHKHATLQLHVKDRHLIGTPLLMHKGDVLLVDAEQL
LLPGTATVADADSEVLDSSQQQHQSAEQEKHQSAADKRQAEAINGDSKSS
SSSPPKSHKKKPSLSIKKMTYSTKHAVKAVEELQATSKTPQHQHSSVNTP
KEASPEELSTFAQLKAYVELKSESKPEHLMDQREENLHNLTGNHPGVMLL
VACVLFIVLLAGLAHVYRCELPWQRSNRPGQMRPHHQRHLNDTDDAHSFL
HYQGSVNSNGGDPARLQKWHHSTRREAPYSSPLHNLQARELQQQRCQQFY
SSSLADKSSSTASSSSLSGSSRSSLHSPSRDDSYYIEMAPSNPPSATLPS
LPMELLGSRSNGLGSRTDRVAATDLGGTTAAVPSSATAIKSVSSRLMAPS
SRRLGIW
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=5, Len=1198
C1 MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVDIPTSSRLAAEREEQQLS
C2 MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVVIPTSSRLAAEREELQLS
C3 MVKIVNQHCDLGLALLLVWTWLTRLVVATHLVDIPTSSRLAAEREELQLS
C4 MVKIVNQHCDLGLALLFAWTWLTRLVVAAHLVDIPTSSRLAAEREELQLS
C5 MVKIVNRHCDLGLALLLAWTWLTRQVVSAHLVDIPTSSRQAAEREEQQLS
******:*********:.****** **::*** ****** ****** ***
C1 RQDVGRLSYQSIHRMLRDENEPDSFRGELRYQQKRHKRELELNAPANKLN
C2 RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
C3 RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
C4 RQDVGRLSYQSIHRMLRDENEPASIRGELRYQQKRHKRELELNAPANKLN
C5 LQNGGGLSYPSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
*: * *** ************ *:*************************
C1 LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
C2 LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
C3 LTHRDLKTFNSTGGQWKGDFQVITAMDLSSNQLENVSLDNFNQLRQLDLG
C4 LTHRDLRTFNSTGGQWKGDCQVITAMDLSSNQLESISLDKFNQLRQLDLG
C5 LTHRDLRNFNSSGGQWKGDFQVITGMDLSSNQLESLSLNNFNQLRQLDLG
******:.***:******* ****.*********.:**::**********
C1 NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
C2 NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
C3 NNSLEVIPLSLVDNNKSLPLVTLDLSCNEFRQISTNFFAQRLPQLKHLNL
C4 NNSLEVIPLSLADNNKSLPFVTLDLSCNKFCQMSTSFFAQRLPLLKHLNL
C5 NNSLEVIPLSLADTNKSLPFVTLDLSCNKFSQLYTNFFVQRLPELKNLNL
***********.*.* ***:********:* *: *.**.**** **:***
C1 AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
C2 AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
C3 AHNELVNISRESFYNLLELQTLILSHNNISDIDYETFLALPNLQYLDLSH
C4 AHNELVNISRESFYNLLELQTLVLSHNKISDIDYETFLALPNLQYLDLSH
C5 AYNQLLNISRESFYNLLELQTLILSHNNITDIDYETFLALPNLQHLDLSH
*:*:*:****************:****:*:**************:*****
C1 NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
C2 NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
C3 NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
C4 NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
C5 NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
**************************:***********************
C1 LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
C2 LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
C3 LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
C4 LCQVPAALAQSVRTLRLADNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
C5 LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
***************:*:********************************
C1 DDALGRLELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
C2 DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
C3 DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
C4 DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPAQAFV
C5 DDALGRLELLESLFLDHNLLMRVPNSLPPSLEHLFLQHNQIMELPPQTFV
****************:*******.********************.*:**
C1 GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLESSGVESVSQSIVHTLPQL
C2 GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
C3 GLVNLQTLDLSSNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
C4 GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
C5 GLVNLQTLDLSHNRLIFLPALALPKLLTLNLQSSGVESVSQSIVHTLPQL
*********** *******.*:*********:******************
C1 RDLLLEDNPIKCSDLLGIAEWASPCRSVDAGQSNGASVSGRVDLKTEYLQ
C2 RDLLLEDNPIKCSDLLSIAEWASPCRSVDVGQSNGASVSGRVDLKTEYLQ
C3 RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSSGASVSGRVDLKTEYLQ
C4 RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGPSVSGRVDLKTEYLQ
C5 RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGRSPSGWVDLKTEYLQ
****************.************.***.* * ** *********
C1 FHNFYENFSSRECGIRKPENDTKPPSCSLTRASATLTTTPRSMSKVEKSQ
C2 FHNFYENFSSRECGIRKPENDTKPPSCSLTRAAATLTTTPRSMSKVKKSQ
C3 FHNFYVNFSSRGCVIRKPENDTKLPSCSLTRAAAASTTTPGSMSKVKKSK
C4 FHNFNENFSSRECGIRKPENYTMPPSCSVIRAAATSTTTPRSMSKVKKSK
C5 FHNFYDNFSSRECGARKPENDTKPPSCSLTSATAALTTTSRTMSKVKKSK
**** ***** * ***** * ****: *:*: ***. :****:**:
C1 EAQATATSVEVAAATAATSEKTG-IQAT------SAAQSTAAATTAEREA
C2 EAQPTATSVEVAAAAAATSEKTD-IHATPAAA--PSAQSTAAATTAEREA
C3 ETQAPATSVEVAEATAAISEKTD-TQATSAAAADTAEQSTAAATTAEKEA
C4 EAQATATSVEVAAATAATSEKTD-IQGTSAA------QSTAAATTAEKET
C5 GADTTAAAAAVATSEKHTAHTTDDTQATSAS-----TQPTTGATSAEKAA
::..*::. ** : :..*. :.* *.*:.**:**: :
C1 IATATSSDTTATPTLAAAAA-----IQSAGNIPAQLTTKTLRPTETTSLA
C2 IATATSSDTTATPTLAAAAA-----MQSAGNIPAQLTTKTLRPTETTSLA
C3 IPTATSSDTTATPALAAAAAAAAAAMQSAGNSLAQLTTKTLRPTETTSLA
C4 IPTATSSDTTATPTLAAAT------MQSAGNSLAQLTTKTLRPTETTSLA
C5 IPTATPTSPTA--------------MQSAGNSVAQLTTKTLRPTETTSLE
*.***.:..** :***** ****************
C1 QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAAT-----
C2 QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAAT-----
C3 QLQRRQQMPGMPAKTTETPAKNLPSLAQTMATTALPILATRDADT-----
C4 QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAGT-----
C5 QLQQRQQMPGMPAKTTATPAKNLPSLAQTKATTAVPILAAPAAATTPAAA
***:************ ************ ****:****: * *
C1 -------ATTEINSDKPTNISGATKTVATSAAEIATPPAIEVPQTILAGK
C2 -------ATTEINSDKPTNISGATKTVATSAAEIATPPAIEVPQTILAGK
C3 -------ATTEINSDKPTNISGATKTAATSAAEIPTTPAIEVPQTILAGK
C4 -------ATTEINSDNPTSISGATKTAAASAAEIATTPAIEVPQTILAGK
C5 ATTTTTTAATAINSNKPTNISGATKTAT---EMVAAPPAIEVPQTILAGK
*:* ***::**.*******.: :.:.*************
C1 KSDKMPADKAHETLLKYPTRDTSGQVATTP-------HKHATLQLHVKDR
C2 KSDKMPADKAHETLLKYPTRDTSGQVATTP-------HKHATLQLHVKDR
C3 KSDKMPADKAQETLLKYPTRDTSGQVATPP-------HKHATLQLHVKDR
C4 KSDKMPADKAQETLLKYPTRDTSGQIATPP-------HKHATLQLHVKDR
C5 KSDKMPTDKAHETLLKYPTRDTSGQAAASAAAAATLSHKHATLQLHVKDR
******:***:************** *:.. *************
C1 HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDPSQQ-HQSA
C2 HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDPSQQ-HQSA
C3 HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADADSEVLDSSQQ-HQSA
C4 HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDSSQQ-HQSA
C5 HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDSSQQQHQSA
**********************************: ****.*** ****
C1 EQEKHQSATDKRQADAINGDT----KSPAKGHKKKPSLSIKKMTYSTKHA
C2 EQEKHQSATDKRQADAINGDT----KSPAKSHKKKPSLSIKKMTYSTKHA
C3 EQEKHQPATDKRQADAINGDT----KSP-KSHKKKPSLSIKKMTYTTKHV
C4 EQEKHQSATDKRQADAINGDT----KAPAKSHKKKPSLSIKKMTYSTKHA
C5 EQEKHQSAADKRQAEAINGDSKSSSSSPPKSHKKKPSLSIKKMTYSTKHA
******.*:*****:*****: .:* *.**************:***.
C1 AKTVEDMAATSKTPQHQHSSVNTPKEAAPEELSTFAQLKAYVELKSESKP
C2 AKTVEDMAATSKTPQHQHSSVNTPKEAAPEELSTFAQLKAYVELKSESKP
C3 AKAAEDMAATAKTSQHQHSSVNTPKESTPEELSTFAQLKAFVELKSESKP
C4 AKTVEDMAATSKTPQHQHSSVNTPKEAIPEELSTFAQLKAYVELKSESKP
C5 VKAVEELQATSKTPQHQHSSVNTPKEASPEELSTFAQLKAYVELKSESKP
.*:.*:: **:**.************: ************:*********
C1 EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
C2 EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
C3 EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
C4 EHLMDQREGTHHNLTGNHPGVMLLVSCVLFIVLLAGLAHVYRCELPWQRS
C5 EHLMDQREENLHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
******** . **************:************************
C1 NRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
C2 NRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
C3 SRSGQSRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
C4 SRSGQSRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHCTRRE
C5 NRPGQMRPHHQRHLNDTDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
.*.** *********:*****************************.****
C1 APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSS--SGSSRSSLH
C2 APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSS--SGSSRSSLH
C3 APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSS--SGSSRSSLH
C4 APYSSPLHNLQARELQQQRCQQFYSSSLADRSSSTSSSS--PGSSRSSLH
C5 APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTASSSSLSGSSRSSLH
******************************:****:*** .********
C1 SPSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCRTDRVAATDLG
C2 SPSRDDSYYIEMAPSSPAAANLPSLPMELLGSRSNAYGCRTDRVAATDLG
C3 SPSRDDSYYIEMAPSSPPAAHLPSLPMELLGSRSNVLGCRVDRVAATDLG
C4 SNSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCRADRVAATDLG
C5 SPSRDDSYYIEMAPSNPPSATLPSLPMELLGSRSNGLGSRTDRVAATDLG
* *************.*.:* ************** *.*.*********
C1 GTTEAVPSSAAAIKSVSSRLMTPSSRRLNIWoooooooooooooooo-
C2 GTTEAVPSSAAAIKSVSSRLMTPSSRRLNIWoooooooooooo-----
C3 GTTEAVPSSAATIKSVSSRLMTPSSRRLNIWoooo-------------
C4 GTTEAVPSSAATIKSVSSRLMTPSSRRLNIWooooooooooooooooo
C5 GTTAAVPSSATAIKSVSSRLMAPSSRRLGIW-----------------
*** ******::*********:******.**
PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
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-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
ns S [0] default
-proxy S [0] unset
-email S [0]
-clean_overaln D [0] 0
-overaln_param S [0]
-overaln_mode S [0]
-overaln_model S [0]
-overaln_threshold D [0] 0
-overaln_target D [0] 0
-overaln_P1 D [0] 0
-overaln_P2 D [0] 0
-overaln_P3 D [0] 0
-overaln_P4 D [0] 0
-exon_boundaries S [0]
-dump S [0] no
-display D [0] 100
INPUT FILES
Input File (S) /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln
Input File (M) proba_pair
Identify Master Sequences [no]:
Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES [PROTEIN]
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1157 type PROTEIN Struct Unchecked
Input File /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1157 type PROTEIN Struct Unchecked
Multi Core Mode: 72 processors:
--- Process Method/Library/Aln S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
--- Process Method/Library/Aln Mproba_pair
xxx Retrieved S/opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
xxx Retrieved Mproba_pair
All Methods Retrieved
MANUAL PENALTIES: gapopen=0 gapext=0
Library Total Size: [26054]
Library Relaxation: Multi_proc [72]
Relaxation Summary: [26054]--->[24770]
UN-WEIGHTED MODE: EVERY SEQUENCE WEIGHTS 1
OUTPUT RESULTS
#### File Type= MSA Format= score_ascii Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii
#### File Type= MSA Format= html Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.html
#### File Type= MSA Format= score_ascii Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii
# Command Line: t_coffee_ADOPS -infile /opt/ADOPS/1/2mit-PD/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln -output score_ascii -special_mode evaluate -evaluate_mode t_coffee_fast [PROGRAM:T-COFFEE]
# T-COFFEE Memory Usage: Current= 29.492 Mb, Max= 31.431 Mb
# Results Produced with T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
# T-COFFEE is available from http://www.tcoffee.org
# Register on: https://groups.google.com/group/tcoffee/
>C1
MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVDIPTSSRLAAEREEQQLS
RQDVGRLSYQSIHRMLRDENEPDSFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLESSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDAGQSNGASVSGRVDLKTEYLQ
FHNFYENFSSRECGIRKPENDTKPPSCSLTRASATLTTTPRSMSKVEKSQ
EAQATATSVEVAAATAATSEKTG-IQAT------SAAQSTAAATTAEREA
IATATSSDTTATPTLAAAAA-----IQSAGNIPAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAAT-----
-------ATTEINSDKPTNISGATKTVATSAAEIATPPAIEVPQTILAGK
KSDKMPADKAHETLLKYPTRDTSGQVATTP-------HKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDPSQQ-HQSA
EQEKHQSATDKRQADAINGDT----KSPAKGHKKKPSLSIKKMTYSTKHA
AKTVEDMAATSKTPQHQHSSVNTPKEAAPEELSTFAQLKAYVELKSESKP
EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
NRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSS--SGSSRSSLH
SPSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCRTDRVAATDLG
GTTEAVPSSAAAIKSVSSRLMTPSSRRLNIWoooooooooooooooo-
>C2
MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVVIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLSIAEWASPCRSVDVGQSNGASVSGRVDLKTEYLQ
FHNFYENFSSRECGIRKPENDTKPPSCSLTRAAATLTTTPRSMSKVKKSQ
EAQPTATSVEVAAAAAATSEKTD-IHATPAAA--PSAQSTAAATTAEREA
IATATSSDTTATPTLAAAAA-----MQSAGNIPAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAAT-----
-------ATTEINSDKPTNISGATKTVATSAAEIATPPAIEVPQTILAGK
KSDKMPADKAHETLLKYPTRDTSGQVATTP-------HKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDPSQQ-HQSA
EQEKHQSATDKRQADAINGDT----KSPAKSHKKKPSLSIKKMTYSTKHA
AKTVEDMAATSKTPQHQHSSVNTPKEAAPEELSTFAQLKAYVELKSESKP
EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
NRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSS--SGSSRSSLH
SPSRDDSYYIEMAPSSPAAANLPSLPMELLGSRSNAYGCRTDRVAATDLG
GTTEAVPSSAAAIKSVSSRLMTPSSRRLNIWoooooooooooo-----
>C3
MVKIVNQHCDLGLALLLVWTWLTRLVVATHLVDIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLKTFNSTGGQWKGDFQVITAMDLSSNQLENVSLDNFNQLRQLDLG
NNSLEVIPLSLVDNNKSLPLVTLDLSCNEFRQISTNFFAQRLPQLKHLNL
AHNELVNISRESFYNLLELQTLILSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSSNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSSGASVSGRVDLKTEYLQ
FHNFYVNFSSRGCVIRKPENDTKLPSCSLTRAAAASTTTPGSMSKVKKSK
ETQAPATSVEVAEATAAISEKTD-TQATSAAAADTAEQSTAAATTAEKEA
IPTATSSDTTATPALAAAAAAAAAAMQSAGNSLAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTMATTALPILATRDADT-----
-------ATTEINSDKPTNISGATKTAATSAAEIPTTPAIEVPQTILAGK
KSDKMPADKAQETLLKYPTRDTSGQVATPP-------HKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADADSEVLDSSQQ-HQSA
EQEKHQPATDKRQADAINGDT----KSP-KSHKKKPSLSIKKMTYTTKHV
AKAAEDMAATAKTSQHQHSSVNTPKESTPEELSTFAQLKAFVELKSESKP
EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
SRSGQSRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSS--SGSSRSSLH
SPSRDDSYYIEMAPSSPPAAHLPSLPMELLGSRSNVLGCRVDRVAATDLG
GTTEAVPSSAATIKSVSSRLMTPSSRRLNIWoooo-------------
>C4
MVKIVNQHCDLGLALLFAWTWLTRLVVAAHLVDIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASIRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDCQVITAMDLSSNQLESISLDKFNQLRQLDLG
NNSLEVIPLSLADNNKSLPFVTLDLSCNKFCQMSTSFFAQRLPLLKHLNL
AHNELVNISRESFYNLLELQTLVLSHNKISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLRLADNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPAQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGPSVSGRVDLKTEYLQ
FHNFNENFSSRECGIRKPENYTMPPSCSVIRAAATSTTTPRSMSKVKKSK
EAQATATSVEVAAATAATSEKTD-IQGTSAA------QSTAAATTAEKET
IPTATSSDTTATPTLAAAT------MQSAGNSLAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAGT-----
-------ATTEINSDNPTSISGATKTAAASAAEIATTPAIEVPQTILAGK
KSDKMPADKAQETLLKYPTRDTSGQIATPP-------HKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDSSQQ-HQSA
