--- EXPERIMENT NOTES --- EXPERIMENT PROPERTIES #Mon Oct 31 21:36:17 WET 2016 codeml.models=0 1 2 3 7 8 mrbayes.mpich= mrbayes.ngen=1000000 tcoffee.alignMethod=CLUSTALW2 tcoffee.params= tcoffee.maxSeqs=0 codeml.bin=codeml mrbayes.tburnin=2500 codeml.dir= input.sequences= mrbayes.pburnin=2500 mrbayes.bin=mb_adops tcoffee.bin=t_coffee_ADOPS mrbayes.dir=/usr/bin/ tcoffee.dir= tcoffee.minScore=3 input.fasta=/opt/ADOPS/116/CG32165-PA/input.fasta input.names= mrbayes.params= codeml.params= --- PSRF SUMMARY Estimated marginal likelihoods for runs sampled in files "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": (Use the harmonic mean for Bayes factor comparisons of models) (Values are saved to the file /opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.lstat) Run Arithmetic mean Harmonic mean -------------------------------------- 1 -7654.75 -7664.98 2 -7654.60 -7664.00 -------------------------------------- TOTAL -7654.67 -7664.60 -------------------------------------- Model parameter summaries over the runs sampled in files "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run1.p" and "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run2.p": Summaries are based on a total of 3002 samples from 2 runs. Each run produced 2001 samples of which 1501 samples were included. Parameter summaries saved to file "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.pstat". 95% HPD Interval -------------------- Parameter Mean Variance Lower Upper Median min ESS* avg ESS PSRF+ ------------------------------------------------------------------------------------------------------ TL{all} 0.253791 0.000225 0.226957 0.286035 0.253916 1391.44 1397.20 1.000 r(A<->C){all} 0.099613 0.000208 0.072751 0.129448 0.099146 1097.67 1228.87 1.000 r(A<->G){all} 0.263201 0.000462 0.223005 0.303813 0.262845 1048.61 1110.84 1.000 r(A<->T){all} 0.122977 0.000269 0.091398 0.154550 0.122250 1154.80 1162.09 1.000 r(C<->G){all} 0.072276 0.000138 0.048338 0.094151 0.071481 1055.43 1157.28 1.001 r(C<->T){all} 0.347638 0.000613 0.302919 0.398089 0.347129 969.53 992.69 1.000 r(G<->T){all} 0.094295 0.000181 0.068905 0.121260 0.094028 1210.58 1240.48 1.000 pi(A){all} 0.240928 0.000051 0.225830 0.253815 0.240951 931.27 1133.61 1.000 pi(C){all} 0.249864 0.000052 0.235155 0.263070 0.250057 1064.48 1148.79 1.000 pi(G){all} 0.263581 0.000055 0.249605 0.278065 0.263658 995.89 1037.68 1.000 pi(T){all} 0.245627 0.000051 0.232065 0.260006 0.245679 1053.81 1078.94 1.000 alpha{1,2} 0.129326 0.005825 0.000228 0.264692 0.124955 1088.64 1138.78 1.000 alpha{3} 2.094149 0.561937 0.877404 3.593801 1.967577 1140.06 1224.43 1.000 pinvar{all} 0.081743 0.004485 0.000008 0.213950 0.065267 920.08 1134.60 1.000 ------------------------------------------------------------------------------------------------------ * Convergence diagnostic (ESS = Estimated Sample Size); min and avg values correspond to minimal and average ESS among runs. ESS value below 100 may indicate that the parameter is undersampled. + Convergence diagnostic (PSRF = Potential Scale Reduction Factor; Gelman and Rubin, 1992) should approach 1.0 as runs converge. Setting sumt conformat to Simple --- CODEML SUMMARY Model 1: NearlyNeutral -7362.032942 Model 2: PositiveSelection -7362.032942 Model 0: one-ratio -7380.041279 Model 3: discrete -7361.58339 Model 7: beta -7361.622495 Model 8: beta&w>1 -7361.622497 Model 0 vs 1 36.01667400000042 Model 2 vs 1 0.0 Model 8 vs 7 4.0000013541430235E-6
>C1 MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVPAINSQEHAELIFGCIRD IFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQPEL FSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCATYF DALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQALSE AIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDTVE NDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESAVA LIKEIRANYPELFSKVSNMNPEVFNYVQALo >C2 MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVPAINSQEHAELIFACIRD IFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQPEL FSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCATYF DALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQALSE AIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDTVE NDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSAVA LIKEISAKYPELFNKVSNMNPEVFNYVQALo >C3 MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVPAINSQEHAELIFACIRD IFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQPEL FSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCATYF DALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQALSE AIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDTVE NDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSAVA LIKEISANYPELFNKVSNMNPEVFNYVQALo >C4 MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLILDT TDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAPY LQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEIA IPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCIR DVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQPE LFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSATY FDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQALS EAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDVV ENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESAV ALIKEIRANYPEQFNQVSNANPEVFNYVQTL >C5 MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLILDT TDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAPY LQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEIA IPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCIR DVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQPE LFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSATY FDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQALS EAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDVI ENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESAV ALIKEIRANYPEQFNQVSNANPEVFNYVQTL CLUSTAL FORMAT for T-COFFEE Version_10.00.r1613 [http://www.tcoffee.org] [MODE: ], CPU=0.00 sec, SCORE=100, Nseq=5, Len=1083 C1 MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV C2 MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV C3 MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV C4 MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV C5 MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV *********.*** **:***:** **:***************:****.* C1 QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT C2 QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT C3 QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT C4 QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT C5 QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT ***::**:***:*:.*************:.**:***************** C1 VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM C2 VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM C3 VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM C4 VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM C5 VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM ** ********* :::.* **************** *********::** C1 DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV C2 DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV C3 DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV C4 DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV C5 DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV ********:* **:***:** ***************.*:*:* *:***** C1 SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL C2 SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL C3 SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL C4 SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL C5 SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL ****.********:*******.**.*** * ******:*:*:*.*:**** C1 LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL C2 LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL C3 LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL C4 LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL C5 LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL *******:***** *: *:*.: :*****:******:*****:******* C1 QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD C2 QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD C3 QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD C4 EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE C5 EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE :***:*:***:*** *::* ******** .***.