--- EXPERIMENT NOTES




 --- EXPERIMENT PROPERTIES

#Mon Oct 31 21:36:17 WET 2016
codeml.models=0 1 2 3 7 8
mrbayes.mpich=
mrbayes.ngen=1000000
tcoffee.alignMethod=CLUSTALW2
tcoffee.params=
tcoffee.maxSeqs=0
codeml.bin=codeml
mrbayes.tburnin=2500
codeml.dir=
input.sequences=
mrbayes.pburnin=2500
mrbayes.bin=mb_adops
tcoffee.bin=t_coffee_ADOPS
mrbayes.dir=/usr/bin/
tcoffee.dir=
tcoffee.minScore=3
input.fasta=/opt/ADOPS/116/CG32165-PA/input.fasta
input.names=
mrbayes.params=
codeml.params=



 --- PSRF SUMMARY

      Estimated marginal likelihoods for runs sampled in files
"/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
(Use the harmonic mean for Bayes factor comparisons of models)

(Values are saved to the file /opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat)

Run   Arithmetic mean   Harmonic mean
--------------------------------------
1      -7654.75         -7664.98
2      -7654.60         -7664.00
--------------------------------------
TOTAL    -7654.67         -7664.60
--------------------------------------


Model parameter summaries over the runs sampled in files
"/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p":
Summaries are based on a total of 3002 samples from 2 runs.
Each run produced 2001 samples of which 1501 samples were included.
Parameter summaries saved to file "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat".

95% HPD Interval
--------------------
Parameter         Mean      Variance     Lower       Upper       Median    min ESS*  avg ESS    PSRF+
------------------------------------------------------------------------------------------------------
TL{all}         0.253791    0.000225    0.226957    0.286035    0.253916   1391.44   1397.20    1.000
r(A<->C){all}   0.099613    0.000208    0.072751    0.129448    0.099146   1097.67   1228.87    1.000
r(A<->G){all}   0.263201    0.000462    0.223005    0.303813    0.262845   1048.61   1110.84    1.000
r(A<->T){all}   0.122977    0.000269    0.091398    0.154550    0.122250   1154.80   1162.09    1.000
r(C<->G){all}   0.072276    0.000138    0.048338    0.094151    0.071481   1055.43   1157.28    1.001
r(C<->T){all}   0.347638    0.000613    0.302919    0.398089    0.347129    969.53    992.69    1.000
r(G<->T){all}   0.094295    0.000181    0.068905    0.121260    0.094028   1210.58   1240.48    1.000
pi(A){all}      0.240928    0.000051    0.225830    0.253815    0.240951    931.27   1133.61    1.000
pi(C){all}      0.249864    0.000052    0.235155    0.263070    0.250057   1064.48   1148.79    1.000
pi(G){all}      0.263581    0.000055    0.249605    0.278065    0.263658    995.89   1037.68    1.000
pi(T){all}      0.245627    0.000051    0.232065    0.260006    0.245679   1053.81   1078.94    1.000
alpha{1,2}      0.129326    0.005825    0.000228    0.264692    0.124955   1088.64   1138.78    1.000
alpha{3}        2.094149    0.561937    0.877404    3.593801    1.967577   1140.06   1224.43    1.000
pinvar{all}     0.081743    0.004485    0.000008    0.213950    0.065267    920.08   1134.60    1.000
------------------------------------------------------------------------------------------------------
* Convergence diagnostic (ESS = Estimated Sample Size); min and avg values
correspond to minimal and average ESS among runs.
ESS value below 100 may indicate that the parameter is undersampled.
+ Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman
and Rubin, 1992) should approach 1.0 as runs converge.


Setting sumt conformat to Simple



 --- CODEML SUMMARY

Model 1: NearlyNeutral	-7362.032942
Model 2: PositiveSelection	-7362.032942
Model 0: one-ratio	-7380.041279
Model 3: discrete	-7361.58339
Model 7: beta	-7361.622495
Model 8: beta&w>1	-7361.622497


Model 0 vs 1	36.01667400000042

Model 2 vs 1	0.0

Model 8 vs 7	4.0000013541430235E-6
>C1
MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM
DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV
SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL
LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL
QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD
KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN
IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL
VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ
NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ
RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD
APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI
AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVPAINSQEHAELIFGCIRD
IFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQPEL
FSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCATYF
DALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQALSE
AIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDTVE
NDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESAVA
LIKEIRANYPELFSKVSNMNPEVFNYVQALo
>C2
MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM
DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI
AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVPAINSQEHAELIFACIRD
IFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQPEL
FSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCATYF
DALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQALSE
AIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDTVE
NDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSAVA
LIKEISAKYPELFNKVSNMNPEVFNYVQALo
>C3
MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM
DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI
AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVPAINSQEHAELIFACIRD
IFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQPEL
FSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCATYF
DALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQALSE
AIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDTVE
NDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSAVA
LIKEISANYPELFNKVSNMNPEVFNYVQALo
>C4
MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT
VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM
DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV
SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL
LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE
KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ
NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL
RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLILDT
TDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAPY
LQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEIA
IPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCIR
DVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQPE
LFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSATY
FDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQALS
EAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDVV
ENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESAV
ALIKEIRANYPEQFNQVSNANPEVFNYVQTL
>C5
MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT
VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM
DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV
SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL
LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE
KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL
VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ
NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL
RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN
LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLILDT
TDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAPY
LQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEIA
IPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCIR
DVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQPE
LFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSATY
FDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQALS
EAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDVI
ENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESAV
ALIKEIRANYPEQFNQVSNANPEVFNYVQTL
CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE:  ], CPU=0.00 sec, SCORE=100, Nseq=5, Len=1083 

C1              MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV
C2              MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
C3              MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
C4              MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
C5              MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
                *********.***  **:***:** **:***************:****.*

C1              QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
C2              QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
C3              QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT
C4              QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT
C5              QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT
                ***::**:***:*:.*************:.**:*****************

C1              VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM
C2              VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM
C3              VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM
C4              VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM
C5              VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM
                ** *********  :::.* **************** *********::**

C1              DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV
C2              DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
C3              DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
C4              DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV
C5              DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV
                ********:* **:***:** ***************.*:*:* *:*****

C1              SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL
C2              SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
C3              SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
C4              SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL
C5              SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL
                ****.********:*******.**.*** * ******:*:*:*.*:****

C1              LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL
C2              LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
C3              LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
C4              LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
C5              LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
                *******:***** *: *:*.: :*****:******:*****:*******

C1              QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD
C2              QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
C3              QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
C4              EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE
C5              EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE
                :***:*:***:*** *::* ******** .***.**:********** *:

C1              KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN
C2              KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
C3              KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
C4              KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
C5              KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
                *******:*********:***********************:***:****

C1              IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL
C2              IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
C3              IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
C4              IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL
C5              IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL
                *:***::****:**.***********:*******:************.**

C1              VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ
C2              VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
C3              VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
C4              VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ
C5              VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ
                *:***:* *:.***************** ::*:*:*****:*****:***

C1              NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ
C2              NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
C3              NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
C4              NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL
C5              NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL
                *: :****.*:******:*** :*:*******::*******:***** * 

C1              RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN
C2              RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
C3              RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
C4              RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
C5              RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN
                ********* ****:*:************************** ******

C1              LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD
C2              LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
C3              LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
C4              LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLIL-D
C5              LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLIL-D
                *********:****:************** ***::*:**:*.::** * *

C1              APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP
C2              AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
C3              AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
C4              TTDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAP
C5              TTDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAP
                :.::****::******** * *****:.******::*:***:********

C1              YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI
C2              YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI
C3              YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI
C4              YLQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEI
C5              YLQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEI
                *****************.*** ****:**.**.**:** **.********

C1              AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVP--AINSQEHAELIFGCI
C2              AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVP--AINSQEHAELIFACI
C3              AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVP--AINSQEHAELIFACI
C4              AIPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCI
C5              AIPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCI
                *******::****:*.** ::** * **** *   ***.********.**

C1              RDIFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQP
C2              RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP
C3              RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP
C4              RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP
C5              RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP
                **:***:*************:* .*****:************:***::**

C1              ELFSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCAT
C2              ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT
C3              ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT
C4              ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT
C5              ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT
                ***********:**:*****.*: *:** **::******. :*****.**

C1              YFDALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQAL
C2              YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQAL
C3              YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQAL
C4              YFDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQAL
C5              YFDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQAL
                ***.* *:**:*::***.*:*****:****:*:******::***.*****

C1              SEAIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDT
C2              SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT
C3              SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT
C4              SEAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV
C5              SEAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV
                ******** *.*:*************: *****.***** *******:*.

C1              VENDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESA
C2              VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA
C3              VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA
C4              VENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA
C5              IENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA
                :***:*********:****** *******.****: **:**** ***:**

C1              VALIKEIRANYPELFSKVSNMNPEVFNYVQALo
C2              VALIKEISAKYPELFNKVSNMNPEVFNYVQALo
C3              VALIKEISANYPELFNKVSNMNPEVFNYVQALo
C4              VALIKEIRANYPEQFNQVSNANPEVFNYVQTL-
C5              VALIKEIRANYPEQFNQVSNANPEVFNYVQTL-
                ******* *:*** *.:*** *********:* 




PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
-full_log      	S	[0] 
-genepred_score	S	[0] 	nsd
-run_name      	S	[0] 
-mem_mode      	S	[0] 	mem
-extend        	D	[1] 	1 
-extend_mode   	S	[0] 	very_fast_triplet
-max_n_pair    	D	[0] 	10 
-seq_name_for_quadruplet	S	[0] 	all
-compact       	S	[0] 	default
-clean         	S	[0] 	no
-do_self       	FL	[0] 	0
-do_normalise  	D	[0] 	1000 
-template_file 	S	[0] 
-setenv        	S	[0] 	0
-template_mode 	S	[0] 
-flip          	D	[0] 	0 
-remove_template_file	D	[0] 	0 
-profile_template_file	S	[0] 
-in            	S	[0] 
-seq           	S	[0] 
-aln           	S	[0] 
-method_limits 	S	[0] 
-method        	S	[0] 
-lib           	S	[0] 
-profile       	S	[0] 
-profile1      	S	[0] 
-profile2      	S	[0] 
-pdb           	S	[0] 
-relax_lib     	D	[0] 	1 
-filter_lib    	D	[0] 	0 
-shrink_lib    	D	[0] 	0 
-out_lib       	W_F	[0] 	no
-out_lib_mode  	S	[0] 	primary
-lib_only      	D	[0] 	0 
-outseqweight  	W_F	[0] 	no
-dpa           	FL	[0] 	0
-seq_source    	S	[0] 	ANY
-cosmetic_penalty	D	[0] 	0 
-gapopen       	D	[0] 	0 
-gapext        	D	[0] 	0 
-fgapopen      	D	[0] 	0 
-fgapext       	D	[0] 	0 
-nomatch       	D	[0] 	0 
-newtree       	W_F	[0] 	default
-tree          	W_F	[0] 	NO
-usetree       	R_F	[0] 
-tree_mode     	S	[0] 	nj
-distance_matrix_mode	S	[0] 	ktup
-distance_matrix_sim_mode	S	[0] 	idmat_sim1
-quicktree     	FL	[0] 	0
-outfile       	W_F	[0] 	default
-maximise      	FL	[1] 	1
-output        	S	[1] 	score_ascii	html	score_ascii
-len           	D	[0] 	0 
-infile        	R_F	[1] 	/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
-matrix        	S	[0] 	default
-tg_mode       	D	[0] 	1 
-profile_mode  	S	[0] 	cw_profile_profile
-profile_comparison	S	[0] 	profile
-dp_mode       	S	[0] 	linked_pair_wise
-ktuple        	D	[0] 	1 
-ndiag         	D	[0] 	0 
-diag_threshold	D	[0] 	0 
-diag_mode     	D	[0] 	0 
-sim_matrix    	S	[0] 	vasiliky
-transform     	S	[0] 
-extend_seq    	FL	[0] 	0
-outorder      	S	[0] 	input
-inorder       	S	[0] 	aligned
-seqnos        	S	[0] 	off
-case          	S	[0] 	keep
-cpu           	D	[0] 	0 
-maxnseq       	D	[0] 	1000 
-maxlen        	D	[0] 	-1 
-sample_dp     	D	[0] 	0 
-weight        	S	[0] 	default
-seq_weight    	S	[0] 	no
-align         	FL	[1] 	1
-mocca         	FL	[0] 	0
-domain        	FL	[0] 	0
-start         	D	[0] 	0 
-len           	D	[0] 	0 
-scale         	D	[0] 	0 
-mocca_interactive	FL	[0] 	0
-method_evaluate_mode	S	[0] 	default
-evaluate_mode 	S	[1] 	t_coffee_fast
-get_type      	FL	[0] 	0
-clean_aln     	D	[0] 	0 
-clean_threshold	D	[1] 	1 
-clean_iteration	D	[1] 	1 
-clean_evaluate_mode	S	[0] 	t_coffee_fast
-extend_matrix 	FL	[0] 	0
-prot_min_sim  	D	[40] 	40 
-prot_max_sim  	D	[90] 	90 
-prot_min_cov  	D	[40] 	40 
-pdb_type      	S	[0] 	d
-pdb_min_sim   	D	[35] 	35 
-pdb_max_sim   	D	[100] 	100 
-pdb_min_cov   	D	[50] 	50 
-pdb_blast_server	W_F	[0] 	EBI
-blast         	W_F	[0] 
-blast_server  	W_F	[0] 	EBI
-pdb_db        	W_F	[0] 	pdb
-protein_db    	W_F	[0] 	uniprot
-method_log    	W_F	[0] 	no
-struc_to_use  	S	[0] 
-cache         	W_F	[0] 	use
-align_pdb_param_file	W_F	[0] 	no
-align_pdb_hasch_mode	W_F	[0] 	hasch_ca_trace_bubble
-external_aligner	S	[0] 	NO
-msa_mode      	S	[0] 	tree
-master        	S	[0] 	no
-blast_nseq    	D	[0] 	0 
-lalign_n_top  	D	[0] 	10 
-iterate       	D	[1] 	0 
-trim          	D	[0] 	0 
-split         	D	[0] 	0 
-trimfile      	S	[0] 	default
-split         	D	[0] 	0 
-split_nseq_thres	D	[0] 	0 
-split_score_thres	D	[0] 	0 
-check_pdb_status	D	[0] 	0 
-clean_seq_name	D	[0] 	0 
-seq_to_keep   	S	[0] 
-dpa_master_aln	S	[0] 
-dpa_maxnseq   	D	[0] 	0 
-dpa_min_score1	D	[0] 
-dpa_min_score2	D	[0] 
-dpa_keep_tmpfile	FL	[0] 	0
-dpa_debug     	D	[0] 	0 
-multi_core    	S	[0] 	templates_jobs_relax_msa_evaluate
-n_core        	D	[0] 	0 
-max_n_proc    	D	[0] 	0 
-lib_list      	S	[0] 
-prune_lib_mode	S	[0] 	5
-tip           	S	[0] 	none
-rna_lib       	S	[0] 
-no_warning    	D	[0] 	0 
-run_local_script	D	[0] 	0 
-plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:
plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 plugins       	S	[0] 	default
-proxy         	S	[0] 	unset
-email         	S	[0] 
-clean_overaln 	D	[0] 	0 
-overaln_param 	S	[0] 
-overaln_mode  	S	[0] 
-overaln_model 	S	[0] 
-overaln_threshold	D	[0] 	0 
-overaln_target	D	[0] 	0 
-overaln_P1    	D	[0] 	0 
-overaln_P2    	D	[0] 	0 
-overaln_P3    	D	[0] 	0 
-overaln_P4    	D	[0] 	0 
-exon_boundaries	S	[0] 
-dump          	S	[0] 	no
-display       	D	[0] 	100 

INPUT FILES
	Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln  Format clustal_aln
	Input File (M) proba_pair 

Identify Master Sequences [no]:

Master Sequences Identified
INPUT SEQUENCES: 5 SEQUENCES  [PROTEIN]
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked
  Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked

	Multi Core Mode: 72 processors:

	--- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	--- Process Method/Library/Aln Mproba_pair
	xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln
	xxx Retrieved Mproba_pair

	All Methods Retrieved

MANUAL PENALTIES: gapopen=0 gapext=0

	Library Total Size: [21764]

Library Relaxation: Multi_proc [72]
 
Relaxation Summary: [21764]--->[21760]



UN-WEIGHTED MODE: EVERY SEQUENCE WEIGHTS 1


OUTPUT RESULTS
	#### File Type= MSA             Format= score_ascii     Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii
	#### File Type= MSA             Format= html            Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.html
	#### File Type= MSA             Format= score_ascii     Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii

# Command Line: t_coffee_ADOPS -infile /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln -output score_ascii -special_mode evaluate -evaluate_mode t_coffee_fast  [PROGRAM:T-COFFEE]
# T-COFFEE Memory Usage: Current= 29.468 Mb, Max= 31.304 Mb
# Results Produced with T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427)
# T-COFFEE is available from http://www.tcoffee.org
# Register on: https://groups.google.com/group/tcoffee/
>C1
MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM
DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV
SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL
LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL
QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD
KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN
IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL
VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ
NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ
RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD
APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI
AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVP--AINSQEHAELIFGCI
RDIFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQP
ELFSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCAT
YFDALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQAL
SEAIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDT
VENDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESA
VALIKEIRANYPELFSKVSNMNPEVFNYVQALo
>C2
MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM
DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI
AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVP--AINSQEHAELIFACI
RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP
ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT
YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQAL
SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT
VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA
VALIKEISAKYPELFNKVSNMNPEVFNYVQALo
>C3
MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM
DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI
AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVP--AINSQEHAELIFACI
RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP
ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT
YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQAL
SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT
VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA
VALIKEISANYPELFNKVSNMNPEVFNYVQALo
>C4
MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT
VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM
DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV
SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL
LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE
KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ
NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL
RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLIL-D
TTDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAP
YLQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEI
AIPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCI
RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP
ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT
YFDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQAL
SEAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV
VENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA
VALIKEIRANYPEQFNQVSNANPEVFNYVQTL-
>C5
MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT
VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM
DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV
SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL
LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE
KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL
VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ
NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL
RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN
LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLIL-D
TTDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAP
YLQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEI
AIPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCI
RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP
ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT
YFDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQAL
SEAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV
IENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA
VALIKEIRANYPEQFNQVSNANPEVFNYVQTL-

FORMAT of file /tmp/tmp7942645057944739868aln Not Supported[FATAL:T-COFFEE]
>C1
MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM
DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV
SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL
LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL
QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD
KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN
IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL
VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ
NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ
RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD
APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI
AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVP--AINSQEHAELIFGCI
RDIFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQP
ELFSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCAT
YFDALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQAL
SEAIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDT
VENDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESA
VALIKEIRANYPELFSKVSNMNPEVFNYVQALo
>C2
MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM
DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI
AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVP--AINSQEHAELIFACI
RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP
ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT
YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQAL
SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT
VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA
VALIKEISAKYPELFNKVSNMNPEVFNYVQALo
>C3
MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM
DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI
AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVP--AINSQEHAELIFACI
RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP
ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT
YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQAL
SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT
VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA
VALIKEISANYPELFNKVSNMNPEVFNYVQALo
>C4
MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT
VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM
DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV
SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL
LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE
KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ
NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL
RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLIL-D
TTDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAP
YLQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEI
AIPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCI
RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP
ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT
YFDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQAL
SEAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV
VENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA
VALIKEIRANYPEQFNQVSNANPEVFNYVQTL-
>C5
MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT
VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM
DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV
SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL
LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE
KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL
VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ
NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL
RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN
LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLIL-D
TTDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAP
YLQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEI
AIPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCI
RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP
ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT
YFDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQAL
SEAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV
IENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA
VALIKEIRANYPEQFNQVSNANPEVFNYVQTL-
input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln I:1083 S:99 BS:1083
# TC_SIMILARITY_MATRIX_FORMAT_01
# SEQ_INDEX C1 0
# SEQ_INDEX C2 1
# SEQ_INDEX C3 2
# SEQ_INDEX C4 3
# SEQ_INDEX C5 4
# PW_SEQ_DISTANCES 
BOT	    0    1	 91.40 C1	 C2	 91.40
TOP	    1    0	 91.40 C2	 C1	 91.40
BOT	    0    2	 91.40 C1	 C3	 91.40
TOP	    2    0	 91.40 C3	 C1	 91.40
BOT	    0    3	 83.97 C1	 C4	 83.97
TOP	    3    0	 83.97 C4	 C1	 83.97
BOT	    0    4	 83.78 C1	 C5	 83.78
TOP	    4    0	 83.78 C5	 C1	 83.78
BOT	    1    2	 99.26 C2	 C3	 99.26
TOP	    2    1	 99.26 C3	 C2	 99.26
BOT	    1    3	 84.80 C2	 C4	 84.80
TOP	    3    1	 84.80 C4	 C2	 84.80
BOT	    1    4	 84.15 C2	 C5	 84.15
TOP	    4    1	 84.15 C5	 C2	 84.15
BOT	    2    3	 84.89 C3	 C4	 84.89
TOP	    3    2	 84.89 C4	 C3	 84.89
BOT	    2    4	 84.15 C3	 C5	 84.15
TOP	    4    2	 84.15 C5	 C3	 84.15
BOT	    3    4	 95.47 C4	 C5	 95.47
TOP	    4    3	 95.47 C5	 C4	 95.47
AVG	 0	 C1	  *	 87.64
AVG	 1	 C2	  *	 89.90
AVG	 2	 C3	  *	 89.93
AVG	 3	 C4	  *	 87.28
AVG	 4	 C5	  *	 86.89
TOT	 TOT	  *	 88.33
CLUSTAL W (1.83) multiple sequence alignment

C1              ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGACCATAGACAC
C2              ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGGCCATGGACAC
C3              ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGGCCATGGACAC
C4              ATGGAGGCAGCTATTCTGGACATAATCAGCGGGATCCTGGGCACGGACAC
C5              ATGGAGGCAGCTATTTTGGACATAATCAGCGGGATCCTGGGCATGGACAC
                *************** **** *******.**********. ** .*****

C1              GGAACGAATCCGTGAGTCCACAGCCAAGATGCTAAAGGCCTACGAGAATC
C2              GGACCGAATCCGTGAGTCCACAGACAAGATGTTAAAGGCCTATGAGAATC
C3              GGAACGAATCCGTGAGTCCACAGACAAGATGTTAAAGGCCTATGAGAATC
C4              GGAGCGGATTCGTCAGTCAACAGCCAAGATGATGAAGGCCTACGAGAATC
C5              GGAACGGATTCGTCAGTCAACAGCCAAGATGATGAAGGCCTACGAGAATC
                *** **.** *** ****.****.******* *.******** *******

C1              CCGATTCTCTGCTGGTTCTCACCCAGATCGTGATGTCGGACAGGCCGGTC
C2              CAGATTCTCTGCTGGTTCTCACCCAGATCATAATGTCGGACAGGCCGGTC
C3              CAGATTCTCTGCTGGTTCTCACCCAGATCATAATGTCGGACAGGCCGGTC
C4              CCGATTCTCTGCTGGTTCTCACCCAGATTGTGATGTCGGACAGGGCGGTC
C5              CCGATTCACTGCTGGTTCTCACCCAGATCGTGATGTCGGACCGGGCGGTC
                *.*****:******************** .*.*********.** *****

C1              CAAGAGCGGCAGGTCGCCGCCGTGCTCCTCAAGAGGCGGGTCAAAAAGTT
C2              CAGGAGCGGCAGGTCGCCGCCGTGCTCCTCAAAAGGCGGGTCAAAAAGTT
C3              CAGGAGCGGCAGGTCGCCGCCGTGCTCCTCAAAAGGCGGGTCAAAAAGTT
C4              CAGGAACGGCATATCGCCGCTATGCTTCTCAAGAAGCGGATCAGCAAGTT
C5              CAGGAGCGGCATGTCGCCGCCGTGCTCCTCAAGAGGCGGATCAGCAAGTT
                **.**.***** .******* .**** *****.*.****.***..*****

C1              ACGCCACTGGCAGTTGGTTCCCGCCGAGCACCAGGCAGCAATCAAATCGA
C2              GCGCCACTGGCAGTTGGTTCCCGCCGAGCACCAAGCAGCAATTAAATCGA
C3              GCGCCACTGGCAGTTGGTTCCCGCCGAGCACCAAGCAGTAATTAAATCGA
C4              GCGCCACTGGCAGTTGGTTCCCGCCGAGCATCAGGCCGCAATTAAAACGA
C5              GCGCCACTGGCAGTTGGTTCCCGCCGAGCATCAGTCAGCAATTAAAACGA
                .***************************** **. *.* *** ***:***

C1              ACATGCTACAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG
C2              ACATGCTGCAGGTCCTTATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG
C3              ACATGCTGCAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG
C4              ACATGCTTCAGGTCCTTATTGCGGTGAAGGAAAAGACGGTGAAGGGCACG
C5              ACATGCTTCAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG
                ******* ******** ** ***************** ************

C1              GTGGCCTTTATAATTGGATCGCTGGTGCGCCACGAGGAGGGCGAGCAAAA
C2              GTGGCCTTTATAATTGGATCGCTGGTTCGCCACGAGGAGGAAAAGCAAAA
C3              GTGGCCTTTATAATTGGATCGCTGGTGCGCCACGAGGAGGAAAAGCAAAA
C4              GTGGCCCAGATAATTGGATCGCTGGTGCGCCACGAGGCGGAAAAGGAACA
C5              GTAGCCCAGATAATTGGATCGCTGGTGCGACACGAGGCGGAGAAGGAACA
                **.*** : ***************** **.*******.**. .** **.*

C1              CTCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGCC
C2              CTCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC
C3              CCCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC
C4              TTCCTGGATGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC
C5              CTCCTGGTTGGAGGAAATACTGAAGTTCATTTACGAACGTTGCAGCAGTC
                  *****: ****************** ******************** *

C1              CCGATCCAATAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCTCGCTCATG
C2              CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCACGCTCATG
C3              CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCACGCTCATG
C4              CCGATCCAACAGAAAGCGAGCGCGGCAGCTCAATCTTTACCACGCTCATG
C5              CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTACCACACTCATG
                ********* ************ ***************:**:*.******

C1              GACGCTGCTCCCGATCAGTTTTCGGACCACACGGATACTATGTTCCCATT
C2              GACGCTGCTCCCGATCAGTTTTCGAACCACACGGATACTATCTTCCCGTT
C3              GACGCTGCTCCCGATCAGTTTTCGAACCACACGGATACTATCTTCCCGTT
C4              GACGCTGCTCCCGATCAGTTTTCGAACCACATGGATACTATCTTCCCGCT
C5              GACGCTGCTCCCGATCAGTTTTCGAACCACATGGATACTATCTTCCCGTT
                ************************.****** ********* *****. *

C1              GCTTGCCGGCATTCTAGTTACCGCCGAGGCGAATGGGAACATGGCCACAC
C2              GCTTGCCGGCACTCTAGTAACCGCCGAGGCGAATGGGAACATGGCCACAC
C3              GCTTGCCGGCACTCTAGTAACCGCCGAGGCGAATGGGAACATGGCCACAC
C4              GTTCGCCGGCGTTCTAGTAACCGCAGAGGCGAACGGTAACATGGCCACAC
C5              GTTCGCCGGCGTTCTGGTAACCGCCGAGGCGAACGGTAACATGGCCACAC
                * * ******. ***.**:*****.******** ** *************

C1              CCACCGTGCATAACATGCTGACCGGTTCATGCTTCTTGTTGCCTTTCGTA
C2              CCACCGTGCATAACATGCTGGCGGGTATATGCTTCCTGTTGCCTTTCGTC
C3              CCACCGTGCATAACATGCTGGCGGGTATATGCTTCCTGTTGCCTTTCGTC
C4              CCACCGTGTTTAACATGCTGGCGGGTACGTGCTACCTCCTGCCCTTCGTT
C5              CCACCGTGTTTAACGTGCTGACGGGTACGTGCTACCTCCTGCCCTTCGTC
                ******** :****.*****.* ***: .****:* *  **** ***** 

C1              AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT
C2              AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT
C3              AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT
C4              AGCGGTCATAGTGGTGCTGAGCAGATTGTGGTTAAGGCTATACCGCTAAT
C5              AGTGGACATAGTGGTGCTGAGCAGATTGTTGTTAAGGCTGTGCCGCTAAT
                ** **:******..*************** *********.*.*****.**

C1              ACTCAAGGCCCTGGCCGCCTTTGTCGAAAAGGGGTACAGTATTGAGTTCA
C2              TCTCAAGGCCCTGGGCGCCTTCGCCGAAAAGGGGGACAGTAATGAGTTTA
C3              TCTCAAGGCCCTGGGCGCCTTCGCCGAAAAGGGGGACAGTAATGAGTTCA
C4              TCTCAAGGCCCTAGGCGCCTTCGCCGAAAAGGGGGATAGTCAGGAGTTCA
C5              TCTCAAGGCCCTAGGCGCCTTCGCCGAAAAGGGGGACAGTCAGGAGTTCA
                :***********.* ****** * ********** * ***.: ***** *

C1              TGGGTGCCTTTGATATCATCGACAGCATGGCCGAGCATGTGCCCCACTTG
C2              TGGGTGCCTTTGATATCATGGACAGCATGGCCGAGTATGTGCCGCACTTG
C3              TGGGTGCCTTTGATATCATGGACAGCATGGCCGAGTATGTGCCGCACTTG
C4              TGGGTGCTTTTGATATCATAGACGCCATGGGCGAGTATGTGCCACACTTA
C5              TGGGAGCTTTTAATATCATAGACGCCATGGGCGAGTATGTGCCCCATTTG
                ****:** ***.******* ***. ***** **** ******* ** **.

C1              CTGACCGGTAATGTGAAGCTGCTTCTGGAGTTTTGTCTGATGATTGCGAG
C2              CTGACCGGCAATGTGAAGCTAATTCTGGAGTTTTGTCTGACGATTTCGAG
C3              CTGACCGGCAATGTGAAGCTAATTCTAGAGTTTTGTCTGACGATTGCGAG
C4              CTGACTGGTAATGTGAAGCTGATTTTGGAGTTTTGTCTGGTGATTGCGAG
C5              CTGACCGGTAATGTGAAGCTGATTCTGGAGTTCTGTCTGATAATTGCGAG
                ***** ** ***********..** *.***** ******. .*** ****

C1              AAACAAGCAGTTCGACGCTTCGATTCGGGTTCAGGTGCTTACCTTTGTAG
C2              AAACAAGCAGGTCGACGCTGCGATTCGGGTTCAGGTGATTACCTTTGTGG
C3              AAACAAGCAGGTCGACGCTGCGATTCGGGTTCAGGTGATTACCTTTGTGG
C4              CAATCAGCAGCTCGAGGATTCGATTCGAGTTCAGGTGATTACCTTTGTGG
C5              CAACCAGCAGCTCGAGGATTCGATTCGAGTTCAGGTGATTACCTTTGTTG
                .** .***** **** *.* *******.*********.********** *

C1              GCAGCCTAGTTCGCCTCAAGAAGAAAATTATTATGAAGCAGAAACTACTA
C2              GCAGCCTAATTCGCCTCAAGAAGAAGATTATTATGAAGCAGAAACTACTC
C3              GCAGCCTAATTCGCCTCAAGAAGAAGATTATTATGAAGCAGAAACTACTC
C4              GCAGCCTAATGCGCCTGAAAAAGAAGGTTATTATGAAGCAGAAGCTGCTG
C5              GCAGCCTAATGCGCCTTAAGAAGAAGGTTATTATGAAGCAGAAACTGCTG
                ********.* ***** **.*****..****************.**.** 

C1              CAGCCCACACTATCTGTTCTTTTCGAAGTGATTTGCCAGGACGACCTCGA
C2              CAGCCCACTCTATCGGTTATTTTCGAAGTGATTTGCCAGGACGTCCTTGA
C3              CAGCCCACTCTATCGGTTATCTTCGAAGTGATTTGCCAGGACGTCCTTGA
C4              GAGCCCACACTAGCGGTTATGTTCGAAGTGATGTGCCAGGACCCACTTGA
C5              GAACCCACTCTTGCGGTTATGTTCGAAGTGATGTGCCAGGACTCCCTTGA
                 *.*****:**: * ***.* *********** *********  .** **

C1              GGAAGGTGACGATGATTACTTTTCCTCGGAGAGCCTGAGTAGTCCATCCA
C2              CGATGGTTACGATGATTACTTTTCCTCGGAGAGCCTGAATAGCCCATCCA
C3              CGATGGTTACGATGATTACTTTTCCTCGGAGAGCCTGAATAGCCCATCCA
C4              TGACGGTTACGATGATTACTTTTCGTCAGAGAGCTCGAATAGCCCGTCCA
C5              TGATGGTTACGATGATTACTTTTCGTCTGAGAGCTCGAATAGCCCGTCCA
                 ** *** **************** ** ******  **.*** **.****

C1              ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC
C2              ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC
C3              ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC
C4              ATGCAGCTACGCAGACTCTGGACTTGATGGCCCTCCACATGGCGCCGGAG
C5              CTGCAGCTACGCAGACTCTGGACTTGATGGCCCTCCACATGTCGCCGGAG
                .*******.*******:****** ********** ******  ****** 

C1              AAGTTTATTCCGCCACTACTGGATTTGCTGGAGCCTGCGTTGCAGAGCCC
C2              AAGTTTATTCCGCCACTACTGGAATTGCTGGAGCCTGCGTTGCAGAGCCC
C3              AAGTTTATTCCGCCACTACTGGAATTGCTGGAGCCTGCGTTGCAGAGCCC
C4              AAGTTTATTCCGCCACTACTGCAGCTGCTGGAGCCTGCGTTGCAGAGCCC
C5              AAGTTTATTCCGCCACTACTGCAGCTGTTGGAGCCAGCGTTGCAGAGCCC
                ********************* *  ** *******:**************

C1              GGAACCTGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTTATTGCCG
C2              GGAACCTGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTCATTGCTG
C3              GGAACCCGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTCATTGCCG
C4              GCAGCCCGTGCTTCGTCGTTCCTCTTTTATTTGCATGGGAGTCATTGCCG
C5              ACAACCTGTGCTTCGCCGCTCCTCTTTTATTTGTATGGGCGTCATTGCCG
                . *.** ******** ** ************** *****.** ***** *