EQEKHQSATDKRQADAINGDT----KAPAKSHKKKPSLSIKKMTYSTKHA
AKTVEDMAATSKTPQHQHSSVNTPKEAIPEELSTFAQLKAYVELKSESKP
EHLMDQREGTHHNLTGNHPGVMLLVSCVLFIVLLAGLAHVYRCELPWQRS
SRSGQSRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHCTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADRSSSTSSSS--PGSSRSSLH
SNSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCRADRVAATDLG
GTTEAVPSSAATIKSVSSRLMTPSSRRLNIWooooooooooooooooo
>C5
MVKIVNRHCDLGLALLLAWTWLTRQVVSAHLVDIPTSSRQAAEREEQQLS
LQNGGGLSYPSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRNFNSSGGQWKGDFQVITGMDLSSNQLESLSLNNFNQLRQLDLG
NNSLEVIPLSLADTNKSLPFVTLDLSCNKFSQLYTNFFVQRLPELKNLNL
AYNQLLNISRESFYNLLELQTLILSHNNITDIDYETFLALPNLQHLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPNSLPPSLEHLFLQHNQIMELPPQTFV
GLVNLQTLDLSHNRLIFLPALALPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGRSPSGWVDLKTEYLQ
FHNFYDNFSSRECGARKPENDTKPPSCSLTSATAALTTTSRTMSKVKKSK
GADTTAAAAAVATSEKHTAHTTDDTQATSAS-----TQPTTGATSAEKAA
IPTATPTSPTA--------------MQSAGNSVAQLTTKTLRPTETTSLE
QLQQRQQMPGMPAKTTATPAKNLPSLAQTKATTAVPILAAPAAATTPAAA
ATTTTTTAATAINSNKPTNISGATKTAT---EMVAAPPAIEVPQTILAGK
KSDKMPTDKAHETLLKYPTRDTSGQAAASAAAAATLSHKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDSSQQQHQSA
EQEKHQSAADKRQAEAINGDSKSSSSSPPKSHKKKPSLSIKKMTYSTKHA
VKAVEELQATSKTPQHQHSSVNTPKEASPEELSTFAQLKAYVELKSESKP
EHLMDQREENLHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
NRPGQMRPHHQRHLNDTDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTASSSSLSGSSRSSLH
SPSRDDSYYIEMAPSNPPSATLPSLPMELLGSRSNGLGSRTDRVAATDLG
GTTAAVPSSATAIKSVSSRLMAPSSRRLGIW-----------------
FORMAT of file /tmp/tmp1506833237826868836aln Not Supported[FATAL:T-COFFEE]
>C1
MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVDIPTSSRLAAEREEQQLS
RQDVGRLSYQSIHRMLRDENEPDSFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLESSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDAGQSNGASVSGRVDLKTEYLQ
FHNFYENFSSRECGIRKPENDTKPPSCSLTRASATLTTTPRSMSKVEKSQ
EAQATATSVEVAAATAATSEKTG-IQAT------SAAQSTAAATTAEREA
IATATSSDTTATPTLAAAAA-----IQSAGNIPAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAAT-----
-------ATTEINSDKPTNISGATKTVATSAAEIATPPAIEVPQTILAGK
KSDKMPADKAHETLLKYPTRDTSGQVATTP-------HKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDPSQQ-HQSA
EQEKHQSATDKRQADAINGDT----KSPAKGHKKKPSLSIKKMTYSTKHA
AKTVEDMAATSKTPQHQHSSVNTPKEAAPEELSTFAQLKAYVELKSESKP
EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
NRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSS--SGSSRSSLH
SPSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCRTDRVAATDLG
GTTEAVPSSAAAIKSVSSRLMTPSSRRLNIWoooooooooooooooo-
>C2
MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVVIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLSIAEWASPCRSVDVGQSNGASVSGRVDLKTEYLQ
FHNFYENFSSRECGIRKPENDTKPPSCSLTRAAATLTTTPRSMSKVKKSQ
EAQPTATSVEVAAAAAATSEKTD-IHATPAAA--PSAQSTAAATTAEREA
IATATSSDTTATPTLAAAAA-----MQSAGNIPAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAAT-----
-------ATTEINSDKPTNISGATKTVATSAAEIATPPAIEVPQTILAGK
KSDKMPADKAHETLLKYPTRDTSGQVATTP-------HKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDPSQQ-HQSA
EQEKHQSATDKRQADAINGDT----KSPAKSHKKKPSLSIKKMTYSTKHA
AKTVEDMAATSKTPQHQHSSVNTPKEAAPEELSTFAQLKAYVELKSESKP
EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
NRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSS--SGSSRSSLH
SPSRDDSYYIEMAPSSPAAANLPSLPMELLGSRSNAYGCRTDRVAATDLG
GTTEAVPSSAAAIKSVSSRLMTPSSRRLNIWoooooooooooo-----
>C3
MVKIVNQHCDLGLALLLVWTWLTRLVVATHLVDIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLKTFNSTGGQWKGDFQVITAMDLSSNQLENVSLDNFNQLRQLDLG
NNSLEVIPLSLVDNNKSLPLVTLDLSCNEFRQISTNFFAQRLPQLKHLNL
AHNELVNISRESFYNLLELQTLILSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSSNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSSGASVSGRVDLKTEYLQ
FHNFYVNFSSRGCVIRKPENDTKLPSCSLTRAAAASTTTPGSMSKVKKSK
ETQAPATSVEVAEATAAISEKTD-TQATSAAAADTAEQSTAAATTAEKEA
IPTATSSDTTATPALAAAAAAAAAAMQSAGNSLAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTMATTALPILATRDADT-----
-------ATTEINSDKPTNISGATKTAATSAAEIPTTPAIEVPQTILAGK
KSDKMPADKAQETLLKYPTRDTSGQVATPP-------HKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADADSEVLDSSQQ-HQSA
EQEKHQPATDKRQADAINGDT----KSP-KSHKKKPSLSIKKMTYTTKHV
AKAAEDMAATAKTSQHQHSSVNTPKESTPEELSTFAQLKAFVELKSESKP
EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
SRSGQSRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSS--SGSSRSSLH
SPSRDDSYYIEMAPSSPPAAHLPSLPMELLGSRSNVLGCRVDRVAATDLG
GTTEAVPSSAATIKSVSSRLMTPSSRRLNIWoooo-------------
>C4
MVKIVNQHCDLGLALLFAWTWLTRLVVAAHLVDIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASIRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDCQVITAMDLSSNQLESISLDKFNQLRQLDLG
NNSLEVIPLSLADNNKSLPFVTLDLSCNKFCQMSTSFFAQRLPLLKHLNL
AHNELVNISRESFYNLLELQTLVLSHNKISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLRLADNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPAQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGPSVSGRVDLKTEYLQ
FHNFNENFSSRECGIRKPENYTMPPSCSVIRAAATSTTTPRSMSKVKKSK
EAQATATSVEVAAATAATSEKTD-IQGTSAA------QSTAAATTAEKET
IPTATSSDTTATPTLAAAT------MQSAGNSLAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAGT-----
-------ATTEINSDNPTSISGATKTAAASAAEIATTPAIEVPQTILAGK
KSDKMPADKAQETLLKYPTRDTSGQIATPP-------HKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDSSQQ-HQSA
EQEKHQSATDKRQADAINGDT----KAPAKSHKKKPSLSIKKMTYSTKHA
AKTVEDMAATSKTPQHQHSSVNTPKEAIPEELSTFAQLKAYVELKSESKP
EHLMDQREGTHHNLTGNHPGVMLLVSCVLFIVLLAGLAHVYRCELPWQRS
SRSGQSRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHCTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADRSSSTSSSS--PGSSRSSLH
SNSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCRADRVAATDLG
GTTEAVPSSAATIKSVSSRLMTPSSRRLNIWooooooooooooooooo
>C5
MVKIVNRHCDLGLALLLAWTWLTRQVVSAHLVDIPTSSRQAAEREEQQLS
LQNGGGLSYPSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRNFNSSGGQWKGDFQVITGMDLSSNQLESLSLNNFNQLRQLDLG
NNSLEVIPLSLADTNKSLPFVTLDLSCNKFSQLYTNFFVQRLPELKNLNL
AYNQLLNISRESFYNLLELQTLILSHNNITDIDYETFLALPNLQHLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPNSLPPSLEHLFLQHNQIMELPPQTFV
GLVNLQTLDLSHNRLIFLPALALPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGRSPSGWVDLKTEYLQ
FHNFYDNFSSRECGARKPENDTKPPSCSLTSATAALTTTSRTMSKVKKSK
GADTTAAAAAVATSEKHTAHTTDDTQATSAS-----TQPTTGATSAEKAA
IPTATPTSPTA--------------MQSAGNSVAQLTTKTLRPTETTSLE
QLQQRQQMPGMPAKTTATPAKNLPSLAQTKATTAVPILAAPAAATTPAAA
ATTTTTTAATAINSNKPTNISGATKTAT---EMVAAPPAIEVPQTILAGK
KSDKMPTDKAHETLLKYPTRDTSGQAAASAAAAATLSHKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADS--EVLDSSQQQHQSA
EQEKHQSAADKRQAEAINGDSKSSSSSPPKSHKKKPSLSIKKMTYSTKHA
VKAVEELQATSKTPQHQHSSVNTPKEASPEELSTFAQLKAYVELKSESKP
EHLMDQREENLHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
NRPGQMRPHHQRHLNDTDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTASSSSLSGSSRSSLH
SPSRDDSYYIEMAPSNPPSATLPSLPMELLGSRSNGLGSRTDRVAATDLG
GTTAAVPSSATAIKSVSSRLMAPSSRRLGIW-----------------
input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln I:1198 S:97 BS:1198
# TC_SIMILARITY_MATRIX_FORMAT_01
# SEQ_INDEX C1 0
# SEQ_INDEX C2 1
# SEQ_INDEX C3 2
# SEQ_INDEX C4 3
# SEQ_INDEX C5 4
# PW_SEQ_DISTANCES
BOT 0 1 98.35 C1 C2 98.35
TOP 1 0 98.35 C2 C1 98.35
BOT 0 2 93.62 C1 C3 93.62
TOP 2 0 93.62 C3 C1 93.62
BOT 0 3 94.45 C1 C4 94.45
TOP 3 0 94.45 C4 C1 94.45
BOT 0 4 88.82 C1 C5 88.82
TOP 4 0 88.82 C5 C1 88.82
BOT 1 2 93.73 C2 C3 93.73
TOP 2 1 93.73 C3 C2 93.73
BOT 1 3 94.62 C2 C4 94.62
TOP 3 1 94.62 C4 C2 94.62
BOT 1 4 88.85 C2 C5 88.85
TOP 4 1 88.85 C5 C2 88.85
BOT 2 3 93.53 C3 C4 93.53
TOP 3 2 93.53 C4 C3 93.53
BOT 2 4 87.25 C3 C5 87.25
TOP 4 2 87.25 C5 C3 87.25
BOT 3 4 86.80 C4 C5 86.80
TOP 4 3 86.80 C5 C4 86.80
AVG 0 C1 * 93.81
AVG 1 C2 * 93.89
AVG 2 C3 * 92.03
AVG 3 C4 * 92.35
AVG 4 C5 * 87.93
TOT TOT * 92.00
CLUSTAL W (1.83) multiple sequence alignment
C1 ATGGTGAAAATCGTGAACCAACACTGTGATCTAGGCCTGGCCCTTCTCCT
C2 ATGGTGAAAATCGTGAACCAACACTGTGATCTAGGCCTGGCCCTCCTCCT
C3 ATGGTGAAAATCGTGAACCAACACTGTGATCTAGGCCTGGCCCTCCTCTT
C4 ATGGTGAAAATCGTGAACCAACACTGTGATCTAGGCCTGGCCCTCCTCTT
C5 ATGGTGAAAATTGTGAACCGACACTGTGATCTAGGCCTGGCCCTACTCCT
*********** *******.************************ *** *
C1 GGCCTGGACGTGGCTAACAAGGCTGGTGGTGGCGGCCCATCTGGTCGACA
C2 GGCCTGGACGTGGCTAACAAGGCTGGTGGTGGCGGCCCATCTGGTCGTCA
C3 GGTCTGGACGTGGCTAACAAGGCTGGTGGTGGCGACCCATCTGGTCGACA
C4 TGCCTGGACGTGGCTAACAAGGCTGGTGGTGGCGGCCCATCTGGTCGACA
C5 GGCCTGGACATGGCTAACAAGGCAGGTGGTTTCGGCCCATCTGGTCGATA
* ******.*************:****** **.************: *
C1 TCCCCACCTCATCACGCCTGGCCGCTGAACGGGAGGAGCAGCAGTTGTCC
C2 TCCCCACCTCATCACGCCTGGCCGCCGAACGGGAGGAGCTGCAGTTGTCC
C3 TCCCCACCTCATCACGCCTGGCCGCCGAACGGGAGGAGCTGCAGCTATCC
C4 TCCCCACCTCATCACGCCTGGCCGCCGAGCGGGAGGAGCTGCAGTTATCC
C5 TTCCCACCTCATCTCGCCAGGCTGCCGAACGGGAGGAGCAGCAGTTATCC
* ***********:****:*** ** **.**********:**** *.***
C1 CGGCAGGACGTAGGACGGCTCAGCTACCAGAGTATCCATCGTATGCTGAG
C2 CGGCAGGACGTGGGACGGCTCAGCTACCAAAGTATCCATCGCATGTTGAG
C3 CGGCAGGACGTGGGACGGCTCAGCTACCAGAGTATCCATCGCATGCTGAG
C4 CGGCAGGACGTGGGACGGCTCAGCTACCAGAGTATCCATCGCATGCTGAG
C5 CTGCAGAATGGCGGTGGTCTCAGCTACCCGAGCATTCATCGAATGCTGAG
* ****.* * **: * **********..** ** ***** *** ****
C1 GGACGAAAACGAACCGGATAGCTTTCGGGGGGAATTGCGATACCAACAGA
C2 GGACGAAAACGAACCTGCCAGCTTTCGGGGGGAATTGCGATACCAACAGA
C3 GGACGAAAACGAACCGGCCAGCTTTAGGGGGGAATTGCGATACCAACAGA
C4 GGACGAAAACGAACCGGCCAGCATTCGGGGGGAATTGCGATACCAACAGA
C5 GGACGAAAACGAACCGGCCAGCTTTCGAGGGGAATTACGATACCAACAGA
*************** *. ***:**.*.********.*************
C1 AACGCCACAAAAGGGAGCTGGAGCTGAATGCGCCGGCCAACAAGCTTAAT
C2 AACGCCACAAAAGGGAGCTGGAGCTGAATGCGCCGGCCAACAAGCTTAAT
C3 AACGCCACAAAAGGGAGCTGGAGCTCAATGCTCCGGCAAACAAGCTGAAT
C4 AACGCCACAAAAGGGAGCTGGAGCTGAATGCTCCGGCAAACAAACTTAAT
C5 AACGTCACAAAAGAGAGTTGGAGCTGAATGCTCCAGCCAACAAGCTTAAT
**** ********.*** ******* ***** **.**.*****.** ***
C1 CTCACCCACCGCGATTTGAGGACATTCAATAGCACTGGTGGTCAGTGGAA
C2 CTCACCCACCGCGACTTAAGGACATTCAATAGCACTGGCGGTCAGTGGAA
C3 CTCACCCACCGCGACTTAAAAACATTCAATAGCACTGGTGGTCAGTGGAA
C4 CTCACCCACCGCGACTTGAGGACATTCAATAGCACTGGTGGTCAGTGGAA
C5 CTCACCCACCGCGACTTGAGGAACTTTAATAGCAGTGGTGGTCAGTGGAA
************** **.*..*..** ******* *** ***********
C1 GGGCGACTTTCAAGTGATCACCGCCATGGATCTGAGCAGCAATCAACTGG
C2 GGGGGACTTTCAAGTGATCACCGCCATGGATCTGAGCAGCAATCAACTGG
C3 GGGCGACTTTCAGGTCATCACCGCCATGGATCTGAGCAGCAATCAACTGG
C4 GGGCGACTGTCAGGTGATCACAGCCATGGATCTGAGCAGCAATCAACTGG
C5 GGGTGACTTTCAGGTGATCACTGGTATGGATCTGAGTAGTAATCAACTGG
*** **** ***.** ***** * *********** ** **********
C1 AGAGCCTCAGCTTGGACAACTTCAATCAACTGAGGCAGCTGGACTTGGGA
C2 AGAGCCTCAGCTTGGACAACTTCAATCAACTGAGGCAGCTGGACTTGGGT
C3 AGAACGTCAGCTTGGACAACTTCAATCAACTAAGGCAGCTGGACTTGGGC
C4 AGAGCATCAGCTTGGACAAATTCAATCAACTAAGGCAGCTGGACTTGGGC
C5 AAAGTCTCAGTTTGAACAACTTCAATCAGCTGAGGCAACTGGATTTGGGT
*.*. **** ***.****.********.**.*****.***** *****
C1 AATAACTCCCTGGAGGTAATACCCTTGAGTTTGGCAGACACCAATATGTC
C2 AACAACTCCCTGGAGGTTATACCCTTAAGTTTGGCAGACACCAATATGTC
C3 AATAACTCCCTGGAGGTTATACCCCTGAGTTTGGTCGACAACAATAAGTC
C4 AATAACTCCCTGGAGGTTATACCCCTGAGCTTGGCCGACAACAATAAGTC
C5 AACAACTCTTTGGAGGTTATACCTCTGAGCTTAGCTGATACCAACAAATC
** ***** *******:***** *.** **.* ** *.*** *:.**
C1 ACTACCCTTTGTGACGCTCGATCTTTCCTGCAACAAATTCAGCCAAATTT
C2 ACTACCCTTTGTGACGCTCGATCTTTCCTGCAACAAATTCAGCCAAATTT
C3 ACTACCCCTTGTAACGCTCGATCTATCCTGCAACGAATTCAGACAAATTT
C4 ACTACCCTTTGTAACGCTCGATCTATCCTGTAATAAATTCTGCCAAATGT
C5 ACTTCCGTTCGTAACACTCGATCTTTCCTGCAACAAATTCAGCCAACTTT
***:** * **.**.********:***** ** .*****:*.***.* *
C1 CTACGAGCTTTTTTGCCCAGCGATTGCCTCAGTTGAAAAATCTGAATCTG
C2 CTACGAGCTTTTTTGCCCAGAGATTGCCTCAGTTGAAAAATCTGAACCTG
C3 CTACGAACTTTTTTGCCCAGCGATTGCCTCAGTTGAAACATCTGAACTTG
C4 CTACGAGCTTTTTTGCCCAGCGATTGCCTCTGTTGAAACATCTTAACTTG
C5 ACACCAACTTCTTTGTCCAGCGATTGCCTGAACTTAAGAACCTCAACTTG
. ** *.*** **** ****.******** :. * **..* ** ** **
C1 GCTCACAATGAATTGCTAAATATTTCCCGGGAATCATTCTATAATTTATT
C2 GCTCACAATGAATTGCTAAACATTTCCCGGGAATCATTCTACAATTTGTT
C3 GCTCACAATGAGTTGGTAAACATTTCGCGGGAATCCTTCTACAATTTGTT
C4 GCTCACAATGAGTTGGTAAACATTTCGCGGGAATCCTTCTACAATTTGTT
C5 GCTTACAATCAATTGTTAAACATTTCAAGGGAATCATTCTACAATTTGTT
*** ***** *.*** **** ***** .*******.***** *****.**
C1 GGAACTACAAACGTTAGTTCTCAGTCACAACAACATCTCGGATATTGACT
C2 GGAACTACAAACGTTAGTTCTCAGTCACAACAACATCTCGGATATTGACT
C3 GGAACTACAAACGTTAATTCTCAGTCACAACAACATCTCGGATATAGACT
C4 GGAACTACAAACGTTAGTTCTCAGTCACAACAAAATCTCGGATATAGACT
C5 GGAACTACAAACATTAATACTCAGTCACAACAACATCACGGATATAGACT
************.***.*:**************.***:*******:****
C1 ATGAAACATTTTTGGCACTACCGAATCTGCAATATCTGGATTTATCCCAT
C2 ACGAAACATTTTTGGCACTACCGAATCTGCAATATCTGGATTTATCCCAT
C3 ACGAAACATTTTTGGCACTACCGAATCTGCAATATCTGGATTTATCCCAT
C4 ATGAAACATTTTTGGCGCTACCGAATCTGCAATATCTGGATTTATCCCAT
C5 ACGAAACCTTTTTGGCTCTGCCGAATCTGCAACATCTGGACTTATCCCAC
* *****.******** **.************ ******* ********
C1 AACCGCTTGAGTGGATCCGCTATTCGTGCTCTGCAAGGAATTCCGGATTT
C2 AACCGCTTGAGTGGATCCGCAATTCGTGCTCTGCAGGGAATTCCGGATTT
C3 AACCGCTTGAGCGGATCCGCTATCAGAGCTCTGCAGGGAATTCCGGATTT
C4 AACCGCTTGAGTGGTTCCGCCATCCGAGCTCTGCAGGGAATTCCGGATTT
C5 AACCGCTTGAGTGGCTCTGCAATACGAGCTTTGCAGGGAATTCCGGATTT
*********** ** ** ** ** .*:*** ****.**************
C1 GGTCAGCCTTTCCATCGCTTACAATCCAGATGTGGGAGTGGCGATGCAGG
C2 GGTCAGCCTTTCCATCGCTTACAATCCAGATGTGGGAGTGGCGATGCAGG
C3 GGTCAGCCTTTCAATCGCTTACAATCCAGAAGTGGGAGTGGCGATGCAGG
C4 GGTCAGCCTTTCTATCGCTTACAATCCTGATGTGGGAGTTGCGATGCAGG
C5 GGTCAGCCTTTCCATTGCCTACAATCCGGAAGTGGGAGTGGCCATGCAGG
************ ** ** ******** **:******** ** *******
C1 AGTTCGTTGCTTCCTGGAGCCTAAAGGAGTTGGATGCCAGTGGCACTGGA
C2 AGTTCGTCGCTTCCTGGAGCCTCAAAGAGTTGGATGCCAGTGGCACTGGA
C3 AGTTCGTCGCATCCTGGAGCCTCAAGGAGTTGGATGCCAGTGGCACTGGA
C4 AGTTCGTCGCGTCCTGGAGCCTCAAGGAGTTGGATGCCAGTGGTACTGGA
C5 AGTTCGTCGCCTCCTGGAGTCTCAAGGAGTTGGATGCTAGTGGCACTGGA
******* ** ******** **.**.*********** ***** ******
C1 TTGTGTCAGGTGCCTGCAGCTCTAGCCCAATCCGTGAGGACTCTCAAGTT
C2 TTGTGCCAGGTGCCTGCAGCTCTAGCCCAATCTGTGAGGACTCTCAAGTT
C3 TTGTGCCAGGTGCCTGCAGCTCTAGCCCAATCCGTGAGGACTCTCAAGTT
C4 TTGTGCCAGGTGCCTGCAGCTTTAGCCCAATCCGTGAGGACTCTCAGGTT
C5 TTGTGCCAGGTGCCAGCAGCTTTAGCCCAATCTGTGAGGACTCTTAAGTT
***** ********:****** ********** *********** *.***
C1 GTCCGACAACTGGCTCAAGGCAATTAATTGCGGTGACATGGACAGCTATC
C2 GTCCGACAACTGGCTCAAGGCAATTAATTGCGGTGACATGGACAGCTATC
C3 GTCCGACAATTGGCTCAAGGCAATTAATTGCGGCGACATGGACAGCTACC
C4 GGCCGACAACTGGCTTAAGGCAATTAATTGCGGTGACATGGACAGTTATC
C5 ATCCGACAACTGGTTAAAGGCCATCAACTGCGGCGACATGGACAGCTATC
. ******* *** * *****.** ** ***** *********** ** *
C1 CGCTGCTGCAGTATCTTGATCTCTCGCACTCCCGCATTGCCCAAGTGGAG
C2 CGCTCCTGCAGTACCTTGATCTCTCGCACTCCCGCATTGCCCAAGTGGAG
C3 CACTGCTGCAGTACCTTGATCTCTCGCATTCCCGCATTGCCCAAGTGGAG
C4 CACTGCTGCAGTACCTCGATCTCTCGCATTCCCGCATTGCCCAAGTGGAG
C5 CCCTGCTGCAGTACCTTGATCTCTCTCACTCCCGGATTGCCCAAGTGGAA
* ** ******** ** ******** ** ***** **************.