**:********** *: C1 KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN C2 KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN C3 KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN C4 KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN C5 KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN *******:*********:***********************:***:**** C1 IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL C2 IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL C3 IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL C4 IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL C5 IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL *:***::****:**.***********:*******:************.** C1 VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ C2 VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ C3 VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ C4 VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ C5 VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ *:***:* *:.***************** ::*:*:*****:*****:*** C1 NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ C2 NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL C3 NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL C4 NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL C5 NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL *: :****.*:******:*** :*:*******::*******:***** * C1 RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN C2 RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN C3 RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN C4 RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN C5 RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN ********* ****:*:************************** ****** C1 LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD C2 LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED C3 LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED C4 LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLIL-D C5 LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLIL-D *********:****:************** ***::*:**:*.::** * * C1 APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP C2 AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP C3 AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP C4 TTDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAP C5 TTDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAP :.::****::******** * *****:.******::*:***:******** C1 YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI C2 YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI C3 YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI C4 YLQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEI C5 YLQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEI *****************.*** ****:**.**.**:** **.******** C1 AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVP--AINSQEHAELIFGCI C2 AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVP--AINSQEHAELIFACI C3 AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVP--AINSQEHAELIFACI C4 AIPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCI C5 AIPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCI *******::****:*.** ::** * **** * ***.********.** C1 RDIFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQP C2 RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP C3 RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP C4 RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP C5 RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP **:***:*************:* .*****:************:***::** C1 ELFSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCAT C2 ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT C3 ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT C4 ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT C5 ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT ***********:**:*****.*: *:** **::******. :*****.** C1 YFDALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQAL C2 YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQAL C3 YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQAL C4 YFDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQAL C5 YFDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQAL ***.* *:**:*::***.*:*****:****:*:******::***.***** C1 SEAIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDT C2 SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT C3 SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT C4 SEAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV C5 SEAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV ******** *.*:*************: *****.***** *******:*. C1 VENDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESA C2 VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA C3 VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA C4 VENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA C5 IENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA :***:*********:****** *******.****: **:**** ***:** C1 VALIKEIRANYPELFSKVSNMNPEVFNYVQALo C2 VALIKEISAKYPELFNKVSNMNPEVFNYVQALo C3 VALIKEISANYPELFNKVSNMNPEVFNYVQALo C4 VALIKEIRANYPEQFNQVSNANPEVFNYVQTL- C5 VALIKEIRANYPEQFNQVSNANPEVFNYVQTL- ******* *:*** *.:*** *********:* PROGRAM: T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427) -full_log S [0] -genepred_score S [0] nsd -run_name S [0] -mem_mode S [0] mem -extend D [1] 1 -extend_mode S [0] very_fast_triplet -max_n_pair D [0] 10 -seq_name_for_quadruplet S [0] all -compact S [0] default -clean S [0] no -do_self FL [0] 0 -do_normalise D [0] 1000 -template_file S [0] -setenv S [0] 0 -template_mode S [0] -flip D [0] 0 -remove_template_file D [0] 0 -profile_template_file S [0] -in S [0] -seq S [0] -aln S [0] -method_limits S [0] -method S [0] -lib S [0] -profile S [0] -profile1 S [0] -profile2 S [0] -pdb S [0] -relax_lib D [0] 1 -filter_lib D [0] 0 -shrink_lib D [0] 0 -out_lib W_F [0] no -out_lib_mode S [0] primary -lib_only D [0] 0 -outseqweight W_F [0] no -dpa FL [0] 0 -seq_source S [0] ANY -cosmetic_penalty D [0] 0 -gapopen D [0] 0 -gapext D [0] 0 -fgapopen D [0] 0 -fgapext D [0] 0 -nomatch D [0] 0 -newtree W_F [0] default -tree W_F [0] NO -usetree R_F [0] -tree_mode S [0] nj -distance_matrix_mode S [0] ktup -distance_matrix_sim_mode S [0] idmat_sim1 -quicktree FL [0] 0 -outfile W_F [0] default -maximise FL [1] 1 -output S [1] score_ascii html score_ascii -len D [0] 0 -infile R_F [1] /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln -matrix S [0] default -tg_mode D [0] 1 -profile_mode S [0] cw_profile_profile -profile_comparison S [0] profile -dp_mode S [0] linked_pair_wise -ktuple D [0] 1 -ndiag D [0] 0 -diag_threshold D [0] 0 -diag_mode D [0] 0 -sim_matrix S [0] vasiliky -transform S [0] -extend_seq FL [0] 0 -outorder S [0] input -inorder S [0] aligned -seqnos S [0] off -case S [0] keep -cpu D [0] 0 -maxnseq D [0] 1000 -maxlen D [0] -1 -sample_dp D [0] 0 -weight S [0] default -seq_weight S [0] no -align FL [1] 1 -mocca FL [0] 0 -domain FL [0] 0 -start D [0] 0 -len D [0] 0 -scale D [0] 0 -mocca_interactive FL [0] 0 -method_evaluate_mode S [0] default -evaluate_mode S [1] t_coffee_fast -get_type FL [0] 0 -clean_aln D [0] 0 -clean_threshold D [1] 1 -clean_iteration D [1] 1 -clean_evaluate_mode S [0] t_coffee_fast -extend_matrix FL [0] 0 -prot_min_sim D [40] 40 -prot_max_sim D [90] 90 -prot_min_cov D [40] 40 -pdb_type S [0] d -pdb_min_sim D [35] 35 -pdb_max_sim D [100] 100 -pdb_min_cov D [50] 50 -pdb_blast_server W_F [0] EBI -blast W_F [0] -blast_server W_F [0] EBI -pdb_db W_F [0] pdb -protein_db W_F [0] uniprot -method_log W_F [0] no -struc_to_use S [0] -cache W_F [0] use -align_pdb_param_file W_F [0] no -align_pdb_hasch_mode W_F [0] hasch_ca_trace_bubble -external_aligner S [0] NO -msa_mode S [0] tree -master S [0] no -blast_nseq D [0] 0 -lalign_n_top D [0] 10 -iterate D [1] 0 -trim D [0] 0 -split D [0] 0 -trimfile S [0] default -split D [0] 0 -split_nseq_thres D [0] 0 -split_score_thres D [0] 0 -check_pdb_status D [0] 0 -clean_seq_name D [0] 0 -seq_to_keep S [0] -dpa_master_aln S [0] -dpa_maxnseq D [0] 0 -dpa_min_score1 D [0] -dpa_min_score2 D [0] -dpa_keep_tmpfile FL [0] 0 -dpa_debug D [0] 0 -multi_core S [0] templates_jobs_relax_msa_evaluate -n_core D [0] 0 -max_n_proc D [0] 0 -lib_list S [0] -prune_lib_mode S [0] 5 -tip S [0] none -rna_lib S [0] -no_warning D [0] 0 -run_local_script D [0] 0 -plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.alnplugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] plugins S [0] default -proxy