C1              AGGGCTGTTCCGAGGCCATTGGGAAAAAGTATCTCGAGGTCATGCTAAAT
C2              AGGGCTGCTCCGAGGCCATTGGGAAAAAGTATCTGCAGGTCATGCTAAAT
C3              AGGGCTGCTCCGAGGCCATTGGGAAAAAGTATCTGCAGGTCATGCTAAAT
C4              AGGGCTGCTCCGAGGCCATTGGGAACAAGTATCTGGAGGTCATGCTAAAT
C5              AGGGCTGCTCCGAGGCCATTGGGAACAAGTATCTGGAGGTCATGCTGAAT
                ******* *****************.********  **********.***

C1              ATCATCAAAGCTGGAGTGTTGGACTCTGTTATGTTCGTGCGGACCGCCGC
C2              ATCATCAAAGCTGGAGTTTTGGACTCTGTTATGTTGGTGCGGACCGCTGC
C3              ATCATCAAAGCTGGAGTTTTGGATTCTGTTATGTTGGTGCGGACCGCCGC
C4              ATTGTCAAAGCTGGAATTTTTGACTCTGTTATGTTGGTGCGGGTCGCCGC
C5              ATCGTCAAAGCTGGAATTTTCGACTCTGTTATGTTGGTGCGGGTCGCCGC
                ** .***********.* ** ** *********** ******. *** **

C1              ATTCTTCGCCCTCGGTCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA
C2              ATTCTTCGCCCTTGGCCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA
C3              ATTCTTCGCCCTCGGCCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA
C4              ATTCTTCGCTCTTGGACAGTTTTCCGAGTATCTTCAGCCCACAATCTGCA
C5              ATTCTTCGCCCTTGGACAGTTTTCCGAGTATCTTCAGCCGACAATCTGCA
                ********* ** ** *************:********* **.*******

C1              AGTTTGCTCCCCAAATTCTACCCGTGTTGTTCGACTATCTAAACCAGCTG
C2              AGTTTGCTCCTCAAATTCTTCCCGTGCTGTTTGACTATCTAAGCCAGCTG
C3              AGTTTGCTCCTCAAATTCTTCCCGTGCTGTTTGACTATCTAAGCCAGCTG
C4              AGTTTGCTCCCCAGATTCTTCCCGTGTTGTTCGATTATCTGAGCCAGCTG
C5              AGTATGCTCCCCAGATTCTTCCCGTGCTGTTCGACTATCTGAGCCAGCTG
                ***:****** **.*****:****** **** ** *****.*.*******

C1              GTACTGGAACTCAAGGTTGGTGAGCCGGATTCGAAACATATGGATCGTAT
C2              GTAATGGAACTCAAGATTGGTACGCCTAATCCGAAACATATGGATCGTAT
C3              GTAATGGAACTCAAGATTGGTACGCCTAATCCGAAACATATGGATCGTAT
C4              GTAATGGAACTCAAGATTGGTACGCCGGAACCGAAACACATGGATCGTAT
C5              GTAATGGAACTCAAGATTGGTACGCCGGAACCGAAACACATGGATCGTAT
                ***.***********.*****..*** .*: ******* ***********

C1              GTTTTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGATATTGTTC
C2              GTTCTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGAAATTGTTC
C3              GTTCTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGAAATTGTTC
C4              GTTCTATGCCTTGGAGACCTTTTGCGAGAACCTGGAGGACGACATCGTTC
C5              GTTCTATGCCTTGGAGACCTTTTGCGAGAATCTGGGGGATGACATTATTC
                *** ****** ******************* ****. ** ** ** .***

C1              CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG
C2              CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG
C3              CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG
C4              CCCATTTACCCACGCTGATGGATCGCCTGTTTGGGGTTCTGGAACCCCAG
C5              CCCATTTACCTACGCTGATGGAGCGTCTGTTTGGGGTTCTGGAACCCCAG
                *  ******* **.** ***** ** ************.******* ***

C1              AACTCAAATCAAATGCGTGAAATGGCTTTGTCGGCCATAGCAGCGGTGTC
C2              AACACGAATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTGTC
C3              AACACGAATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTGTC
C4              AACTCGTATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTCTC
C5              AACTCGCATCGAATGCGTGAAATGGGTTTGACGGCCATAGCAGCGGTCTC
                ***:*. ***.************** ****:**************** **

C1              AGCAGCAGCTAAGGAAAACCTGATGCCATATTTCCCCAGGATCATGACCG
C2              AACAGCAGCTAAGGAACACCTGATGCCATATTTCCCCAGGATCATGACCG
C3              AACAGCAGCTAAGGAACACCTGATGCCATATTTCCCCAGGATCATGACCG
C4              AACCGCAGCTAAGGTACACTTGATGCCCTATTTCCCCAGGATCATGAGCA
C5              AACCGCAGCTAAAGAACACCTGGTGCCCTATTTCCCTAGGATCATGAGTG
                *.*.********.*:*.** **.****.******** **********  .

C1              TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCAG
C2              TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCTC
C3              TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCTC
C4              TACTACAGGGCTGTCTGGTGAAGGAGTGCCCAAAGGAAATGCAAAGTCTG
C5              TACTACAGGGCTGTCTGGTGAAGGAGTGCCCAAAAGAAATGCAAAGTCTG
                ************************* ********.****** *.****: 

C1              CGCATCCAAGCTATCGACACTCTGGCCGCGCTGTGTCGCGAATTGGGCAA
C2              CGCATCCAAGCTATCGACACTCTGGCCGAGCTCTGTCGCGAAGTGGGCAA
C3              CGCATCCAAGCTATCGACACTCTGGCCGAGCTCTGTCGCGAAGTGGGCAA
C4              CGCATCCAAGCTATCGACACTCTGGCCGCGCTCTGTCGCGAAGTGGGCAA
C5              CGCATCCAAGCTATCGACACTCTGGCCGCGCTCTGTCGCGAAGTGGGCAG
                ****************************.*** ********* ******.

C1              GGATAATATTATTCCTCTTGCCGACGATACAATGAACTTCTGCCTGATGA
C2              AGATAATATTATTCCGCTTGCCGACGATACAATGAATTTCTGTCTGATGA
C3              AGATAATATTATTCCGCTTGCCGACGATACAATGAATTTCTGTCTGATGA
C4              GGATAATATTATTCCGCTTGCCGACGATACAATGAACTTCTGTCTGATGA
C5              GGATAATATTATTCCGCTTGCCGACGATACAATGAACTTCTGTCTGATGA
                .************** ******************** ***** *******

C1              TGCTGGAAGACGGTCCGGATGATCCCGAGTACCGCAGGAGTATATACAAC
C2              TGCTAGAAGATGGTCCGGATGATCCCGAGTTCCGCAGGAGTATATACAAC
C3              TGCTAGAAGATGGTCCGGATGATCCCGAGTTCCGCAGGAGTATATACAAC
C4              TGCTGGAAGATGGTCCGGACGATCCTGAGTTCCGCAGGAGCATCTACAAC
C5              TGTTGGAAGATGGTCCGGACGATCCCGAAGTCCGCAGGAGCATATACAAC
                ** *.***** ******** ***** **. :********* **.******

C1              CTGATGTCCTCCCTGTCATCAGTTGTCAACGAGAGCATGGCCAGTGTGTT
C2              CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCAGTGTGTT
C3              CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCAGTGTGTT
C4              CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCTCTGTGTT
C5              CTGATGTCCTCCCTGTCATCAGTTGTCAAAGAGAGCATGGCCACTGTGTT
                ********************.********.************: ******

C1              CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTTTTCGGAGGACA
C2              CCCCAAGTTCATTGATCGCATAATGGAATCTGTGATTTCATCGGAGGACA
C3              CCCCAAGTTCATTGATCGCATAATGGAATCTGTGATTTCTTCGGAGGACA
C4              CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTCTTCGGAGGACG
C5              CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTCTTCGGAGGACG
                ***************************.********** :*********.

C1              TGGTGCCAAATGTGTCGGACAATGCGGACGATGATTTGGCCCTAGTAGAT
C2              TGGTGCCAAATGTGTCGGACAATGCGGAGGATGATTTGGCCCTAGAAGAT
C3              TGGTGCCAAATGTGTCGGACAATGCGGAGGATGATTTGGCTTTAGAAGAT
C4              TGTTGCCACATGTTTCGGACAATGCGGAGGAAGATTTGATCCTG---GAT
C5              TGTTGCCAAATGTGTCAGAGAATCCAGAGGATGATTTGATCCTG---GAT
                ** *****.**** **.** *** *.** **:******.   *.   ***

C1              GCCCCCGACATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA
C2              GCCGCCAATATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA
C3              GCCGCCAATATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA
C4              ACGACCGATGTAGAGATTGATTTAGATCAAACAGACGACGAAGACGACCA
C5              ACAACCGATGTAGAGATTGATTTAGATCAAACAGATGACGAAGATGACCA
                .*  **.* .**************** **.***** ******** *****

C1              AGACGCTTACCCGGTGGAGAATGATTATATCGTCGAAAAGGAGGAGGCCA
C2              AGACGCTTACCTGGTGGAGAATGATTATATCATTGAAAAGGAGGAGGCCA
C3              AGACGCTTACCTGGTGGAGAATGATTATATCATTGAAAAGGAGGAGGCCA
C4              AGACGGCTACCAGGTGGAGAATGATTACGTTATTGAGAAGGAGGAGGCTA
C5              AGACTGCTACCAGGTGGAGAACGATTACGTTTTTGAGAAGGAGGAGGCTA
                ****   **** ********* ***** .*  * **.*********** *

C1              TTCTGTCACTCAAGGAGTTTGCTACCCATACCGGCGCCGCCTTCGCGCCC
C2              TTATGTCACTCAAGGAGTTTGCTACCCATACGGGCGCCGCCTTTGCGCCC
C3              TTATGTCACTCAAGGAGTTTGCTACCCATACGGGCGCCGCCTTTGCGCCC
C4              TTATGGCACTTAAGGAGTTTGCTGCACACACGGGCGCCGCCTTTGCACCC
C5              TTCTGGCACTTAGGGAGTTCGCTGCACATACGGGCGCCGCCTTCGCGCCC
                **.** **** *.****** ***.*.** ** *********** **.***

C1              TATTTGCAATCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
C2              TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
C3              TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
C4              TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
C5              TACTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
                ** *****.*****************************************

C1              AGGCGACGTTCGTATGGCATGTATTGACTCCATTTGCTCGTTCATTACGG
C2              GAGCGACGTTCGTATGGCGTGCATTGACTCCATCTGCGCGTTCATTACGG
C3              GAGCGACGTTCGTATGGCGTGCATTGACTCCATCTGCGCGTTCATTACGG
C4              GGACGACGTCCGTAAGGCGTGCATTGACGCCATTTGCGGATTCATTGTGG
C5              GGGCGACGTCCGTAAGGCGTGCATTGACGCCATTTGCGGGTTCATTACGG
                ...****** ****:***.** ****** **** ***  .******. **

C1              CTCTCCACAAGTTGGATGATGCCGCCGGCCTGAAGCGCGCCTGCGAGATT
C2              CTCTCCACAAGTTGGATGATGCCGTCGGCCTGAAACGCGCCTGCGAGATT
C3              CTCTCCACAAGTTGAATGATGCCGTCGGCCTGAAGCGCGCCTGCGAGATT
C4              CTCTCTACAAGTTGGGAGATGCCGCCGGCTTGAAGCGCGCCTGCGAGATT
C5              CTCTCCATAAGTTGGAAGATGCCGCCGGCTTGAAGCGCGCCTGCGAGATT
                ***** * ******..:******* **** ****.***************

C1              GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGCGGT
C2              GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGGGGT
C3              GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGGGGT
C4              GCCATTCCAAAGTTTGCACATATGATGCGCACTGACGACGAGGTTGGGGT
C5              GCCATTCCAAAGTTTGCACATATGTTGCGCACTGACGACGAGGTTGGGGT
                ***********************.:******* ****** ****** ***

C1              CGTACTCCGCATGCTTGACGTCCTCTACGATGTCTTCAAGTACGTGCCG-
C2              CGTAAACCACTTGCTTGACGCCCTCTACGATGTCTTCAAGAACGTGCCG-
C3              CGTAAACCACTTGCTTGACGTCCTCTACGATGTCTTCAAGAACGTGCCG-
C4              CGTACTCCATCTGCTTGACGTACTCGGCGATGTCTTCAAGGATGTCCAGT
C5              CGTACTCCATCTGCTTGACGAACTCGGCGATGTCTTCAAGGATGTCCAGT
                ****.:**.  ********* .*** .************* * ** *.* 

C1              -----GCGATAAACAGCCAGGAGCACGCCGAACTTATATTCGGTTGCATC
C2              -----GCGATAAACAGCCAAGAGCACGCCGAACTAATTTTCGCTTGCATC
C3              -----GCGATTAATAGCCAAGAGCACGCCGAACTAATTTTCGCTTGCATC
C4              TGCAGGCAATAAACAACCAGGAGCACGCCGAACTAATTTTCGGATGCATT
C5              TGCAGGCAATAAACAACCAGGAGCATGCCGAACTAATTTTCGGGTGCATC
                     **.**:** *.***.***** ********:**:****  ***** 

C1              AGGGACATCTTCACAAATAAAATGGCCTGTCAGTTTAACGAGGAGAGCGG
C2              AGGGACATTTTCACAAATGAAATGGCCTGCCAGTTTAACGAGGAGAGCGG
C3              AGGGACATTTTCACAAATGAAATGGCCTGCCAGTTTAACGAGGAGAGCGG
C4              CGGGACGTCTTCACAAATAAGATGGCCTGTCAGTTTAACGAAGAGAGCGG
C5              CGCGACGTCTTCACAAATAAAATGGCCTGTCAGTTTAACGAGGAGAGCGG
                .* ***.* *********.*.******** ***********.********

C1              CGGCGGAGATGATGAGTGTTCGGAGGAAAGCGAGAACGACGAGATGCTGT
C2              CGGCGGAGATGATGAGTATCCGGAGGAAAGCGAGAACGAAGAGATGCTGT
C3              CGGCGGAGATGATGAGTATCCGGAGGAAAGCGAGAACGAAGAGATGCTGT
C4              CGGTGGAGATGAGGAGGACTCGGAGGAAAGCGAGAACGACGAGATGCTGT
C5              TGGTGGAGATGAGGAGGATTCGGAGGAAAGCGAGAACGACGAAATGCTGT
                 ** ******** *** .  *******************.**.*******

C1              TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCCTTCAGCCG
C2              TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCATTCAGCCG
C3              TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCATTCAGCCG
C4              TCGAGAACGCTGCCAATCTGTTCCCCTTGTTTGGCTTGGCCCTTCAGCCG
C5              TCGAGAACGCTGCCAATCTGTTCCCTTTGTTTGGCTTAGCCCTTCAGCCG
                ************************* :**********..**.********

C1              GAGCTGTTCTCGCTTTATTTTGGACGCCTTTACCATTTCTATATTCAAAG
C2              GAGCTGTTCTCGCTTTATTTCGGACGCCTTTACCATTTCTATATTCAAAG
C3              GAGCTGTTCTCGCTTTATTTCGGACGCCTTTACCATTTCTATATTCAAAG
C4              GAGTTGTTCTCTCTTTATTTCGGACGCCTTTACCAATTTTATGTTCAAAG
C5              GAGTTGTTCTCGCTTTATTTCGGTCGTCTTTACCAATTTTATGTTCAAAG
                *** ******* ******** **:** ********:** ***.*******

C1              GCTGGCGAAGGTAAAGGAGCGCGATTTACCAGAACAGCGGGCATACATCT
C2              GCTGGCGAAGGTAAAGGACTTCGATTTACCAGAAGGACGGGCGTTCGTCT
C3              GCTGGCGAAGGTAAAGGACTTCGATTTACCAGAAGGGCGGGCGTTCGTCT
C4              GCTGGCGAAGGCAAAGGAGCGCGATATTCCAGAACATCGGGCTTACATCT
C5              GCTGGCCAAGGCAAAGGAGCGCGATATCCCAGAACATCGGGCTTACATCT
                ****** **** ******   ****:* ****** . ***** *:*.***

C1              ATGGCGCACTTGCTGACTGCTGCAAGGCGTTAAAAGGTTGCTGTGCTACT
C2              ATGGCGCACTGGCTGACTGCTGCAGGGCGCTAAAAGGATGCTGTGCTACT
C3              ATGGCGCACTGGCTGACTGCTGCAGGGCGCTAAAGGGATGCTGTGCTACT
C4              ATGGCGCATTGGCTGACTCCTTCAAGGCGCTGAAGGGATGCTCTGCTACT
C5              ATGGCGCTTTGGCTGACTCCTTCAAGGCGCTGAAGGGATGCTCTGCAACA
                *******: * ******* ** **.**** *.**.**:**** ***:**:

C1              TATTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAGGGATTCTGA
C2              TACTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAAGGATTCTGA
C3              TACTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAAGGATTCTGA
C4              TACTTTGACGGCCTGTGCCCCCTTTTTATCACCGGAACCAAGGATTCTGA
C5              TACTTCGACGCCCTGTGCCCCATTTTTATCACTGGCTCCAAGGATTCTGA
                ** ** ** * ***. * ***.********.* ** :***.*********

C1              TGCCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC
C2              TGGCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC
C3              TGGCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC
C4              TGCCAAATCGCGACAGAACTCCTATTATGCACTAGGCGAACTGGTCATCC
C5              TGCCAAATCGCGACAGAACTCCTATTATGCACTAGGCGAACTGGTCATCC
                ** **** ******************:*************.* ***:***

C1              ATTCCGAGGAAAAATCATTCGAGTCTTATCCGACAATTTTGCAAGCCCTT
C2              ATTCCGAGGAAAAATCATTAGAGTCTTATCCGACAATTTTGCAAGCCCTT
C3              ATTCCGAGGAAAAATCATTACAGTCTTATCCGACAATTTTGCAAGCCCTT
C4              ATTCCGAGGAAAAATCATTCGAGTCGTATCCGGCAATTCTGCAAGCCCTT
C5              ATTCCGAGGAGAAATCATTCGAGTCTTATCCGGTAATTTTGCAAGCTCTT
                **********.********. **** ******. **** ******* ***

C1              TCCGAAGCAATTGTCAGGGAATCCGTTCCTGCCGCCATGGACAACATTTG
C2              TCCGAAGCAATTGTCAGGGAATCCGTTCCCGCCGCCATGGACAACATTTG
C3              TCCGAAGCAATTGTCAGGGAATCCGTTCCCGCCGCCATGGACAACATTTG
C4              TCCGAAGCAATTGTCAGGGAGTCCCATCCCGCCGCCCTGGACAACATTTG
C5              TCCGAAGCAATTGTCAGGGAGTCCAATCCCCCCGCCTTGGACAACATTTG
                ********************.*** :***  ***** *************

C1              CGGAGCAGTTGCTCGTCTCATAGTTACCAACCCAGATTCAGTGCCGCTTG
C2              CGGAGCAGTTGCTCGGCTCATAGTTACCGACCTAGATTCAGTGCCGCTTG
C3              CGGAGCAGTTGCTCGGCTCATAGTTACCGACCTAGATTCAGTGCCGCTTG
C4              CGGAGCAGTTGCTCGCCTTATAGTTACCAACCCGGATTCAGTGCCGCTTG
C5              CGGAGCAGTTGCTCGCCTCATAGTTACCAACCCTGATTCAGTGCCGCTTG
                *************** ** *********.***  ****************

C1              GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGATGACACC
C2              GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGAGGACACC
C3              GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGAGGACACC
C4              CCCAGGTGCTGCCCGTGCTGCTCAACCATTTGCCCCTTAAGGAGGACGTA
C5              CCCAGGTGTTGCCCGTGTTGCTCAATCATTTGCCACTGAAGGAGGACGTC
                 ******* ********  ****** ********.** ***** ***. .

C1              GTGGAGAACGATGTGATTCAGAAGGCGTTCCGTGTGCTATACTTGAAGGC
C2              GTGGAGAACGATGTGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC
C3              GTGGAGAACGATGTGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC
C4              GTGGAGAACGATATGATTCAGAAGGCGTTCCGCGTTCTATACGTAAAGGC
C5              ATTGAAAACGATATGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC
                .* **.******.******************* ** ****** *.*****

C1              CCGCCCCAGCATTGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG
C2              CCGCCCCAGCATAGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG
C3              CCGCCCCAGCATAGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG
C4              TCGCCCCAGCATTGTTGCACATCTCGAGCAAATCCTGGTCATTACCATAG
C5              TCGCCCCAGCATTGTTGCACATCTCGAGCAAATCCTGGTCATCACCATAG
                 ***********:*: ******** ************* *** *******

C1              AGGCGAGTTACAAGAGACAGATGCCTGACGTCGAGACAACCGAGAGCGCG
C2              AGTCGAGTTACAAGAAACAGATGCCTGACGTCGAGACAACCCAGAGCGCG
C3              AGTCGAGTTACAAGAAACAGATGCCTGACGTCGAGACAACACAGAGCGCT
C4              AGGCGATTTACAAGAAACAGATGCCAGACGACGAGACAACCGAGAGCGCA
C5              AGGCGATTTACAAGAAACAGATGCCAGACGACGAGACAACCGAGAGCGCG
                ** *** ********.*********:****:*********. ******* 

C1              GTGGCCCTCATCAAAGAGATTCGCGCCAACTACCCGGAACTGTTCAGCAA
C2              GTGGCCCTCATCAAAGAGATTAGCGCCAAATACCCGGAACTGTTTAACAA
C3              GTGGCCCTCATCAAGGAGATTAGCGCCAACTACCCGGAACTGTTTAACAA
C4              GTGGCCCTCATCAAAGAGATTCGCGCCAATTACCCGGAACAGTTTAACCA
C5              GTGGCCCTCATCAAAGAGATTCGCGCCAATTACCCGGAACAGTTTAACCA
                **************.******.******* **********:*** *.*.*

C1              AGTATCGAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG---
C2              AGTATCAAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG---
C3              AGTATCGAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG---
C4              AGTATCAAACGCGAATCCGGAAGTGTTTAATTATGTGCAAACTCTG---
C5              AGTATCAAACGCGAATCCGGAAGTTTTCAATTATGTGCAAACTCTG---
                ******.***. ******.***** ** ************.* ***   