C1 GACGATGCCTTGGGACGATTGGAGCTCCTCGAATCCCTTTTCCTAGACCG
C2 GACGATGCTCTGGGACGATTGGAGCTCCTCGAATCACTTTTCCTCGACCA
C3 GACGATGCCCTGGGACGACTGGAGCTCCTCGAGTCCCTTTTCCTCGACCA
C4 GACGATGCTCTGGGACGACTGGAGCTCCTCGAATCCCTTTTCCTGGACCA
C5 GACGATGCCCTGGGACGTTTGGAGCTCCTTGAATCTCTTTTCTTGGACCA
******** *******: ********** **.** ****** * ****.
C1 TAATCTACTGATGCGAGTGCCAAGTAGTCTGCCGCCATCGCTGGAACACT
C2 CAATCTTCTGATGCGAGTGCCCAGCAGTCTGCCACCATCGCTGGAACACT
C3 CAATCTTCTAATGCGAGTGCCCAGCAGCCTGCCGCCATCGCTGGAACACC
C4 CAATCTTCTGATGCGAGTGCCCAGTAGCCTGCCGCCATCGCTGGAACACT
C5 CAATCTTCTAATGCGAGTGCCAAACAGTCTACCACCATCACTGGAACACC
*****:**.***********.*. ** **.**.*****.*********
C1 TATTTCTGCAGCACAATCAGATAATGGAGCTTCCGCCACAGGCTTTTGTG
C2 TATTTCTGCAGCACAATCAGATAATGGAACTTCCGCCACAGGCTTTTGTG
C3 TATTTCTGCAGCACAATCAGATAATGGAGCTTCCGCCTCAGGCTTTTGTG
C4 TATTTCTGCAGCACAATCAGATAATGGAGCTCCCGGCGCAGGCTTTTGTG
C5 TATTCCTACAGCACAACCAGATAATGGAACTGCCACCTCAGACTTTCGTT
**** **.******** ***********.** **. * ***.**** **
C1 GGATTGGTCAATCTACAGACTCTGGACTTATCCAACAATCGATTGATCTT
C2 GGATTGGTCAATCTACAGACTCTGGACTTATCTAACAATCGATTGATCTT
C3 GGATTGGTCAATCTGCAGACTCTGGACTTATCCAGCAATCGATTGATCTT
C4 GGATTGGTCAATCTGCAGACTCTGGACTTATCCAACAACCGATTGATTTT
C5 GGCCTGGTCAACCTGCAGACCCTGGACTTGTCCCACAATCGTTTGATCTT
**. ******* **.***** ********.** ..*** **:***** **
C1 CCTGCCCCCGCTATCGCTCCCCAAATTGCTCACCCTGAATCTGGAATCGT
C2 CCTGCCCCCGCTATCACTGCCCAAATTGCTCACCCTGAATCTGCAATCGT
C3 CCTGCCCCCGCTTTCGCTGCCCAAATTGCTCACCCTGAATCTGCAATCGT
C4 CCTGCCCCCACTTTCGCTGCCCAAATTGCTAACCCTGAATCTGCAATCGT
C5 TCTGCCCGCTCTTGCACTGCCCAAATTGCTTACCCTAAATCTGCAATCTT
****** * **: *.** *********** *****.****** **** *
C1 CAGGGGTGGAGAGCGTTAGCCAATCGATAGTGCACACACTGCCACAGTTA
C2 CAGGGGTGGAGAGTGTTAGTCAATCGATAGTGCACACACTGCCACAGTTA
C3 CAGGGGTGGAGAGCGTTAGCCAATCGATAGTGCACACACTGCCACAGTTA
C4 CAGGAGTGGAGAGCGTTAGCCAATCGATAGTGCACACACTGCCACAGTTA
C5 CAGGTGTAGAGAGTGTCAGCCAATCGATAGTGCACACATTGCCCCAGTTG
**** **.***** ** ** ****************** ****.*****.
C1 AGGGATCTTCTACTGGAGGACAACCCCATTAAGTGCAGCGATTTGCTGGG
C2 AGGGATCTTCTACTGGAGGACAACCCCATTAAGTGCAGCGATTTGCTGAG
C3 AGGGATCTTTTACTAGAGGACAACCCCATTAAGTGCAGCGATTTGCTGGG
C4 AGGGATCTTTTGCTAGAGGACAACCCTATCAAGTGCAGCGATTTGCTGGG
C5 AGGGATCTCTTACTGGAGGACAATCCCATAAAATGCAGCGATTTGCTGGG
******** *.**.******** ** ** **.***************.*
C1 CATTGCCGAATGGGCCAGTCCTTGCAGGTCAGTGGATGCGGGTCAATCGA
C2 CATTGCCGAATGGGCCAGTCCTTGCAGGTCAGTGGATGTGGGTCAATCGA
C3 CATTGCCGAATGGGCCAGTCCTTGCAGGTCAGTGGATGTGGGTCAATCGA
C4 CATTGCCGAATGGGCCAGTCCATGCAGGTCAGTGGATGTGGGTCAATCGA
C5 CATTGCCGAGTGGGCCAGCCCTTGCAGGTCAGTGGATGTGGGTCAGTCGA
*********.******** **:**************** ******.****
C1 ATGGGGCAAGTGTAAGTGGGCGCGTGGATTTGAAGACGGAGTATCTGCAA
C2 ATGGGGCAAGTGTGAGTGGGCGCGTGGATCTAAAAACGGAGTATCTGCAG
C3 GTGGGGCAAGTGTGAGTGGGCGGGTGGACTTGAAGACGGAGTATCTGCAG
C4 ATGGGCCAAGCGTGAGTGGGCGGGTGGATTTGAAGACGGAGTATCTGCAG
C5 ATGGGAGAAGTCCAAGTGGGTGGGTGGACCTCAAGACGGAGTATCTGCAA
.**** *** .****** * ***** * **.**************.
C1 TTCCACAATTTTTACGAAAACTTCAGCAGCCGAGAGTGTGGTATAAGAAA
C2 TTCCACAATTTCTACGAAAACTTCAGCAGCCGTGAGTGTGGTATAAGAAA
C3 TTCCACAATTTTTACGTAAACTTCAGTAGCCGAGGGTGTGTCATAAGAAA
C4 TTCCACAATTTTAACGAAAACTTCAGTAGCCGAGAGTGTGGTATAAGAAA
C5 TTTCACAATTTTTACGACAACTTCAGTAGCCGAGAGTGTGGAGCCAGGAA
** ******** :***:.******** *****:*.***** . .**.**
C1 ACCGGAAAATGACACAAAGCCGCCTTCTTGCAGCCTAACAAGGGCATCAG
C2 ACCGGAAAATGACACAAAGCCGCCTTCTTGCAGCCTGACAAGGGCAGCAG
C3 ACCGGAAAATGACACAAAGCTGCCTTCTTGCAGCCTGACAAGGGCAGCAG
C4 ACCGGAAAATTACACAATGCCGCCTTCTTGCAGCGTGATAAGGGCAGCAG
C5 ACCGGAAAATGACACAAAGCCGCCTTCTTGCAGCCTCACAAGTGCCACAG
********** ******:** ************* * * *** **. ***
C1 CTACATTAACAACAACACCCAGAAGTATGTCAAAAGTTGAAAAGTCACAA
C2 CAACATTAACAACAACACCCAGAAGTATGTCAAAAGTTAAAAAGTCACAA
C3 CAGCATCAACAACAACACCCGGAAGTATGTCAAAAGTTAAAAAGTCAAAA
C4 CAACATCAACAACAACACCCAGAAGTATGTCAAAAGTTAAAAAGTCAAAA
C5 CAGCATTAACAACAACGTCGAGAACTATGTCAAAAGTTAAAAAGTCAAAA
*:.*** *********. * .*** *************.********.**
C1 GAAGCACAAGCAACAGCAACATCAGTGGAAGTAGCAGCGGCAACAGCAGC
C2 GAAGCACAACCAACAGCAACATCAGTGGAAGTAGCAGCGGCCGCAGCAGC
C3 GAAACACAAGCACCAGCAACATCAGTGGAAGTAGCGGAGGCAACAGCAGC
C4 GAAGCACAGGCAACAGCAACATCAGTGGAAGTAGCGGCGGCAACAGCAGC
C5 GGAGCAGACACGACAGCAGCAGCAGCAGCAGTGGCAACATCAGAAAAACA
*.*.** * *..*****.** *** .*.***.**.... *...*..* .
C1 AACATCAGAAAAAACAGGC---ATACAAGCAACA----------------
C2 AACATCAGAAAAAACAGAC---ATACACGCAACACCAGCAGCAGCA----
C3 AATATCAGAAAAAACAGAC---ACCCAAGCAACATCAGCTGCAGCAGCAG
C4 AACATCAGAAAAAACAGAC---ATACAAGGAACATCAGCTGCA-------
C5 CACAGCACATACAACAGACGACACACAGGCAACGTCAGCATCA-------
.* * ** *:*.*****.* * .** * ***.