S [0] unset -email S [0] -clean_overaln D [0] 0 -overaln_param S [0] -overaln_mode S [0] -overaln_model S [0] -overaln_threshold D [0] 0 -overaln_target D [0] 0 -overaln_P1 D [0] 0 -overaln_P2 D [0] 0 -overaln_P3 D [0] 0 -overaln_P4 D [0] 0 -exon_boundaries S [0] -dump S [0] no -display D [0] 100 INPUT FILES Input File (S) /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Format clustal_aln Input File (M) proba_pair Identify Master Sequences [no]: Master Sequences Identified INPUT SEQUENCES: 5 SEQUENCES [PROTEIN] Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C1 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C2 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C3 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C4 Length 1081 type PROTEIN Struct Unchecked Input File /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln Seq C5 Length 1081 type PROTEIN Struct Unchecked Multi Core Mode: 72 processors: --- Process Method/Library/Aln S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln --- Process Method/Library/Aln Mproba_pair xxx Retrieved S/opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln xxx Retrieved Mproba_pair All Methods Retrieved MANUAL PENALTIES: gapopen=0 gapext=0 Library Total Size: [21764] Library Relaxation: Multi_proc [72] Relaxation Summary: [21764]--->[21760] UN-WEIGHTED MODE: EVERY SEQUENCE WEIGHTS 1 OUTPUT RESULTS #### File Type= MSA Format= score_ascii Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii #### File Type= MSA Format= html Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.html #### File Type= MSA Format= score_ascii Name= input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.score_ascii # Command Line: t_coffee_ADOPS -infile /opt/ADOPS/116/CG32165-PA/batch/allfiles/tcoffee/input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln -output score_ascii -special_mode evaluate -evaluate_mode t_coffee_fast [PROGRAM:T-COFFEE] # T-COFFEE Memory Usage: Current= 29.468 Mb, Max= 31.304 Mb # Results Produced with T-COFFEE Version_10.00.r1613 (2013-10-22 15:49:04 - Revision 1613 - Build 427) # T-COFFEE is available from http://www.tcoffee.org # Register on: https://groups.google.com/group/tcoffee/ >C1 MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVP--AINSQEHAELIFGCI RDIFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQP ELFSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCAT YFDALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQAL SEAIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDT VENDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESA VALIKEIRANYPELFSKVSNMNPEVFNYVQALo >C2 MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVP--AINSQEHAELIFACI RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQAL SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA VALIKEISAKYPELFNKVSNMNPEVFNYVQALo >C3 MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVP--AINSQEHAELIFACI RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQAL SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA VALIKEISANYPELFNKVSNMNPEVFNYVQALo >C4 MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLIL-D TTDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAP YLQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEI AIPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCI RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT YFDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQAL SEAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV VENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA VALIKEIRANYPEQFNQVSNANPEVFNYVQTL- >C5 MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLIL-D TTDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAP YLQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEI AIPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCI RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT YFDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQAL SEAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV IENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA VALIKEIRANYPEQFNQVSNANPEVFNYVQTL- FORMAT of file /tmp/tmp7942645057944739868aln Not Supported[FATAL:T-COFFEE] >C1 MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVP--AINSQEHAELIFGCI RDIFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQP ELFSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCAT YFDALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQAL SEAIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDT VENDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESA VALIKEIRANYPELFSKVSNMNPEVFNYVQALo >C2 MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVP--AINSQEHAELIFACI RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQAL SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA VALIKEISAKYPELFNKVSNMNPEVFNYVQALo >C3 MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVP--AINSQEHAELIFACI RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQAL SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA VALIKEISANYPELFNKVSNMNPEVFNYVQALo >C4 MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLIL-D TTDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAP YLQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEI AIPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCI RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT YFDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQAL SEAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV VENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA VALIKEIRANYPEQFNQVSNANPEVFNYVQTL- >C5 MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLIL-D TTDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAP YLQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEI AIPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCI RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT YFDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQAL SEAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV IENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA VALIKEIRANYPEQFNQVSNANPEVFNYVQTL- input.fasta.prot.fasta.clustalw2_rs_0_0.fasta.aln I:1083 S:99 BS:1083 # TC_SIMILARITY_MATRIX_FORMAT_01 # SEQ_INDEX C1 0 # SEQ_INDEX C2 1 # SEQ_INDEX C3 2 # SEQ_INDEX C4 3 # SEQ_INDEX C5 4 # PW_SEQ_DISTANCES BOT 0 1 91.40 C1 C2 91.40 TOP 1 0 91.40 C2 C1 91.40 BOT 0 2 91.40 C1 C3 91.40 TOP 2 0 91.40 C3 C1 91.40 BOT 0 3 83.97 C1 C4 83.97 TOP 3 0 83.97 C4 C1 83.97 BOT 0 4 83.78 C1 C5 83.78 TOP 4 0 83.78 C5 C1 83.78 BOT 1 2 99.26 C2 C3 99.26 TOP 2 1 99.26 C3 C2 99.26 BOT 1 3 84.80 C2 C4 84.80 TOP 3 1 84.80 C4 C2 84.80 BOT 1 4 84.15 C2 C5 84.15 TOP 4 1 84.15 C5 C2 84.15 BOT 2 3 84.89 C3 C4 84.89 TOP 3 2 84.89 C4 C3 84.89 BOT 2 4 84.15 C3 C5 84.15 TOP 4 2 84.15 C5 C3 84.15 BOT 3 4 95.47 C4 C5 95.47 TOP 4 3 95.47 C5 C4 95.47 AVG 0 C1 * 87.64 AVG 1 C2 * 89.90 AVG 2 C3 * 89.93 AVG 3 C4 * 87.28 AVG 4 C5 * 86.89 TOT TOT * 88.33 CLUSTAL W (1.83) multiple sequence alignment C1 ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGACCATAGACAC C2 ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGGCCATGGACAC C3 ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGGCCATGGACAC C4 ATGGAGGCAGCTATTCTGGACATAATCAGCGGGATCCTGGGCACGGACAC C5 ATGGAGGCAGCTATTTTGGACATAATCAGCGGGATCCTGGGCATGGACAC *************** **** *******.**********. ** .***** C1 GGAACGAATCCGTGAGTCCACAGCCAAGATGCTAAAGGCCTACGAGAATC C2 GGACCGAATCCGTGAGTCCACAGACAAGATGTTAAAGGCCTATGAGAATC C3 GGAACGAATCCGTGAGTCCACAGACAAGATGTTAAAGGCCTATGAGAATC C4 GGAGCGGATTCGTCAGTCAACAGCCAAGATGATGAAGGCCTACGAGAATC C5 GGAACGGATTCGTCAGTCAACAGCCAAGATGATGAAGGCCTACGAGAATC *** **.** *** ****.****.******* *.******** ******* C1 CCGATTCTCTGCTGGTTCTCACCCAGATCGTGATGTCGGACAGGCCGGTC C2 CAGATTCTCTGCTGGTTCTCACCCAGATCATAATGTCGGACAGGCCGGTC C3 CAGATTCTCTGCTGGTTCTCACCCAGATCATAATGTCGGACAGGCCGGTC C4 CCGATTCTCTGCTGGTTCTCACCCAGATTGTGATGTCGGACAGGGCGGTC C5 CCGATTCACTGCTGGTTCTCACCCAGATCGTGATGTCGGACCGGGCGGTC *.*****:******************** .*.*********.** ***** C1 CAAGAGCGGCAGGTCGCCGCCGTGCTCCTCAAGAGGCGGGTCAAAAAGTT C2 CAGGAGCGGCAGGTCGCCGCCGTGCTCCTCAAAAGGCGGGTCAAAAAGTT C3 CAGGAGCGGCAGGTCGCCGCCGTGCTCCTCAAAAGGCGGGTCAAAAAGTT C4 CAGGAACGGCATATCGCCGCTATGCTTCTCAAGAAGCGGATCAGCAAGTT C5 CAGGAGCGGCATGTCGCCGCCGTGCTCCTCAAGAGGCGGATCAGCAAGTT **.**.***** .******* .**** *****.*.****.***..***** C1 ACGCCACTGGCAGTTGGTTCCCGCCGAGCACCAGGCAGCAATCAAATCGA C2 GCGCCACTGGCAGTTGGTTCCCGCCGAGCACCAAGCAGCAATTAAATCGA C3 GCGCCACTGGCAGTTGGTTCCCGCCGAGCACCAAGCAGTAATTAAATCGA C4 GCGCCACTGGCAGTTGGTTCCCGCCGAGCATCAGGCCGCAATTAAAACGA C5 GCGCCACTGGCAGTTGGTTCCCGCCGAGCATCAGTCAGCAATTAAAACGA .