>C1
ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGACCATAGACAC
GGAACGAATCCGTGAGTCCACAGCCAAGATGCTAAAGGCCTACGAGAATC
CCGATTCTCTGCTGGTTCTCACCCAGATCGTGATGTCGGACAGGCCGGTC
CAAGAGCGGCAGGTCGCCGCCGTGCTCCTCAAGAGGCGGGTCAAAAAGTT
ACGCCACTGGCAGTTGGTTCCCGCCGAGCACCAGGCAGCAATCAAATCGA
ACATGCTACAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG
GTGGCCTTTATAATTGGATCGCTGGTGCGCCACGAGGAGGGCGAGCAAAA
CTCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGCC
CCGATCCAATAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCTCGCTCATG
GACGCTGCTCCCGATCAGTTTTCGGACCACACGGATACTATGTTCCCATT
GCTTGCCGGCATTCTAGTTACCGCCGAGGCGAATGGGAACATGGCCACAC
CCACCGTGCATAACATGCTGACCGGTTCATGCTTCTTGTTGCCTTTCGTA
AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT
ACTCAAGGCCCTGGCCGCCTTTGTCGAAAAGGGGTACAGTATTGAGTTCA
TGGGTGCCTTTGATATCATCGACAGCATGGCCGAGCATGTGCCCCACTTG
CTGACCGGTAATGTGAAGCTGCTTCTGGAGTTTTGTCTGATGATTGCGAG
AAACAAGCAGTTCGACGCTTCGATTCGGGTTCAGGTGCTTACCTTTGTAG
GCAGCCTAGTTCGCCTCAAGAAGAAAATTATTATGAAGCAGAAACTACTA
CAGCCCACACTATCTGTTCTTTTCGAAGTGATTTGCCAGGACGACCTCGA
GGAAGGTGACGATGATTACTTTTCCTCGGAGAGCCTGAGTAGTCCATCCA
ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC
AAGTTTATTCCGCCACTACTGGATTTGCTGGAGCCTGCGTTGCAGAGCCC
GGAACCTGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTTATTGCCG
AGGGCTGTTCCGAGGCCATTGGGAAAAAGTATCTCGAGGTCATGCTAAAT
ATCATCAAAGCTGGAGTGTTGGACTCTGTTATGTTCGTGCGGACCGCCGC
ATTCTTCGCCCTCGGTCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA
AGTTTGCTCCCCAAATTCTACCCGTGTTGTTCGACTATCTAAACCAGCTG
GTACTGGAACTCAAGGTTGGTGAGCCGGATTCGAAACATATGGATCGTAT
GTTTTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGATATTGTTC
CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG
AACTCAAATCAAATGCGTGAAATGGCTTTGTCGGCCATAGCAGCGGTGTC
AGCAGCAGCTAAGGAAAACCTGATGCCATATTTCCCCAGGATCATGACCG
TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCAG
CGCATCCAAGCTATCGACACTCTGGCCGCGCTGTGTCGCGAATTGGGCAA
GGATAATATTATTCCTCTTGCCGACGATACAATGAACTTCTGCCTGATGA
TGCTGGAAGACGGTCCGGATGATCCCGAGTACCGCAGGAGTATATACAAC
CTGATGTCCTCCCTGTCATCAGTTGTCAACGAGAGCATGGCCAGTGTGTT
CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTTTTCGGAGGACA
TGGTGCCAAATGTGTCGGACAATGCGGACGATGATTTGGCCCTAGTAGAT
GCCCCCGACATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA
AGACGCTTACCCGGTGGAGAATGATTATATCGTCGAAAAGGAGGAGGCCA
TTCTGTCACTCAAGGAGTTTGCTACCCATACCGGCGCCGCCTTCGCGCCC
TATTTGCAATCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
AGGCGACGTTCGTATGGCATGTATTGACTCCATTTGCTCGTTCATTACGG
CTCTCCACAAGTTGGATGATGCCGCCGGCCTGAAGCGCGCCTGCGAGATT
GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGCGGT
CGTACTCCGCATGCTTGACGTCCTCTACGATGTCTTCAAGTACGTGCCG-
-----GCGATAAACAGCCAGGAGCACGCCGAACTTATATTCGGTTGCATC
AGGGACATCTTCACAAATAAAATGGCCTGTCAGTTTAACGAGGAGAGCGG
CGGCGGAGATGATGAGTGTTCGGAGGAAAGCGAGAACGACGAGATGCTGT
TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCCTTCAGCCG
GAGCTGTTCTCGCTTTATTTTGGACGCCTTTACCATTTCTATATTCAAAG
GCTGGCGAAGGTAAAGGAGCGCGATTTACCAGAACAGCGGGCATACATCT
ATGGCGCACTTGCTGACTGCTGCAAGGCGTTAAAAGGTTGCTGTGCTACT
TATTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAGGGATTCTGA
TGCCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC
ATTCCGAGGAAAAATCATTCGAGTCTTATCCGACAATTTTGCAAGCCCTT
TCCGAAGCAATTGTCAGGGAATCCGTTCCTGCCGCCATGGACAACATTTG
CGGAGCAGTTGCTCGTCTCATAGTTACCAACCCAGATTCAGTGCCGCTTG
GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGATGACACC
GTGGAGAACGATGTGATTCAGAAGGCGTTCCGTGTGCTATACTTGAAGGC
CCGCCCCAGCATTGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG
AGGCGAGTTACAAGAGACAGATGCCTGACGTCGAGACAACCGAGAGCGCG
GTGGCCCTCATCAAAGAGATTCGCGCCAACTACCCGGAACTGTTCAGCAA
AGTATCGAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG---
>C2
ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGGCCATGGACAC
GGACCGAATCCGTGAGTCCACAGACAAGATGTTAAAGGCCTATGAGAATC
CAGATTCTCTGCTGGTTCTCACCCAGATCATAATGTCGGACAGGCCGGTC
CAGGAGCGGCAGGTCGCCGCCGTGCTCCTCAAAAGGCGGGTCAAAAAGTT
GCGCCACTGGCAGTTGGTTCCCGCCGAGCACCAAGCAGCAATTAAATCGA
ACATGCTGCAGGTCCTTATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG
GTGGCCTTTATAATTGGATCGCTGGTTCGCCACGAGGAGGAAAAGCAAAA
CTCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC
CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCACGCTCATG
GACGCTGCTCCCGATCAGTTTTCGAACCACACGGATACTATCTTCCCGTT
GCTTGCCGGCACTCTAGTAACCGCCGAGGCGAATGGGAACATGGCCACAC
CCACCGTGCATAACATGCTGGCGGGTATATGCTTCCTGTTGCCTTTCGTC
AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT
TCTCAAGGCCCTGGGCGCCTTCGCCGAAAAGGGGGACAGTAATGAGTTTA
TGGGTGCCTTTGATATCATGGACAGCATGGCCGAGTATGTGCCGCACTTG
CTGACCGGCAATGTGAAGCTAATTCTGGAGTTTTGTCTGACGATTTCGAG
AAACAAGCAGGTCGACGCTGCGATTCGGGTTCAGGTGATTACCTTTGTGG
GCAGCCTAATTCGCCTCAAGAAGAAGATTATTATGAAGCAGAAACTACTC
CAGCCCACTCTATCGGTTATTTTCGAAGTGATTTGCCAGGACGTCCTTGA
CGATGGTTACGATGATTACTTTTCCTCGGAGAGCCTGAATAGCCCATCCA
ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC
AAGTTTATTCCGCCACTACTGGAATTGCTGGAGCCTGCGTTGCAGAGCCC
GGAACCTGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTCATTGCTG
AGGGCTGCTCCGAGGCCATTGGGAAAAAGTATCTGCAGGTCATGCTAAAT
ATCATCAAAGCTGGAGTTTTGGACTCTGTTATGTTGGTGCGGACCGCTGC
ATTCTTCGCCCTTGGCCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA
AGTTTGCTCCTCAAATTCTTCCCGTGCTGTTTGACTATCTAAGCCAGCTG
GTAATGGAACTCAAGATTGGTACGCCTAATCCGAAACATATGGATCGTAT
GTTCTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGAAATTGTTC
CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG
AACACGAATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTGTC
AACAGCAGCTAAGGAACACCTGATGCCATATTTCCCCAGGATCATGACCG
TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCTC
CGCATCCAAGCTATCGACACTCTGGCCGAGCTCTGTCGCGAAGTGGGCAA
AGATAATATTATTCCGCTTGCCGACGATACAATGAATTTCTGTCTGATGA
TGCTAGAAGATGGTCCGGATGATCCCGAGTTCCGCAGGAGTATATACAAC
CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCAGTGTGTT
CCCCAAGTTCATTGATCGCATAATGGAATCTGTGATTTCATCGGAGGACA
TGGTGCCAAATGTGTCGGACAATGCGGAGGATGATTTGGCCCTAGAAGAT
GCCGCCAATATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA
AGACGCTTACCTGGTGGAGAATGATTATATCATTGAAAAGGAGGAGGCCA
TTATGTCACTCAAGGAGTTTGCTACCCATACGGGCGCCGCCTTTGCGCCC
TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
GAGCGACGTTCGTATGGCGTGCATTGACTCCATCTGCGCGTTCATTACGG
CTCTCCACAAGTTGGATGATGCCGTCGGCCTGAAACGCGCCTGCGAGATT
GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGGGGT
CGTAAACCACTTGCTTGACGCCCTCTACGATGTCTTCAAGAACGTGCCG-
-----GCGATAAACAGCCAAGAGCACGCCGAACTAATTTTCGCTTGCATC
AGGGACATTTTCACAAATGAAATGGCCTGCCAGTTTAACGAGGAGAGCGG
CGGCGGAGATGATGAGTATCCGGAGGAAAGCGAGAACGAAGAGATGCTGT
TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCATTCAGCCG
GAGCTGTTCTCGCTTTATTTCGGACGCCTTTACCATTTCTATATTCAAAG
GCTGGCGAAGGTAAAGGACTTCGATTTACCAGAAGGACGGGCGTTCGTCT
ATGGCGCACTGGCTGACTGCTGCAGGGCGCTAAAAGGATGCTGTGCTACT
TACTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAAGGATTCTGA
TGGCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC
ATTCCGAGGAAAAATCATTAGAGTCTTATCCGACAATTTTGCAAGCCCTT
TCCGAAGCAATTGTCAGGGAATCCGTTCCCGCCGCCATGGACAACATTTG
CGGAGCAGTTGCTCGGCTCATAGTTACCGACCTAGATTCAGTGCCGCTTG
GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGAGGACACC
GTGGAGAACGATGTGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC
CCGCCCCAGCATAGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG
AGTCGAGTTACAAGAAACAGATGCCTGACGTCGAGACAACCCAGAGCGCG
GTGGCCCTCATCAAAGAGATTAGCGCCAAATACCCGGAACTGTTTAACAA
AGTATCAAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG---
>C3
ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGGCCATGGACAC
GGAACGAATCCGTGAGTCCACAGACAAGATGTTAAAGGCCTATGAGAATC
CAGATTCTCTGCTGGTTCTCACCCAGATCATAATGTCGGACAGGCCGGTC
CAGGAGCGGCAGGTCGCCGCCGTGCTCCTCAAAAGGCGGGTCAAAAAGTT
GCGCCACTGGCAGTTGGTTCCCGCCGAGCACCAAGCAGTAATTAAATCGA
ACATGCTGCAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG
GTGGCCTTTATAATTGGATCGCTGGTGCGCCACGAGGAGGAAAAGCAAAA
CCCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC
CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCACGCTCATG
GACGCTGCTCCCGATCAGTTTTCGAACCACACGGATACTATCTTCCCGTT
GCTTGCCGGCACTCTAGTAACCGCCGAGGCGAATGGGAACATGGCCACAC
CCACCGTGCATAACATGCTGGCGGGTATATGCTTCCTGTTGCCTTTCGTC
AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT
TCTCAAGGCCCTGGGCGCCTTCGCCGAAAAGGGGGACAGTAATGAGTTCA
TGGGTGCCTTTGATATCATGGACAGCATGGCCGAGTATGTGCCGCACTTG
CTGACCGGCAATGTGAAGCTAATTCTAGAGTTTTGTCTGACGATTGCGAG
AAACAAGCAGGTCGACGCTGCGATTCGGGTTCAGGTGATTACCTTTGTGG
GCAGCCTAATTCGCCTCAAGAAGAAGATTATTATGAAGCAGAAACTACTC
CAGCCCACTCTATCGGTTATCTTCGAAGTGATTTGCCAGGACGTCCTTGA
CGATGGTTACGATGATTACTTTTCCTCGGAGAGCCTGAATAGCCCATCCA
ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC
AAGTTTATTCCGCCACTACTGGAATTGCTGGAGCCTGCGTTGCAGAGCCC
GGAACCCGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTCATTGCCG
AGGGCTGCTCCGAGGCCATTGGGAAAAAGTATCTGCAGGTCATGCTAAAT
ATCATCAAAGCTGGAGTTTTGGATTCTGTTATGTTGGTGCGGACCGCCGC
ATTCTTCGCCCTCGGCCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA
AGTTTGCTCCTCAAATTCTTCCCGTGCTGTTTGACTATCTAAGCCAGCTG
GTAATGGAACTCAAGATTGGTACGCCTAATCCGAAACATATGGATCGTAT
GTTCTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGAAATTGTTC
CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG
AACACGAATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTGTC
AACAGCAGCTAAGGAACACCTGATGCCATATTTCCCCAGGATCATGACCG
TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCTC
CGCATCCAAGCTATCGACACTCTGGCCGAGCTCTGTCGCGAAGTGGGCAA
AGATAATATTATTCCGCTTGCCGACGATACAATGAATTTCTGTCTGATGA
TGCTAGAAGATGGTCCGGATGATCCCGAGTTCCGCAGGAGTATATACAAC
CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCAGTGTGTT
CCCCAAGTTCATTGATCGCATAATGGAATCTGTGATTTCTTCGGAGGACA
TGGTGCCAAATGTGTCGGACAATGCGGAGGATGATTTGGCTTTAGAAGAT
GCCGCCAATATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA
AGACGCTTACCTGGTGGAGAATGATTATATCATTGAAAAGGAGGAGGCCA
TTATGTCACTCAAGGAGTTTGCTACCCATACGGGCGCCGCCTTTGCGCCC
TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
GAGCGACGTTCGTATGGCGTGCATTGACTCCATCTGCGCGTTCATTACGG
CTCTCCACAAGTTGAATGATGCCGTCGGCCTGAAGCGCGCCTGCGAGATT
GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGGGGT
CGTAAACCACTTGCTTGACGTCCTCTACGATGTCTTCAAGAACGTGCCG-
-----GCGATTAATAGCCAAGAGCACGCCGAACTAATTTTCGCTTGCATC
AGGGACATTTTCACAAATGAAATGGCCTGCCAGTTTAACGAGGAGAGCGG
CGGCGGAGATGATGAGTATCCGGAGGAAAGCGAGAACGAAGAGATGCTGT
TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCATTCAGCCG
GAGCTGTTCTCGCTTTATTTCGGACGCCTTTACCATTTCTATATTCAAAG
GCTGGCGAAGGTAAAGGACTTCGATTTACCAGAAGGGCGGGCGTTCGTCT
ATGGCGCACTGGCTGACTGCTGCAGGGCGCTAAAGGGATGCTGTGCTACT
TACTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAAGGATTCTGA
TGGCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC
ATTCCGAGGAAAAATCATTACAGTCTTATCCGACAATTTTGCAAGCCCTT
TCCGAAGCAATTGTCAGGGAATCCGTTCCCGCCGCCATGGACAACATTTG
CGGAGCAGTTGCTCGGCTCATAGTTACCGACCTAGATTCAGTGCCGCTTG
GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGAGGACACC
GTGGAGAACGATGTGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC
CCGCCCCAGCATAGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG
AGTCGAGTTACAAGAAACAGATGCCTGACGTCGAGACAACACAGAGCGCT
GTGGCCCTCATCAAGGAGATTAGCGCCAACTACCCGGAACTGTTTAACAA
AGTATCGAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG---
>C4
ATGGAGGCAGCTATTCTGGACATAATCAGCGGGATCCTGGGCACGGACAC
GGAGCGGATTCGTCAGTCAACAGCCAAGATGATGAAGGCCTACGAGAATC
CCGATTCTCTGCTGGTTCTCACCCAGATTGTGATGTCGGACAGGGCGGTC
CAGGAACGGCATATCGCCGCTATGCTTCTCAAGAAGCGGATCAGCAAGTT
GCGCCACTGGCAGTTGGTTCCCGCCGAGCATCAGGCCGCAATTAAAACGA
ACATGCTTCAGGTCCTTATTGCGGTGAAGGAAAAGACGGTGAAGGGCACG
GTGGCCCAGATAATTGGATCGCTGGTGCGCCACGAGGCGGAAAAGGAACA
TTCCTGGATGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC
CCGATCCAACAGAAAGCGAGCGCGGCAGCTCAATCTTTACCACGCTCATG
GACGCTGCTCCCGATCAGTTTTCGAACCACATGGATACTATCTTCCCGCT
GTTCGCCGGCGTTCTAGTAACCGCAGAGGCGAACGGTAACATGGCCACAC
CCACCGTGTTTAACATGCTGGCGGGTACGTGCTACCTCCTGCCCTTCGTT
AGCGGTCATAGTGGTGCTGAGCAGATTGTGGTTAAGGCTATACCGCTAAT
TCTCAAGGCCCTAGGCGCCTTCGCCGAAAAGGGGGATAGTCAGGAGTTCA
TGGGTGCTTTTGATATCATAGACGCCATGGGCGAGTATGTGCCACACTTA
CTGACTGGTAATGTGAAGCTGATTTTGGAGTTTTGTCTGGTGATTGCGAG
CAATCAGCAGCTCGAGGATTCGATTCGAGTTCAGGTGATTACCTTTGTGG
GCAGCCTAATGCGCCTGAAAAAGAAGGTTATTATGAAGCAGAAGCTGCTG
GAGCCCACACTAGCGGTTATGTTCGAAGTGATGTGCCAGGACCCACTTGA
TGACGGTTACGATGATTACTTTTCGTCAGAGAGCTCGAATAGCCCGTCCA
ATGCAGCTACGCAGACTCTGGACTTGATGGCCCTCCACATGGCGCCGGAG
AAGTTTATTCCGCCACTACTGCAGCTGCTGGAGCCTGCGTTGCAGAGCCC
GCAGCCCGTGCTTCGTCGTTCCTCTTTTATTTGCATGGGAGTCATTGCCG
AGGGCTGCTCCGAGGCCATTGGGAACAAGTATCTGGAGGTCATGCTAAAT
ATTGTCAAAGCTGGAATTTTTGACTCTGTTATGTTGGTGCGGGTCGCCGC
ATTCTTCGCTCTTGGACAGTTTTCCGAGTATCTTCAGCCCACAATCTGCA
AGTTTGCTCCCCAGATTCTTCCCGTGTTGTTCGATTATCTGAGCCAGCTG
GTAATGGAACTCAAGATTGGTACGCCGGAACCGAAACACATGGATCGTAT
GTTCTATGCCTTGGAGACCTTTTGCGAGAACCTGGAGGACGACATCGTTC
CCCATTTACCCACGCTGATGGATCGCCTGTTTGGGGTTCTGGAACCCCAG
AACTCGTATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTCTC
AACCGCAGCTAAGGTACACTTGATGCCCTATTTCCCCAGGATCATGAGCA
TACTACAGGGCTGTCTGGTGAAGGAGTGCCCAAAGGAAATGCAAAGTCTG
CGCATCCAAGCTATCGACACTCTGGCCGCGCTCTGTCGCGAAGTGGGCAA
GGATAATATTATTCCGCTTGCCGACGATACAATGAACTTCTGTCTGATGA
TGCTGGAAGATGGTCCGGACGATCCTGAGTTCCGCAGGAGCATCTACAAC
CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCTCTGTGTT
CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTCTTCGGAGGACG
TGTTGCCACATGTTTCGGACAATGCGGAGGAAGATTTGATCCTG---GAT
ACGACCGATGTAGAGATTGATTTAGATCAAACAGACGACGAAGACGACCA
AGACGGCTACCAGGTGGAGAATGATTACGTTATTGAGAAGGAGGAGGCTA
TTATGGCACTTAAGGAGTTTGCTGCACACACGGGCGCCGCCTTTGCACCC
TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
GGACGACGTCCGTAAGGCGTGCATTGACGCCATTTGCGGATTCATTGTGG
CTCTCTACAAGTTGGGAGATGCCGCCGGCTTGAAGCGCGCCTGCGAGATT
GCCATTCCAAAGTTTGCACATATGATGCGCACTGACGACGAGGTTGGGGT
CGTACTCCATCTGCTTGACGTACTCGGCGATGTCTTCAAGGATGTCCAGT
TGCAGGCAATAAACAACCAGGAGCACGCCGAACTAATTTTCGGATGCATT
CGGGACGTCTTCACAAATAAGATGGCCTGTCAGTTTAACGAAGAGAGCGG
CGGTGGAGATGAGGAGGACTCGGAGGAAAGCGAGAACGACGAGATGCTGT
TCGAGAACGCTGCCAATCTGTTCCCCTTGTTTGGCTTGGCCCTTCAGCCG
GAGTTGTTCTCTCTTTATTTCGGACGCCTTTACCAATTTTATGTTCAAAG
GCTGGCGAAGGCAAAGGAGCGCGATATTCCAGAACATCGGGCTTACATCT
ATGGCGCATTGGCTGACTCCTTCAAGGCGCTGAAGGGATGCTCTGCTACT
TACTTTGACGGCCTGTGCCCCCTTTTTATCACCGGAACCAAGGATTCTGA
TGCCAAATCGCGACAGAACTCCTATTATGCACTAGGCGAACTGGTCATCC
ATTCCGAGGAAAAATCATTCGAGTCGTATCCGGCAATTCTGCAAGCCCTT
TCCGAAGCAATTGTCAGGGAGTCCCATCCCGCCGCCCTGGACAACATTTG
CGGAGCAGTTGCTCGCCTTATAGTTACCAACCCGGATTCAGTGCCGCTTG
CCCAGGTGCTGCCCGTGCTGCTCAACCATTTGCCCCTTAAGGAGGACGTA
GTGGAGAACGATATGATTCAGAAGGCGTTCCGCGTTCTATACGTAAAGGC
TCGCCCCAGCATTGTTGCACATCTCGAGCAAATCCTGGTCATTACCATAG
AGGCGATTTACAAGAAACAGATGCCAGACGACGAGACAACCGAGAGCGCA
GTGGCCCTCATCAAAGAGATTCGCGCCAATTACCCGGAACAGTTTAACCA
AGTATCAAACGCGAATCCGGAAGTGTTTAATTATGTGCAAACTCTG---
>C5
ATGGAGGCAGCTATTTTGGACATAATCAGCGGGATCCTGGGCATGGACAC
GGAACGGATTCGTCAGTCAACAGCCAAGATGATGAAGGCCTACGAGAATC
CCGATTCACTGCTGGTTCTCACCCAGATCGTGATGTCGGACCGGGCGGTC
CAGGAGCGGCATGTCGCCGCCGTGCTCCTCAAGAGGCGGATCAGCAAGTT
GCGCCACTGGCAGTTGGTTCCCGCCGAGCATCAGTCAGCAATTAAAACGA
ACATGCTTCAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG
GTAGCCCAGATAATTGGATCGCTGGTGCGACACGAGGCGGAGAAGGAACA
CTCCTGGTTGGAGGAAATACTGAAGTTCATTTACGAACGTTGCAGCAGTC
CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTACCACACTCATG
GACGCTGCTCCCGATCAGTTTTCGAACCACATGGATACTATCTTCCCGTT
GTTCGCCGGCGTTCTGGTAACCGCCGAGGCGAACGGTAACATGGCCACAC
CCACCGTGTTTAACGTGCTGACGGGTACGTGCTACCTCCTGCCCTTCGTC
AGTGGACATAGTGGTGCTGAGCAGATTGTTGTTAAGGCTGTGCCGCTAAT
TCTCAAGGCCCTAGGCGCCTTCGCCGAAAAGGGGGACAGTCAGGAGTTCA
TGGGAGCTTTTAATATCATAGACGCCATGGGCGAGTATGTGCCCCATTTG
CTGACCGGTAATGTGAAGCTGATTCTGGAGTTCTGTCTGATAATTGCGAG
CAACCAGCAGCTCGAGGATTCGATTCGAGTTCAGGTGATTACCTTTGTTG
GCAGCCTAATGCGCCTTAAGAAGAAGGTTATTATGAAGCAGAAACTGCTG
GAACCCACTCTTGCGGTTATGTTCGAAGTGATGTGCCAGGACTCCCTTGA
TGATGGTTACGATGATTACTTTTCGTCTGAGAGCTCGAATAGCCCGTCCA
CTGCAGCTACGCAGACTCTGGACTTGATGGCCCTCCACATGTCGCCGGAG
AAGTTTATTCCGCCACTACTGCAGCTGTTGGAGCCAGCGTTGCAGAGCCC
ACAACCTGTGCTTCGCCGCTCCTCTTTTATTTGTATGGGCGTCATTGCCG
AGGGCTGCTCCGAGGCCATTGGGAACAAGTATCTGGAGGTCATGCTGAAT
ATCGTCAAAGCTGGAATTTTCGACTCTGTTATGTTGGTGCGGGTCGCCGC
ATTCTTCGCCCTTGGACAGTTTTCCGAGTATCTTCAGCCGACAATCTGCA
AGTATGCTCCCCAGATTCTTCCCGTGCTGTTCGACTATCTGAGCCAGCTG
GTAATGGAACTCAAGATTGGTACGCCGGAACCGAAACACATGGATCGTAT
GTTCTATGCCTTGGAGACCTTTTGCGAGAATCTGGGGGATGACATTATTC
CCCATTTACCTACGCTGATGGAGCGTCTGTTTGGGGTTCTGGAACCCCAG
AACTCGCATCGAATGCGTGAAATGGGTTTGACGGCCATAGCAGCGGTCTC
AACCGCAGCTAAAGAACACCTGGTGCCCTATTTCCCTAGGATCATGAGTG
TACTACAGGGCTGTCTGGTGAAGGAGTGCCCAAAAGAAATGCAAAGTCTG
CGCATCCAAGCTATCGACACTCTGGCCGCGCTCTGTCGCGAAGTGGGCAG
GGATAATATTATTCCGCTTGCCGACGATACAATGAACTTCTGTCTGATGA
TGTTGGAAGATGGTCCGGACGATCCCGAAGTCCGCAGGAGCATATACAAC
CTGATGTCCTCCCTGTCATCAGTTGTCAAAGAGAGCATGGCCACTGTGTT
CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTCTTCGGAGGACG
TGTTGCCAAATGTGTCAGAGAATCCAGAGGATGATTTGATCCTG---GAT
ACAACCGATGTAGAGATTGATTTAGATCAAACAGATGACGAAGATGACCA
AGACTGCTACCAGGTGGAGAACGATTACGTTTTTGAGAAGGAGGAGGCTA
TTCTGGCACTTAGGGAGTTCGCTGCACATACGGGCGCCGCCTTCGCGCCC
TACTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA
GGGCGACGTCCGTAAGGCGTGCATTGACGCCATTTGCGGGTTCATTACGG
CTCTCCATAAGTTGGAAGATGCCGCCGGCTTGAAGCGCGCCTGCGAGATT
GCCATTCCAAAGTTTGCACATATGTTGCGCACTGACGACGAGGTTGGGGT
CGTACTCCATCTGCTTGACGAACTCGGCGATGTCTTCAAGGATGTCCAGT
TGCAGGCAATAAACAACCAGGAGCATGCCGAACTAATTTTCGGGTGCATC
CGCGACGTCTTCACAAATAAAATGGCCTGTCAGTTTAACGAGGAGAGCGG
TGGTGGAGATGAGGAGGATTCGGAGGAAAGCGAGAACGACGAAATGCTGT
TCGAGAACGCTGCCAATCTGTTCCCTTTGTTTGGCTTAGCCCTTCAGCCG
GAGTTGTTCTCGCTTTATTTCGGTCGTCTTTACCAATTTTATGTTCAAAG
GCTGGCCAAGGCAAAGGAGCGCGATATCCCAGAACATCGGGCTTACATCT
ATGGCGCTTTGGCTGACTCCTTCAAGGCGCTGAAGGGATGCTCTGCAACA
TACTTCGACGCCCTGTGCCCCATTTTTATCACTGGCTCCAAGGATTCTGA
TGCCAAATCGCGACAGAACTCCTATTATGCACTAGGCGAACTGGTCATCC
ATTCCGAGGAGAAATCATTCGAGTCTTATCCGGTAATTTTGCAAGCTCTT
TCCGAAGCAATTGTCAGGGAGTCCAATCCCCCCGCCTTGGACAACATTTG
CGGAGCAGTTGCTCGCCTCATAGTTACCAACCCTGATTCAGTGCCGCTTG
CCCAGGTGTTGCCCGTGTTGCTCAATCATTTGCCACTGAAGGAGGACGTC
ATTGAAAACGATATGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC
TCGCCCCAGCATTGTTGCACATCTCGAGCAAATCCTGGTCATCACCATAG
AGGCGATTTACAAGAAACAGATGCCAGACGACGAGACAACCGAGAGCGCG
GTGGCCCTCATCAAAGAGATTCGCGCCAATTACCCGGAACAGTTTAACCA
AGTATCAAACGCGAATCCGGAAGTTTTCAATTATGTGCAAACTCTG---
>C1
MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM
DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV
SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL
LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL
QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD
KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN
IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL
VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ
NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ
RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD
APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI
AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVPooAINSQEHAELIFGCI
RDIFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQP
ELFSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCAT
YFDALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQAL
SEAIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDT
VENDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESA
VALIKEIRANYPELFSKVSNMNPEVFNYVQAL
>C2
MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM
DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI
AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVPooAINSQEHAELIFACI
RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP
ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT
YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQAL
SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT
VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA
VALIKEISAKYPELFNKVSNMNPEVFNYVQAL
>C3
MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM
DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV
SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL
LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL
QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD
KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN
IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ
NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL
RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED
AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP
YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI
AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVPooAINSQEHAELIFACI
RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP
ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT
YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQAL
SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT
VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA
VALIKEISANYPELFNKVSNMNPEVFNYVQAL
>C4
MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT
VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM
DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV
SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL
LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE
KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL
VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ
NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL
RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN
LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLILoD
TTDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAP
YLQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEI
AIPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCI
RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP
ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT
YFDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQAL
SEAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV
VENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA
VALIKEIRANYPEQFNQVSNANPEVFNYVQTL
>C5
MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV
QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT
VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM
DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV
SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL
LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL
EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE
KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN
IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL
VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ
NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL
RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN
LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLILoD
TTDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAP
YLQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEI
AIPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCI
RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP
ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT
YFDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQAL
SEAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV
IENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA
VALIKEIRANYPEQFNQVSNANPEVFNYVQTL


                            MrBayes v3.2.2 x64

                      (Bayesian Analysis of Phylogeny)

              Distributed under the GNU General Public License


               Type "help" or "help <command>" for information
                     on the commands that are available.