C1 --TCAGCAGCACAGTCGACTGCGGCGGCAACAACAGCAGAAAGAGAAGCA
C2 --CCATCAGCACAGTCGACTGCGGCGGCAACAACAGCAGAAAGAGAAGCG
C3 ATACAGCAGAGCAGTCGACTGCAGCAGCAACAACAGCGGAAAAAGAAGCA
C4 -----------CAGTCCACTGCAGCAGCCACAACAGCGGAAAAAGAAACA
C5 --------ACTCAGCCAACTACAGGAGCAACATCAGCGGAAAAAGCAGCA
*** * ***.*.* .**.***:****.****.**.*.*.
C1 ATTGCAACAGCAACATCAAGCGACACCACAGCAACACCAACACTCGCAGC
C2 ATTGCAACAGCAACATCAAGCGACACCACAGCAACACCAACACTCGCAGC
C3 ATCCCAACAGCAACATCAAGCGACACCACAGCAACACCAGCACTCGCAGC
C4 ATCCCAACAGCAACATCGAGCGACACCACAGCAACACCAACACTCGCAGC
C5 ATTCCAACAGCAACACCAACTTCACCAACAGCA-----------------
** *********** *.* ...*.******
C1 AGCAGCAGCA---------------ATACAATCAGCTGGCAACATCCCTG
C2 AGCAGCAGCA---------------ATGCAATCAGCTGGCAACATCCCTG
C3 AGCAGCAGCAGCAGCAGCAGCAGCAATGCAATCAGCTGGCAACAGCCTTG
C4 AGCAACA------------------ATGCAATCAGCTGGCAACAGCCTCG
C5 -------------------------ATGCAATCAGCTGGCAACAGCGTTG
**.**************** * *
C1 CCCAGTTAACCACAAAAACGTTGCGGCCCACAGAAACAACTTCGTTAGCG
C2 CCCAGTTAACCACAAAAACGTTGCGGCCAACAGAAACAACTTCGTTAGCG
C3 CCCAGTTAACCACAAAAACGTTGCGGCCAACAGAAACAACTTCGTTAGCG
C4 CCCAGTTAACCACAAAAACGTTGCGGCCAACAGAAACAACTTCGTTAGCG
C5 CCCAGTTAACCACAAAAACTTTGCGGCCAACAGAAACAACTTCGTTAGAG
******************* ********.*******************.*
C1 CAACTGCAGCGTCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGA
C2 CAACTGCAGCGTCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGA
C3 CAACTGCAGCGTCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGA
C4 CAACTGCAGCGTCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGA
C5 CAACTGCAGCAGCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGC
**********. *************************************.
C1 AACGCCAGCAAAGAACCTGCCAAGTTTGGCCCAGACAAAGGCAACAACAG
C2 AACGCCAGCAAAGAACCTGCCAAGTTTGGCCCAGACAAAGGCAACAACAG
C3 AACGCCAGCAAAGAACCTGCCAAGTTTAGCCCAGACAATGGCAACAACAG
C4 AACGCCAGCAAAGAACCTGCCAAGTTTGGCCCAGACAAAGGCAACAACAG
C5 CACGCCAGCAAAGAACCTGCCAAGTTTGGCCCAGACAAAGGCAACAACAG
.**************************.**********:***********
C1 CGCTTCCCATTTTGGCAACACGAGATGCTGCCACA---------------
C2 CGCTTCCCATTTTGGCAACACGAGATGCTGCTACA---------------
C3 CGCTTCCCATTTTGGCAACACGAGATGCCGACACG---------------
C4 CGCTTCCCATTTTGGCAACACGAGATGCCGGCACA---------------
C5 CGGTTCCCATTTTGGCAGCCCCAGCAGCAGCAACAACACCAGCAGCTGCA
** **************.*.* **.:** * **.
C1 ---------------------GCAACAACGGAAATAAATTCCGACAAGCC
C2 ---------------------GCAACAACGGAAATAAATTCCGACAAGCC
C3 ---------------------GCAACAACAGAAATAAATTCCGACAAGCC
C4 ---------------------GCAACAACAGAAATAAATTCCGACAACCC
C5 GCAACAACAACAACAACAACAGCAGCAACAGCAATAAATTCCAACAAGCC
***.****.*.**********.**** **
C1 AACGAACATTAGCGGTGCCACAAAAACAGTAGCAACATCAGCTGCAGAAA
C2 AACGAACATTAGCGGTGCCACAAAAACAGTAGCAACATCAGCTGCAGAAA
C3 AACGAACATTAGCGGTGCCACAAAAACAGCAGCAACATCAGCTGCTGAAA
C4 AACGAGCATTAGCGGTGCCACAAAAACAGCAGCAGCATCAGCCGCTGAAA
C5 AACGAACATTAGCGGTGCCACAAAAACAGCAACA---------GAAATGG
*****.*********************** *.** *.:.:..
C1 TAGCAACACCACCAGCAATTGAAGTGCCACAAACCATTTTGGCCGGCAAA
C2 TAGCAACACCACCAGCAATTGAAGTGCCACAAACCATTTTGGCCGGCAAA
C3 TACCAACAACACCAGCAATTGAAGTGCCACAAACCATTTTGGCCGGCAAA
C4 TAGCAACAACACCAGCAATTGAAGTGCCGCAAACCATTTTGGCCGGCAAA
C5 TGGCAGCACCACCAGCAATTGAAGTGCCACAAACAATTTTGGCCGGAAAA
*. **.**.*******************.*****.***********.***
C1 AAATCTGACAAAATGCCAGCCGATAAGGCACACGAGACTTTATTAAAATA
C2 AAATCTGACAAAATGCCAGCCGATAAGGCACACGAGACTTTATTAAAATA
C3 AAATCTGACAAAATGCCAGCCGATAAGGCACAGGAGACTTTATTAAAATA
C4 AAATCTGACAAAATGCCAGCCGATAAGGCACAGGAGACTTTATTAAAATA
C5 AAATCTGACAAAATGCCAACCGATAAGGCACACGAGACTTTATTAAAATA
******************.************* *****************
C1 CCCAACAAGGGACACATCCGGTCAAGTTGCAACAACGCCA----------
C2 CCCAACAAGGGACACATCCGGTCAAGTTGCAACAACGCCA----------
C3 CCCAACAAGGGACACATCCGGTCAAGTTGCAACACCGCCA----------
C4 CCCAACAAGGGACACGTCTGGTCAAATTGCAACACCACCA----------
C5 CCCAACAAGGGACACATCCGGTCAAGCAGCAGCATCAGCAGCAGCAGCCG
***************.** ******. :***.** *. **
C1 -----------CACAAACATGCAACACTGCAGCTGCACGTTAAGGATCGA
C2 -----------CACAAACATGCAACACTGCAGCTGCACGTTAAGGATCGA
C3 -----------CACAAACATGCAACACTGCAGCTGCACGTTAAGGATCGA
C4 -----------CACAAACATGCAACACTGCAGCTGCACGTTAAGGATCGA
C5 CAACACTGTCACACAAACATGCAACATTGCAGCTGCACGTTAAGGATCGA
*************** ***********************
C1 CATCTAATTGGCACACCGCTGCTGATGCACAAGGGCGATGTCCTATTGGT
C2 CATCTAATTGGCACACCGCTGCTGATGCACAAGGGCGATGTCCTTTTGGT
C3 CATCTAATTGGCACACCGCTGCTGATGCACAAGGGCGATGTCCTCCTGGT
C4 CATCTAATTGGCACACCGCTGCTGATGCACAAGGGCGATGTCCTTTTGGT
C5 CATCTAATTGGCACACCGCTTCTGATGCACAAGGGCGATGTCCTTTTGGT
******************** *********************** ****
C1 GGATGCCGAGCAGTTGTTGCTGCCTGGTACGGCCACCGTGGCGGATGCGG
C2 GGATGCCGAACAGCTGCTGCTGCCTGGTACGGCCACCGTGGCAGATGCGG
C3 GGACGCCGAGCAGTTGTTGCTCCCTGGTACGGCCACCGTGGCGGATGCGG
C4 GGATGCCGAGCAGTTGTTGCTCCCTGGTACGGCCACCGTGGCGGATGCGG
C5 GGATGCCGAGCAGTTGTTGCTGCCTGGAACGGCAACCGTGGCGGATGCGG
*** *****.*** ** **** *****:*****.********.*******
C1 ATTCG------GAAGTTCTGGACCCGAGCCAACAA---CATCAGTCAGCG
C2 ATTCG------GAAGTCCTGGACCCGAGCCAACAA---CATCAGTCAGCG
C3 ATGCGGATTCGGAAGTTCTGGACTCGAGCCAACAA---CATCAGTCAGCG
C4 ATTCG------GAAGTTCTGGACTCCAGCCAACAA---CATCAGTCAGCG
C5 ATTCG------GAAGTCTTGGACTCGAGCCAACAACAACATCAGTCGGCG
** ** ***** ***** * ********* ********.***
C1 GAGCAGGAAAAGCACCAGTCAGCGACTGATAAGCGGCAAGCGGATGCAAT
C2 GAGCAGGAAAAGCACCAGTCAGCGACTGATAAGCGACAAGCGGATGCAAT
C3 GAGCAGGAAAAGCACCAGCCAGCGACTGATAAGCGACAAGCGGATGCAAT
C4 GAGCAGGAAAAGCACCAGTCAGCGACTGATAAGCGACAAGCGGATGCAAT
C5 GAGCAGGAAAAGCACCAGTCAGCGGCTGATAAGCGACAAGCGGAAGCCAT
****************** *****.**********.********:**.**
C1 AAACGGCGACACG------------AAGTCGCCGGCGAAAGGCCACAAAA
C2 AAACGGCGACACA------------AAGTCGCCGGCGAAAAGCCACAAAA
C3 AAACGGCGACACA------------AAGTCGCCG---AAAAGCCACAAGA
C4 AAACGGCGACACA------------AAGGCGCCGGCGAAAAGCCACAAAA
C5 AAATGGCGACTCAAAGTCGTCGTCGTCGTCGCCACCAAAAAGTCACAAAA
*** ******:*. :.* ****. ***.* *****.*
C1 AGAAACCATCGCTGAGCATCAAGAAGATGACCTACAGTACCAAACACGCG
C2 AGAAACCATCGCTGAGCATCAAGAAGATGACCTACAGTACCAAACACGCG
C3 AGAAACCATCGCTGAGCATTAAGAAGATGACCTACACTACCAAACATGTG
C4 AGAAACCATCGCTGAGCATCAAAAAGATGACCTACAGTACCAAGCATGCG
C5 AGAAGCCATCGCTGAGTATCAAGAAGATGACCTACAGTACCAAACATGCA
****.*********** ** **.************* ******.** * .
C1 GCAAAAACCGTGGAGGATATGGCAGCCACCTCGAAGACACCGCAACACCA
C2 GCGAAAACAGTGGAGGATATGGCAGCCACCTCGAAGACACCGCAACACCA
C3 GCAAAAGCCGCGGAGGACATGGCAGCCACCGCGAAGACATCGCAACATCA
C4 GCAAAAACCGTGGAGGACATGGCAGCTACCTCGAAGACACCGCAGCACCA
C5 GTAAAAGCCGTTGAGGAACTACAAGCCACCTCCAAAACACCCCAGCACCA
* .***.*.* ***** .*. .*** *** * **.*** * **.** **
C1 ACATAGCAGTGTGAACACACCCAAAGAGGCTGCTCCCGAGGAGTTGAGCA
C2 ACATAGCAGTGTGAACACACCCAAAGAGGCTGCTCCCGAGGAGCTGAGCA
C3 ACATAGCAGTGTGAACACACCCAAGGAGTCTACTCCCGAGGAGCTGAGCA
C4 ACATAGCAGTGTGAACACACCCAAGGAGGCTATTCCCGAGGAGCTGAGCA
C5 ACACAGCAGTGTCAACACACCCAAAGAGGCTTCGCCGGAGGAACTCAGTA
*** ******** ***********.*** ** ** *****. * ** *
C1 CCTTTGCGCAGCTTAAAGCCTATGTGGAGCTAAAGAGCGAATCGAAACCG
C2 CCTTTGCGCAGCTCAAAGCCTATGTGGAGCTAAAGAGCGAATCGAAACCG
C3 CCTTTGCCCAGCTAAAAGCCTTCGTAGAGCTAAAGAGCGAATCGAAACCG
C4 CCTTTGCCCAGCTAAAAGCATATGTAGAGCTAAAGAGCGAATCGAAACCG
C5 CTTTCGCCCAGCTAAAGGCCTATGTGGAACTAAAAAGCGAATCGAAACCA
* ** ** ***** **.**.*: **.**.*****.**************.
C1 GAACACCTAATGGACCAGCGGGAGGAAAACCATCATAATCTTACAGGAAA
C2 GAACACCTAATGGACCAGCGGGAGGAAAACCATCATAATCTTACAGGAAA
C3 GAACACCTAATGGACCAGCGAGAGGAAAACCATCACAATCTCACAGGAAA
C4 GAACACCTAATGGATCAGCGGGAGGGAACCCATCACAATCTTACAGGAAA
C5 GAACATTTAATGGACCAGCGAGAGGAAAACCTTCACAATCTTACAGGAAA
***** ******* *****.****.**.**:*** ***** ********
C1 TCATCCAGGAGTCATGCTCCTGGTGGCCTGCGTTTTGTTCATCGTCCTGC
C2 TCATCCCGGAGTCATGCTCCTTGTGGCCTGCGTTTTGTTCATCGTCCTGC
C3 TCATCCCGGGGTTATGCTTCTGGTAGCCTGCGTTTTGTTCATCGTGCTGC
C4 TCATCCCGGTGTTATGCTCCTGGTGTCCTGCGTTTTGTTTATCGTGCTGC
C5 TCATCCTGGAGTAATGTTGCTGGTAGCCTGCGTATTATTCATCGTATTGC
****** ** ** *** * ** **. *******:**.** ***** ***
C1 TCGCCGGTTTGGCCCACGTCTATCGCTGTGAATTGCCTTGGCAAAGGAGC
C2 TCGCCGGTTTGGCCCACGTCTATCGCTGTGAATTGCCTTGGCAAAGGAGC
C3 TAGCCGGTCTGGCCCACGTCTATCGCTGTGAATTGCCCTGGCAGAGGAGC
C4 TTGCCGGTCTGGCCCACGTCTACCGCTGTGAATTGCCTTGGCAGAGGAGC
C5 TAGCAGGATTGGCTCATGTCTATCGCTGTGAATTGCCCTGGCAGAGAAGC
* **.**: **** ** ***** ************** *****.**.***
C1 AACCGCTCTGGTCAATTGCGACCGCATCATCAAAGACACCTAAACGAAAC
C2 AACCGCTCTGGTCAATTGCGACCGCATCATCAAAGGCATCTAAACGAAAC
C3 AGCCGCTCCGGACAATCGCGACCGCATCATCAAAGGCATCTGAACGAAAC
C4 AGCCGTTCTGGACAATCACGACCGCATCATCAAAGGCATCTAAACGAAAC
C5 AATCGACCTGGACAGATGCGCCCGCATCATCAAAGGCATCTAAACGACAC
*. ** * **:**.: .**.**************.** **.*****.**
C1 CGATGATGCGCACAGCTTCCTGCACTATCAGGGATCTGTGAACTCCAATG
C2 CGATGATGCGCATAGCTTCCTGCACTATCAGGGATCTGTGAACTCCAATG
C3 GGATGATGCGCACAGCTTCCTGCACTATCAGGGATCTGTGAACTCCAATG
C4 GGATGACGCGCACAGCTTCCTGCACTATCAGGGATCTGTGAATTCCAATG
C5 CGATGATGCCCATAGTTTTCTGCACTATCAGGGCTCTGTGAATTCCAATG
***** ** ** ** ** **************.******** *******
C1 GCGGTGATCCGGCTCGCCTGCAAAAGTGGCACCACAGCACGCGGAGAGAA
C2 GCGGAGATCCGGCTCGCCTGCAAAAGTGGCACCACAGCACGCGGAGAGAA
C3 GGGGAGATCCGGCTCGCCTGCAAAAGTGGCACCACAGCACGCGGCGAGAA
C4 GGGGAGATCCGGCTCGCCTGCAAAAGTGGCACCACTGCACCCGGAGAGAA
C5 GAGGAGATCCCGCCCGTTTACAAAAGTGGCATCATAGCACTCGGAGAGAA
* **:***** ** ** *.*********** ** :**** ***.*****
C1 GCACCCTACAGCTCCCCGCTGCACAATCTACAAGCGCGGGAACTGCAACA
C2 GCACCCTACAGCTCCCCGCTCCACAATCTGCAAGCGCGGGAACTGCAACA
C3 GCTCCCTACAGCTCCCCGCTGCACAATCTACAAGCGCGCGAACTGCAACA
C4 GCTCCCTACAGCTCCCCGCTGCACAATCTACAAGCGCGCGAACTGCAACA
C5 GCTCCTTATAGTTCTCCACTTCACAATCTGCAAGCTCGCGAGTTGCAACA
**:** ** ** ** **.** ********.***** ** **. *******
C1 GCAACGCTGCCAGCAATTCTATAGCTCCTCGCTGGCGGACAAGAGCTCCT
C2 GCAACGCTGCCAGCAATTCTATAGCTCCTCGCTAGCGGACAAGAGCTCCT
C3 GCAGCGCTGCCAGCAATTCTACAGCTCCTCGCTGGCGGACAAGAGCTCCT
C4 GCAACGCTGCCAGCAATTCTACAGCTCCTCTCTGGCGGACAGAAGCTCCT
C5 GCAACGTTGCCAGCAATTCTATAGCTCATCTCTGGCGGACAAGAGCTCCT
***.** ************** *****.** **.*******..*******
C1 CCACCTCGTCTTCCTCG------TCGGGAAGCAGTCGCAGTAGCCTGCAC
C2 CCACCTCGTCATCCTCA------TCGGGAAGCAGTCGCAGTAGCCTGCAC
C3 CCACCTCGTCATCCTCG------TCGGGAAGCAGTCGCAGCAGCCTGCAC
C4 CCACCTCGTCTTCCTCG------CCGGGAAGCAGTCGCAGTAGCCTGCAC
C5 CCACTGCCTCCTCGTCTTCCTTATCGGGAAGCAGCCGCAGTAGCCTGCAT
**** * ** ** ** ********** ***** ********
C1 TCGCCCAGCAGAGATGACAGCTACTATATAGAGATGGCGCCCAGTAGTCC
C2 TCGCCCAGCAGAGATGACAGCTACTATATAGAGATGGCCCCCAGTAGTCC
C3 TCGCCCAGCAGAGACGACAGCTACTACATAGAGATGGCGCCCAGTAGTCC
C4 TCGAACAGCAGGGATGACAGCTACTATATAGAGATGGCACCCAGTAGTCC
C5 TCTCCCAGTAGAGATGATAGCTACTACATAGAGATGGCTCCCAGTAATCC
** ..*** **.** ** ******** *********** *******.***
C1 ACCAGCAGCCAACCTGCCCAGTTTGCCCATGGAACTTTTGGGCAGCCGGA
C2 AGCAGCAGCCAACCTGCCAAGTTTGCCCATGGAACTCTTGGGCAGCAGGA
C3 ACCAGCAGCCCACCTGCCCAGTTTGCCCATGGAACTCTTGGGCAGCAGGA
C4 ACCAGCAGCCAACCTGCCTAGTTTGCCCATGGAACTCTTGGGCAGCAGGA
C5 ACCATCCGCCACCCTGCCTAGTTTACCCATGGAACTGTTGGGCAGCAGGA
* ** *.***..****** *****.*********** *********.***
C1 GTAATGCCCTCGGATGCCGGACGGATCGAGTGGCAGCCACCGATCTGGGC
C2 GTAATGCCTACGGTTGCCGGACGGATCGAGTGGCAGCCACCGATCTGGGC
C3 GCAATGTCCTCGGTTGCCGGGTGGACCGAGTGGCTGCCACCGATCTGGGC
C4 GCAACGCCCTTGGCTGCCGGGCGGACCGAGTGGCAGCCACCGATCTGGGC
C5 GTAATGGCCTAGGAAGCCGAACAGATCGAGTGGCTGCCACCGATCTGGGC
* ** * * : ** :****.. .** ********:***************
C1 GGTACGACAGAGGCGGTACCCTCTTCGGCGGCGGCCATCAAGTCGGTGAG
C2 GGTACGACAGAGGCGGTACCCTCTTCGGCGGCGGCCATCAAGTCGGTGAG
C3 GGTACGACAGAGGCGGTACCTTCCTCGGCGGCGACCATCAAGTCGGTCAG
C4 GGTACGACAGAGGCGGTACCTTCGTCGGCGGCGACCATCAAATCCGTGAG
C5 GGAACGACAGCAGCGGTACCTTCTTCAGCGACAGCCATCAAGTCTGTTAG
**:*******..******** ** **.***.*..*******.** ** **
C1 CAGCAGACTGATGACGCCCAGTTCGCGGAGGCTGAACATCTGG-------
C2 CAGCAGACTGATGACGCCCAGTTCGCGGAGGCTGAACATCTGG-------
C3 CAGCAGACTGATGACGCCCAGTTCGCGGAGGCTGAACATCTGG-------
C4 CAGCAGACTGATGACGCCCAGTTCGCGCAGGCTGAACATCTGG-------
C5 CAGCAGACTAATGGCTCCAAGTTCAAGGAGGTTGGGAATCTGG-------
*********.***.* **.*****..* *** **...******
C1 --------------------------------------------
C2 --------------------------------------------
C3 --------------------------------------------
C4 --------------------------------------------
C5 --------------------------------------------
>C1
ATGGTGAAAATCGTGAACCAACACTGTGATCTAGGCCTGGCCCTTCTCCT
GGCCTGGACGTGGCTAACAAGGCTGGTGGTGGCGGCCCATCTGGTCGACA
TCCCCACCTCATCACGCCTGGCCGCTGAACGGGAGGAGCAGCAGTTGTCC