***************************** **. *.* *** ***:*** C1 ACATGCTACAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG C2 ACATGCTGCAGGTCCTTATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG C3 ACATGCTGCAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG C4 ACATGCTTCAGGTCCTTATTGCGGTGAAGGAAAAGACGGTGAAGGGCACG C5 ACATGCTTCAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG ******* ******** ** ***************** ************ C1 GTGGCCTTTATAATTGGATCGCTGGTGCGCCACGAGGAGGGCGAGCAAAA C2 GTGGCCTTTATAATTGGATCGCTGGTTCGCCACGAGGAGGAAAAGCAAAA C3 GTGGCCTTTATAATTGGATCGCTGGTGCGCCACGAGGAGGAAAAGCAAAA C4 GTGGCCCAGATAATTGGATCGCTGGTGCGCCACGAGGCGGAAAAGGAACA C5 GTAGCCCAGATAATTGGATCGCTGGTGCGACACGAGGCGGAGAAGGAACA **.*** : ***************** **.*******.**. .** **.* C1 CTCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGCC C2 CTCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC C3 CCCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC C4 TTCCTGGATGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC C5 CTCCTGGTTGGAGGAAATACTGAAGTTCATTTACGAACGTTGCAGCAGTC *****: ****************** ******************** * C1 CCGATCCAATAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCTCGCTCATG C2 CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCACGCTCATG C3 CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCACGCTCATG C4 CCGATCCAACAGAAAGCGAGCGCGGCAGCTCAATCTTTACCACGCTCATG C5 CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTACCACACTCATG ********* ************ ***************:**:*.****** C1 GACGCTGCTCCCGATCAGTTTTCGGACCACACGGATACTATGTTCCCATT C2 GACGCTGCTCCCGATCAGTTTTCGAACCACACGGATACTATCTTCCCGTT C3 GACGCTGCTCCCGATCAGTTTTCGAACCACACGGATACTATCTTCCCGTT C4 GACGCTGCTCCCGATCAGTTTTCGAACCACATGGATACTATCTTCCCGCT C5 GACGCTGCTCCCGATCAGTTTTCGAACCACATGGATACTATCTTCCCGTT ************************.****** ********* *****. * C1 GCTTGCCGGCATTCTAGTTACCGCCGAGGCGAATGGGAACATGGCCACAC C2 GCTTGCCGGCACTCTAGTAACCGCCGAGGCGAATGGGAACATGGCCACAC C3 GCTTGCCGGCACTCTAGTAACCGCCGAGGCGAATGGGAACATGGCCACAC C4 GTTCGCCGGCGTTCTAGTAACCGCAGAGGCGAACGGTAACATGGCCACAC C5 GTTCGCCGGCGTTCTGGTAACCGCCGAGGCGAACGGTAACATGGCCACAC * * ******. ***.**:*****.******** ** ************* C1 CCACCGTGCATAACATGCTGACCGGTTCATGCTTCTTGTTGCCTTTCGTA C2 CCACCGTGCATAACATGCTGGCGGGTATATGCTTCCTGTTGCCTTTCGTC C3 CCACCGTGCATAACATGCTGGCGGGTATATGCTTCCTGTTGCCTTTCGTC C4 CCACCGTGTTTAACATGCTGGCGGGTACGTGCTACCTCCTGCCCTTCGTT C5 CCACCGTGTTTAACGTGCTGACGGGTACGTGCTACCTCCTGCCCTTCGTC ******** :****.*****.* ***: .****:* * **** ***** C1 AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT C2 AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT C3 AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT C4 AGCGGTCATAGTGGTGCTGAGCAGATTGTGGTTAAGGCTATACCGCTAAT C5 AGTGGACATAGTGGTGCTGAGCAGATTGTTGTTAAGGCTGTGCCGCTAAT ** **:******..*************** *********.*.*****.** C1 ACTCAAGGCCCTGGCCGCCTTTGTCGAAAAGGGGTACAGTATTGAGTTCA C2 TCTCAAGGCCCTGGGCGCCTTCGCCGAAAAGGGGGACAGTAATGAGTTTA C3 TCTCAAGGCCCTGGGCGCCTTCGCCGAAAAGGGGGACAGTAATGAGTTCA C4 TCTCAAGGCCCTAGGCGCCTTCGCCGAAAAGGGGGATAGTCAGGAGTTCA C5 TCTCAAGGCCCTAGGCGCCTTCGCCGAAAAGGGGGACAGTCAGGAGTTCA :***********.* ****** * ********** * ***.: ***** * C1 TGGGTGCCTTTGATATCATCGACAGCATGGCCGAGCATGTGCCCCACTTG C2 TGGGTGCCTTTGATATCATGGACAGCATGGCCGAGTATGTGCCGCACTTG C3 TGGGTGCCTTTGATATCATGGACAGCATGGCCGAGTATGTGCCGCACTTG C4 TGGGTGCTTTTGATATCATAGACGCCATGGGCGAGTATGTGCCACACTTA C5 TGGGAGCTTTTAATATCATAGACGCCATGGGCGAGTATGTGCCCCATTTG ****:** ***.******* ***. ***** **** ******* ** **. C1 CTGACCGGTAATGTGAAGCTGCTTCTGGAGTTTTGTCTGATGATTGCGAG C2 CTGACCGGCAATGTGAAGCTAATTCTGGAGTTTTGTCTGACGATTTCGAG C3 CTGACCGGCAATGTGAAGCTAATTCTAGAGTTTTGTCTGACGATTGCGAG C4 CTGACTGGTAATGTGAAGCTGATTTTGGAGTTTTGTCTGGTGATTGCGAG C5 CTGACCGGTAATGTGAAGCTGATTCTGGAGTTCTGTCTGATAATTGCGAG ***** ** ***********..** *.***** ******. .*** **** C1 AAACAAGCAGTTCGACGCTTCGATTCGGGTTCAGGTGCTTACCTTTGTAG C2 AAACAAGCAGGTCGACGCTGCGATTCGGGTTCAGGTGATTACCTTTGTGG C3 AAACAAGCAGGTCGACGCTGCGATTCGGGTTCAGGTGATTACCTTTGTGG C4 CAATCAGCAGCTCGAGGATTCGATTCGAGTTCAGGTGATTACCTTTGTGG C5 CAACCAGCAGCTCGAGGATTCGATTCGAGTTCAGGTGATTACCTTTGTTG .** .***** **** *.* *******.*********.********** * C1 GCAGCCTAGTTCGCCTCAAGAAGAAAATTATTATGAAGCAGAAACTACTA C2 GCAGCCTAATTCGCCTCAAGAAGAAGATTATTATGAAGCAGAAACTACTC C3 GCAGCCTAATTCGCCTCAAGAAGAAGATTATTATGAAGCAGAAACTACTC C4 GCAGCCTAATGCGCCTGAAAAAGAAGGTTATTATGAAGCAGAAGCTGCTG C5 GCAGCCTAATGCGCCTTAAGAAGAAGGTTATTATGAAGCAGAAACTGCTG ********.* ***** **.*****..****************.**.** C1 CAGCCCACACTATCTGTTCTTTTCGAAGTGATTTGCCAGGACGACCTCGA C2 CAGCCCACTCTATCGGTTATTTTCGAAGTGATTTGCCAGGACGTCCTTGA C3 CAGCCCACTCTATCGGTTATCTTCGAAGTGATTTGCCAGGACGTCCTTGA C4 GAGCCCACACTAGCGGTTATGTTCGAAGTGATGTGCCAGGACCCACTTGA C5 GAACCCACTCTTGCGGTTATGTTCGAAGTGATGTGCCAGGACTCCCTTGA *.*****:**: * ***.* *********** ********* .** ** C1 GGAAGGTGACGATGATTACTTTTCCTCGGAGAGCCTGAGTAGTCCATCCA C2 CGATGGTTACGATGATTACTTTTCCTCGGAGAGCCTGAATAGCCCATCCA C3 CGATGGTTACGATGATTACTTTTCCTCGGAGAGCCTGAATAGCCCATCCA C4 TGACGGTTACGATGATTACTTTTCGTCAGAGAGCTCGAATAGCCCGTCCA C5 TGATGGTTACGATGATTACTTTTCGTCTGAGAGCTCGAATAGCCCGTCCA ** *** **************** ** ****** **.*** **.**** C1 ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC C2 ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC C3 ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC C4 ATGCAGCTACGCAGACTCTGGACTTGATGGCCCTCCACATGGCGCCGGAG C5 CTGCAGCTACGCAGACTCTGGACTTGATGGCCCTCCACATGTCGCCGGAG .*******.*******:****** ********** ****** ****** C1 AAGTTTATTCCGCCACTACTGGATTTGCTGGAGCCTGCGTTGCAGAGCCC C2 AAGTTTATTCCGCCACTACTGGAATTGCTGGAGCCTGCGTTGCAGAGCCC C3 AAGTTTATTCCGCCACTACTGGAATTGCTGGAGCCTGCGTTGCAGAGCCC C4 AAGTTTATTCCGCCACTACTGCAGCTGCTGGAGCCTGCGTTGCAGAGCCC C5 AAGTTTATTCCGCCACTACTGCAGCTGTTGGAGCCAGCGTTGCAGAGCCC ********************* * ** *******:************** C1 GGAACCTGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTTATTGCCG C2 GGAACCTGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTCATTGCTG C3 GGAACCCGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTCATTGCCG C4 GCAGCCCGTGCTTCGTCGTTCCTCTTTTATTTGCATGGGAGTCATTGCCG C5 ACAACCTGTGCTTCGCCGCTCCTCTTTTATTTGTATGGGCGTCATTGCCG . *.** ******** ** ************** *****.** ***** * C1 AGGGCTGTTCCGAGGCCATTGGGAAAAAGTATCTCGAGGTCATGCTAAAT C2 AGGGCTGCTCCGAGGCCATTGGGAAAAAGTATCTGCAGGTCATGCTAAAT C3 AGGGCTGCTCCGAGGCCATTGGGAAAAAGTATCTGCAGGTCATGCTAAAT C4 AGGGCTGCTCCGAGGCCATTGGGAACAAGTATCTGGAGGTCATGCTAAAT C5 AGGGCTGCTCCGAGGCCATTGGGAACAAGTATCTGGAGGTCATGCTGAAT ******* *****************.******** **********.*** C1 ATCATCAAAGCTGGAGTGTTGGACTCTGTTATGTTCGTGCGGACCGCCGC C2 ATCATCAAAGCTGGAGTTTTGGACTCTGTTATGTTGGTGCGGACCGCTGC C3 ATCATCAAAGCTGGAGTTTTGGATTCTGTTATGTTGGTGCGGACCGCCGC C4 ATTGTCAAAGCTGGAATTTTTGACTCTGTTATGTTGGTGCGGGTCGCCGC C5 ATCGTCAAAGCTGGAATTTTCGACTCTGTTATGTTGGTGCGGGTCGCCGC ** .***********.* ** ** *********** ******. *** ** C1 ATTCTTCGCCCTCGGTCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA C2 ATTCTTCGCCCTTGGCCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA C3 ATTCTTCGCCCTCGGCCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA C4 ATTCTTCGCTCTTGGACAGTTTTCCGAGTATCTTCAGCCCACAATCTGCA C5 ATTCTTCGCCCTTGGACAGTTTTCCGAGTATCTTCAGCCGACAATCTGCA ********* ** ** *************:********* **.******* C1 AGTTTGCTCCCCAAATTCTACCCGTGTTGTTCGACTATCTAAACCAGCTG C2 AGTTTGCTCCTCAAATTCTTCCCGTGCTGTTTGACTATCTAAGCCAGCTG C3 AGTTTGCTCCTCAAATTCTTCCCGTGCTGTTTGACTATCTAAGCCAGCTG C4 AGTTTGCTCCCCAGATTCTTCCCGTGTTGTTCGATTATCTGAGCCAGCTG C5 AGTATGCTCCCCAGATTCTTCCCGTGCTGTTCGACTATCTGAGCCAGCTG ***:****** **.*****:****** **** ** *****.*.******* C1 GTACTGGAACTCAAGGTTGGTGAGCCGGATTCGAAACATATGGATCGTAT C2 GTAATGGAACTCAAGATTGGTACGCCTAATCCGAAACATATGGATCGTAT C3 GTAATGGAACTCAAGATTGGTACGCCTAATCCGAAACATATGGATCGTAT C4 GTAATGGAACTCAAGATTGGTACGCCGGAACCGAAACACATGGATCGTAT C5 GTAATGGAACTCAAGATTGGTACGCCGGAACCGAAACACATGGATCGTAT ***.***********.*****..*** .*: ******* *********** C1 GTTTTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGATATTGTTC C2 GTTCTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGAAATTGTTC C3 GTTCTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGAAATTGTTC C4 GTTCTATGCCTTGGAGACCTTTTGCGAGAACCTGGAGGACGACATCGTTC C5 GTTCTATGCCTTGGAGACCTTTTGCGAGAATCTGGGGGATGACATTATTC *** ****** ******************* ****. ** ** ** .*** C1 CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG C2 CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG C3 CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG C4 CCCATTTACCCACGCTGATGGATCGCCTGTTTGGGGTTCTGGAACCCCAG C5 CCCATTTACCTACGCTGATGGAGCGTCTGTTTGGGGTTCTGGAACCCCAG * ******* **.