                   Type "about" for authorship and general
                       information about the program.



   Executing file "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb"
   UNIX line termination
   Longest line length = 63
   Parsing file
   Expecting NEXUS formatted file
   Reading data block
      Allocated taxon set
      Allocated matrix
      Defining new matrix with 5 taxa and 3249 characters
      Missing data coded as ?
      Data matrix is interleaved
      Data is Dna
      Gaps coded as -
      Matching characters coded as .
      Taxon 1 -> C1
      Taxon 2 -> C2
      Taxon 3 -> C3
      Taxon 4 -> C4
      Taxon 5 -> C5
      Successfully read matrix
      Setting default partition (does not divide up characters)
      Setting model defaults
      Seed (for generating default start values) = 1477949339
      Setting output file names to "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run<i>.<p|t>"
   Exiting data block
   Reading mrbayes block
      Setting autoclose to yes
      Setting nowarnings to yes
      Defining charset called first_pos
      Defining charset called second_pos
      Defining charset called third_pos
      Defining partition called by_codon
      Setting by_codon as the partition, dividing characters into 3 parts.
      Setting model defaults
      Seed (for generating default start values) = 1305403167
      Setting Nst to 6 for partition 1
      Setting Nst to 6 for partition 2
      Setting Nst to 6 for partition 3
      Setting Rates to Invgamma for partition 1
      Setting Rates to Invgamma for partition 2
      Setting Rates to Invgamma for partition 3
      Successfully set likelihood model parameters to all
         applicable data partitions 
      Unlinking
      Setting number of generations to 1000000
      Running Markov chain
      MCMC stamp = 9043374597
      Seed = 1094797108
      Swapseed = 1477949339
      Model settings:

         Settings for partition 1 --
            Datatype  = DNA
            Nucmodel  = 4by4
            Nst       = 6
                        Substitution rates, expressed as proportions
                        of the rate sum, have a Dirichlet prior
                        (1.00,1.00,1.00,1.00,1.00,1.00)
            Covarion  = No
            # States  = 4
                        State frequencies have a Dirichlet prior
                        (1.00,1.00,1.00,1.00)
            Rates     = Invgamma
                        Gamma shape parameter is exponentially
                        distributed with parameter (2.00).
                        Proportion of invariable sites is uniformly dist-
                        ributed on the interval (0.00,1.00).
                        Gamma distribution is approximated using 4 categories.
                        Likelihood summarized over all rate categories in each generation.

         Settings for partition 2 --
            Datatype  = DNA
            Nucmodel  = 4by4
            Nst       = 6
                        Substitution rates, expressed as proportions
                        of the rate sum, have a Dirichlet prior
                        (1.00,1.00,1.00,1.00,1.00,1.00)
            Covarion  = No
            # States  = 4
                        State frequencies have a Dirichlet prior
                        (1.00,1.00,1.00,1.00)
            Rates     = Invgamma
                        Gamma shape parameter is exponentially
                        distributed with parameter (2.00).
                        Proportion of invariable sites is uniformly dist-
                        ributed on the interval (0.00,1.00).
                        Gamma distribution is approximated using 4 categories.
                        Likelihood summarized over all rate categories in each generation.

         Settings for partition 3 --
            Datatype  = DNA
            Nucmodel  = 4by4
            Nst       = 6
                        Substitution rates, expressed as proportions
                        of the rate sum, have a Dirichlet prior
                        (1.00,1.00,1.00,1.00,1.00,1.00)
            Covarion  = No
            # States  = 4
                        State frequencies have a Dirichlet prior
                        (1.00,1.00,1.00,1.00)
            Rates     = Invgamma
                        Gamma shape parameter is exponentially
                        distributed with parameter (2.00).
                        Proportion of invariable sites is uniformly dist-
                        ributed on the interval (0.00,1.00).
                        Gamma distribution is approximated using 4 categories.
                        Likelihood summarized over all rate categories in each generation.

      Active parameters: 

                          Partition(s)
         Parameters       1  2  3
         ------------------------
         Revmat           1  1  1
         Statefreq        2  2  2
         Shape            3  3  4
         Pinvar           5  5  5
         Ratemultiplier   6  6  6
         Topology         7  7  7
         Brlens           8  8  8
         ------------------------

         Parameters can be linked or unlinked across partitions using 'link' and 'unlink'

         1 --  Parameter  = Revmat{all}
               Type       = Rates of reversible rate matrix
               Prior      = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00)
               Partitions = All

         2 --  Parameter  = Pi{all}
               Type       = Stationary state frequencies
               Prior      = Dirichlet
               Partitions = All

         3 --  Parameter  = Alpha{1,2}
               Type       = Shape of scaled gamma distribution of site rates
               Prior      = Exponential(2.00)
               Partitions = 1 and 2

         4 --  Parameter  = Alpha{3}
               Type       = Shape of scaled gamma distribution of site rates
               Prior      = Exponential(2.00)
               Partition  = 3

         5 --  Parameter  = Pinvar{all}
               Type       = Proportion of invariable sites
               Prior      = Uniform(0.00,1.00)
               Partitions = All

         6 --  Parameter  = Ratemultiplier{all}
               Type       = Partition-specific rate multiplier
               Prior      = Fixed(1.0)
               Partitions = All

         7 --  Parameter  = Tau{all}
               Type       = Topology
               Prior      = All topologies equally probable a priori
               Partitions = All
               Subparam.  = V{all}

         8 --  Parameter  = V{all}
               Type       = Branch lengths
               Prior      = Unconstrained:Exponential(10.0)
               Partitions = All



      The MCMC sampler will use the following moves:
         With prob.  Chain will use move
            1.06 %   Dirichlet(Revmat{all})
            1.06 %   Slider(Revmat{all})
            1.06 %   Dirichlet(Pi{all})
            1.06 %   Slider(Pi{all})
            2.13 %   Multiplier(Alpha{1,2})
            2.13 %   Multiplier(Alpha{3})
            2.13 %   Slider(Pinvar{all})
           10.64 %   ExtSPR(Tau{all},V{all})
           10.64 %   ExtTBR(Tau{all},V{all})
           10.64 %   NNI(Tau{all},V{all})
           10.64 %   ParsSPR(Tau{all},V{all})
           31.91 %   Multiplier(V{all})
           10.64 %   Nodeslider(V{all})
            4.26 %   TLMultiplier(V{all})

      Division 1 has 73 unique site patterns
      Division 2 has 49 unique site patterns
      Division 3 has 102 unique site patterns
      Initializing conditional likelihoods
      Using standard SSE likelihood calculator for division 1 (single-precision)
      Using standard SSE likelihood calculator for division 2 (single-precision)
      Using standard SSE likelihood calculator for division 3 (single-precision)
      Initializing invariable-site conditional likelihoods

      Initial log likelihoods and log prior probs for run 1:
         Chain 1 -- -8829.189420 -- -25.624409
         Chain 2 -- -9543.339249 -- -25.624409
         Chain 3 -- -9405.673289 -- -25.624409
         Chain 4 -- -9196.036162 -- -25.624409

      Initial log likelihoods and log prior probs for run 2:
         Chain 1 -- -9415.826390 -- -25.624409
         Chain 2 -- -9187.459734 -- -25.624409
         Chain 3 -- -9196.036162 -- -25.624409
         Chain 4 -- -8832.876897 -- -25.624409


      Using a relative burnin of 25.0 % for diagnostics

      Chain results (1000000 generations requested):

          0 -- [-8829.189] (-9543.339) (-9405.673) (-9196.036) * [-9415.826] (-9187.460) (-9196.036) (-8832.877) 
        500 -- (-7714.556) (-7713.775) [-7713.535] (-7722.084) * (-7724.756) (-7728.434) (-7742.142) [-7722.410] -- 0:33:19
       1000 -- (-7698.227) (-7708.503) (-7702.672) [-7690.756] * [-7702.411] (-7707.719) (-7706.022) (-7708.988) -- 0:16:39
       1500 -- (-7680.252) (-7684.016) [-7668.901] (-7681.164) * (-7694.044) (-7688.857) (-7685.149) [-7675.797] -- 0:11:05
       2000 -- (-7671.379) (-7662.097) (-7662.841) [-7672.671] * [-7675.794] (-7684.041) (-7685.160) (-7662.945) -- 0:08:19
       2500 -- (-7670.009) [-7662.703] (-7661.295) (-7667.403) * (-7667.809) (-7676.432) (-7671.945) [-7672.930] -- 0:06:39
       3000 -- (-7658.563) [-7664.474] (-7662.337) (-7669.771) * [-7660.779] (-7670.140) (-7663.461) (-7667.134) -- 0:11:04
       3500 -- (-7659.532) [-7663.157] (-7661.787) (-7651.882) * (-7656.538) (-7667.994) (-7656.818) [-7655.894] -- 0:09:29
       4000 -- (-7655.396) (-7657.877) [-7655.246] (-7659.060) * (-7659.107) (-7663.503) [-7658.700] (-7659.421) -- 0:08:18
       4500 -- (-7655.548) (-7657.867) (-7661.487) [-7656.037] * (-7654.350) (-7662.627) [-7658.853] (-7663.126) -- 0:07:22
       5000 -- [-7654.674] (-7654.005) (-7659.382) (-7652.998) * [-7658.747] (-7658.824) (-7661.670) (-7663.643) -- 0:06:38

      Average standard deviation of split frequencies: 0.000000

       5500 -- (-7661.671) (-7658.429) (-7661.697) [-7655.085] * (-7668.290) (-7658.901) [-7658.423] (-7665.081) -- 0:06:01
       6000 -- [-7659.601] (-7657.897) (-7659.516) (-7662.676) * (-7663.979) [-7657.889] (-7659.664) (-7661.600) -- 0:08:17
       6500 -- [-7658.550] (-7657.536) (-7664.877) (-7659.327) * (-7658.992) (-7655.093) [-7658.004] (-7658.305) -- 0:07:38
       7000 -- (-7656.733) (-7654.814) [-7657.518] (-7658.917) * (-7657.960) [-7658.173] (-7658.930) (-7657.911) -- 0:07:05
       7500 -- (-7654.312) [-7659.724] (-7666.573) (-7656.597) * (-7657.639) (-7656.340) [-7661.807] (-7656.443) -- 0:06:37
       8000 -- (-7656.423) [-7661.998] (-7667.133) (-7661.103) * (-7656.507) (-7657.412) (-7663.908) [-7664.718] -- 0:06:12
       8500 -- [-7654.878] (-7660.917) (-7657.178) (-7666.520) * [-7652.834] (-7660.704) (-7660.813) (-7665.350) -- 0:05:49
       9000 -- [-7653.325] (-7657.070) (-7658.370) (-7661.146) * (-7653.548) (-7660.759) (-7667.237) [-7657.933] -- 0:07:20
       9500 -- (-7658.772) [-7654.511] (-7655.069) (-7657.899) * (-7658.480) (-7662.872) [-7662.065] (-7656.285) -- 0:06:57
      10000 -- [-7662.009] (-7656.379) (-7659.175) (-7657.405) * (-7657.963) [-7655.674] (-7656.655) (-7659.962) -- 0:06:36

      Average standard deviation of split frequencies: 0.000000

      10500 -- (-7668.182) (-7656.812) [-7656.235] (-7657.508) * (-7656.381) (-7656.094) (-7668.424) [-7658.580] -- 0:06:16
      11000 -- [-7658.144] (-7658.619) (-7660.525) (-7657.038) * [-7656.577] (-7660.230) (-7656.407) (-7665.193) -- 0:05:59
      11500 -- (-7660.148) (-7657.079) (-7659.831) [-7660.411] * (-7654.099) (-7660.604) (-7657.793) [-7663.849] -- 0:05:43
      12000 -- [-7664.387] (-7659.697) (-7662.881) (-7657.547) * [-7660.454] (-7658.526) (-7657.450) (-7662.470) -- 0:06:51
      12500 -- (-7658.692) (-7661.393) [-7654.058] (-7658.029) * (-7656.652) (-7654.938) (-7658.954) [-7663.875] -- 0:06:35
      13000 -- (-7660.055) (-7659.079) (-7654.626) [-7659.715] * (-7661.950) [-7653.383] (-7656.048) (-7658.945) -- 0:06:19
      13500 -- [-7656.094] (-7658.493) (-7659.492) (-7660.571) * (-7665.741) (-7652.890) (-7655.803) [-7655.990] -- 0:06:05
      14000 -- (-7655.037) (-7661.548) (-7660.102) [-7660.158] * (-7663.646) [-7655.801] (-7654.893) (-7656.855) -- 0:05:52
      14500 -- [-7661.758] (-7663.470) (-7653.541) (-7665.220) * (-7663.015) [-7669.839] (-7657.908) (-7655.569) -- 0:05:39
      15000 -- (-7662.081) (-7658.418) (-7658.944) [-7655.693] * (-7655.279) [-7665.028] (-7659.528) (-7657.440) -- 0:06:34

      Average standard deviation of split frequencies: 0.000000

      15500 -- (-7658.053) (-7655.087) [-7654.247] (-7662.022) * [-7658.944] (-7665.645) (-7660.281) (-7656.757) -- 0:06:21
      16000 -- (-7659.356) [-7660.914] (-7652.601) (-7666.539) * (-7659.441) (-7658.743) [-7658.142] (-7655.577) -- 0:06:09
      16500 -- (-7665.596) (-7661.335) (-7655.406) [-7654.489] * (-7659.936) (-7653.952) [-7663.351] (-7653.264) -- 0:05:57
      17000 -- [-7659.038] (-7655.874) (-7656.830) (-7660.693) * (-7656.489) (-7658.767) (-7657.327) [-7651.634] -- 0:05:46
      17500 -- (-7659.727) [-7661.361] (-7656.544) (-7664.796) * (-7654.477) (-7661.446) [-7657.434] (-7651.690) -- 0:05:36
      18000 -- [-7658.831] (-7660.811) (-7656.771) (-7663.708) * (-7656.592) (-7665.703) (-7655.852) [-7653.270] -- 0:06:21
      18500 -- (-7661.807) (-7656.474) (-7659.150) [-7657.482] * [-7654.993] (-7656.329) (-7653.353) (-7656.432) -- 0:06:11
      19000 -- (-7653.640) (-7658.007) [-7654.513] (-7659.867) * (-7653.728) (-7655.486) (-7655.988) [-7661.404] -- 0:06:01
      19500 -- (-7657.953) (-7660.458) (-7667.092) [-7652.778] * (-7653.011) (-7662.335) [-7655.860] (-7658.522) -- 0:05:51
      20000 -- (-7659.059) (-7654.770) [-7656.905] (-7656.879) * [-7658.238] (-7669.234) (-7656.488) (-7655.801) -- 0:05:43