CGGCAGGACGTAGGACGGCTCAGCTACCAGAGTATCCATCGTATGCTGAG
GGACGAAAACGAACCGGATAGCTTTCGGGGGGAATTGCGATACCAACAGA
AACGCCACAAAAGGGAGCTGGAGCTGAATGCGCCGGCCAACAAGCTTAAT
CTCACCCACCGCGATTTGAGGACATTCAATAGCACTGGTGGTCAGTGGAA
GGGCGACTTTCAAGTGATCACCGCCATGGATCTGAGCAGCAATCAACTGG
AGAGCCTCAGCTTGGACAACTTCAATCAACTGAGGCAGCTGGACTTGGGA
AATAACTCCCTGGAGGTAATACCCTTGAGTTTGGCAGACACCAATATGTC
ACTACCCTTTGTGACGCTCGATCTTTCCTGCAACAAATTCAGCCAAATTT
CTACGAGCTTTTTTGCCCAGCGATTGCCTCAGTTGAAAAATCTGAATCTG
GCTCACAATGAATTGCTAAATATTTCCCGGGAATCATTCTATAATTTATT
GGAACTACAAACGTTAGTTCTCAGTCACAACAACATCTCGGATATTGACT
ATGAAACATTTTTGGCACTACCGAATCTGCAATATCTGGATTTATCCCAT
AACCGCTTGAGTGGATCCGCTATTCGTGCTCTGCAAGGAATTCCGGATTT
GGTCAGCCTTTCCATCGCTTACAATCCAGATGTGGGAGTGGCGATGCAGG
AGTTCGTTGCTTCCTGGAGCCTAAAGGAGTTGGATGCCAGTGGCACTGGA
TTGTGTCAGGTGCCTGCAGCTCTAGCCCAATCCGTGAGGACTCTCAAGTT
GTCCGACAACTGGCTCAAGGCAATTAATTGCGGTGACATGGACAGCTATC
CGCTGCTGCAGTATCTTGATCTCTCGCACTCCCGCATTGCCCAAGTGGAG
GACGATGCCTTGGGACGATTGGAGCTCCTCGAATCCCTTTTCCTAGACCG
TAATCTACTGATGCGAGTGCCAAGTAGTCTGCCGCCATCGCTGGAACACT
TATTTCTGCAGCACAATCAGATAATGGAGCTTCCGCCACAGGCTTTTGTG
GGATTGGTCAATCTACAGACTCTGGACTTATCCAACAATCGATTGATCTT
CCTGCCCCCGCTATCGCTCCCCAAATTGCTCACCCTGAATCTGGAATCGT
CAGGGGTGGAGAGCGTTAGCCAATCGATAGTGCACACACTGCCACAGTTA
AGGGATCTTCTACTGGAGGACAACCCCATTAAGTGCAGCGATTTGCTGGG
CATTGCCGAATGGGCCAGTCCTTGCAGGTCAGTGGATGCGGGTCAATCGA
ATGGGGCAAGTGTAAGTGGGCGCGTGGATTTGAAGACGGAGTATCTGCAA
TTCCACAATTTTTACGAAAACTTCAGCAGCCGAGAGTGTGGTATAAGAAA
ACCGGAAAATGACACAAAGCCGCCTTCTTGCAGCCTAACAAGGGCATCAG
CTACATTAACAACAACACCCAGAAGTATGTCAAAAGTTGAAAAGTCACAA
GAAGCACAAGCAACAGCAACATCAGTGGAAGTAGCAGCGGCAACAGCAGC
AACATCAGAAAAAACAGGC---ATACAAGCAACA----------------
--TCAGCAGCACAGTCGACTGCGGCGGCAACAACAGCAGAAAGAGAAGCA
ATTGCAACAGCAACATCAAGCGACACCACAGCAACACCAACACTCGCAGC
AGCAGCAGCA---------------ATACAATCAGCTGGCAACATCCCTG
CCCAGTTAACCACAAAAACGTTGCGGCCCACAGAAACAACTTCGTTAGCG
CAACTGCAGCGTCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGA
AACGCCAGCAAAGAACCTGCCAAGTTTGGCCCAGACAAAGGCAACAACAG
CGCTTCCCATTTTGGCAACACGAGATGCTGCCACA---------------
---------------------GCAACAACGGAAATAAATTCCGACAAGCC
AACGAACATTAGCGGTGCCACAAAAACAGTAGCAACATCAGCTGCAGAAA
TAGCAACACCACCAGCAATTGAAGTGCCACAAACCATTTTGGCCGGCAAA
AAATCTGACAAAATGCCAGCCGATAAGGCACACGAGACTTTATTAAAATA
CCCAACAAGGGACACATCCGGTCAAGTTGCAACAACGCCA----------
-----------CACAAACATGCAACACTGCAGCTGCACGTTAAGGATCGA
CATCTAATTGGCACACCGCTGCTGATGCACAAGGGCGATGTCCTATTGGT
GGATGCCGAGCAGTTGTTGCTGCCTGGTACGGCCACCGTGGCGGATGCGG
ATTCG------GAAGTTCTGGACCCGAGCCAACAA---CATCAGTCAGCG
GAGCAGGAAAAGCACCAGTCAGCGACTGATAAGCGGCAAGCGGATGCAAT
AAACGGCGACACG------------AAGTCGCCGGCGAAAGGCCACAAAA
AGAAACCATCGCTGAGCATCAAGAAGATGACCTACAGTACCAAACACGCG
GCAAAAACCGTGGAGGATATGGCAGCCACCTCGAAGACACCGCAACACCA
ACATAGCAGTGTGAACACACCCAAAGAGGCTGCTCCCGAGGAGTTGAGCA
CCTTTGCGCAGCTTAAAGCCTATGTGGAGCTAAAGAGCGAATCGAAACCG
GAACACCTAATGGACCAGCGGGAGGAAAACCATCATAATCTTACAGGAAA
TCATCCAGGAGTCATGCTCCTGGTGGCCTGCGTTTTGTTCATCGTCCTGC
TCGCCGGTTTGGCCCACGTCTATCGCTGTGAATTGCCTTGGCAAAGGAGC
AACCGCTCTGGTCAATTGCGACCGCATCATCAAAGACACCTAAACGAAAC
CGATGATGCGCACAGCTTCCTGCACTATCAGGGATCTGTGAACTCCAATG
GCGGTGATCCGGCTCGCCTGCAAAAGTGGCACCACAGCACGCGGAGAGAA
GCACCCTACAGCTCCCCGCTGCACAATCTACAAGCGCGGGAACTGCAACA
GCAACGCTGCCAGCAATTCTATAGCTCCTCGCTGGCGGACAAGAGCTCCT
CCACCTCGTCTTCCTCG------TCGGGAAGCAGTCGCAGTAGCCTGCAC
TCGCCCAGCAGAGATGACAGCTACTATATAGAGATGGCGCCCAGTAGTCC
ACCAGCAGCCAACCTGCCCAGTTTGCCCATGGAACTTTTGGGCAGCCGGA
GTAATGCCCTCGGATGCCGGACGGATCGAGTGGCAGCCACCGATCTGGGC
GGTACGACAGAGGCGGTACCCTCTTCGGCGGCGGCCATCAAGTCGGTGAG
CAGCAGACTGATGACGCCCAGTTCGCGGAGGCTGAACATCTGG-------
--------------------------------------------
>C2
ATGGTGAAAATCGTGAACCAACACTGTGATCTAGGCCTGGCCCTCCTCCT
GGCCTGGACGTGGCTAACAAGGCTGGTGGTGGCGGCCCATCTGGTCGTCA
TCCCCACCTCATCACGCCTGGCCGCCGAACGGGAGGAGCTGCAGTTGTCC
CGGCAGGACGTGGGACGGCTCAGCTACCAAAGTATCCATCGCATGTTGAG
GGACGAAAACGAACCTGCCAGCTTTCGGGGGGAATTGCGATACCAACAGA
AACGCCACAAAAGGGAGCTGGAGCTGAATGCGCCGGCCAACAAGCTTAAT
CTCACCCACCGCGACTTAAGGACATTCAATAGCACTGGCGGTCAGTGGAA
GGGGGACTTTCAAGTGATCACCGCCATGGATCTGAGCAGCAATCAACTGG
AGAGCCTCAGCTTGGACAACTTCAATCAACTGAGGCAGCTGGACTTGGGT
AACAACTCCCTGGAGGTTATACCCTTAAGTTTGGCAGACACCAATATGTC
ACTACCCTTTGTGACGCTCGATCTTTCCTGCAACAAATTCAGCCAAATTT
CTACGAGCTTTTTTGCCCAGAGATTGCCTCAGTTGAAAAATCTGAACCTG
GCTCACAATGAATTGCTAAACATTTCCCGGGAATCATTCTACAATTTGTT
GGAACTACAAACGTTAGTTCTCAGTCACAACAACATCTCGGATATTGACT
ACGAAACATTTTTGGCACTACCGAATCTGCAATATCTGGATTTATCCCAT
AACCGCTTGAGTGGATCCGCAATTCGTGCTCTGCAGGGAATTCCGGATTT
GGTCAGCCTTTCCATCGCTTACAATCCAGATGTGGGAGTGGCGATGCAGG
AGTTCGTCGCTTCCTGGAGCCTCAAAGAGTTGGATGCCAGTGGCACTGGA
TTGTGCCAGGTGCCTGCAGCTCTAGCCCAATCTGTGAGGACTCTCAAGTT
GTCCGACAACTGGCTCAAGGCAATTAATTGCGGTGACATGGACAGCTATC
CGCTCCTGCAGTACCTTGATCTCTCGCACTCCCGCATTGCCCAAGTGGAG
GACGATGCTCTGGGACGATTGGAGCTCCTCGAATCACTTTTCCTCGACCA
CAATCTTCTGATGCGAGTGCCCAGCAGTCTGCCACCATCGCTGGAACACT
TATTTCTGCAGCACAATCAGATAATGGAACTTCCGCCACAGGCTTTTGTG
GGATTGGTCAATCTACAGACTCTGGACTTATCTAACAATCGATTGATCTT
CCTGCCCCCGCTATCACTGCCCAAATTGCTCACCCTGAATCTGCAATCGT
CAGGGGTGGAGAGTGTTAGTCAATCGATAGTGCACACACTGCCACAGTTA
AGGGATCTTCTACTGGAGGACAACCCCATTAAGTGCAGCGATTTGCTGAG
CATTGCCGAATGGGCCAGTCCTTGCAGGTCAGTGGATGTGGGTCAATCGA
ATGGGGCAAGTGTGAGTGGGCGCGTGGATCTAAAAACGGAGTATCTGCAG
TTCCACAATTTCTACGAAAACTTCAGCAGCCGTGAGTGTGGTATAAGAAA
ACCGGAAAATGACACAAAGCCGCCTTCTTGCAGCCTGACAAGGGCAGCAG
CAACATTAACAACAACACCCAGAAGTATGTCAAAAGTTAAAAAGTCACAA
GAAGCACAACCAACAGCAACATCAGTGGAAGTAGCAGCGGCCGCAGCAGC
AACATCAGAAAAAACAGAC---ATACACGCAACACCAGCAGCAGCA----
--CCATCAGCACAGTCGACTGCGGCGGCAACAACAGCAGAAAGAGAAGCG
ATTGCAACAGCAACATCAAGCGACACCACAGCAACACCAACACTCGCAGC
AGCAGCAGCA---------------ATGCAATCAGCTGGCAACATCCCTG
CCCAGTTAACCACAAAAACGTTGCGGCCAACAGAAACAACTTCGTTAGCG
CAACTGCAGCGTCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGA
AACGCCAGCAAAGAACCTGCCAAGTTTGGCCCAGACAAAGGCAACAACAG
CGCTTCCCATTTTGGCAACACGAGATGCTGCTACA---------------
---------------------GCAACAACGGAAATAAATTCCGACAAGCC
AACGAACATTAGCGGTGCCACAAAAACAGTAGCAACATCAGCTGCAGAAA
TAGCAACACCACCAGCAATTGAAGTGCCACAAACCATTTTGGCCGGCAAA
AAATCTGACAAAATGCCAGCCGATAAGGCACACGAGACTTTATTAAAATA
CCCAACAAGGGACACATCCGGTCAAGTTGCAACAACGCCA----------
-----------CACAAACATGCAACACTGCAGCTGCACGTTAAGGATCGA
CATCTAATTGGCACACCGCTGCTGATGCACAAGGGCGATGTCCTTTTGGT
GGATGCCGAACAGCTGCTGCTGCCTGGTACGGCCACCGTGGCAGATGCGG
ATTCG------GAAGTCCTGGACCCGAGCCAACAA---CATCAGTCAGCG
GAGCAGGAAAAGCACCAGTCAGCGACTGATAAGCGACAAGCGGATGCAAT
AAACGGCGACACA------------AAGTCGCCGGCGAAAAGCCACAAAA
AGAAACCATCGCTGAGCATCAAGAAGATGACCTACAGTACCAAACACGCG
GCGAAAACAGTGGAGGATATGGCAGCCACCTCGAAGACACCGCAACACCA
ACATAGCAGTGTGAACACACCCAAAGAGGCTGCTCCCGAGGAGCTGAGCA
CCTTTGCGCAGCTCAAAGCCTATGTGGAGCTAAAGAGCGAATCGAAACCG
GAACACCTAATGGACCAGCGGGAGGAAAACCATCATAATCTTACAGGAAA
TCATCCCGGAGTCATGCTCCTTGTGGCCTGCGTTTTGTTCATCGTCCTGC
TCGCCGGTTTGGCCCACGTCTATCGCTGTGAATTGCCTTGGCAAAGGAGC
AACCGCTCTGGTCAATTGCGACCGCATCATCAAAGGCATCTAAACGAAAC
CGATGATGCGCATAGCTTCCTGCACTATCAGGGATCTGTGAACTCCAATG
GCGGAGATCCGGCTCGCCTGCAAAAGTGGCACCACAGCACGCGGAGAGAA
GCACCCTACAGCTCCCCGCTCCACAATCTGCAAGCGCGGGAACTGCAACA
GCAACGCTGCCAGCAATTCTATAGCTCCTCGCTAGCGGACAAGAGCTCCT
CCACCTCGTCATCCTCA------TCGGGAAGCAGTCGCAGTAGCCTGCAC
TCGCCCAGCAGAGATGACAGCTACTATATAGAGATGGCCCCCAGTAGTCC
AGCAGCAGCCAACCTGCCAAGTTTGCCCATGGAACTCTTGGGCAGCAGGA
GTAATGCCTACGGTTGCCGGACGGATCGAGTGGCAGCCACCGATCTGGGC
GGTACGACAGAGGCGGTACCCTCTTCGGCGGCGGCCATCAAGTCGGTGAG
CAGCAGACTGATGACGCCCAGTTCGCGGAGGCTGAACATCTGG-------
--------------------------------------------
>C3
ATGGTGAAAATCGTGAACCAACACTGTGATCTAGGCCTGGCCCTCCTCTT
GGTCTGGACGTGGCTAACAAGGCTGGTGGTGGCGACCCATCTGGTCGACA
TCCCCACCTCATCACGCCTGGCCGCCGAACGGGAGGAGCTGCAGCTATCC
CGGCAGGACGTGGGACGGCTCAGCTACCAGAGTATCCATCGCATGCTGAG
GGACGAAAACGAACCGGCCAGCTTTAGGGGGGAATTGCGATACCAACAGA
AACGCCACAAAAGGGAGCTGGAGCTCAATGCTCCGGCAAACAAGCTGAAT
CTCACCCACCGCGACTTAAAAACATTCAATAGCACTGGTGGTCAGTGGAA
GGGCGACTTTCAGGTCATCACCGCCATGGATCTGAGCAGCAATCAACTGG
AGAACGTCAGCTTGGACAACTTCAATCAACTAAGGCAGCTGGACTTGGGC
AATAACTCCCTGGAGGTTATACCCCTGAGTTTGGTCGACAACAATAAGTC
ACTACCCCTTGTAACGCTCGATCTATCCTGCAACGAATTCAGACAAATTT
CTACGAACTTTTTTGCCCAGCGATTGCCTCAGTTGAAACATCTGAACTTG
GCTCACAATGAGTTGGTAAACATTTCGCGGGAATCCTTCTACAATTTGTT
GGAACTACAAACGTTAATTCTCAGTCACAACAACATCTCGGATATAGACT
ACGAAACATTTTTGGCACTACCGAATCTGCAATATCTGGATTTATCCCAT
AACCGCTTGAGCGGATCCGCTATCAGAGCTCTGCAGGGAATTCCGGATTT
GGTCAGCCTTTCAATCGCTTACAATCCAGAAGTGGGAGTGGCGATGCAGG
AGTTCGTCGCATCCTGGAGCCTCAAGGAGTTGGATGCCAGTGGCACTGGA
TTGTGCCAGGTGCCTGCAGCTCTAGCCCAATCCGTGAGGACTCTCAAGTT
GTCCGACAATTGGCTCAAGGCAATTAATTGCGGCGACATGGACAGCTACC
CACTGCTGCAGTACCTTGATCTCTCGCATTCCCGCATTGCCCAAGTGGAG
GACGATGCCCTGGGACGACTGGAGCTCCTCGAGTCCCTTTTCCTCGACCA
CAATCTTCTAATGCGAGTGCCCAGCAGCCTGCCGCCATCGCTGGAACACC
TATTTCTGCAGCACAATCAGATAATGGAGCTTCCGCCTCAGGCTTTTGTG
GGATTGGTCAATCTGCAGACTCTGGACTTATCCAGCAATCGATTGATCTT
CCTGCCCCCGCTTTCGCTGCCCAAATTGCTCACCCTGAATCTGCAATCGT
CAGGGGTGGAGAGCGTTAGCCAATCGATAGTGCACACACTGCCACAGTTA
AGGGATCTTTTACTAGAGGACAACCCCATTAAGTGCAGCGATTTGCTGGG
CATTGCCGAATGGGCCAGTCCTTGCAGGTCAGTGGATGTGGGTCAATCGA
GTGGGGCAAGTGTGAGTGGGCGGGTGGACTTGAAGACGGAGTATCTGCAG
TTCCACAATTTTTACGTAAACTTCAGTAGCCGAGGGTGTGTCATAAGAAA
ACCGGAAAATGACACAAAGCTGCCTTCTTGCAGCCTGACAAGGGCAGCAG
CAGCATCAACAACAACACCCGGAAGTATGTCAAAAGTTAAAAAGTCAAAA
GAAACACAAGCACCAGCAACATCAGTGGAAGTAGCGGAGGCAACAGCAGC
AATATCAGAAAAAACAGAC---ACCCAAGCAACATCAGCTGCAGCAGCAG
ATACAGCAGAGCAGTCGACTGCAGCAGCAACAACAGCGGAAAAAGAAGCA
ATCCCAACAGCAACATCAAGCGACACCACAGCAACACCAGCACTCGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAATGCAATCAGCTGGCAACAGCCTTG
CCCAGTTAACCACAAAAACGTTGCGGCCAACAGAAACAACTTCGTTAGCG
CAACTGCAGCGTCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGA
AACGCCAGCAAAGAACCTGCCAAGTTTAGCCCAGACAATGGCAACAACAG
CGCTTCCCATTTTGGCAACACGAGATGCCGACACG---------------
---------------------GCAACAACAGAAATAAATTCCGACAAGCC
AACGAACATTAGCGGTGCCACAAAAACAGCAGCAACATCAGCTGCTGAAA
TACCAACAACACCAGCAATTGAAGTGCCACAAACCATTTTGGCCGGCAAA
AAATCTGACAAAATGCCAGCCGATAAGGCACAGGAGACTTTATTAAAATA
CCCAACAAGGGACACATCCGGTCAAGTTGCAACACCGCCA----------
-----------CACAAACATGCAACACTGCAGCTGCACGTTAAGGATCGA
CATCTAATTGGCACACCGCTGCTGATGCACAAGGGCGATGTCCTCCTGGT
GGACGCCGAGCAGTTGTTGCTCCCTGGTACGGCCACCGTGGCGGATGCGG
ATGCGGATTCGGAAGTTCTGGACTCGAGCCAACAA---CATCAGTCAGCG
GAGCAGGAAAAGCACCAGCCAGCGACTGATAAGCGACAAGCGGATGCAAT
AAACGGCGACACA------------AAGTCGCCG---AAAAGCCACAAGA
AGAAACCATCGCTGAGCATTAAGAAGATGACCTACACTACCAAACATGTG
GCAAAAGCCGCGGAGGACATGGCAGCCACCGCGAAGACATCGCAACATCA
ACATAGCAGTGTGAACACACCCAAGGAGTCTACTCCCGAGGAGCTGAGCA
CCTTTGCCCAGCTAAAAGCCTTCGTAGAGCTAAAGAGCGAATCGAAACCG
GAACACCTAATGGACCAGCGAGAGGAAAACCATCACAATCTCACAGGAAA
TCATCCCGGGGTTATGCTTCTGGTAGCCTGCGTTTTGTTCATCGTGCTGC
TAGCCGGTCTGGCCCACGTCTATCGCTGTGAATTGCCCTGGCAGAGGAGC
AGCCGCTCCGGACAATCGCGACCGCATCATCAAAGGCATCTGAACGAAAC
GGATGATGCGCACAGCTTCCTGCACTATCAGGGATCTGTGAACTCCAATG
GGGGAGATCCGGCTCGCCTGCAAAAGTGGCACCACAGCACGCGGCGAGAA
GCTCCCTACAGCTCCCCGCTGCACAATCTACAAGCGCGCGAACTGCAACA
GCAGCGCTGCCAGCAATTCTACAGCTCCTCGCTGGCGGACAAGAGCTCCT
CCACCTCGTCATCCTCG------TCGGGAAGCAGTCGCAGCAGCCTGCAC
TCGCCCAGCAGAGACGACAGCTACTACATAGAGATGGCGCCCAGTAGTCC
ACCAGCAGCCCACCTGCCCAGTTTGCCCATGGAACTCTTGGGCAGCAGGA
GCAATGTCCTCGGTTGCCGGGTGGACCGAGTGGCTGCCACCGATCTGGGC
GGTACGACAGAGGCGGTACCTTCCTCGGCGGCGACCATCAAGTCGGTCAG
CAGCAGACTGATGACGCCCAGTTCGCGGAGGCTGAACATCTGG-------
--------------------------------------------
>C4
ATGGTGAAAATCGTGAACCAACACTGTGATCTAGGCCTGGCCCTCCTCTT
TGCCTGGACGTGGCTAACAAGGCTGGTGGTGGCGGCCCATCTGGTCGACA
TCCCCACCTCATCACGCCTGGCCGCCGAGCGGGAGGAGCTGCAGTTATCC
CGGCAGGACGTGGGACGGCTCAGCTACCAGAGTATCCATCGCATGCTGAG
GGACGAAAACGAACCGGCCAGCATTCGGGGGGAATTGCGATACCAACAGA
AACGCCACAAAAGGGAGCTGGAGCTGAATGCTCCGGCAAACAAACTTAAT
CTCACCCACCGCGACTTGAGGACATTCAATAGCACTGGTGGTCAGTGGAA
GGGCGACTGTCAGGTGATCACAGCCATGGATCTGAGCAGCAATCAACTGG
AGAGCATCAGCTTGGACAAATTCAATCAACTAAGGCAGCTGGACTTGGGC
AATAACTCCCTGGAGGTTATACCCCTGAGCTTGGCCGACAACAATAAGTC
ACTACCCTTTGTAACGCTCGATCTATCCTGTAATAAATTCTGCCAAATGT
CTACGAGCTTTTTTGCCCAGCGATTGCCTCTGTTGAAACATCTTAACTTG
GCTCACAATGAGTTGGTAAACATTTCGCGGGAATCCTTCTACAATTTGTT
GGAACTACAAACGTTAGTTCTCAGTCACAACAAAATCTCGGATATAGACT
ATGAAACATTTTTGGCGCTACCGAATCTGCAATATCTGGATTTATCCCAT
AACCGCTTGAGTGGTTCCGCCATCCGAGCTCTGCAGGGAATTCCGGATTT
GGTCAGCCTTTCTATCGCTTACAATCCTGATGTGGGAGTTGCGATGCAGG
AGTTCGTCGCGTCCTGGAGCCTCAAGGAGTTGGATGCCAGTGGTACTGGA
TTGTGCCAGGTGCCTGCAGCTTTAGCCCAATCCGTGAGGACTCTCAGGTT