** ***** ** ************.******* *** C1 AACTCAAATCAAATGCGTGAAATGGCTTTGTCGGCCATAGCAGCGGTGTC C2 AACACGAATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTGTC C3 AACACGAATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTGTC C4 AACTCGTATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTCTC C5 AACTCGCATCGAATGCGTGAAATGGGTTTGACGGCCATAGCAGCGGTCTC ***:*. ***.************** ****:**************** ** C1 AGCAGCAGCTAAGGAAAACCTGATGCCATATTTCCCCAGGATCATGACCG C2 AACAGCAGCTAAGGAACACCTGATGCCATATTTCCCCAGGATCATGACCG C3 AACAGCAGCTAAGGAACACCTGATGCCATATTTCCCCAGGATCATGACCG C4 AACCGCAGCTAAGGTACACTTGATGCCCTATTTCCCCAGGATCATGAGCA C5 AACCGCAGCTAAAGAACACCTGGTGCCCTATTTCCCTAGGATCATGAGTG *.*.********.*:*.** **.****.******** ********** . C1 TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCAG C2 TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCTC C3 TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCTC C4 TACTACAGGGCTGTCTGGTGAAGGAGTGCCCAAAGGAAATGCAAAGTCTG C5 TACTACAGGGCTGTCTGGTGAAGGAGTGCCCAAAAGAAATGCAAAGTCTG ************************* ********.****** *.****: C1 CGCATCCAAGCTATCGACACTCTGGCCGCGCTGTGTCGCGAATTGGGCAA C2 CGCATCCAAGCTATCGACACTCTGGCCGAGCTCTGTCGCGAAGTGGGCAA C3 CGCATCCAAGCTATCGACACTCTGGCCGAGCTCTGTCGCGAAGTGGGCAA C4 CGCATCCAAGCTATCGACACTCTGGCCGCGCTCTGTCGCGAAGTGGGCAA C5 CGCATCCAAGCTATCGACACTCTGGCCGCGCTCTGTCGCGAAGTGGGCAG ****************************.*** ********* ******. C1 GGATAATATTATTCCTCTTGCCGACGATACAATGAACTTCTGCCTGATGA C2 AGATAATATTATTCCGCTTGCCGACGATACAATGAATTTCTGTCTGATGA C3 AGATAATATTATTCCGCTTGCCGACGATACAATGAATTTCTGTCTGATGA C4 GGATAATATTATTCCGCTTGCCGACGATACAATGAACTTCTGTCTGATGA C5 GGATAATATTATTCCGCTTGCCGACGATACAATGAACTTCTGTCTGATGA .************** ******************** ***** ******* C1 TGCTGGAAGACGGTCCGGATGATCCCGAGTACCGCAGGAGTATATACAAC C2 TGCTAGAAGATGGTCCGGATGATCCCGAGTTCCGCAGGAGTATATACAAC C3 TGCTAGAAGATGGTCCGGATGATCCCGAGTTCCGCAGGAGTATATACAAC C4 TGCTGGAAGATGGTCCGGACGATCCTGAGTTCCGCAGGAGCATCTACAAC C5 TGTTGGAAGATGGTCCGGACGATCCCGAAGTCCGCAGGAGCATATACAAC ** *.***** ******** ***** **. :********* **.****** C1 CTGATGTCCTCCCTGTCATCAGTTGTCAACGAGAGCATGGCCAGTGTGTT C2 CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCAGTGTGTT C3 CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCAGTGTGTT C4 CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCTCTGTGTT C5 CTGATGTCCTCCCTGTCATCAGTTGTCAAAGAGAGCATGGCCACTGTGTT ********************.********.************: ****** C1 CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTTTTCGGAGGACA C2 CCCCAAGTTCATTGATCGCATAATGGAATCTGTGATTTCATCGGAGGACA C3 CCCCAAGTTCATTGATCGCATAATGGAATCTGTGATTTCTTCGGAGGACA C4 CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTCTTCGGAGGACG C5 CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTCTTCGGAGGACG ***************************.********** :*********. C1 TGGTGCCAAATGTGTCGGACAATGCGGACGATGATTTGGCCCTAGTAGAT C2 TGGTGCCAAATGTGTCGGACAATGCGGAGGATGATTTGGCCCTAGAAGAT C3 TGGTGCCAAATGTGTCGGACAATGCGGAGGATGATTTGGCTTTAGAAGAT C4 TGTTGCCACATGTTTCGGACAATGCGGAGGAAGATTTGATCCTG---GAT C5 TGTTGCCAAATGTGTCAGAGAATCCAGAGGATGATTTGATCCTG---GAT ** *****.**** **.** *** *.** **:******. *. *** C1 GCCCCCGACATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA C2 GCCGCCAATATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA C3 GCCGCCAATATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA C4 ACGACCGATGTAGAGATTGATTTAGATCAAACAGACGACGAAGACGACCA C5 ACAACCGATGTAGAGATTGATTTAGATCAAACAGATGACGAAGATGACCA .* **.* .**************** **.***** ******** ***** C1 AGACGCTTACCCGGTGGAGAATGATTATATCGTCGAAAAGGAGGAGGCCA C2 AGACGCTTACCTGGTGGAGAATGATTATATCATTGAAAAGGAGGAGGCCA C3 AGACGCTTACCTGGTGGAGAATGATTATATCATTGAAAAGGAGGAGGCCA C4 AGACGGCTACCAGGTGGAGAATGATTACGTTATTGAGAAGGAGGAGGCTA C5 AGACTGCTACCAGGTGGAGAACGATTACGTTTTTGAGAAGGAGGAGGCTA **** **** ********* ***** .* * **.*********** * C1 TTCTGTCACTCAAGGAGTTTGCTACCCATACCGGCGCCGCCTTCGCGCCC C2 TTATGTCACTCAAGGAGTTTGCTACCCATACGGGCGCCGCCTTTGCGCCC C3 TTATGTCACTCAAGGAGTTTGCTACCCATACGGGCGCCGCCTTTGCGCCC C4 TTATGGCACTTAAGGAGTTTGCTGCACACACGGGCGCCGCCTTTGCACCC C5 TTCTGGCACTTAGGGAGTTCGCTGCACATACGGGCGCCGCCTTCGCGCCC **.** **** *.****** ***.*.** ** *********** **.*** C1 TATTTGCAATCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA C2 TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA C3 TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA C4 TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA C5 TACTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA ** *****.***************************************** C1 AGGCGACGTTCGTATGGCATGTATTGACTCCATTTGCTCGTTCATTACGG C2 GAGCGACGTTCGTATGGCGTGCATTGACTCCATCTGCGCGTTCATTACGG C3 GAGCGACGTTCGTATGGCGTGCATTGACTCCATCTGCGCGTTCATTACGG C4 GGACGACGTCCGTAAGGCGTGCATTGACGCCATTTGCGGATTCATTGTGG C5 GGGCGACGTCCGTAAGGCGTGCATTGACGCCATTTGCGGGTTCATTACGG ...****** ****:***.** ****** **** *** .******. ** C1 CTCTCCACAAGTTGGATGATGCCGCCGGCCTGAAGCGCGCCTGCGAGATT C2 CTCTCCACAAGTTGGATGATGCCGTCGGCCTGAAACGCGCCTGCGAGATT C3 CTCTCCACAAGTTGAATGATGCCGTCGGCCTGAAGCGCGCCTGCGAGATT C4 CTCTCTACAAGTTGGGAGATGCCGCCGGCTTGAAGCGCGCCTGCGAGATT C5 CTCTCCATAAGTTGGAAGATGCCGCCGGCTTGAAGCGCGCCTGCGAGATT ***** * ******..:******* **** ****.*************** C1 GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGCGGT C2 GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGGGGT C3 GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGGGGT C4 GCCATTCCAAAGTTTGCACATATGATGCGCACTGACGACGAGGTTGGGGT C5 GCCATTCCAAAGTTTGCACATATGTTGCGCACTGACGACGAGGTTGGGGT ***********************.:******* ****** ****** *** C1 CGTACTCCGCATGCTTGACGTCCTCTACGATGTCTTCAAGTACGTGCCG- C2 CGTAAACCACTTGCTTGACGCCCTCTACGATGTCTTCAAGAACGTGCCG- C3 CGTAAACCACTTGCTTGACGTCCTCTACGATGTCTTCAAGAACGTGCCG- C4 CGTACTCCATCTGCTTGACGTACTCGGCGATGTCTTCAAGGATGTCCAGT C5 CGTACTCCATCTGCTTGACGAACTCGGCGATGTCTTCAAGGATGTCCAGT ****.:**. ********* .*** .************* * ** *.* C1 -----GCGATAAACAGCCAGGAGCACGCCGAACTTATATTCGGTTGCATC C2 -----GCGATAAACAGCCAAGAGCACGCCGAACTAATTTTCGCTTGCATC C3 -----GCGATTAATAGCCAAGAGCACGCCGAACTAATTTTCGCTTGCATC C4 TGCAGGCAATAAACAACCAGGAGCACGCCGAACTAATTTTCGGATGCATT C5 TGCAGGCAATAAACAACCAGGAGCATGCCGAACTAATTTTCGGGTGCATC **.**:** *.***.***** ********:**:**** ***** C1 AGGGACATCTTCACAAATAAAATGGCCTGTCAGTTTAACGAGGAGAGCGG C2 AGGGACATTTTCACAAATGAAATGGCCTGCCAGTTTAACGAGGAGAGCGG C3 AGGGACATTTTCACAAATGAAATGGCCTGCCAGTTTAACGAGGAGAGCGG C4 CGGGACGTCTTCACAAATAAGATGGCCTGTCAGTTTAACGAAGAGAGCGG C5 CGCGACGTCTTCACAAATAAAATGGCCTGTCAGTTTAACGAGGAGAGCGG .* ***.* *********.*.******** ***********.******** C1 CGGCGGAGATGATGAGTGTTCGGAGGAAAGCGAGAACGACGAGATGCTGT C2 CGGCGGAGATGATGAGTATCCGGAGGAAAGCGAGAACGAAGAGATGCTGT C3 CGGCGGAGATGATGAGTATCCGGAGGAAAGCGAGAACGAAGAGATGCTGT C4 CGGTGGAGATGAGGAGGACTCGGAGGAAAGCGAGAACGACGAGATGCTGT C5 TGGTGGAGATGAGGAGGATTCGGAGGAAAGCGAGAACGACGAAATGCTGT ** ******** *** . *******************.**.******* C1 TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCCTTCAGCCG C2 TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCATTCAGCCG C3 TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCATTCAGCCG C4 TCGAGAACGCTGCCAATCTGTTCCCCTTGTTTGGCTTGGCCCTTCAGCCG C5 TCGAGAACGCTGCCAATCTGTTCCCTTTGTTTGGCTTAGCCCTTCAGCCG ************************* :**********..**.******** C1 GAGCTGTTCTCGCTTTATTTTGGACGCCTTTACCATTTCTATATTCAAAG C2 GAGCTGTTCTCGCTTTATTTCGGACGCCTTTACCATTTCTATATTCAAAG C3 GAGCTGTTCTCGCTTTATTTCGGACGCCTTTACCATTTCTATATTCAAAG C4 GAGTTGTTCTCTCTTTATTTCGGACGCCTTTACCAATTTTATGTTCAAAG C5 GAGTTGTTCTCGCTTTATTTCGGTCGTCTTTACCAATTTTATGTTCAAAG *** ******* ******** **:** ********:** ***.******* C1 GCTGGCGAAGGTAAAGGAGCGCGATTTACCAGAACAGCGGGCATACATCT C2 GCTGGCGAAGGTAAAGGACTTCGATTTACCAGAAGGACGGGCGTTCGTCT C3 GCTGGCGAAGGTAAAGGACTTCGATTTACCAGAAGGGCGGGCGTTCGTCT C4 GCTGGCGAAGGCAAAGGAGCGCGATATTCCAGAACATCGGGCTTACATCT C5 GCTGGCCAAGGCAAAGGAGCGCGATATCCCAGAACATCGGGCTTACATCT ****** **** ****** ****:* ****** . ***** *:*.*** C1 ATGGCGCACTTGCTGACTGCTGCAAGGCGTTAAAAGGTTGCTGTGCTACT C2 ATGGCGCACTGGCTGACTGCTGCAGGGCGCTAAAAGGATGCTGTGCTACT C3 ATGGCGCACTGGCTGACTGCTGCAGGGCGCTAAAGGGATGCTGTGCTACT C4 ATGGCGCATTGGCTGACTCCTTCAAGGCGCTGAAGGGATGCTCTGCTACT C5 ATGGCGCTTTGGCTGACTCCTTCAAGGCGCTGAAGGGATGCTCTGCAACA *******: * ******* ** **.**** *.**.**:**** ***:**: C1 TATTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAGGGATTCTGA C2 TACTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAAGGATTCTGA C3 TACTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAAGGATTCTGA C4 TACTTTGACGGCCTGTGCCCCCTTTTTATCACCGGAACCAAGGATTCTGA C5 TACTTCGACGCCCTGTGCCCCATTTTTATCACTGGCTCCAAGGATTCTGA ** ** ** * ***. * ***.