      Average standard deviation of split frequencies: 0.000000

      20500 -- [-7655.495] (-7650.918) (-7661.933) (-7657.438) * (-7658.337) [-7657.085] (-7663.758) (-7653.516) -- 0:05:34
      21000 -- (-7663.735) [-7655.526] (-7659.567) (-7662.206) * (-7657.896) (-7665.741) (-7657.553) [-7654.619] -- 0:06:12
      21500 -- (-7658.573) [-7655.636] (-7660.088) (-7654.961) * (-7656.337) (-7662.864) (-7653.635) [-7658.413] -- 0:06:04
      22000 -- (-7655.300) (-7658.529) (-7661.007) [-7660.774] * (-7659.732) (-7656.757) (-7658.090) [-7657.215] -- 0:05:55
      22500 -- (-7657.600) (-7654.149) (-7660.974) [-7652.869] * [-7657.050] (-7656.596) (-7658.333) (-7651.261) -- 0:05:47
      23000 -- [-7652.367] (-7657.422) (-7660.950) (-7658.354) * (-7659.467) (-7656.265) [-7656.521] (-7656.620) -- 0:05:39
      23500 -- (-7657.968) (-7658.664) [-7660.941] (-7656.621) * [-7672.875] (-7656.733) (-7664.580) (-7655.988) -- 0:05:32
      24000 -- [-7660.939] (-7653.481) (-7665.997) (-7660.887) * (-7664.238) (-7664.011) [-7658.444] (-7656.827) -- 0:06:06
      24500 -- (-7657.255) (-7655.553) (-7657.842) [-7656.780] * (-7661.260) [-7655.668] (-7655.858) (-7658.025) -- 0:05:58
      25000 -- (-7657.090) (-7657.468) (-7659.832) [-7655.357] * (-7659.523) (-7658.070) [-7655.083] (-7657.600) -- 0:05:51

      Average standard deviation of split frequencies: 0.000000

      25500 -- (-7658.001) (-7653.651) (-7661.768) [-7653.881] * (-7660.321) (-7654.705) [-7657.581] (-7663.673) -- 0:05:43
      26000 -- (-7660.928) [-7656.476] (-7657.489) (-7659.932) * (-7671.033) [-7656.697] (-7658.716) (-7663.101) -- 0:05:37
      26500 -- (-7656.891) (-7666.341) [-7655.900] (-7660.380) * (-7662.145) (-7658.988) (-7657.314) [-7659.144] -- 0:06:07
      27000 -- (-7666.138) (-7655.904) (-7654.273) [-7663.968] * (-7659.699) [-7664.726] (-7660.603) (-7654.718) -- 0:06:00
      27500 -- (-7662.234) [-7658.253] (-7658.021) (-7657.212) * (-7665.092) (-7660.762) (-7656.974) [-7655.082] -- 0:05:53
      28000 -- (-7656.368) [-7657.898] (-7657.327) (-7665.350) * (-7659.483) [-7653.624] (-7656.234) (-7662.930) -- 0:05:47
      28500 -- [-7658.052] (-7661.422) (-7661.213) (-7660.002) * (-7659.516) (-7655.794) [-7655.284] (-7658.930) -- 0:05:40
      29000 -- (-7656.397) [-7659.828] (-7656.090) (-7655.469) * (-7658.068) (-7655.954) (-7656.633) [-7655.008] -- 0:05:34
      29500 -- [-7654.143] (-7661.179) (-7660.049) (-7662.052) * [-7655.774] (-7656.018) (-7656.782) (-7658.061) -- 0:06:01
      30000 -- [-7659.849] (-7663.553) (-7654.168) (-7659.813) * (-7656.396) (-7663.291) (-7660.872) [-7656.792] -- 0:05:55

      Average standard deviation of split frequencies: 0.000000

      30500 -- (-7662.569) (-7665.861) [-7659.565] (-7658.948) * (-7657.470) (-7656.144) (-7661.945) [-7665.140] -- 0:05:49
      31000 -- (-7663.284) (-7658.109) (-7654.883) [-7656.031] * (-7659.478) (-7662.370) (-7659.200) [-7661.098] -- 0:05:43
      31500 -- (-7659.154) [-7656.240] (-7663.869) (-7656.498) * [-7663.379] (-7656.431) (-7658.209) (-7658.886) -- 0:05:38
      32000 -- (-7663.309) (-7653.504) [-7657.016] (-7656.204) * [-7661.441] (-7660.204) (-7659.727) (-7663.187) -- 0:05:32
      32500 -- [-7660.123] (-7653.875) (-7652.984) (-7659.029) * (-7653.696) (-7663.847) [-7665.243] (-7658.585) -- 0:05:57
      33000 -- (-7665.057) [-7654.138] (-7661.030) (-7655.588) * (-7652.772) (-7664.153) (-7660.829) [-7663.888] -- 0:05:51
      33500 -- [-7662.664] (-7658.845) (-7660.178) (-7655.889) * (-7653.194) (-7662.342) [-7659.242] (-7657.861) -- 0:05:46
      34000 -- [-7660.470] (-7657.373) (-7663.219) (-7658.837) * [-7653.994] (-7659.222) (-7660.595) (-7662.183) -- 0:05:40
      34500 -- (-7657.203) [-7661.619] (-7658.880) (-7660.938) * (-7656.809) (-7658.525) [-7661.554] (-7658.403) -- 0:05:35
      35000 -- (-7655.825) (-7661.236) [-7655.481] (-7656.904) * (-7662.616) (-7657.271) (-7662.725) [-7658.973] -- 0:05:58

      Average standard deviation of split frequencies: 0.000000

      35500 -- (-7654.740) (-7661.401) [-7654.929] (-7658.467) * (-7656.374) (-7658.105) [-7657.125] (-7654.907) -- 0:05:53
      36000 -- (-7655.287) (-7664.156) (-7659.199) [-7656.745] * [-7661.915] (-7663.367) (-7666.693) (-7657.403) -- 0:05:48
      36500 -- (-7655.113) [-7656.274] (-7656.991) (-7654.599) * (-7655.461) (-7657.572) [-7668.172] (-7655.049) -- 0:05:43
      37000 -- (-7657.425) (-7661.896) [-7656.752] (-7656.877) * (-7658.422) [-7656.816] (-7662.577) (-7656.548) -- 0:05:38
      37500 -- (-7657.022) (-7663.200) [-7658.693] (-7658.556) * (-7663.122) (-7660.685) [-7659.368] (-7657.299) -- 0:05:33
      38000 -- (-7668.644) (-7656.927) (-7659.795) [-7655.988] * [-7659.998] (-7659.847) (-7661.920) (-7660.276) -- 0:05:54
      38500 -- (-7660.491) (-7656.732) (-7661.303) [-7656.129] * (-7666.266) [-7655.841] (-7669.884) (-7660.930) -- 0:05:49
      39000 -- [-7663.973] (-7670.593) (-7661.592) (-7653.205) * (-7658.589) (-7653.648) [-7658.081] (-7660.174) -- 0:05:44
      39500 -- (-7666.468) (-7654.317) (-7658.278) [-7653.467] * [-7656.654] (-7662.333) (-7654.549) (-7657.246) -- 0:05:40
      40000 -- (-7657.315) (-7652.653) (-7655.619) [-7660.684] * (-7664.880) (-7667.988) [-7658.708] (-7665.069) -- 0:05:36

      Average standard deviation of split frequencies: 0.000000

      40500 -- (-7653.516) (-7657.640) (-7657.450) [-7658.278] * [-7657.824] (-7659.258) (-7655.023) (-7653.589) -- 0:05:31
      41000 -- (-7657.538) (-7653.580) (-7667.137) [-7659.948] * (-7663.259) (-7680.443) [-7655.766] (-7658.035) -- 0:05:50
      41500 -- (-7666.000) (-7654.507) (-7659.559) [-7653.296] * [-7661.739] (-7660.761) (-7656.415) (-7659.368) -- 0:05:46
      42000 -- (-7660.236) [-7656.661] (-7663.084) (-7659.073) * (-7658.012) (-7661.894) [-7651.354] (-7657.043) -- 0:05:42
      42500 -- (-7657.993) (-7652.717) [-7658.698] (-7661.254) * (-7656.537) (-7661.778) [-7656.054] (-7657.960) -- 0:05:37
      43000 -- (-7655.833) [-7655.417] (-7661.820) (-7658.981) * (-7652.842) (-7659.765) (-7657.629) [-7662.611] -- 0:05:33
      43500 -- (-7660.605) [-7651.596] (-7653.516) (-7661.742) * (-7655.612) (-7654.026) [-7659.042] (-7657.969) -- 0:05:51
      44000 -- (-7655.948) (-7656.295) [-7654.273] (-7658.864) * [-7659.553] (-7658.331) (-7658.847) (-7668.344) -- 0:05:47
      44500 -- [-7659.858] (-7663.447) (-7657.864) (-7657.980) * (-7658.394) (-7655.850) (-7654.592) [-7654.695] -- 0:05:43
      45000 -- (-7656.736) [-7658.338] (-7657.583) (-7667.825) * (-7655.835) (-7656.929) (-7657.485) [-7655.203] -- 0:05:39

      Average standard deviation of split frequencies: 0.000000

      45500 -- [-7658.756] (-7654.678) (-7656.757) (-7660.363) * (-7657.829) [-7654.995] (-7657.367) (-7652.612) -- 0:05:35
      46000 -- (-7662.805) (-7654.850) [-7659.747] (-7659.448) * [-7657.847] (-7659.762) (-7661.164) (-7656.509) -- 0:05:52
      46500 -- (-7662.614) (-7660.461) (-7662.293) [-7667.374] * (-7660.681) (-7656.985) (-7657.832) [-7660.663] -- 0:05:48
      47000 -- [-7661.215] (-7661.310) (-7662.565) (-7655.806) * (-7655.880) (-7653.409) (-7668.729) [-7654.767] -- 0:05:44
      47500 -- (-7655.494) (-7657.464) (-7657.970) [-7661.704] * [-7654.403] (-7661.450) (-7656.508) (-7654.494) -- 0:05:40
      48000 -- [-7653.514] (-7661.338) (-7664.057) (-7657.331) * (-7656.334) (-7659.648) [-7657.929] (-7657.029) -- 0:05:37
      48500 -- (-7658.409) (-7663.932) (-7668.558) [-7655.117] * (-7662.423) (-7657.437) (-7661.146) [-7657.296] -- 0:05:53
      49000 -- (-7655.603) (-7664.896) [-7655.915] (-7661.255) * (-7655.968) [-7656.313] (-7654.679) (-7658.589) -- 0:05:49
      49500 -- (-7655.359) [-7659.646] (-7657.964) (-7661.760) * (-7659.978) (-7654.115) (-7656.216) [-7655.916] -- 0:05:45
      50000 -- (-7666.107) (-7661.143) [-7652.210] (-7671.924) * (-7662.034) [-7655.953] (-7660.286) (-7658.200) -- 0:05:42

      Average standard deviation of split frequencies: 0.000000

      50500 -- (-7657.262) [-7654.612] (-7656.773) (-7666.440) * [-7656.865] (-7663.871) (-7661.571) (-7658.369) -- 0:05:38
      51000 -- (-7654.198) (-7658.316) [-7659.936] (-7660.121) * (-7659.843) [-7655.711] (-7658.803) (-7656.368) -- 0:05:34
      51500 -- (-7657.563) (-7663.716) (-7659.219) [-7658.937] * [-7656.754] (-7656.175) (-7658.948) (-7663.354) -- 0:05:49
      52000 -- (-7661.643) (-7658.261) [-7652.336] (-7665.439) * (-7661.839) (-7657.182) (-7657.664) [-7659.693] -- 0:05:46
      52500 -- (-7661.201) (-7654.154) (-7654.680) [-7659.870] * [-7658.066] (-7662.263) (-7657.845) (-7658.869) -- 0:05:42
      53000 -- (-7665.742) (-7658.796) (-7660.991) [-7657.127] * (-7658.672) [-7663.631] (-7653.328) (-7663.798) -- 0:05:39
      53500 -- (-7660.243) (-7660.918) [-7659.476] (-7657.497) * (-7661.007) [-7661.170] (-7660.822) (-7659.326) -- 0:05:36
      54000 -- (-7656.974) (-7658.205) (-7662.273) [-7657.837] * [-7658.257] (-7660.463) (-7656.677) (-7669.272) -- 0:05:32
      54500 -- (-7667.453) [-7653.211] (-7658.387) (-7664.765) * (-7659.716) (-7661.427) (-7656.829) [-7659.972] -- 0:05:46
      55000 -- (-7658.820) (-7654.286) [-7659.935] (-7662.495) * [-7660.080] (-7661.928) (-7658.241) (-7657.727) -- 0:05:43

      Average standard deviation of split frequencies: 0.000000

      55500 -- (-7661.198) [-7653.602] (-7662.841) (-7668.190) * (-7657.381) (-7662.879) (-7656.618) [-7661.089] -- 0:05:40
      56000 -- (-7658.864) (-7656.035) [-7661.096] (-7660.126) * [-7653.167] (-7662.112) (-7657.516) (-7655.687) -- 0:05:37
      56500 -- (-7664.923) [-7662.313] (-7660.076) (-7655.913) * (-7653.315) (-7665.151) [-7655.333] (-7657.130) -- 0:05:33
      57000 -- (-7654.716) [-7660.261] (-7658.000) (-7657.738) * [-7655.940] (-7660.608) (-7659.157) (-7662.438) -- 0:05:30
      57500 -- (-7656.530) [-7655.703] (-7666.610) (-7661.499) * (-7667.635) (-7658.789) (-7659.711) [-7657.324] -- 0:05:44
      58000 -- (-7663.760) [-7659.364] (-7655.730) (-7658.524) * (-7659.276) (-7660.515) [-7661.414] (-7659.910) -- 0:05:41
      58500 -- (-7663.612) (-7659.182) (-7654.623) [-7659.016] * (-7656.234) (-7656.555) [-7658.358] (-7664.560) -- 0:05:37
      59000 -- (-7655.299) (-7660.006) [-7653.896] (-7668.224) * [-7658.448] (-7662.739) (-7660.121) (-7666.867) -- 0:05:34
      59500 -- (-7656.797) [-7661.481] (-7658.803) (-7659.885) * [-7655.404] (-7655.856) (-7658.850) (-7662.683) -- 0:05:31
      60000 -- (-7662.178) (-7658.531) [-7657.037] (-7659.392) * [-7658.984] (-7660.089) (-7657.705) (-7655.552) -- 0:05:29

      Average standard deviation of split frequencies: 0.000000

      60500 -- (-7661.350) [-7658.407] (-7658.758) (-7653.653) * (-7653.030) (-7659.008) [-7661.458] (-7662.259) -- 0:05:41
      61000 -- [-7659.097] (-7663.277) (-7661.516) (-7660.567) * (-7659.425) (-7657.486) (-7655.728) [-7657.334] -- 0:05:38
      61500 -- (-7654.321) [-7665.367] (-7663.908) (-7668.272) * (-7654.083) (-7656.988) [-7654.119] (-7653.548) -- 0:05:35
      62000 -- [-7653.356] (-7658.553) (-7661.597) (-7656.169) * (-7665.572) [-7659.762] (-7656.848) (-7661.503) -- 0:05:32
      62500 -- [-7653.692] (-7656.136) (-7660.240) (-7659.185) * (-7655.019) [-7657.663] (-7656.696) (-7660.118) -- 0:05:30
      63000 -- [-7653.547] (-7660.832) (-7665.531) (-7653.805) * (-7656.217) [-7656.378] (-7655.149) (-7659.014) -- 0:05:27
      63500 -- (-7663.675) [-7657.718] (-7663.590) (-7657.911) * (-7654.596) (-7653.787) (-7657.577) [-7658.527] -- 0:05:39
      64000 -- [-7658.407] (-7658.265) (-7660.050) (-7662.577) * (-7654.162) (-7656.436) (-7661.464) [-7656.903] -- 0:05:36
      64500 -- (-7657.581) [-7664.454] (-7661.471) (-7665.981) * (-7661.770) (-7661.903) (-7663.288) [-7654.395] -- 0:05:33
      65000 -- (-7654.926) (-7657.508) [-7655.320] (-7662.564) * (-7659.604) (-7655.326) [-7661.321] (-7656.090) -- 0:05:30

      Average standard deviation of split frequencies: 0.000000

      65500 -- (-7660.533) [-7663.089] (-7658.567) (-7670.738) * [-7660.083] (-7658.022) (-7658.088) (-7657.040) -- 0:05:28
      66000 -- (-7661.558) (-7651.592) (-7658.018) [-7658.848] * (-7659.184) (-7653.972) [-7652.705] (-7656.600) -- 0:05:25
      66500 -- (-7657.374) [-7651.861] (-7660.289) (-7658.615) * (-7660.204) (-7659.046) [-7656.243] (-7657.332) -- 0:05:36
      67000 -- (-7664.804) (-7655.020) (-7667.086) [-7657.570] * (-7654.305) (-7657.796) [-7652.805] (-7654.706) -- 0:05:34
      67500 -- (-7660.061) [-7660.166] (-7666.534) (-7652.513) * (-7655.087) (-7660.131) [-7653.465] (-7656.499) -- 0:05:31
      68000 -- [-7661.268] (-7656.823) (-7662.918) (-7655.411) * (-7657.037) (-7661.686) [-7653.280] (-7664.185) -- 0:05:28
      68500 -- (-7657.394) (-7655.210) [-7660.336] (-7657.073) * (-7655.806) (-7658.966) [-7657.130] (-7661.001) -- 0:05:39
      69000 -- (-7662.346) (-7655.188) [-7654.558] (-7656.613) * (-7658.227) (-7659.578) [-7654.943] (-7660.822) -- 0:05:37
      69500 -- (-7660.297) (-7660.565) [-7658.597] (-7652.438) * (-7661.293) [-7662.687] (-7654.916) (-7666.551) -- 0:05:34
      70000 -- (-7657.512) (-7658.657) [-7660.168] (-7658.451) * (-7658.892) [-7655.750] (-7657.054) (-7669.633) -- 0:05:32