GGCCGACAACTGGCTTAAGGCAATTAATTGCGGTGACATGGACAGTTATC
CACTGCTGCAGTACCTCGATCTCTCGCATTCCCGCATTGCCCAAGTGGAG
GACGATGCTCTGGGACGACTGGAGCTCCTCGAATCCCTTTTCCTGGACCA
CAATCTTCTGATGCGAGTGCCCAGTAGCCTGCCGCCATCGCTGGAACACT
TATTTCTGCAGCACAATCAGATAATGGAGCTCCCGGCGCAGGCTTTTGTG
GGATTGGTCAATCTGCAGACTCTGGACTTATCCAACAACCGATTGATTTT
CCTGCCCCCACTTTCGCTGCCCAAATTGCTAACCCTGAATCTGCAATCGT
CAGGAGTGGAGAGCGTTAGCCAATCGATAGTGCACACACTGCCACAGTTA
AGGGATCTTTTGCTAGAGGACAACCCTATCAAGTGCAGCGATTTGCTGGG
CATTGCCGAATGGGCCAGTCCATGCAGGTCAGTGGATGTGGGTCAATCGA
ATGGGCCAAGCGTGAGTGGGCGGGTGGATTTGAAGACGGAGTATCTGCAG
TTCCACAATTTTAACGAAAACTTCAGTAGCCGAGAGTGTGGTATAAGAAA
ACCGGAAAATTACACAATGCCGCCTTCTTGCAGCGTGATAAGGGCAGCAG
CAACATCAACAACAACACCCAGAAGTATGTCAAAAGTTAAAAAGTCAAAA
GAAGCACAGGCAACAGCAACATCAGTGGAAGTAGCGGCGGCAACAGCAGC
AACATCAGAAAAAACAGAC---ATACAAGGAACATCAGCTGCA-------
-----------CAGTCCACTGCAGCAGCCACAACAGCGGAAAAAGAAACA
ATCCCAACAGCAACATCGAGCGACACCACAGCAACACCAACACTCGCAGC
AGCAACA------------------ATGCAATCAGCTGGCAACAGCCTCG
CCCAGTTAACCACAAAAACGTTGCGGCCAACAGAAACAACTTCGTTAGCG
CAACTGCAGCGTCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGA
AACGCCAGCAAAGAACCTGCCAAGTTTGGCCCAGACAAAGGCAACAACAG
CGCTTCCCATTTTGGCAACACGAGATGCCGGCACA---------------
---------------------GCAACAACAGAAATAAATTCCGACAACCC
AACGAGCATTAGCGGTGCCACAAAAACAGCAGCAGCATCAGCCGCTGAAA
TAGCAACAACACCAGCAATTGAAGTGCCGCAAACCATTTTGGCCGGCAAA
AAATCTGACAAAATGCCAGCCGATAAGGCACAGGAGACTTTATTAAAATA
CCCAACAAGGGACACGTCTGGTCAAATTGCAACACCACCA----------
-----------CACAAACATGCAACACTGCAGCTGCACGTTAAGGATCGA
CATCTAATTGGCACACCGCTGCTGATGCACAAGGGCGATGTCCTTTTGGT
GGATGCCGAGCAGTTGTTGCTCCCTGGTACGGCCACCGTGGCGGATGCGG
ATTCG------GAAGTTCTGGACTCCAGCCAACAA---CATCAGTCAGCG
GAGCAGGAAAAGCACCAGTCAGCGACTGATAAGCGACAAGCGGATGCAAT
AAACGGCGACACA------------AAGGCGCCGGCGAAAAGCCACAAAA
AGAAACCATCGCTGAGCATCAAAAAGATGACCTACAGTACCAAGCATGCG
GCAAAAACCGTGGAGGACATGGCAGCTACCTCGAAGACACCGCAGCACCA
ACATAGCAGTGTGAACACACCCAAGGAGGCTATTCCCGAGGAGCTGAGCA
CCTTTGCCCAGCTAAAAGCATATGTAGAGCTAAAGAGCGAATCGAAACCG
GAACACCTAATGGATCAGCGGGAGGGAACCCATCACAATCTTACAGGAAA
TCATCCCGGTGTTATGCTCCTGGTGTCCTGCGTTTTGTTTATCGTGCTGC
TTGCCGGTCTGGCCCACGTCTACCGCTGTGAATTGCCTTGGCAGAGGAGC
AGCCGTTCTGGACAATCACGACCGCATCATCAAAGGCATCTAAACGAAAC
GGATGACGCGCACAGCTTCCTGCACTATCAGGGATCTGTGAATTCCAATG
GGGGAGATCCGGCTCGCCTGCAAAAGTGGCACCACTGCACCCGGAGAGAA
GCTCCCTACAGCTCCCCGCTGCACAATCTACAAGCGCGCGAACTGCAACA
GCAACGCTGCCAGCAATTCTACAGCTCCTCTCTGGCGGACAGAAGCTCCT
CCACCTCGTCTTCCTCG------CCGGGAAGCAGTCGCAGTAGCCTGCAC
TCGAACAGCAGGGATGACAGCTACTATATAGAGATGGCACCCAGTAGTCC
ACCAGCAGCCAACCTGCCTAGTTTGCCCATGGAACTCTTGGGCAGCAGGA
GCAACGCCCTTGGCTGCCGGGCGGACCGAGTGGCAGCCACCGATCTGGGC
GGTACGACAGAGGCGGTACCTTCGTCGGCGGCGACCATCAAATCCGTGAG
CAGCAGACTGATGACGCCCAGTTCGCGCAGGCTGAACATCTGG-------
--------------------------------------------
>C5
ATGGTGAAAATTGTGAACCGACACTGTGATCTAGGCCTGGCCCTACTCCT
GGCCTGGACATGGCTAACAAGGCAGGTGGTTTCGGCCCATCTGGTCGATA
TTCCCACCTCATCTCGCCAGGCTGCCGAACGGGAGGAGCAGCAGTTATCC
CTGCAGAATGGCGGTGGTCTCAGCTACCCGAGCATTCATCGAATGCTGAG
GGACGAAAACGAACCGGCCAGCTTTCGAGGGGAATTACGATACCAACAGA
AACGTCACAAAAGAGAGTTGGAGCTGAATGCTCCAGCCAACAAGCTTAAT
CTCACCCACCGCGACTTGAGGAACTTTAATAGCAGTGGTGGTCAGTGGAA
GGGTGACTTTCAGGTGATCACTGGTATGGATCTGAGTAGTAATCAACTGG
AAAGTCTCAGTTTGAACAACTTCAATCAGCTGAGGCAACTGGATTTGGGT
AACAACTCTTTGGAGGTTATACCTCTGAGCTTAGCTGATACCAACAAATC
ACTTCCGTTCGTAACACTCGATCTTTCCTGCAACAAATTCAGCCAACTTT
ACACCAACTTCTTTGTCCAGCGATTGCCTGAACTTAAGAACCTCAACTTG
GCTTACAATCAATTGTTAAACATTTCAAGGGAATCATTCTACAATTTGTT
GGAACTACAAACATTAATACTCAGTCACAACAACATCACGGATATAGACT
ACGAAACCTTTTTGGCTCTGCCGAATCTGCAACATCTGGACTTATCCCAC
AACCGCTTGAGTGGCTCTGCAATACGAGCTTTGCAGGGAATTCCGGATTT
GGTCAGCCTTTCCATTGCCTACAATCCGGAAGTGGGAGTGGCCATGCAGG
AGTTCGTCGCCTCCTGGAGTCTCAAGGAGTTGGATGCTAGTGGCACTGGA
TTGTGCCAGGTGCCAGCAGCTTTAGCCCAATCTGTGAGGACTCTTAAGTT
ATCCGACAACTGGTTAAAGGCCATCAACTGCGGCGACATGGACAGCTATC
CCCTGCTGCAGTACCTTGATCTCTCTCACTCCCGGATTGCCCAAGTGGAA
GACGATGCCCTGGGACGTTTGGAGCTCCTTGAATCTCTTTTCTTGGACCA
CAATCTTCTAATGCGAGTGCCAAACAGTCTACCACCATCACTGGAACACC
TATTCCTACAGCACAACCAGATAATGGAACTGCCACCTCAGACTTTCGTT
GGCCTGGTCAACCTGCAGACCCTGGACTTGTCCCACAATCGTTTGATCTT
TCTGCCCGCTCTTGCACTGCCCAAATTGCTTACCCTAAATCTGCAATCTT
CAGGTGTAGAGAGTGTCAGCCAATCGATAGTGCACACATTGCCCCAGTTG
AGGGATCTCTTACTGGAGGACAATCCCATAAAATGCAGCGATTTGCTGGG
CATTGCCGAGTGGGCCAGCCCTTGCAGGTCAGTGGATGTGGGTCAGTCGA
ATGGGAGAAGTCCAAGTGGGTGGGTGGACCTCAAGACGGAGTATCTGCAA
TTTCACAATTTTTACGACAACTTCAGTAGCCGAGAGTGTGGAGCCAGGAA
ACCGGAAAATGACACAAAGCCGCCTTCTTGCAGCCTCACAAGTGCCACAG
CAGCATTAACAACAACGTCGAGAACTATGTCAAAAGTTAAAAAGTCAAAA
GGAGCAGACACGACAGCAGCAGCAGCAGCAGTGGCAACATCAGAAAAACA
CACAGCACATACAACAGACGACACACAGGCAACGTCAGCATCA-------
--------ACTCAGCCAACTACAGGAGCAACATCAGCGGAAAAAGCAGCA
ATTCCAACAGCAACACCAACTTCACCAACAGCA-----------------
-------------------------ATGCAATCAGCTGGCAACAGCGTTG
CCCAGTTAACCACAAAAACTTTGCGGCCAACAGAAACAACTTCGTTAGAG
CAACTGCAGCAGCGGCAACAAATGCCTGGCATGCCGGCCAAAACAACAGC
CACGCCAGCAAAGAACCTGCCAAGTTTGGCCCAGACAAAGGCAACAACAG
CGGTTCCCATTTTGGCAGCCCCAGCAGCAGCAACAACACCAGCAGCTGCA
GCAACAACAACAACAACAACAGCAGCAACAGCAATAAATTCCAACAAGCC
AACGAACATTAGCGGTGCCACAAAAACAGCAACA---------GAAATGG
TGGCAGCACCACCAGCAATTGAAGTGCCACAAACAATTTTGGCCGGAAAA
AAATCTGACAAAATGCCAACCGATAAGGCACACGAGACTTTATTAAAATA
CCCAACAAGGGACACATCCGGTCAAGCAGCAGCATCAGCAGCAGCAGCCG
CAACACTGTCACACAAACATGCAACATTGCAGCTGCACGTTAAGGATCGA
CATCTAATTGGCACACCGCTTCTGATGCACAAGGGCGATGTCCTTTTGGT
GGATGCCGAGCAGTTGTTGCTGCCTGGAACGGCAACCGTGGCGGATGCGG
ATTCG------GAAGTCTTGGACTCGAGCCAACAACAACATCAGTCGGCG
GAGCAGGAAAAGCACCAGTCAGCGGCTGATAAGCGACAAGCGGAAGCCAT
AAATGGCGACTCAAAGTCGTCGTCGTCGTCGCCACCAAAAAGTCACAAAA
AGAAGCCATCGCTGAGTATCAAGAAGATGACCTACAGTACCAAACATGCA
GTAAAAGCCGTTGAGGAACTACAAGCCACCTCCAAAACACCCCAGCACCA
ACACAGCAGTGTCAACACACCCAAAGAGGCTTCGCCGGAGGAACTCAGTA
CTTTCGCCCAGCTAAAGGCCTATGTGGAACTAAAAAGCGAATCGAAACCA
GAACATTTAATGGACCAGCGAGAGGAAAACCTTCACAATCTTACAGGAAA
TCATCCTGGAGTAATGTTGCTGGTAGCCTGCGTATTATTCATCGTATTGC
TAGCAGGATTGGCTCATGTCTATCGCTGTGAATTGCCCTGGCAGAGAAGC
AATCGACCTGGACAGATGCGCCCGCATCATCAAAGGCATCTAAACGACAC
CGATGATGCCCATAGTTTTCTGCACTATCAGGGCTCTGTGAATTCCAATG
GAGGAGATCCCGCCCGTTTACAAAAGTGGCATCATAGCACTCGGAGAGAA
GCTCCTTATAGTTCTCCACTTCACAATCTGCAAGCTCGCGAGTTGCAACA
GCAACGTTGCCAGCAATTCTATAGCTCATCTCTGGCGGACAAGAGCTCCT
CCACTGCCTCCTCGTCTTCCTTATCGGGAAGCAGCCGCAGTAGCCTGCAT
TCTCCCAGTAGAGATGATAGCTACTACATAGAGATGGCTCCCAGTAATCC
ACCATCCGCCACCCTGCCTAGTTTACCCATGGAACTGTTGGGCAGCAGGA
GTAATGGCCTAGGAAGCCGAACAGATCGAGTGGCTGCCACCGATCTGGGC
GGAACGACAGCAGCGGTACCTTCTTCAGCGACAGCCATCAAGTCTGTTAG
CAGCAGACTAATGGCTCCAAGTTCAAGGAGGTTGGGAATCTGG-------
--------------------------------------------
>C1
MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVDIPTSSRLAAEREEQQLS
RQDVGRLSYQSIHRMLRDENEPDSFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLESSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDAGQSNGASVSGRVDLKTEYLQ
FHNFYENFSSRECGIRKPENDTKPPSCSLTRASATLTTTPRSMSKVEKSQ
EAQATATSVEVAAATAATSEKTGoIQATooooooSAAQSTAAATTAEREA
IATATSSDTTATPTLAAAAAoooooIQSAGNIPAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAATooooo
oooooooATTEINSDKPTNISGATKTVATSAAEIATPPAIEVPQTILAGK
KSDKMPADKAHETLLKYPTRDTSGQVATTPoooooooHKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADSooEVLDPSQQoHQSA
EQEKHQSATDKRQADAINGDTooooKSPAKGHKKKPSLSIKKMTYSTKHA
AKTVEDMAATSKTPQHQHSSVNTPKEAAPEELSTFAQLKAYVELKSESKP
EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
NRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSSooSGSSRSSLH
SPSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCRTDRVAATDLG
GTTEAVPSSAAAIKSVSSRLMTPSSRRLNIW
>C2
MVKIVNQHCDLGLALLLAWTWLTRLVVAAHLVVIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLG
NNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNL
AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLSIAEWASPCRSVDVGQSNGASVSGRVDLKTEYLQ
FHNFYENFSSRECGIRKPENDTKPPSCSLTRAAATLTTTPRSMSKVKKSQ
EAQPTATSVEVAAAAAATSEKTDoIHATPAAAooPSAQSTAAATTAEREA
IATATSSDTTATPTLAAAAAoooooMQSAGNIPAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAATooooo
oooooooATTEINSDKPTNISGATKTVATSAAEIATPPAIEVPQTILAGK
KSDKMPADKAHETLLKYPTRDTSGQVATTPoooooooHKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADSooEVLDPSQQoHQSA
EQEKHQSATDKRQADAINGDTooooKSPAKSHKKKPSLSIKKMTYSTKHA
AKTVEDMAATSKTPQHQHSSVNTPKEAAPEELSTFAQLKAYVELKSESKP
EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
NRSGQLRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSSooSGSSRSSLH
SPSRDDSYYIEMAPSSPAAANLPSLPMELLGSRSNAYGCRTDRVAATDLG
GTTEAVPSSAAAIKSVSSRLMTPSSRRLNIW
>C3
MVKIVNQHCDLGLALLLVWTWLTRLVVATHLVDIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLKTFNSTGGQWKGDFQVITAMDLSSNQLENVSLDNFNQLRQLDLG
NNSLEVIPLSLVDNNKSLPLVTLDLSCNEFRQISTNFFAQRLPQLKHLNL
AHNELVNISRESFYNLLELQTLILSHNNISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFV
GLVNLQTLDLSSNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSSGASVSGRVDLKTEYLQ
FHNFYVNFSSRGCVIRKPENDTKLPSCSLTRAAAASTTTPGSMSKVKKSK
ETQAPATSVEVAEATAAISEKTDoTQATSAAAADTAEQSTAAATTAEKEA
IPTATSSDTTATPALAAAAAAAAAAMQSAGNSLAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTMATTALPILATRDADTooooo
oooooooATTEINSDKPTNISGATKTAATSAAEIPTTPAIEVPQTILAGK
KSDKMPADKAQETLLKYPTRDTSGQVATPPoooooooHKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADADSEVLDSSQQoHQSA
EQEKHQPATDKRQADAINGDTooooKSPoKSHKKKPSLSIKKMTYTTKHV
AKAAEDMAATAKTSQHQHSSVNTPKESTPEELSTFAQLKAFVELKSESKP
EHLMDQREENHHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
SRSGQSRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTSSSSooSGSSRSSLH
SPSRDDSYYIEMAPSSPPAAHLPSLPMELLGSRSNVLGCRVDRVAATDLG
GTTEAVPSSAATIKSVSSRLMTPSSRRLNIW
>C4
MVKIVNQHCDLGLALLFAWTWLTRLVVAAHLVDIPTSSRLAAEREELQLS
RQDVGRLSYQSIHRMLRDENEPASIRGELRYQQKRHKRELELNAPANKLN
LTHRDLRTFNSTGGQWKGDCQVITAMDLSSNQLESISLDKFNQLRQLDLG
NNSLEVIPLSLADNNKSLPFVTLDLSCNKFCQMSTSFFAQRLPLLKHLNL
AHNELVNISRESFYNLLELQTLVLSHNKISDIDYETFLALPNLQYLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLRLADNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPSSLPPSLEHLFLQHNQIMELPAQAFV
GLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGPSVSGRVDLKTEYLQ
FHNFNENFSSRECGIRKPENYTMPPSCSVIRAAATSTTTPRSMSKVKKSK
EAQATATSVEVAAATAATSEKTDoIQGTSAAooooooQSTAAATTAEKET
IPTATSSDTTATPTLAAATooooooMQSAGNSLAQLTTKTLRPTETTSLA
QLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAGTooooo
oooooooATTEINSDNPTSISGATKTAAASAAEIATTPAIEVPQTILAGK
KSDKMPADKAQETLLKYPTRDTSGQIATPPoooooooHKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADSooEVLDSSQQoHQSA
EQEKHQSATDKRQADAINGDTooooKAPAKSHKKKPSLSIKKMTYSTKHA
AKTVEDMAATSKTPQHQHSSVNTPKEAIPEELSTFAQLKAYVELKSESKP
EHLMDQREGTHHNLTGNHPGVMLLVSCVLFIVLLAGLAHVYRCELPWQRS
SRSGQSRPHHQRHLNETDDAHSFLHYQGSVNSNGGDPARLQKWHHCTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADRSSSTSSSSooPGSSRSSLH
SNSRDDSYYIEMAPSSPPAANLPSLPMELLGSRSNALGCRADRVAATDLG
GTTEAVPSSAATIKSVSSRLMTPSSRRLNIW
>C5
MVKIVNRHCDLGLALLLAWTWLTRQVVSAHLVDIPTSSRQAAEREEQQLS
LQNGGGLSYPSIHRMLRDENEPASFRGELRYQQKRHKRELELNAPANKLN
LTHRDLRNFNSSGGQWKGDFQVITGMDLSSNQLESLSLNNFNQLRQLDLG
NNSLEVIPLSLADTNKSLPFVTLDLSCNKFSQLYTNFFVQRLPELKNLNL
AYNQLLNISRESFYNLLELQTLILSHNNITDIDYETFLALPNLQHLDLSH
NRLSGSAIRALQGIPDLVSLSIAYNPEVGVAMQEFVASWSLKELDASGTG
LCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVE
DDALGRLELLESLFLDHNLLMRVPNSLPPSLEHLFLQHNQIMELPPQTFV
GLVNLQTLDLSHNRLIFLPALALPKLLTLNLQSSGVESVSQSIVHTLPQL
RDLLLEDNPIKCSDLLGIAEWASPCRSVDVGQSNGRSPSGWVDLKTEYLQ
FHNFYDNFSSRECGARKPENDTKPPSCSLTSATAALTTTSRTMSKVKKSK
GADTTAAAAAVATSEKHTAHTTDDTQATSASoooooTQPTTGATSAEKAA
IPTATPTSPTAooooooooooooooMQSAGNSVAQLTTKTLRPTETTSLE
QLQQRQQMPGMPAKTTATPAKNLPSLAQTKATTAVPILAAPAAATTPAAA
ATTTTTTAATAINSNKPTNISGATKTAToooEMVAAPPAIEVPQTILAGK
KSDKMPTDKAHETLLKYPTRDTSGQAAASAAAAATLSHKHATLQLHVKDR
HLIGTPLLMHKGDVLLVDAEQLLLPGTATVADADSooEVLDSSQQQHQSA
EQEKHQSAADKRQAEAINGDSKSSSSSPPKSHKKKPSLSIKKMTYSTKHA
VKAVEELQATSKTPQHQHSSVNTPKEASPEELSTFAQLKAYVELKSESKP
EHLMDQREENLHNLTGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRS
NRPGQMRPHHQRHLNDTDDAHSFLHYQGSVNSNGGDPARLQKWHHSTRRE
APYSSPLHNLQARELQQQRCQQFYSSSLADKSSSTASSSSLSGSSRSSLH
SPSRDDSYYIEMAPSNPPSATLPSLPMELLGSRSNGLGSRTDRVAATDLG
GTTAAVPSSATAIKSVSSRLMAPSSRRLGIW
MrBayes v3.2.2 x64
(Bayesian Analysis of Phylogeny)
Distributed under the GNU General Public License
Type "help" or "help <command>" for information
on the commands that are available.