********.* ** :***.********* C1 TGCCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC C2 TGGCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC C3 TGGCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC C4 TGCCAAATCGCGACAGAACTCCTATTATGCACTAGGCGAACTGGTCATCC C5 TGCCAAATCGCGACAGAACTCCTATTATGCACTAGGCGAACTGGTCATCC ** **** ******************:*************.* ***:*** C1 ATTCCGAGGAAAAATCATTCGAGTCTTATCCGACAATTTTGCAAGCCCTT C2 ATTCCGAGGAAAAATCATTAGAGTCTTATCCGACAATTTTGCAAGCCCTT C3 ATTCCGAGGAAAAATCATTACAGTCTTATCCGACAATTTTGCAAGCCCTT C4 ATTCCGAGGAAAAATCATTCGAGTCGTATCCGGCAATTCTGCAAGCCCTT C5 ATTCCGAGGAGAAATCATTCGAGTCTTATCCGGTAATTTTGCAAGCTCTT **********.********. **** ******. **** ******* *** C1 TCCGAAGCAATTGTCAGGGAATCCGTTCCTGCCGCCATGGACAACATTTG C2 TCCGAAGCAATTGTCAGGGAATCCGTTCCCGCCGCCATGGACAACATTTG C3 TCCGAAGCAATTGTCAGGGAATCCGTTCCCGCCGCCATGGACAACATTTG C4 TCCGAAGCAATTGTCAGGGAGTCCCATCCCGCCGCCCTGGACAACATTTG C5 TCCGAAGCAATTGTCAGGGAGTCCAATCCCCCCGCCTTGGACAACATTTG ********************.*** :*** ***** ************* C1 CGGAGCAGTTGCTCGTCTCATAGTTACCAACCCAGATTCAGTGCCGCTTG C2 CGGAGCAGTTGCTCGGCTCATAGTTACCGACCTAGATTCAGTGCCGCTTG C3 CGGAGCAGTTGCTCGGCTCATAGTTACCGACCTAGATTCAGTGCCGCTTG C4 CGGAGCAGTTGCTCGCCTTATAGTTACCAACCCGGATTCAGTGCCGCTTG C5 CGGAGCAGTTGCTCGCCTCATAGTTACCAACCCTGATTCAGTGCCGCTTG *************** ** *********.*** **************** C1 GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGATGACACC C2 GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGAGGACACC C3 GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGAGGACACC C4 CCCAGGTGCTGCCCGTGCTGCTCAACCATTTGCCCCTTAAGGAGGACGTA C5 CCCAGGTGTTGCCCGTGTTGCTCAATCATTTGCCACTGAAGGAGGACGTC ******* ******** ****** ********.** ***** ***. . C1 GTGGAGAACGATGTGATTCAGAAGGCGTTCCGTGTGCTATACTTGAAGGC C2 GTGGAGAACGATGTGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC C3 GTGGAGAACGATGTGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC C4 GTGGAGAACGATATGATTCAGAAGGCGTTCCGCGTTCTATACGTAAAGGC C5 ATTGAAAACGATATGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC .* **.******.******************* ** ****** *.***** C1 CCGCCCCAGCATTGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG C2 CCGCCCCAGCATAGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG C3 CCGCCCCAGCATAGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG C4 TCGCCCCAGCATTGTTGCACATCTCGAGCAAATCCTGGTCATTACCATAG C5 TCGCCCCAGCATTGTTGCACATCTCGAGCAAATCCTGGTCATCACCATAG ***********:*: ******** ************* *** ******* C1 AGGCGAGTTACAAGAGACAGATGCCTGACGTCGAGACAACCGAGAGCGCG C2 AGTCGAGTTACAAGAAACAGATGCCTGACGTCGAGACAACCCAGAGCGCG C3 AGTCGAGTTACAAGAAACAGATGCCTGACGTCGAGACAACACAGAGCGCT C4 AGGCGATTTACAAGAAACAGATGCCAGACGACGAGACAACCGAGAGCGCA C5 AGGCGATTTACAAGAAACAGATGCCAGACGACGAGACAACCGAGAGCGCG ** *** ********.*********:****:*********. ******* C1 GTGGCCCTCATCAAAGAGATTCGCGCCAACTACCCGGAACTGTTCAGCAA C2 GTGGCCCTCATCAAAGAGATTAGCGCCAAATACCCGGAACTGTTTAACAA C3 GTGGCCCTCATCAAGGAGATTAGCGCCAACTACCCGGAACTGTTTAACAA C4 GTGGCCCTCATCAAAGAGATTCGCGCCAATTACCCGGAACAGTTTAACCA C5 GTGGCCCTCATCAAAGAGATTCGCGCCAATTACCCGGAACAGTTTAACCA **************.******.******* **********:*** *.*.* C1 AGTATCGAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG--- C2 AGTATCAAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG--- C3 AGTATCGAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG--- C4 AGTATCAAACGCGAATCCGGAAGTGTTTAATTATGTGCAAACTCTG--- C5 AGTATCAAACGCGAATCCGGAAGTTTTCAATTATGTGCAAACTCTG--- ******.***. ******.***** ** ************.* *** >C1 ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGACCATAGACAC GGAACGAATCCGTGAGTCCACAGCCAAGATGCTAAAGGCCTACGAGAATC CCGATTCTCTGCTGGTTCTCACCCAGATCGTGATGTCGGACAGGCCGGTC CAAGAGCGGCAGGTCGCCGCCGTGCTCCTCAAGAGGCGGGTCAAAAAGTT ACGCCACTGGCAGTTGGTTCCCGCCGAGCACCAGGCAGCAATCAAATCGA ACATGCTACAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG GTGGCCTTTATAATTGGATCGCTGGTGCGCCACGAGGAGGGCGAGCAAAA CTCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGCC CCGATCCAATAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCTCGCTCATG GACGCTGCTCCCGATCAGTTTTCGGACCACACGGATACTATGTTCCCATT GCTTGCCGGCATTCTAGTTACCGCCGAGGCGAATGGGAACATGGCCACAC CCACCGTGCATAACATGCTGACCGGTTCATGCTTCTTGTTGCCTTTCGTA AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT ACTCAAGGCCCTGGCCGCCTTTGTCGAAAAGGGGTACAGTATTGAGTTCA TGGGTGCCTTTGATATCATCGACAGCATGGCCGAGCATGTGCCCCACTTG CTGACCGGTAATGTGAAGCTGCTTCTGGAGTTTTGTCTGATGATTGCGAG AAACAAGCAGTTCGACGCTTCGATTCGGGTTCAGGTGCTTACCTTTGTAG GCAGCCTAGTTCGCCTCAAGAAGAAAATTATTATGAAGCAGAAACTACTA CAGCCCACACTATCTGTTCTTTTCGAAGTGATTTGCCAGGACGACCTCGA GGAAGGTGACGATGATTACTTTTCCTCGGAGAGCCTGAGTAGTCCATCCA ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC AAGTTTATTCCGCCACTACTGGATTTGCTGGAGCCTGCGTTGCAGAGCCC GGAACCTGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTTATTGCCG AGGGCTGTTCCGAGGCCATTGGGAAAAAGTATCTCGAGGTCATGCTAAAT ATCATCAAAGCTGGAGTGTTGGACTCTGTTATGTTCGTGCGGACCGCCGC ATTCTTCGCCCTCGGTCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA AGTTTGCTCCCCAAATTCTACCCGTGTTGTTCGACTATCTAAACCAGCTG GTACTGGAACTCAAGGTTGGTGAGCCGGATTCGAAACATATGGATCGTAT GTTTTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGATATTGTTC CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG AACTCAAATCAAATGCGTGAAATGGCTTTGTCGGCCATAGCAGCGGTGTC AGCAGCAGCTAAGGAAAACCTGATGCCATATTTCCCCAGGATCATGACCG TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCAG CGCATCCAAGCTATCGACACTCTGGCCGCGCTGTGTCGCGAATTGGGCAA GGATAATATTATTCCTCTTGCCGACGATACAATGAACTTCTGCCTGATGA TGCTGGAAGACGGTCCGGATGATCCCGAGTACCGCAGGAGTATATACAAC CTGATGTCCTCCCTGTCATCAGTTGTCAACGAGAGCATGGCCAGTGTGTT CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTTTTCGGAGGACA TGGTGCCAAATGTGTCGGACAATGCGGACGATGATTTGGCCCTAGTAGAT GCCCCCGACATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA AGACGCTTACCCGGTGGAGAATGATTATATCGTCGAAAAGGAGGAGGCCA TTCTGTCACTCAAGGAGTTTGCTACCCATACCGGCGCCGCCTTCGCGCCC TATTTGCAATCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA AGGCGACGTTCGTATGGCATGTATTGACTCCATTTGCTCGTTCATTACGG CTCTCCACAAGTTGGATGATGCCGCCGGCCTGAAGCGCGCCTGCGAGATT GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGCGGT CGTACTCCGCATGCTTGACGTCCTCTACGATGTCTTCAAGTACGTGCCG- -----GCGATAAACAGCCAGGAGCACGCCGAACTTATATTCGGTTGCATC AGGGACATCTTCACAAATAAAATGGCCTGTCAGTTTAACGAGGAGAGCGG CGGCGGAGATGATGAGTGTTCGGAGGAAAGCGAGAACGACGAGATGCTGT TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCCTTCAGCCG GAGCTGTTCTCGCTTTATTTTGGACGCCTTTACCATTTCTATATTCAAAG GCTGGCGAAGGTAAAGGAGCGCGATTTACCAGAACAGCGGGCATACATCT ATGGCGCACTTGCTGACTGCTGCAAGGCGTTAAAAGGTTGCTGTGCTACT TATTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAGGGATTCTGA TGCCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC ATTCCGAGGAAAAATCATTCGAGTCTTATCCGACAATTTTGCAAGCCCTT TCCGAAGCAATTGTCAGGGAATCCGTTCCTGCCGCCATGGACAACATTTG CGGAGCAGTTGCTCGTCTCATAGTTACCAACCCAGATTCAGTGCCGCTTG GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGATGACACC GTGGAGAACGATGTGATTCAGAAGGCGTTCCGTGTGCTATACTTGAAGGC CCGCCCCAGCATTGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG AGGCGAGTTACAAGAGACAGATGCCTGACGTCGAGACAACCGAGAGCGCG GTGGCCCTCATCAAAGAGATTCGCGCCAACTACCCGGAACTGTTCAGCAA AGTATCGAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG--- >C2 ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGGCCATGGACAC GGACCGAATCCGTGAGTCCACAGACAAGATGTTAAAGGCCTATGAGAATC CAGATTCTCTGCTGGTTCTCACCCAGATCATAATGTCGGACAGGCCGGTC CAGGAGCGGCAGGTCGCCGCCGTGCTCCTCAAAAGGCGGGTCAAAAAGTT GCGCCACTGGCAGTTGGTTCCCGCCGAGCACCAAGCAGCAATTAAATCGA ACATGCTGCAGGTCCTTATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG GTGGCCTTTATAATTGGATCGCTGGTTCGCCACGAGGAGGAAAAGCAAAA CTCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCACGCTCATG GACGCTGCTCCCGATCAGTTTTCGAACCACACGGATACTATCTTCCCGTT GCTTGCCGGCACTCTAGTAACCGCCGAGGCGAATGGGAACATGGCCACAC CCACCGTGCATAACATGCTGGCGGGTATATGCTTCCTGTTGCCTTTCGTC AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT TCTCAAGGCCCTGGGCGCCTTCGCCGAAAAGGGGGACAGTAATGAGTTTA TGGGTGCCTTTGATATCATGGACAGCATGGCCGAGTATGTGCCGCACTTG CTGACCGGCAATGTGAAGCTAATTCTGGAGTTTTGTCTGACGATTTCGAG AAACAAGCAGGTCGACGCTGCGATTCGGGTTCAGGTGATTACCTTTGTGG GCAGCCTAATTCGCCTCAAGAAGAAGATTATTATGAAGCAGAAACTACTC CAGCCCACTCTATCGGTTATTTTCGAAGTGATTTGCCAGGACGTCCTTGA CGATGGTTACGATGATTACTTTTCCTCGGAGAGCCTGAATAGCCCATCCA ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC AAGTTTATTCCGCCACTACTGGAATTGCTGGAGCCTGCGTTGCAGAGCCC GGAACCTGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTCATTGCTG AGGGCTGCTCCGAGGCCATTGGGAAAAAGTATCTGCAGGTCATGCTAAAT ATCATCAAAGCTGGAGTTTTGGACTCTGTTATGTTGGTGCGGACCGCTGC ATTCTTCGCCCTTGGCCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA AGTTTGCTCCTCAAATTCTTCCCGTGCTGTTTGACTATCTAAGCCAGCTG GTAATGGAACTCAAGATTGGTACGCCTAATCCGAAACATATGGATCGTAT GTTCTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGAAATTGTTC CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG AACACGAATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTGTC AACAGCAGCTAAGGAACACCTGATGCCATATTTCCCCAGGATCATGACCG TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCTC CGCATCCAAGCTATCGACACTCTGGCCGAGCTCTGTCGCGAAGTGGGCAA AGATAATATTATTCCGCTTGCCGACGATACAATGAATTTCTGTCTGATGA TGCTAGAAGATGGTCCGGATGATCCCGAGTTCCGCAGGAGTATATACAAC CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCAGTGTGTT CCCCAAGTTCATTGATCGCATAATGGAATCTGTGATTTCATCGGAGGACA TGGTGCCAAATGTGTCGGACAATGCGGAGGATGATTTGGCCCTAGAAGAT GCCGCCAATATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA AGACGCTTACCTGGTGGAGAATGATTATATCATTGAAAAGGAGGAGGCCA TTATGTCACTCAAGGAGTTTGCTACCCATACGGGCGCCGCCTTTGCGCCC TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA GAGCGACGTTCGTATGGCGTGCATTGACTCCATCTGCGCGTTCATTACGG CTCTCCACAAGTTGGATGATGCCGTCGGCCTGAAACGCGCCTGCGAGATT GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGGGGT CGTAAACCACTTGCTTGACGCCCTCTACGATGTCTTCAAGAACGTGCCG- -----GCGATAAACAGCCAAGAGCACGCCGAACTAATTTTCGCTTGCATC AGGGACATTTTCACAAATGAAATGGCCTGCCAGTTTAACGAGGAGAGCGG CGGCGGAGATGATGAGTATCCGGAGGAAAGCGAGAACGAAGAGATGCTGT TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCATTCAGCCG GAGCTGTTCTCGCTTTATTTCGGACGCCTTTACCATTTCTATATTCAAAG GCTGGCGAAGGTAAAGGACTTCGATTTACCAGAAGGACGGGCGTTCGTCT ATGGCGCACTGGCTGACTGCTGCAGGGCGCTAAAAGGATGCTGTGCTACT TACTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAAGGATTCTGA TGGCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC ATTCCGAGGAAAAATCATTAGAGTCTTATCCGACAATTTTGCAAGCCCTT TCCGAAGCAATTGTCAGGGAATCCGTTCCCGCCGCCATGGACAACATTTG CGGAGCAGTTGCTCGGCTCATAGTTACCGACCTAGATTCAGTGCCGCTTG GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGAGGACACC GTGGAGAACGATGTGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC CCGCCCCAGCATAGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG AGTCGAGTTACAAGAAACAGATGCCTGACGTCGAGACAACCCAGAGCGCG GTGGCCCTCATCAAAGAGATTAGCGCCAAATACCCGGAACTGTTTAACAA AGTATCAAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG--- >C3 ATGGAGGCAGCTATTCTGGATATAATCAACGGGATCCTGGCCATGGACAC GGAACGAATCCGTGAGTCCACAGACAAGATGTTAAAGGCCTATGAGAATC CAGATTCTCTGCTGGTTCTCACCCAGATCATAATGTCGGACAGGCCGGTC CAGGAGCGGCAGGTCGCCGCCGTGCTCCTCAAAAGGCGGGTCAAAAAGTT GCGCCACTGGCAGTTGGTTCCCGCCGAGCACCAAGCAGTAATTAAATCGA ACATGCTGCAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG GTGGCCTTTATAATTGGATCGCTGGTGCGCCACGAGGAGGAAAAGCAAAA CCCCTGGAGGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTTCCACGCTCATG GACGCTGCTCCCGATCAGTTTTCGAACCACACGGATACTATCTTCCCGTT GCTTGCCGGCACTCTAGTAACCGCCGAGGCGAATGGGAACATGGCCACAC CCACCGTGCATAACATGCTGGCGGGTATATGCTTCCTGTTGCCTTTCGTC AGTGGACATAGTAATGCTGAGCAGATTGTGGTTAAGGCTGTGCCGCTCAT TCTCAAGGCCCTGGGCGCCTTCGCCGAAAAGGGGGACAGTAATGAGTTCA TGGGTGCCTTTGATATCATGGACAGCATGGCCGAGTATGTGCCGCACTTG CTGACCGGCAATGTGAAGCTAATTCTAGAGTTTTGTCTGACGATTGCGAG AAACAAGCAGGTCGACGCTGCGATTCGGGTTCAGGTGATTACCTTTGTGG GCAGCCTAATTCGCCTCAAGAAGAAGATTATTATGAAGCAGAAACTACTC CAGCCCACTCTATCGGTTATCTTCGAAGTGATTTGCCAGGACGTCCTTGA CGATGGTTACGATGATTACTTTTCCTCGGAGAGCCTGAATAGCCCATCCA ATGCAGCTGCGCAGACACTGGACCTGATGGCCCTTCACATGGTGCCGGAC AAGTTTATTCCGCCACTACTGGAATTGCTGGAGCCTGCGTTGCAGAGCCC GGAACCCGTGCTTCGCCGTTCCTCTTTTATTTGCATGGGCGTCATTGCCG AGGGCTGCTCCGAGGCCATTGGGAAAAAGTATCTGCAGGTCATGCTAAAT ATCATCAAAGCTGGAGTTTTGGATTCTGTTATGTTGGTGCGGACCGCCGC ATTCTTCGCCCTCGGCCAGTTTTCCGAGTTTCTTCAGCCGACGATCTGCA AGTTTGCTCCTCAAATTCTTCCCGTGCTGTTTGACTATCTAAGCCAGCTG GTAATGGAACTCAAGATTGGTACGCCTAATCCGAAACATATGGATCGTAT GTTCTATGCCCTGGAGACCTTTTGCGAGAATCTGGATGAGGAAATTGTTC CTTATTTACCCACACTTATGGATCGTCTGTTTGGGGTTATGGAACCGCAG AACACGAATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTGTC AACAGCAGCTAAGGAACACCTGATGCCATATTTCCCCAGGATCATGACCG TACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGAAATGTACAGTCTC CGCATCCAAGCTATCGACACTCTGGCCGAGCTCTGTCGCGAAGTGGGCAA AGATAATATTATTCCGCTTGCCGACGATACAATGAATTTCTGTCTGATGA TGCTAGAAGATGGTCCGGATGATCCCGAGTTCCGCAGGAGTATATACAAC CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCAGTGTGTT CCCCAAGTTCATTGATCGCATAATGGAATCTGTGATTTCTTCGGAGGACA TGGTGCCAAATGTGTCGGACAATGCGGAGGATGATTTGGCTTTAGAAGAT GCCGCCAATATAGAGATTGATTTAGAGCACACAGACGACGAAGATGACCA AGACGCTTACCTGGTGGAGAATGATTATATCATTGAAAAGGAGGAGGCCA TTATGTCACTCAAGGAGTTTGCTACCCATACGGGCGCCGCCTTTGCGCCC TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA GAGCGACGTTCGTATGGCGTGCATTGACTCCATCTGCGCGTTCATTACGG CTCTCCACAAGTTGAATGATGCCGTCGGCCTGAAGCGCGCCTGCGAGATT GCCATTCCAAAGTTTGCACATATAATGCGCACCGACGACCAGGTTGGGGT CGTAAACCACTTGCTTGACGTCCTCTACGATGTCTTCAAGAACGTGCCG- -----GCGATTAATAGCCAAGAGCACGCCGAACTAATTTTCGCTTGCATC AGGGACATTTTCACAAATGAAATGGCCTGCCAGTTTAACGAGGAGAGCGG CGGCGGAGATGATGAGTATCCGGAGGAAAGCGAGAACGAAGAGATGCTGT TCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCATTCAGCCG GAGCTGTTCTCGCTTTATTTCGGACGCCTTTACCATTTCTATATTCAAAG GCTGGCGAAGGTAAAGGACTTCGATTTACCAGAAGGGCGGGCGTTCGTCT ATGGCGCACTGGCTGACTGCTGCAGGGCGCTAAAGGGATGCTGTGCTACT TACTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAAGGATTCTGA TGGCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATTGTCTTCC ATTCCGAGGAAAAATCATTACAGTCTTATCCGACAATTTTGCAAGCCCTT TCCGAAGCAATTGTCAGGGAATCCGTTCCCGCCGCCATGGACAACATTTG CGGAGCAGTTGCTCGGCTCATAGTTACCGACCTAGATTCAGTGCCGCTTG GCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGAGGACACC GTGGAGAACGATGTGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC CCGCCCCAGCATAGAGGCACATCTTGAGCAAATCCTGGCCATCACCATAG AGTCGAGTTACAAGAAACAGATGCCTGACGTCGAGACAACACAGAGCGCT GTGGCCCTCATCAAGGAGATTAGCGCCAACTACCCGGAACTGTTTAACAA AGTATCGAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCCCTG--- >C4 ATGGAGGCAGCTATTCTGGACATAATCAGCGGGATCCTGGGCACGGACAC GGAGCGGATTCGTCAGTCAACAGCCAAGATGATGAAGGCCTACGAGAATC CCGATTCTCTGCTGGTTCTCACCCAGATTGTGATGTCGGACAGGGCGGTC CAGGAACGGCATATCGCCGCTATGCTTCTCAAGAAGCGGATCAGCAAGTT GCGCCACTGGCAGTTGGTTCCCGCCGAGCATCAGGCCGCAATTAAAACGA ACATGCTTCAGGTCCTTATTGCGGTGAAGGAAAAGACGGTGAAGGGCACG GTGGCCCAGATAATTGGATCGCTGGTGCGCCACGAGGCGGAAAAGGAACA TTCCTGGATGGAGGAAATACTGAAGTTTATTTACGAACGTTGCAGCAGTC CCGATCCAACAGAAAGCGAGCGCGGCAGCTCAATCTTTACCACGCTCATG GACGCTGCTCCCGATCAGTTTTCGAACCACATGGATACTATCTTCCCGCT GTTCGCCGGCGTTCTAGTAACCGCAGAGGCGAACGGTAACATGGCCACAC CCACCGTGTTTAACATGCTGGCGGGTACGTGCTACCTCCTGCCCTTCGTT AGCGGTCATAGTGGTGCTGAGCAGATTGTGGTTAAGGCTATACCGCTAAT TCTCAAGGCCCTAGGCGCCTTCGCCGAAAAGGGGGATAGTCAGGAGTTCA TGGGTGCTTTTGATATCATAGACGCCATGGGCGAGTATGTGCCACACTTA CTGACTGGTAATGTGAAGCTGATTTTGGAGTTTTGTCTGGTGATTGCGAG CAATCAGCAGCTCGAGGATTCGATTCGAGTTCAGGTGATTACCTTTGTGG GCAGCCTAATGCGCCTGAAAAAGAAGGTTATTATGAAGCAGAAGCTGCTG GAGCCCACACTAGCGGTTATGTTCGAAGTGATGTGCCAGGACCCACTTGA TGACGGTTACGATGATTACTTTTCGTCAGAGAGCTCGAATAGCCCGTCCA ATGCAGCTACGCAGACTCTGGACTTGATGGCCCTCCACATGGCGCCGGAG AAGTTTATTCCGCCACTACTGCAGCTGCTGGAGCCTGCGTTGCAGAGCCC GCAGCCCGTGCTTCGTCGTTCCTCTTTTATTTGCATGGGAGTCATTGCCG AGGGCTGCTCCGAGGCCATTGGGAACAAGTATCTGGAGGTCATGCTAAAT ATTGTCAAAGCTGGAATTTTTGACTCTGTTATGTTGGTGCGGGTCGCCGC ATTCTTCGCTCTTGGACAGTTTTCCGAGTATCTTCAGCCCACAATCTGCA AGTTTGCTCCCCAGATTCTTCCCGTGTTGTTCGATTATCTGAGCCAGCTG GTAATGGAACTCAAGATTGGTACGCCGGAACCGAAACACATGGATCGTAT GTTCTATGCCTTGGAGACCTTTTGCGAGAACCTGGAGGACGACATCGTTC CCCATTTACCCACGCTGATGGATCGCCTGTTTGGGGTTCTGGAACCCCAG AACTCGTATCGAATGCGTGAAATGGGTTTGTCGGCCATAGCAGCGGTCTC AACCGCAGCTAAGGTACACTTGATGCCCTATTTCCCCAGGATCATGAGCA TACTACAGGGCTGTCTGGTGAAGGAGTGCCCAAAGGAAATGCAAAGTCTG CGCATCCAAGCTATCGACACTCTGGCCGCGCTCTGTCGCGAAGTGGGCAA GGATAATATTATTCCGCTTGCCGACGATACAATGAACTTCTGTCTGATGA TGCTGGAAGATGGTCCGGACGATCCTGAGTTCCGCAGGAGCATCTACAAC CTGATGTCCTCCCTGTCATCGGTTGTCAACGAGAGCATGGCCTCTGTGTT CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTCTTCGGAGGACG TGTTGCCACATGTTTCGGACAATGCGGAGGAAGATTTGATCCTG---GAT ACGACCGATGTAGAGATTGATTTAGATCAAACAGACGACGAAGACGACCA AGACGGCTACCAGGTGGAGAATGATTACGTTATTGAGAAGGAGGAGGCTA TTATGGCACTTAAGGAGTTTGCTGCACACACGGGCGCCGCCTTTGCACCC TATTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA GGACGACGTCCGTAAGGCGTGCATTGACGCCATTTGCGGATTCATTGTGG CTCTCTACAAGTTGGGAGATGCCGCCGGCTTGAAGCGCGCCTGCGAGATT GCCATTCCAAAGTTTGCACATATGATGCGCACTGACGACGAGGTTGGGGT CGTACTCCATCTGCTTGACGTACTCGGCGATGTCTTCAAGGATGTCCAGT TGCAGGCAATAAACAACCAGGAGCACGCCGAACTAATTTTCGGATGCATT CGGGACGTCTTCACAAATAAGATGGCCTGTCAGTTTAACGAAGAGAGCGG CGGTGGAGATGAGGAGGACTCGGAGGAAAGCGAGAACGACGAGATGCTGT TCGAGAACGCTGCCAATCTGTTCCCCTTGTTTGGCTTGGCCCTTCAGCCG GAGTTGTTCTCTCTTTATTTCGGACGCCTTTACCAATTTTATGTTCAAAG GCTGGCGAAGGCAAAGGAGCGCGATATTCCAGAACATCGGGCTTACATCT ATGGCGCATTGGCTGACTCCTTCAAGGCGCTGAAGGGATGCTCTGCTACT