      Average standard deviation of split frequencies: 0.000000

      70500 -- (-7656.914) (-7657.340) [-7657.096] (-7667.136) * [-7658.778] (-7657.947) (-7660.098) (-7660.708) -- 0:05:42
      71000 -- [-7652.618] (-7658.777) (-7656.908) (-7661.129) * (-7663.986) [-7662.725] (-7662.435) (-7659.093) -- 0:05:40
      71500 -- [-7656.381] (-7659.997) (-7657.475) (-7661.323) * (-7665.955) [-7656.569] (-7657.353) (-7654.572) -- 0:05:37
      72000 -- (-7656.444) (-7663.265) [-7654.934] (-7656.639) * (-7660.668) (-7659.165) (-7662.206) [-7659.618] -- 0:05:35
      72500 -- (-7654.775) (-7654.815) [-7655.752] (-7654.328) * (-7660.766) (-7655.091) (-7653.664) [-7659.533] -- 0:05:45
      73000 -- [-7656.242] (-7663.401) (-7661.564) (-7661.224) * (-7658.113) [-7652.974] (-7658.010) (-7662.768) -- 0:05:42
      73500 -- [-7660.212] (-7657.375) (-7656.422) (-7653.829) * (-7662.721) (-7656.639) [-7654.616] (-7657.625) -- 0:05:40
      74000 -- [-7652.707] (-7657.090) (-7654.395) (-7658.371) * (-7658.542) [-7660.245] (-7659.961) (-7656.945) -- 0:05:37
      74500 -- [-7653.574] (-7661.840) (-7662.867) (-7658.514) * [-7655.085] (-7661.610) (-7659.642) (-7656.303) -- 0:05:35
      75000 -- (-7655.700) (-7657.429) (-7660.814) [-7655.233] * [-7655.746] (-7660.283) (-7655.599) (-7661.864) -- 0:05:45

      Average standard deviation of split frequencies: 0.000000

      75500 -- (-7664.779) [-7660.517] (-7664.657) (-7654.822) * (-7666.042) (-7666.329) (-7655.732) [-7657.964] -- 0:05:42
      76000 -- [-7661.336] (-7660.785) (-7657.074) (-7658.343) * [-7663.277] (-7664.012) (-7661.069) (-7663.834) -- 0:05:40
      76500 -- (-7662.614) (-7662.799) [-7661.350] (-7657.583) * (-7656.679) (-7653.503) [-7665.562] (-7662.679) -- 0:05:38
      77000 -- (-7655.232) (-7669.955) [-7661.894] (-7655.508) * (-7662.444) [-7656.458] (-7658.449) (-7657.035) -- 0:05:35
      77500 -- (-7662.061) (-7668.169) (-7662.765) [-7651.787] * [-7654.290] (-7657.320) (-7654.190) (-7661.722) -- 0:05:45
      78000 -- (-7656.312) (-7662.599) [-7664.162] (-7655.996) * (-7653.159) (-7656.608) (-7667.322) [-7654.995] -- 0:05:42
      78500 -- [-7659.202] (-7664.992) (-7656.875) (-7654.957) * (-7655.026) (-7652.882) [-7660.153] (-7656.873) -- 0:05:40
      79000 -- (-7662.799) (-7668.050) [-7658.194] (-7654.583) * [-7658.070] (-7663.728) (-7657.009) (-7661.695) -- 0:05:38
      79500 -- (-7660.253) (-7662.846) (-7656.818) [-7654.570] * (-7655.097) (-7658.146) (-7661.376) [-7658.229] -- 0:05:35
      80000 -- (-7663.442) (-7662.405) (-7662.670) [-7656.474] * (-7665.432) (-7657.306) (-7652.521) [-7661.691] -- 0:05:33

      Average standard deviation of split frequencies: 0.000000

      80500 -- (-7664.269) (-7659.226) (-7657.022) [-7655.297] * [-7656.732] (-7659.582) (-7656.565) (-7663.084) -- 0:05:31
      81000 -- (-7662.438) [-7662.815] (-7658.334) (-7655.539) * (-7656.673) (-7657.025) [-7651.417] (-7655.121) -- 0:05:40
      81500 -- (-7656.696) (-7660.625) [-7653.173] (-7661.301) * (-7653.626) [-7656.060] (-7658.007) (-7658.128) -- 0:05:38
      82000 -- (-7657.235) [-7656.686] (-7664.097) (-7655.241) * (-7655.836) [-7661.850] (-7662.872) (-7659.357) -- 0:05:35
      82500 -- (-7654.828) (-7654.981) (-7659.247) [-7655.335] * (-7663.313) (-7659.719) [-7656.131] (-7653.921) -- 0:05:33
      83000 -- (-7659.137) (-7654.361) [-7660.415] (-7655.890) * (-7660.107) (-7658.232) (-7663.029) [-7655.950] -- 0:05:31
      83500 -- (-7663.980) (-7657.724) [-7654.203] (-7655.928) * (-7660.543) (-7662.549) [-7655.491] (-7660.909) -- 0:05:29
      84000 -- (-7658.133) [-7656.612] (-7658.422) (-7669.924) * [-7661.099] (-7667.160) (-7662.167) (-7655.487) -- 0:05:38
      84500 -- [-7662.101] (-7659.719) (-7658.746) (-7669.027) * [-7658.397] (-7656.790) (-7662.867) (-7655.202) -- 0:05:35
      85000 -- [-7658.866] (-7663.722) (-7655.416) (-7672.919) * [-7658.426] (-7659.946) (-7657.587) (-7654.651) -- 0:05:33

      Average standard deviation of split frequencies: 0.000000

      85500 -- [-7659.697] (-7659.930) (-7657.401) (-7662.648) * (-7656.144) [-7655.399] (-7658.495) (-7657.270) -- 0:05:31
      86000 -- (-7659.725) (-7660.574) [-7657.174] (-7659.645) * (-7658.694) (-7656.431) [-7656.603] (-7660.895) -- 0:05:29
      86500 -- [-7655.446] (-7660.782) (-7657.940) (-7657.514) * (-7661.687) (-7675.065) [-7657.703] (-7660.508) -- 0:05:27
      87000 -- (-7651.380) (-7659.424) [-7660.576] (-7660.688) * (-7665.175) [-7660.961] (-7655.868) (-7662.133) -- 0:05:35
      87500 -- (-7653.236) (-7663.478) [-7657.609] (-7656.506) * (-7655.025) (-7659.189) (-7659.733) [-7656.346] -- 0:05:33
      88000 -- (-7653.996) (-7658.444) [-7659.113] (-7657.351) * (-7656.503) (-7656.218) (-7659.636) [-7657.839] -- 0:05:31
      88500 -- [-7658.272] (-7657.443) (-7663.503) (-7656.745) * (-7661.892) (-7654.540) [-7656.780] (-7661.172) -- 0:05:29
      89000 -- [-7655.902] (-7654.478) (-7664.543) (-7654.745) * [-7653.260] (-7657.286) (-7654.581) (-7656.880) -- 0:05:27
      89500 -- (-7654.582) (-7654.337) [-7660.931] (-7664.999) * (-7657.717) [-7653.383] (-7660.852) (-7656.280) -- 0:05:35
      90000 -- (-7665.069) (-7653.865) (-7663.450) [-7655.696] * (-7660.561) [-7656.687] (-7670.276) (-7657.886) -- 0:05:33

      Average standard deviation of split frequencies: 0.000000

      90500 -- (-7655.747) (-7659.230) (-7658.376) [-7656.245] * (-7657.947) (-7655.442) [-7659.203] (-7658.075) -- 0:05:31
      91000 -- (-7655.934) (-7662.039) [-7658.362] (-7654.065) * [-7658.840] (-7660.808) (-7659.343) (-7653.791) -- 0:05:29
      91500 -- [-7655.022] (-7656.121) (-7654.612) (-7661.860) * (-7658.219) (-7657.925) [-7654.747] (-7656.634) -- 0:05:27
      92000 -- (-7666.893) [-7660.924] (-7656.754) (-7656.961) * [-7652.345] (-7664.321) (-7659.160) (-7657.862) -- 0:05:35
      92500 -- (-7664.000) (-7656.941) [-7657.213] (-7664.620) * [-7659.674] (-7659.699) (-7659.811) (-7662.702) -- 0:05:33
      93000 -- (-7661.110) (-7659.028) [-7654.539] (-7669.288) * (-7659.050) [-7659.564] (-7657.794) (-7660.536) -- 0:05:31
      93500 -- (-7657.833) [-7656.167] (-7660.819) (-7667.166) * (-7658.676) (-7656.857) (-7658.514) [-7656.235] -- 0:05:29
      94000 -- (-7660.217) (-7655.963) [-7657.526] (-7657.292) * (-7656.320) (-7655.010) (-7657.114) [-7656.603] -- 0:05:27
      94500 -- [-7655.749] (-7658.173) (-7656.700) (-7664.777) * (-7659.406) (-7666.059) [-7664.434] (-7658.274) -- 0:05:25
      95000 -- [-7657.823] (-7660.413) (-7657.853) (-7663.542) * (-7660.947) (-7665.089) (-7664.228) [-7658.009] -- 0:05:33

      Average standard deviation of split frequencies: 0.000000

      95500 -- [-7659.054] (-7660.111) (-7656.737) (-7665.848) * (-7654.933) (-7667.822) (-7662.271) [-7659.862] -- 0:05:31
      96000 -- (-7663.166) (-7661.071) [-7662.058] (-7664.891) * [-7661.562] (-7657.362) (-7660.025) (-7655.941) -- 0:05:29
      96500 -- (-7658.477) (-7658.838) [-7659.141] (-7662.785) * (-7664.295) (-7656.742) [-7655.241] (-7656.064) -- 0:05:27
      97000 -- [-7657.322] (-7664.389) (-7657.773) (-7659.774) * (-7655.835) [-7653.211] (-7653.704) (-7656.080) -- 0:05:25
      97500 -- (-7657.971) [-7654.721] (-7663.903) (-7660.665) * [-7660.352] (-7659.924) (-7656.215) (-7654.462) -- 0:05:23
      98000 -- (-7658.455) (-7655.172) (-7656.657) [-7655.808] * (-7659.741) [-7658.935] (-7658.152) (-7662.709) -- 0:05:31
      98500 -- (-7657.962) (-7656.803) (-7658.257) [-7655.382] * (-7654.634) [-7660.299] (-7655.784) (-7651.139) -- 0:05:29
      99000 -- (-7663.538) [-7653.420] (-7654.715) (-7654.735) * [-7656.434] (-7659.628) (-7656.374) (-7658.158) -- 0:05:27
      99500 -- (-7660.280) (-7661.192) [-7655.692] (-7656.632) * [-7654.380] (-7663.720) (-7655.558) (-7664.672) -- 0:05:25
      100000 -- (-7662.643) (-7672.773) [-7658.828] (-7661.513) * (-7657.484) [-7662.308] (-7661.072) (-7660.083) -- 0:05:24

      Average standard deviation of split frequencies: 0.000000

      100500 -- [-7659.114] (-7659.546) (-7660.026) (-7664.789) * (-7661.509) (-7664.245) (-7658.794) [-7659.010] -- 0:05:22
      101000 -- [-7656.397] (-7658.044) (-7657.086) (-7659.999) * [-7657.011] (-7668.480) (-7657.802) (-7659.264) -- 0:05:29
      101500 -- (-7661.712) (-7660.696) (-7657.504) [-7657.083] * (-7657.276) [-7661.470] (-7654.811) (-7654.330) -- 0:05:27
      102000 -- (-7657.826) [-7656.139] (-7660.566) (-7662.980) * (-7657.007) (-7656.460) (-7657.290) [-7658.391] -- 0:05:25
      102500 -- (-7664.788) (-7660.111) (-7657.706) [-7657.286] * (-7657.118) [-7658.206] (-7663.749) (-7656.964) -- 0:05:23
      103000 -- (-7660.023) (-7659.497) [-7656.255] (-7664.622) * (-7658.567) (-7661.348) (-7662.760) [-7655.689] -- 0:05:22
      103500 -- (-7671.812) (-7657.587) (-7661.625) [-7659.959] * (-7659.083) (-7659.811) (-7663.500) [-7653.148] -- 0:05:20
      104000 -- (-7657.014) [-7652.902] (-7661.186) (-7657.077) * (-7664.594) (-7659.857) (-7657.660) [-7658.768] -- 0:05:27
      104500 -- [-7662.262] (-7658.698) (-7661.965) (-7663.907) * (-7658.559) (-7658.136) [-7658.273] (-7655.103) -- 0:05:25
      105000 -- (-7658.602) [-7656.831] (-7666.288) (-7661.315) * (-7660.045) (-7659.141) (-7655.771) [-7657.168] -- 0:05:23

      Average standard deviation of split frequencies: 0.000000

      105500 -- (-7655.865) (-7660.759) [-7661.803] (-7654.523) * [-7658.563] (-7662.500) (-7652.580) (-7661.460) -- 0:05:22
      106000 -- (-7661.204) (-7660.104) (-7668.416) [-7662.461] * (-7655.059) (-7661.418) [-7651.913] (-7659.857) -- 0:05:20
      106500 -- [-7660.052] (-7660.332) (-7668.222) (-7661.327) * (-7657.739) (-7656.185) (-7656.760) [-7657.288] -- 0:05:18
      107000 -- (-7660.095) (-7656.860) (-7660.769) [-7664.781] * (-7664.215) [-7656.091] (-7653.309) (-7656.285) -- 0:05:25
      107500 -- [-7656.131] (-7663.252) (-7660.025) (-7659.708) * [-7661.859] (-7657.574) (-7657.181) (-7655.679) -- 0:05:23
      108000 -- [-7655.062] (-7662.072) (-7658.622) (-7662.505) * (-7661.421) (-7657.606) [-7653.543] (-7653.584) -- 0:05:22
      108500 -- (-7654.908) (-7664.577) (-7664.709) [-7655.806] * [-7655.924] (-7662.351) (-7655.697) (-7656.534) -- 0:05:20
      109000 -- [-7657.715] (-7660.284) (-7660.358) (-7654.893) * (-7659.786) [-7656.500] (-7660.150) (-7655.397) -- 0:05:18
      109500 -- [-7654.115] (-7655.881) (-7668.648) (-7656.084) * (-7662.622) (-7660.206) (-7659.920) [-7654.054] -- 0:05:17
      110000 -- (-7662.756) (-7658.402) (-7657.680) [-7659.075] * (-7659.708) (-7660.236) [-7660.298] (-7657.470) -- 0:05:15

      Average standard deviation of split frequencies: 0.000000

      110500 -- [-7658.299] (-7659.666) (-7659.726) (-7661.276) * (-7659.336) (-7655.126) [-7657.294] (-7653.978) -- 0:05:21
      111000 -- (-7658.499) (-7656.623) [-7656.086] (-7654.820) * (-7655.246) (-7663.315) (-7661.048) [-7653.544] -- 0:05:20
      111500 -- (-7664.853) (-7656.286) (-7658.579) [-7657.466] * (-7653.843) (-7661.854) (-7658.065) [-7655.014] -- 0:05:18
      112000 -- (-7665.100) (-7660.580) (-7660.637) [-7659.102] * (-7653.753) (-7659.153) [-7666.180] (-7655.049) -- 0:05:17
      112500 -- (-7659.015) (-7661.875) (-7665.876) [-7658.515] * (-7663.535) [-7655.363] (-7654.158) (-7656.903) -- 0:05:15
      113000 -- (-7659.259) (-7660.663) [-7654.557] (-7663.740) * (-7657.358) [-7655.490] (-7658.611) (-7657.874) -- 0:05:13
      113500 -- (-7662.572) [-7660.179] (-7661.216) (-7666.589) * (-7662.100) (-7660.907) [-7658.335] (-7660.763) -- 0:05:20
      114000 -- [-7659.805] (-7662.180) (-7655.384) (-7663.522) * (-7659.877) (-7662.691) [-7655.390] (-7657.161) -- 0:05:18
      114500 -- (-7661.189) (-7657.322) [-7659.582] (-7657.901) * [-7656.846] (-7659.282) (-7656.265) (-7661.631) -- 0:05:17
      115000 -- (-7662.638) (-7656.401) [-7659.004] (-7660.539) * (-7662.306) (-7666.079) [-7654.799] (-7655.368) -- 0:05:15

      Average standard deviation of split frequencies: 0.000000

      115500 -- (-7658.117) [-7655.327] (-7657.887) (-7661.310) * (-7657.417) (-7662.182) (-7659.963) [-7658.931] -- 0:05:13
      116000 -- (-7662.649) [-7657.428] (-7663.505) (-7659.902) * (-7655.2