Type "about" for authorship and general
information about the program.
Executing file "/opt/ADOPS/1/2mit-PD/batch/allfiles/mrbayes/input.fasta.fasta.mrb"
UNIX line termination
Longest line length = 63
Parsing file
Expecting NEXUS formatted file
Reading data block
Allocated taxon set
Allocated matrix
Defining new matrix with 5 taxa and 3594 characters
Missing data coded as ?
Data matrix is interleaved
Data is Dna
Gaps coded as -
Matching characters coded as .
Taxon 1 -> C1
Taxon 2 -> C2
Taxon 3 -> C3
Taxon 4 -> C4
Taxon 5 -> C5
Successfully read matrix
Setting default partition (does not divide up characters)
Setting model defaults
Seed (for generating default start values) = 1480093056
Setting output file names to "/opt/ADOPS/1/2mit-PD/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run<i>.<p|t>"
Exiting data block
Reading mrbayes block
Setting autoclose to yes
Setting nowarnings to yes
Defining charset called first_pos
Defining charset called second_pos
Defining charset called third_pos
Defining partition called by_codon
Setting by_codon as the partition, dividing characters into 3 parts.
Setting model defaults
Seed (for generating default start values) = 1969739849
Setting Nst to 6 for partition 1
Setting Nst to 6 for partition 2
Setting Nst to 6 for partition 3
Setting Rates to Invgamma for partition 1
Setting Rates to Invgamma for partition 2
Setting Rates to Invgamma for partition 3
Successfully set likelihood model parameters to all
applicable data partitions
Unlinking
Setting number of generations to 1000000
Running Markov chain
MCMC stamp = 7843527427
Seed = 1823930664
Swapseed = 1480093056
Model settings:
Settings for partition 1 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
Gamma shape parameter is exponentially
distributed with parameter (2.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Gamma distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Settings for partition 2 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
Gamma shape parameter is exponentially
distributed with parameter (2.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Gamma distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Settings for partition 3 --
Datatype = DNA
Nucmodel = 4by4
Nst = 6
Substitution rates, expressed as proportions
of the rate sum, have a Dirichlet prior
(1.00,1.00,1.00,1.00,1.00,1.00)
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Invgamma
Gamma shape parameter is exponentially
distributed with parameter (2.00).
Proportion of invariable sites is uniformly dist-
ributed on the interval (0.00,1.00).
Gamma distribution is approximated using 4 categories.
Likelihood summarized over all rate categories in each generation.
Active parameters:
Partition(s)
Parameters 1 2 3
------------------------
Revmat 1 1 1
Statefreq 2 2 2
Shape 3 3 4
Pinvar 5 5 5
Ratemultiplier 6 6 6
Topology 7 7 7
Brlens 8 8 8
------------------------
Parameters can be linked or unlinked across partitions using 'link' and 'unlink'
1 -- Parameter = Revmat{all}
Type = Rates of reversible rate matrix
Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
Partitions = All
2 -- Parameter = Pi{all}
Type = Stationary state frequencies
Prior = Dirichlet
Partitions = All
3 -- Parameter = Alpha{1,2}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(2.00)
Partitions = 1 and 2
4 -- Parameter = Alpha{3}
Type = Shape of scaled gamma distribution of site rates
Prior = Exponential(2.00)
Partition = 3
5 -- Parameter = Pinvar{all}
Type = Proportion of invariable sites
Prior = Uniform(0.00,1.00)
Partitions = All
6 -- Parameter = Ratemultiplier{all}
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
Partitions = All
7 -- Parameter = Tau{all}
Type = Topology
Prior = All topologies equally probable a priori
Partitions = All
Subparam. = V{all}
8 -- Parameter = V{all}
Type = Branch lengths
Prior = Unconstrained:Exponential(10.0)
Partitions = All
The MCMC sampler will use the following moves:
With prob. Chain will use move
1.06 % Dirichlet(Revmat{all})
1.06 % Slider(Revmat{all})
1.06 % Dirichlet(Pi{all})
1.06 % Slider(Pi{all})
2.13 % Multiplier(Alpha{1,2})
2.13 % Multiplier(Alpha{3})
2.13 % Slider(Pinvar{all})
10.64 % ExtSPR(Tau{all},V{all})
10.64 % ExtTBR(Tau{all},V{all})
10.64 % NNI(Tau{all},V{all})
10.64 % ParsSPR(Tau{all},V{all})
31.91 % Multiplier(V{all})
10.64 % Nodeslider(V{all})
4.26 % TLMultiplier(V{all})
Division 1 has 88 unique site patterns
Division 2 has 62 unique site patterns
Division 3 has 152 unique site patterns
Initializing conditional likelihoods
Using standard SSE likelihood calculator for division 1 (single-precision)
Using standard SSE likelihood calculator for division 2 (single-precision)
Using standard SSE likelihood calculator for division 3 (single-precision)
Initializing invariable-site conditional likelihoods
Initial log likelihoods and log prior probs for run 1:
Chain 1 -- -10065.216368 -- -25.624409
Chain 2 -- -10065.216368 -- -25.624409
Chain 3 -- -10058.092041 -- -25.624409
Chain 4 -- -10065.216368 -- -25.624409
Initial log likelihoods and log prior probs for run 2:
Chain 1 -- -10064.613834 -- -25.624409
Chain 2 -- -10110.160275 -- -25.624409
Chain 3 -- -10065.216368 -- -25.624409
Chain 4 -- -10117.050133 -- -25.624409
Using a relative burnin of 25.0 % for diagnostics
Chain results (1000000 generations requested):
0 -- [-10065.216] (-10065.216) (-10058.092) (-10065.216) * [-10064.614] (-10110.160) (-10065.216) (-10117.050)
500 -- [-8818.565] (-8835.901) (-8854.050) (-8883.515) * [-8806.386] (-8882.085) (-8885.414) (-8866.877) -- 0:00:00
1000 -- [-8774.697] (-8804.022) (-8794.227) (-8839.323) * (-8778.394) (-8828.920) (-8803.741) [-8784.524] -- 0:00:00
1500 -- (-8730.941) (-8756.461) [-8722.238] (-8737.929) * (-8753.104) [-8740.556] (-8766.289) (-8753.638) -- 0:11:05
2000 -- (-8701.490) [-8711.458] (-8700.887) (-8709.095) * (-8713.211) [-8695.952] (-8707.765) (-8696.049) -- 0:08:19
2500 -- (-8676.591) [-8674.709] (-8672.735) (-8695.569) * (-8699.975) (-8689.414) [-8680.977] (-8684.017) -- 0:06:39
3000 -- (-8674.696) [-8669.789] (-8674.419) (-8676.227) * (-8679.213) (-8678.312) [-8675.990] (-8676.898) -- 0:05:32
3500 -- (-8671.468) (-8666.100) [-8668.288] (-8674.203) * (-8678.373) (-8674.670) (-8668.723) [-8673.006] -- 0:04:44
4000 -- [-8668.200] (-8672.990) (-8667.986) (-8671.362) * (-8679.097) [-8668.513] (-8675.926) (-8666.370) -- 0:08:18
4500 -- (-8663.688) (-8673.844) [-8666.194] (-8668.133) * (-8672.278) (-8670.418) (-8674.928) [-8666.902] -- 0:07:22
5000 -- (-8661.771) (-8668.673) [-8664.020] (-8669.561) * [-8667.038] (-8666.532) (-8669.626) (-8676.731) -- 0:06:38
Average standard deviation of split frequencies: 0.000000
5500 -- (-8666.183) (-8667.833) (-8671.672) [-8669.843] * (-8675.215) (-8670.275) (-8664.154) [-8666.573] -- 0:06:01
6000 -- (-8668.051) [-8665.115] (-8671.890) (-8677.997) * (-8668.038) (-8670.651) [-8668.712] (-8662.227) -- 0:08:17
6500 -- [-8665.948] (-8672.979) (-8670.199) (-8672.479) * (-8663.208) (-8672.380) (-8668.964) [-8669.801] -- 0:07:38
7000 -- [-8666.276] (-8661.099) (-8666.902) (-8662.315) * (-8671.922) [-8663.861] (-8665.150) (-8670.383) -- 0:07:05
7500 -- (-8667.103) (-8659.335) (-8677.548) [-8668.221] * (-8670.116) [-8669.427] (-8665.238) (-8674.374) -- 0:06:37
8000 -- [-8663.755] (-8670.468) (-8669.187) (-8669.600) * (-8663.341) (-8669.164) (-8663.344) [-8667.214] -- 0:08:16
8500 -- (-8665.853) (-8670.780) (-8666.570) [-8664.378] * [-8665.438] (-8670.113) (-8670.636) (-8668.852) -- 0:07:46
9000 -- (-8660.815) (-8671.173) (-8671.026) [-8666.506] * [-8667.050] (-8669.406) (-8664.848) (-8668.372) -- 0:07:20
9500 -- [-8668.013] (-8664.438) (-8668.469) (-8669.672) * (-8668.336) (-8675.298) [-8664.528] (-8667.151) -- 0:06:57
10000 -- [-8662.944] (-8668.193) (-8670.588) (-8670.523) * [-8666.341] (-8671.761) (-8667.241) (-8667.087) -- 0:06:36
Average standard deviation of split frequencies: 0.000000
10500 -- (-8662.292) (-8665.861) (-8667.372) [-8666.975] * (-8668.594) (-8674.951) (-8664.761) [-8668.596] -- 0:07:51
11000 -- (-8663.993) (-8677.982) [-8667.335] (-8663.555) * [-8669.675] (-8670.907) (-8666.795) (-8672.407) -- 0:07:29
11500 -- (-8664.475) (-8672.577) [-8669.289] (-8665.419) * (-8668.219) (-8671.527) (-8662.850) [-8667.326] -- 0:07:09
12000 -- (-8666.798) [-8669.810] (-8667.058) (-8670.132) * (-8671.805) (-8669.161) [-8663.722] (-8666.942) -- 0:06:51
12500 -- (-8668.806) (-8674.464) (-8666.369) [-8666.768] * [-8665.226] (-8666.905) (-8667.203) (-8664.113) -- 0:07:54
13000 -- (-8668.157) [-8670.488] (-8665.199) (-8667.089) * (-8670.449) [-8668.032] (-8668.222) (-8670.639) -- 0:07:35
13500 -- (-8668.912) (-8670.369) (-8668.451) [-8666.368] * [-8667.526] (-8672.214) (-8663.368) (-8666.766) -- 0:07:18
14000 -- (-8667.911) [-8665.718] (-8666.795) (-8670.695) * (-8668.069) (-8668.641) (-8661.717) [-8667.796] -- 0:07:02
14500 -- (-8663.330) (-8664.440) (-8668.722) [-8664.600] * (-8669.160) [-8672.225] (-8663.960) (-8668.491) -- 0:07:55
15000 -- [-8665.040] (-8663.924) (-8666.989) (-8666.767) * [-8667.121] (-8662.878) (-8663.580) (-8668.471) -- 0:07:39
Average standard deviation of split frequencies: 0.000000
15500 -- [-8665.453] (-8664.045) (-8668.464) (-8664.933) * (-8667.675) (-8666.058) (-8663.706) [-8671.896] -- 0:07:24
16000 -- [-8663.526] (-8673.383) (-8668.727) (-8668.850) * (-8672.188) (-8666.775) (-8670.675) [-8669.485] -- 0:07:10
16500 -- (-8667.109) (-8666.975) [-8667.406] (-8676.087) * (-8666.468) [-8666.066] (-8670.239) (-8676.075) -- 0:07:56
17000 -- (-8664.683) (-8669.130) [-8663.131] (-8670.927) * (-8669.710) (-8667.224) [-8664.799] (-8665.486) -- 0:07:42
17500 -- (-8664.473) (-8664.257) [-8667.807] (-8673.147) * (-8664.023) (-8665.141) (-8666.564) [-8670.906] -- 0:07:29
18000 -- [-8684.476] (-8671.133) (-8668.110) (-8668.539) * [-8664.138] (-8668.654) (-8665.526) (-8668.908) -- 0:07:16
18500 -- (-8677.112) (-8662.204) [-8665.114] (-8681.418) * (-8666.317) (-8662.294) [-8665.868] (-8665.393) -- 0:07:04
19000 -- (-8666.232) [-8663.479] (-8664.891) (-8667.192) * (-8663.168) (-8667.316) (-8667.345) [-8671.122] -- 0:07:44
19500 -- (-8664.340) [-8664.331] (-8662.601) (-8662.708) * (-8665.783) [-8667.029] (-8662.051) (-8670.649) -- 0:07:32
20000 -- (-8665.991) (-8669.204) (-8663.281) [-8662.929] * (-8667.401) [-8662.411] (-8668.693) (-8662.607) -- 0:07:21
Average standard deviation of split frequencies: 0.000000
20500 -- (-8667.068) [-8665.415] (-8668.095) (-8665.184) * (-8669.207) (-8666.970) (-8666.786) [-8667.037] -- 0:07:10
21000 -- (-8664.351) (-8664.108) (-8664.478) [-8667.678] * (-8666.624) (-8663.410) (-8664.561) [-8665.525] -- 0:07:46
21500 -- [-8659.921] (-8664.140) (-8666.680) (-8667.648) * (-8670.497) (-8667.762) (-8668.633) [-8664.158] -- 0:07:35
22000 -- (-8663.155) [-8668.485] (-8667.196) (-8666.982) * (-8668.697) (-8673.036) [-8665.624] (-8665.607) -- 0:07:24
22500 -- (-8664.387) (-8672.988) (-8667.296) [-8664.575] * (-8671.088) (-8671.311) [-8665.491] (-8667.908) -- 0:07:14
23000 -- (-8670.146) (-8665.784) (-8671.516) [-8663.927] * [-8664.227] (-8677.767) (-8675.247) (-8673.315) -- 0:07:47
23500 -- (-8666.895) (-8666.071) (-8670.524) [-8664.626] * [-8666.141] (-8674.273) (-8669.946) (-8672.191) -- 0:07:37
24000 -- [-8666.426] (-8666.605) (-8663.891) (-8672.497) * (-8663.182) (-8667.403) (-8661.461) [-8664.627] -- 0:07:27
24500 -- [-8666.455] (-8668.391) (-8670.812) (-8660.624) * [-8666.385] (-8665.325) (-8661.464) (-8674.544) -- 0:07:17
25000 -- [-8668.680] (-8672.482) (-8664.433) (-8659.158) * (-8665.834) (-8675.539) [-8668.522] (-8664.198) -- 0:07:09
Average standard deviation of split frequencies: 0.000000
25500 -- [-8670.395] (-8662.329) (-8663.407) (-8668.065) * (-8663.081) (-8675.831) [-8667.035] (-8669.911) -- 0:07:38
26000 -- (-8665.358) (-8668.798) (-8666.489) [-8661.847] * [-8666.001] (-8671.384) (-8670.108) (-8667.986) -- 0:07:29
26500 -- (-8665.114) [-8664.387] (-8669.526) (-8668.121) * (-8666.935) (-8672.573) [-8671.145] (-8670.075) -- 0:07:20
27000 -- (-8667.720) (-8666.450) (-8671.157) [-8671.075] * (-8668.694) [-8666.047] (-8666.223) (-8664.064) -- 0:07:12
27500 -- [-8673.249] (-8664.982) (-8666.215) (-8671.119) * (-8667.791) [-8664.165] (-8668.806) (-8665.887) -- 0:07:39
28000 -- (-8672.016) (-8669.951) (-8667.876) [-8665.047] * [-8667.795] (-8663.693) (-8664.010) (-8671.878) -- 0:07:31
28500 -- (-8667.589) [-8664.910] (-8668.153) (-8663.909) * (-8666.790) [-8665.684] (-8667.444) (-8673.299) -- 0:07:23
29000 -- (-8671.927) (-8669.949) [-8671.037] (-8672.572) * (-8667.478) (-8669.768) [-8667.028] (-8671.643) -- 0:07:15
29500 -- [-8669.315] (-8667.452) (-8676.260) (-8671.762) * (-8673.317) [-8666.017] (-8670.048) (-8673.768) -- 0:07:40
30000 -- (-8679.948) (-8666.856) (-8671.757) [-8667.761] * (-8675.519) [-8662.643] (-8668.309) (-8670.126) -- 0:07:32
Average standard deviation of split frequencies: 0.000000
30500 -- (-8671.581) (-8664.698) (-8666.326) [-8675.325] * (-8666.920) (-8661.757) (-8663.876) [-8667.392] -- 0:07:25
31000 -- [-8662.565] (-8665.345) (-8672.558) (-8667.897) * (-8668.359) (-8665.973) [-8665.230] (-8665.491) -- 0:07:17
31500 -- [-8665.855] (-8669.095) (-8676.116) (-8666.930) * (-8667.256) [-8668.502] (-8672.962) (-8666.592) -- 0:07:41
32000 -- (-8669.747) (-8667.036) [-8661.984] (-8662.431) * (-8670.828) [-8673.778] (-8674.140) (-8667.328) -- 0:07:33
32500 -- (-8664.161) (-8664.486) (-8672.610) [-8667.713] * (-8667.384) (-8664.661) (-8673.163) [-8673.259] -- 0:07:26
33000 -- [-8666.476] (-8670.434) (-8673.518) (-8662.018) * (-8672.800) (-8670.386) (-8672.206) [-8665.798] -- 0:07:19
33500 -- [-8664.386] (-8669.641) (-8667.837) (-8670.586) * (-8667.347) (-8668.134) (-8664.193) [-8668.608] -- 0:07:12
34000 -- [-8667.821] (-8663.433) (-8669.540) (-8670.561) * (-8666.800) [-8661.242] (-8666.248) (-8665.107) -- 0:07:34
34500 -- [-8667.120] (-8663.380) (-8669.571) (-8664.826) * [-8664.492] (-8663.807) (-8664.968) (-8671.901) -- 0:07:27
35000 -- (-8664.045) [-8670.479] (-8668.793) (-8668.218) * (-8675.382) [-8669.063] (-8662.071) (-8673.746) -- 0:07:21
Average standard deviation of split frequencies: 0.000000
35500 -- [-8662.787] (-8666.856) (-8672.531) (-8673.412) * [-8660.114] (-8667.606) (-8663.457) (-8665.966) -- 0:07:14
36000 -- [-8663.681] (-8665.475) (-8675.568) (-8668.621) * [-8668.358] (-8674.133) (-8663.781) (-8667.123) -- 0:07:35
36500 -- (-8676.645) [-8665.853] (-8670.557) (-8664.260) * (-8667.260) (-8662.885) [-8666.583] (-8662.540) -- 0:07:28
37000 -- [-8669.666] (-8667.766) (-8670.265) (-8668.839) * (-8669.513) (-8668.776) [-8665.327] (-8662.167) -- 0:07:22
37500 -- (-8664.294) (-8668.537) (-8668.750) [-8668.452] * (-8664.780) (-8666.250) [-8661.384] (-8666.756) -- 0:07:16
38000 -- (-8670.451) (-8676.471) (-8671.565) [-8668.029] * (-8671.180) [-8666.632] (-8670.676) (-8673.514) -- 0:07:35
38500 -- (-8669.173) (-8671.447) (-8668.221) [-8670.749] * (-8663.109) [-8667.950] (-8663.920) (-8670.504) -- 0:07:29
39000 -- (-8675.151) (-8662.931) [-8668.670] (-8666.620) * (-8664.519) (-8670.808) [-8668.406] (-8666.343) -- 0:07:23
39500 -- (-8672.357) [-8668.720] (-8664.080) (-8670.836) * (-8664.532) [-8671.969] (-8664.548) (-8669.662) -- 0:07:17
40000 -- [-8667.806] (-8667.946) (-8669.396) (-8671.016) * [-8664.859] (-8670.810) (-8669.096) (-8672.267) -- 0:07:36
Average standard deviation of split frequencies: 0.000000
40500 -- [-8665.660] (-8668.278) (-8667.284) (-8669.242) * (-8668.235) (-8670.840) (-8664.929) [-8674.701] -- 0:07:30
41000 -- (-8672.221) (-8671.229) [-8676.580] (-8673.007) * (-8664.042) (-8663.754) [-8668.029] (-8670.974) -- 0:07:24
41500 -- (-8665.847) [-8670.907] (-8668.026) (-8673.233) * (-8668.255) (-8675.333) [-8665.097] (-8675.323) -- 0:07:18
42000 -- (-8667.282) (-8670.043) (-8666.448) [-8673.038] * [-8664.145] (-8666.404) (-8671.041) (-8671.713) -- 0:07:13
42500 -- (-8672.387) [-8664.698] (-8666.507) (-8670.267) * (-8670.273) [-8673.262] (-8668.995) (-8665.621) -- 0:07:30
43000 -- (-8671.463) [-8667.067] (-8669.562) (-8667.225) * [-8670.455] (-8668.417) (-8669.220) (-8664.280) -- 0:07:25
43500 -- (-8667.356) [-8672.230] (-8668.954) (-8672.702) * (-8666.663) [-8663.117] (-8662.650) (-8664.307) -- 0:07:19
44000 -- (-8675.783) [-8667.999] (-8665.938) (-8671.790) * (-8659.702) (-8672.101) [-8665.151] (-8668.329) -- 0:07:14
44500 -- [-8674.125] (-8670.446) (-8670.845) (-8669.030) * (-8665.479) (-8667.352) [-8664.652] (-8673.573) -- 0:07:30
45000 -- [-8672.758] (-8672.465) (-8675.959) (-8666.609) * (-8670.193) [-8665.850] (-8665.470) (-8669.868) -- 0:07:25
Average standard deviation of split frequencies: 0.000000
45500 -- (-8672.156) [-8670.040] (-8671.743) (-8664.026) * (-8669.574) (-8677.040) [-8665.182] (-8666.708) -- 0:07:20
46000 -- (-8670.567) (-8666.908) [-8668.667] (-8669.141) * (-8672.139) (-8664.955) [-8673.333] (-8676.686) -- 0:07:15
46500 -- (-8667.938) (-8666.022) [-8662.469] (-8661.466) * (-8673.837) [-8670.521] (-8678.968) (-8663.079) -- 0:07:31
47000 -- (-8670.366) (-8665.302) (-8669.001) [-8667.779] * [-8667.423] (-8662.077) (-8672.241) (-8665.661) -- 0:07:26
47500 -- [-8674.060] (-8667.662) (-8666.154) (-8664.903) * (-8665.536) [-8664.814] (-8672.609) (-8668.382) -- 0:07:21
48000 -- (-8670.161) (-8666.181) (-8663.075) [-8669.448] * (-8664.465) (-8669.116) (-8668.632) [-8670.187] -- 0:07:16
48500 -- (-8668.900) [-8666.218] (-8666.301) (-8672.032) * [-8669.480] (-8671.209) (-8665.994) (-8673.390) -- 0:07:31
49000 -- (-8666.103) (-8665.766) (-8669.285) [-8668.074] * (-8672.659) (-8669.191) [-8667.405] (-8672.487) -- 0:07:26
49500 -- (-8671.532) (-8666.562) [-8670.869] (-8666.644) * [-8664.044] (-8669.606) (-8666.450) (-8670.929) -- 0:07:21
50000 -- (-8668.768) (-8664.511) [-8669.905] (-8667.079) * [-8664.823] (-8668.924) (-8674.354) (-8668.933) -- 0:07:17
Average standard deviation of split frequencies: 0.000000
50500 -- (-8669.647) (-8669.162) [-8667.616] (-8666.191) * (-8675.522) (-8670.332) [-8671.893] (-8669.684) -- 0:07:12
51000 -- (-8667.420) (-8673.991) [-8668.302] (-8671.118) * [-8668.409] (-8665.276) (-8665.820) (-8672.717) -- 0:07:26
51500 -- (-8667.618) (-8665.249) (-8670.754) [-8668.452] * [-8669.895] (-8667.205) (-8667.757) (-8664.598) -- 0:07:22
52000 -- (-8668.840) (-8667.745) (-8668.621) [-8669.326] * (-8664.406) [-8665.910] (-8670.218) (-8663.705) -- 0:07:17
52500 -- (-8666.772) (-8667.943) [-8661.615] (-8677.836) * (-8663.539) (-8669.520) (-8672.422) [-8663.981] -- 0:07:13
53000 -- (-8670.378) [-8668.016] (-8664.058) (-8668.703) * (-8663.759) [-8668.059] (-8668.243) (-8663.740) -- 0:07:26
53500 -- [-8663.170] (-8668.343) (-8668.203) (-8666.658) * (-8665.708) (-8661.545) (-8669.954) [-8666.842] -- 0:07:22
54000 -- (-8669.744) [-8670.998] (-8675.592) (-8668.833) * (-8668.099) [-8671.903] (-8669.318) (-8669.889) -- 0:07:17
54500 -- (-8667.602) (-8670.369) (-8667.855) [-8665.862] * (-8671.925) [-8668.344] (-8665.851) (-8668.708) -- 0:07:13
55000 -- (-8670.510) (-8663.698) (-8665.737) [-8665.525] * (-8668.212) [-8660.022] (-8661.049) (-8669.535) -- 0:07:26
Average standard deviation of split frequencies: 0.000000
55500 -- (-8665.468) [-8662.922] (-8667.942) (-8665.066) * (-8662.539) (-8665.769) [-8665.345] (-8669.191) -- 0:07:22
56000 -- (-8672.451) [-8661.975] (-8669.175) (-8669.073) * (-8667.399) (-8669.539) [-8668.269] (-8668.396) -- 0:07:18
56500 -- (-8666.794) (-8665.646) [-8667.767] (-8663.554) * (-8662.045) (-8672.037) (-8662.924) [-8669.312] -- 0:07:14
57000 -- [-8668.454] (-8666.525) (-8663.964) (-8667.648) * (-8667.500) (-8672.352) [-8668.349] (-8666.302) -- 0:07:26
57500 -- (-8664.116) (-8666.065) (-8661.527) [-8668.250] * (-8667.521) (-8669.800) (-8669.285) [-8668.070] -- 0:07:22
58000 -- [-8664.320] (-8666.101) (-8667.783) (-8665.572) * (-8675.582) (-8670.211) (-8667.571) [-8662.079] -- 0:07:18
58500 -- (-8670.001) (-8667.003) (-8664.163) [-8660.971] * (-8669.455) (-8672.462) (-8668.198) [-8667.799] -- 0:07:14
59000 -- (-8670.255) (-8668.219) (-8663.022) [-8665.181] * (-8668.273) [-8665.193] (-8669.000) (-8666.256) -- 0:07:26
59500 -- (-8667.669) [-8670.686] (-8665.576) (-8669.829) * [-8667.175] (-8664.615) (-8678.344) (-8666.396) -- 0:07:22
60000 -- (-8667.345) (-8672.683) [-8666.430] (-8665.567) * [-8664.059] (-8664.984) (-8671.972) (-8666.819) -- 0:07:18
Average standard deviation of split frequencies: 0.000000
60500 -- (-8664.733) (-8674.144) [-8666.862] (-8672.068) * [-8665.560] (-8668.013) (-8667.484) (-8669.114) -- 0:07:14
61000 -- (-8667.850) (-8665.288) (-8667.176) [-8665.252] * (-8664.143) (-8669.731) (-8669.230) [-8667.398] -- 0:07:11
61500 -- (-8663.684) (-8666.382) (-8668.573) [-8665.916] * (-8663.663) [-8670.613] (-8663.123) (-8663.754) -- 0:07:22
62000 -- (-8669.051) (-8674.740) [-8668.375] (-8666.339) * (-8662.864) (-8668.695) (-8669.110) [-8664.786] -- 0:07:18
62500 -- (-8676.692) (-8672.246) (-8661.518) [-8670.598] * (-8666.655) (-8670.258) [-8665.253] (-8670.952) -- 0:07:15
63000 -- (-8673.971) [-8667.517] (-8665.590) (-8666.467) * (-8677.357) [-8672.714] (-8666.725) (-8665.599) -- 0:07:11
63500 -- [-8667.784] (-8664.725) (-8668.112) (-8670.708) * [-8673.894] (-8674.494) (-8673.905) (-8670.282) -- 0:07:22
64000 -- (-8663.908) (-8661.118) [-8664.423] (-8668.182) * (-8670.956) (-8676.877) [-8668.910] (-8671.620) -- 0:07:18
64500 -- (-8664.520) [-8663.606] (-8660.141) (-8669.436) * [-8663.056] (-8680.857) (-8670.962) (-8665.913) -- 0:07:15
65000 -- (-8665.055) (-8670.335) (-8667.448) [-8671.686] * (-8659.458) (-8666.639) (-8665.732) [-8669.265] -- 0:07:11
Average standard deviation of split frequencies: 0.000000
65500 -- (-8667.320) [-8665.735] (-8668.867) (-8677.267) * (-8659.720) [-8671.516] (-8671.465) (-8668.922) -- 0:07:22
66000 -- (-8666.093) [-8665.553] (-8666.252) (-8672.855) * (-8672.607) (-8673.082) (-8668.999) [-8672.459] -- 0:07:18
66500 -- (-8671.977) (-8664.067) (-8668.597) [-8674.835] * (-8667.197) (-8670.855) (-8673.375) [-8671.246] -- 0:07:15
67000 -- [-8669.888] (-8669.272) (-8669.803) (-8671.573) * (-8666.998) (-8671.577) [-8677.824] (-8675.082) -- 0:07:11
67500 -- (-8668.179) [-8665.871] (-8671.334) (-8660.724) * (-8668.218) [-8668.776] (-8671.615) (-8669.059) -- 0:07:22
68000 -- (-8665.572) (-8665.762) (-8664.493) [-8668.992] * (-8668.824) [-8668.029] (-8669.420) (-8667.369) -- 0:07:18
68500 -- [-8663.800] (-8666.038) (-8669.981) (-8666.497) * (-8664.464) (-8664.252) [-8665.071] (-8672.305) -- 0:07:15
69000 -- (-8669.110) (-8666.877) [-8670.168] (-8667.228) * (-8672.611) (-8663.138) [-8672.387] (-8669.077) -- 0:07:11
69500 -- (-8673.911) (-8668.256) [-8668.553] (-8672.900) * (-8668.749) (-8666.777) (-8670.578) [-8668.137] -- 0:07:08
70000 -- (-8665.474) (-8668.968) [-8667.493] (-8666.113) * (-8671.257) [-8670.900] (-8664.077) (-8667.746) -- 0:07:18
Average standard deviation of split frequencies: 0.000000
70500 -- (-8670.148) [-8666.534] (-8668.715) (-8659.049) * (-8666.748) (-8673.769) (-8666.783) [-8661.452] -- 0:07:15
71000 -- [-8669.350] (-8668.466) (-8668.917) (-8665.587) * (-8669.404) (-8670.594) (-8675.210) [-8665.205] -- 0:07:11
71500 -- (-8665.282) (-8667.763) (-8670.780) [-8659.961] * [-8665.080] (-8665.720) (-8668.995) (-8660.218) -- 0:07:08
72000 -- (-8664.200) (-8671.786) (-8668.901) [-8660.312] * (-8664.322) (-8665.995) (-8671.858) [-8660.897] -- 0:07:18
72500 -- (-8666.876) [-8665.372] (-8666.301) (-8660.950) * (-8665.902) [-8667.638] (-8675.799) (-8663.134) -- 0:07:14
73000 -- (-8669.493) (-8673.298) (-8664.486) [-8661.654] * [-8670.294] (-8665.448) (-8672.484) (-8664.949) -- 0:07:11
73500 -- (-8667.212) [-8665.155] (-8664.912) (-8673.216) * (-8667.855) (-8667.317) [-8663.613] (-8662.400) -- 0:07:08
74000 -- [-8664.913] (-8660.838) (-8661.173) (-8666.739) * (-8670.180) (-8666.625) [-8666.326] (-8669.618) -- 0:07:17
74500 -- (-8667.321) (-8664.937) (-8665.549) [-8669.427] * (-8665.205) [-8666.201] (-8666.551) (-8671.502) -- 0:07:14
75000 -- (-8664.820) (-8668.425) [-8666.095] (-8668.527) * (-8664.010) (-8670.084) (-8666.629) [-8666.821] -- 0:07:11
Average standard deviation of split frequencies: 0.000000
75500 -- (-8667.799) [-8665.031] (-8669.448) (-8666.792) * (-8666.191) [-8666.895] (-8664.379) (-8664.091) -- 0:07:08
76000 -- (-8669.358) [-8666.260] (-8665.130) (-8663.401) * (-8660.409) (-8672.734) (-8662.951) [-8665.665] -- 0:07:17
76500 -- (-8669.248) [-8671.274] (-8673.338) (-8669.995) * (-8664.004) (-8666.133) (-8670.821) [-8661.345] -- 0:07:14
77000 -- (-8672.033) (-8679.321) (-8670.174) [-8668.422] * (-8667.539) [-8663.500] (-8671.698) (-8665.666) -- 0:07:11
77500 -- (-8668.617) (-8665.957) [-8666.004] (-8667.674) * (-8673.687) (-8661.575) [-8668.805] (-8668.679) -- 0:07:08
78000 -- (-8668.365) (-8664.744) (-8671.877) [-8668.536] * (-8666.540) (-8665.362) [-8669.917] (-8666.729) -- 0:07:05
78500 -- (-8663.376) [-8664.506] (-8669.174) (-8670.690) * (-8667.121) [-8663.482] (-8667.538) (-8665.597) -- 0:07:14
79000 -- (-8672.297) [-8664.753] (-8675.023) (-8662.477) * [-8660.593] (-8662.982) (-8670.584) (-8664.232) -- 0:07:11
79500 -- (-8667.523) (-8665.880) (-8671.411) [-8665.407] * [-8663.523] (-8678.028) (-8667.399) (-8661.093) -- 0:07:08
80000 -- (-8669.018) [-8673.347] (-8669.701) (-8663.438) * (-8668.298) (-8671.189) [-8668.150] (-8662.907) -- 0:07:05
Average standard deviation of split frequencies: 0.000000
80500 -- [-8665.981] (-8672.051) (-8673.184) (-8664.065) * (-8665.369) (-8670.367) [-8665.688] (-8665.456) -- 0:07:14
81000 -- [-8666.982] (-8672.591) (-8665.780) (-8660.648) * [-8665.609] (-8663.661) (-8664.591) (-8665.520) -- 0:07:11
81500 -- [-8666.800] (-8672.011) (-8666.377) (-8673.251) * (-8669.392) (-8672.221) [-8664.160] (-8666.828) -- 0:07:08
82000 -- (-8667.795) [-8668.090] (-8661.301) (-8667.989) * (-8666.795) (-8667.396) (-8668.678) [-8667.103] -- 0:07:05
82500 -- [-8667.404] (-8671.568) (-8672.770) (-8667.122) * (-8674.949) (-8670.700) [-8662.015] (-8660.786) -- 0:07:13
83000 -- (-8669.203) (-8675.611) (-8667.788) [-8661.721] * (-8671.381) (-8674.791) [-8667.513] (-8667.305) -- 0:07:10
83500 -- (-8672.427) [-8666.876] (-8664.338) (-8666.212) * (-8672.616) (-8670.517) (-8664.505) [-8662.856] -- 0:07:08
84000 -- (-8675.030) [-8663.378] (-8664.951) (-8660.981) * (-8675.305) (-8667.216) [-8665.326] (-8666.749) -- 0:07:05
84500 -- (-8671. 