TACTTTGACGGCCTGTGCCCCCTTTTTATCACCGGAACCAAGGATTCTGA TGCCAAATCGCGACAGAACTCCTATTATGCACTAGGCGAACTGGTCATCC ATTCCGAGGAAAAATCATTCGAGTCGTATCCGGCAATTCTGCAAGCCCTT TCCGAAGCAATTGTCAGGGAGTCCCATCCCGCCGCCCTGGACAACATTTG CGGAGCAGTTGCTCGCCTTATAGTTACCAACCCGGATTCAGTGCCGCTTG CCCAGGTGCTGCCCGTGCTGCTCAACCATTTGCCCCTTAAGGAGGACGTA GTGGAGAACGATATGATTCAGAAGGCGTTCCGCGTTCTATACGTAAAGGC TCGCCCCAGCATTGTTGCACATCTCGAGCAAATCCTGGTCATTACCATAG AGGCGATTTACAAGAAACAGATGCCAGACGACGAGACAACCGAGAGCGCA GTGGCCCTCATCAAAGAGATTCGCGCCAATTACCCGGAACAGTTTAACCA AGTATCAAACGCGAATCCGGAAGTGTTTAATTATGTGCAAACTCTG--- >C5 ATGGAGGCAGCTATTTTGGACATAATCAGCGGGATCCTGGGCATGGACAC GGAACGGATTCGTCAGTCAACAGCCAAGATGATGAAGGCCTACGAGAATC CCGATTCACTGCTGGTTCTCACCCAGATCGTGATGTCGGACCGGGCGGTC CAGGAGCGGCATGTCGCCGCCGTGCTCCTCAAGAGGCGGATCAGCAAGTT GCGCCACTGGCAGTTGGTTCCCGCCGAGCATCAGTCAGCAATTAAAACGA ACATGCTTCAGGTCCTCATCGCGGTGAAGGAAAAGACCGTGAAGGGCACG GTAGCCCAGATAATTGGATCGCTGGTGCGACACGAGGCGGAGAAGGAACA CTCCTGGTTGGAGGAAATACTGAAGTTCATTTACGAACGTTGCAGCAGTC CCGATCCAACAGAAAGCGAGCGGGGCAGCTCAATCTTTACCACACTCATG GACGCTGCTCCCGATCAGTTTTCGAACCACATGGATACTATCTTCCCGTT GTTCGCCGGCGTTCTGGTAACCGCCGAGGCGAACGGTAACATGGCCACAC CCACCGTGTTTAACGTGCTGACGGGTACGTGCTACCTCCTGCCCTTCGTC AGTGGACATAGTGGTGCTGAGCAGATTGTTGTTAAGGCTGTGCCGCTAAT TCTCAAGGCCCTAGGCGCCTTCGCCGAAAAGGGGGACAGTCAGGAGTTCA TGGGAGCTTTTAATATCATAGACGCCATGGGCGAGTATGTGCCCCATTTG CTGACCGGTAATGTGAAGCTGATTCTGGAGTTCTGTCTGATAATTGCGAG CAACCAGCAGCTCGAGGATTCGATTCGAGTTCAGGTGATTACCTTTGTTG GCAGCCTAATGCGCCTTAAGAAGAAGGTTATTATGAAGCAGAAACTGCTG GAACCCACTCTTGCGGTTATGTTCGAAGTGATGTGCCAGGACTCCCTTGA TGATGGTTACGATGATTACTTTTCGTCTGAGAGCTCGAATAGCCCGTCCA CTGCAGCTACGCAGACTCTGGACTTGATGGCCCTCCACATGTCGCCGGAG AAGTTTATTCCGCCACTACTGCAGCTGTTGGAGCCAGCGTTGCAGAGCCC ACAACCTGTGCTTCGCCGCTCCTCTTTTATTTGTATGGGCGTCATTGCCG AGGGCTGCTCCGAGGCCATTGGGAACAAGTATCTGGAGGTCATGCTGAAT ATCGTCAAAGCTGGAATTTTCGACTCTGTTATGTTGGTGCGGGTCGCCGC ATTCTTCGCCCTTGGACAGTTTTCCGAGTATCTTCAGCCGACAATCTGCA AGTATGCTCCCCAGATTCTTCCCGTGCTGTTCGACTATCTGAGCCAGCTG GTAATGGAACTCAAGATTGGTACGCCGGAACCGAAACACATGGATCGTAT GTTCTATGCCTTGGAGACCTTTTGCGAGAATCTGGGGGATGACATTATTC CCCATTTACCTACGCTGATGGAGCGTCTGTTTGGGGTTCTGGAACCCCAG AACTCGCATCGAATGCGTGAAATGGGTTTGACGGCCATAGCAGCGGTCTC AACCGCAGCTAAAGAACACCTGGTGCCCTATTTCCCTAGGATCATGAGTG TACTACAGGGCTGTCTGGTGAAGGAGTGCCCAAAAGAAATGCAAAGTCTG CGCATCCAAGCTATCGACACTCTGGCCGCGCTCTGTCGCGAAGTGGGCAG GGATAATATTATTCCGCTTGCCGACGATACAATGAACTTCTGTCTGATGA TGTTGGAAGATGGTCCGGACGATCCCGAAGTCCGCAGGAGCATATACAAC CTGATGTCCTCCCTGTCATCAGTTGTCAAAGAGAGCATGGCCACTGTGTT CCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATTTCTTCGGAGGACG TGTTGCCAAATGTGTCAGAGAATCCAGAGGATGATTTGATCCTG---GAT ACAACCGATGTAGAGATTGATTTAGATCAAACAGATGACGAAGATGACCA AGACTGCTACCAGGTGGAGAACGATTACGTTTTTGAGAAGGAGGAGGCTA TTCTGGCACTTAGGGAGTTCGCTGCACATACGGGCGCCGCCTTCGCGCCC TACTTGCAGTCTGCATTCGAGAACGTCTACAAGATGATTGATCATCCGCA GGGCGACGTCCGTAAGGCGTGCATTGACGCCATTTGCGGGTTCATTACGG CTCTCCATAAGTTGGAAGATGCCGCCGGCTTGAAGCGCGCCTGCGAGATT GCCATTCCAAAGTTTGCACATATGTTGCGCACTGACGACGAGGTTGGGGT CGTACTCCATCTGCTTGACGAACTCGGCGATGTCTTCAAGGATGTCCAGT TGCAGGCAATAAACAACCAGGAGCATGCCGAACTAATTTTCGGGTGCATC CGCGACGTCTTCACAAATAAAATGGCCTGTCAGTTTAACGAGGAGAGCGG TGGTGGAGATGAGGAGGATTCGGAGGAAAGCGAGAACGACGAAATGCTGT TCGAGAACGCTGCCAATCTGTTCCCTTTGTTTGGCTTAGCCCTTCAGCCG GAGTTGTTCTCGCTTTATTTCGGTCGTCTTTACCAATTTTATGTTCAAAG GCTGGCCAAGGCAAAGGAGCGCGATATCCCAGAACATCGGGCTTACATCT ATGGCGCTTTGGCTGACTCCTTCAAGGCGCTGAAGGGATGCTCTGCAACA TACTTCGACGCCCTGTGCCCCATTTTTATCACTGGCTCCAAGGATTCTGA TGCCAAATCGCGACAGAACTCCTATTATGCACTAGGCGAACTGGTCATCC ATTCCGAGGAGAAATCATTCGAGTCTTATCCGGTAATTTTGCAAGCTCTT TCCGAAGCAATTGTCAGGGAGTCCAATCCCCCCGCCTTGGACAACATTTG CGGAGCAGTTGCTCGCCTCATAGTTACCAACCCTGATTCAGTGCCGCTTG CCCAGGTGTTGCCCGTGTTGCTCAATCATTTGCCACTGAAGGAGGACGTC ATTGAAAACGATATGATTCAGAAGGCGTTCCGCGTGCTATACTTGAAGGC TCGCCCCAGCATTGTTGCACATCTCGAGCAAATCCTGGTCATCACCATAG AGGCGATTTACAAGAAACAGATGCCAGACGACGAGACAACCGAGAGCGCG GTGGCCCTCATCAAAGAGATTCGCGCCAATTACCCGGAACAGTTTAACCA AGTATCAAACGCGAATCCGGAAGTTTTCAATTATGTGCAAACTCTG--- >C1 MEAAILDIINGILTIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEGEQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM DAAPDQFSDHTDTMFPLLAGILVTAEANGNMATPTVHNMLTGSCFLLPFV SGHSNAEQIVVKAVPLILKALAAFVEKGYSIEFMGAFDIIDSMAEHVPHL LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL QPTLSVLFEVICQDDLEEGDDDYFSSESLSSPSNAAAQTLDLMALHMVPD KFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN IIKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQL VLELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQ NSNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQ RIQAIDTLAALCRELGKDNIIPLADDTMNFCLMMLEDGPDDPEYRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVIFSEDMVPNVSDNADDDLALVD APDIEIDLEHTDDEDDQDAYPVENDYIVEKEEAILSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEI AIPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVPooAINSQEHAELIFGCI RDIFTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQP ELFSLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCAT YFDALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQAL SEAIVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDT VENDVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKRQMPDVETTESA VALIKEIRANYPELFSKVSNMNPEVFNYVQAL >C2 MEAAILDIINGILAMDTDRIRESTDKMLKAYENPDSLLVLTQIIMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEEKQNSWREEILKFIYERCSSPDPTESERGSSIFSTLM DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL LTGNVKLILEFCLTISRNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLDDAVGLKRACEI AIPKFAHIMRTDDQVGVVNHLLDALYDVFKNVPooAINSQEHAELIFACI RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLESYPTILQAL SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA VALIKEISAKYPELFNKVSNMNPEVFNYVQAL >C3 MEAAILDIINGILAMDTERIRESTDKMLKAYENPDSLLVLTQIIMSDRPV QERQVAAVLLKRRVKKLRHWQLVPAEHQAVIKSNMLQVLIAVKEKTVKGT VAFIIGSLVRHEEEKQNPWREEILKFIYERCSSPDPTESERGSSIFSTLM DAAPDQFSNHTDTIFPLLAGTLVTAEANGNMATPTVHNMLAGICFLLPFV SGHSNAEQIVVKAVPLILKALGAFAEKGDSNEFMGAFDIMDSMAEYVPHL LTGNVKLILEFCLTIARNKQVDAAIRVQVITFVGSLIRLKKKIIMKQKLL QPTLSVIFEVICQDVLDDGYDDYFSSESLNSPSNAAAQTLDLMALHMVPD KFIPPLLELLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLQVMLN IIKAGVLDSVMLVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLSQL VMELKIGTPNPKHMDRMFYALETFCENLDEEIVPYLPTLMDRLFGVMEPQ NTNRMREMGLSAIAAVSTAAKEHLMPYFPRIMTVLQGCLVKDCPKEMYSL RIQAIDTLAELCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALED AANIEIDLEHTDDEDDQDAYLVENDYIIEKEEAIMSLKEFATHTGAAFAP YLQSAFENVYKMIDHPQSDVRMACIDSICAFITALHKLNDAVGLKRACEI AIPKFAHIMRTDDQVGVVNHLLDVLYDVFKNVPooAINSQEHAELIFACI RDIFTNEMACQFNEESGGGDDEYPEESENEEMLFENAANLFPMFGLTIQP ELFSLYFGRLYHFYIQRLAKVKDFDLPEGRAFVYGALADCCRALKGCCAT YFDALRPIFIAGSKDSDGKARQNSYFALGEIVFHSEEKSLQSYPTILQAL SEAIVRESVPAAMDNICGAVARLIVTDLDSVPLGQVLPVWLNHLPLKEDT VENDVIQKAFRVLYLKARPSIEAHLEQILAITIESSYKKQMPDVETTQSA VALIKEISANYPELFNKVSNMNPEVFNYVQAL >C4 MEAAILDIISGILGTDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV QERHIAAMLLKKRISKLRHWQLVPAEHQAAIKTNMLQVLIAVKEKTVKGT VAQIIGSLVRHEAEKEHSWMEEILKFIYERCSSPDPTESERGSSIFTTLM DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNMLAGTCYLLPFV SGHSGAEQIVVKAIPLILKALGAFAEKGDSQEFMGAFDIIDAMGEYVPHL LTGNVKLILEFCLVIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL EPTLAVMFEVMCQDPLDDGYDDYFSSESSNSPSNAATQTLDLMALHMAPE KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKFAPQILPVLFDYLSQL VMELKIGTPEPKHMDRMFYALETFCENLEDDIVPHLPTLMDRLFGVLEPQ NSYRMREMGLSAIAAVSTAAKVHLMPYFPRIMSILQGCLVKECPKEMQSL RIQAIDTLAALCREVGKDNIIPLADDTMNFCLMMLEDGPDDPEFRRSIYN LMSSLSSVVNESMASVFPKFIDRIMESVISSEDVLPHVSDNAEEDLILoD TTDVEIDLDQTDDEDDQDGYQVENDYVIEKEEAIMALKEFAAHTGAAFAP YLQSAFENVYKMIDHPQDDVRKACIDAICGFIVALYKLGDAAGLKRACEI AIPKFAHMMRTDDEVGVVLHLLDVLGDVFKDVQLQAINNQEHAELIFGCI RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT YFDGLCPLFITGTKDSDAKSRQNSYYALGELVIHSEEKSFESYPAILQAL SEAIVRESHPAALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV VENDMIQKAFRVLYVKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA VALIKEIRANYPEQFNQVSNANPEVFNYVQTL >C5 MEAAILDIISGILGMDTERIRQSTAKMMKAYENPDSLLVLTQIVMSDRAV QERHVAAVLLKRRISKLRHWQLVPAEHQSAIKTNMLQVLIAVKEKTVKGT VAQIIGSLVRHEAEKEHSWLEEILKFIYERCSSPDPTESERGSSIFTTLM DAAPDQFSNHMDTIFPLFAGVLVTAEANGNMATPTVFNVLTGTCYLLPFV SGHSGAEQIVVKAVPLILKALGAFAEKGDSQEFMGAFNIIDAMGEYVPHL LTGNVKLILEFCLIIASNQQLEDSIRVQVITFVGSLMRLKKKVIMKQKLL EPTLAVMFEVMCQDSLDDGYDDYFSSESSNSPSTAATQTLDLMALHMSPE KFIPPLLQLLEPALQSPQPVLRRSSFICMGVIAEGCSEAIGNKYLEVMLN IVKAGIFDSVMLVRVAAFFALGQFSEYLQPTICKYAPQILPVLFDYLSQL VMELKIGTPEPKHMDRMFYALETFCENLGDDIIPHLPTLMERLFGVLEPQ NSHRMREMGLTAIAAVSTAAKEHLVPYFPRIMSVLQGCLVKECPKEMQSL RIQAIDTLAALCREVGRDNIIPLADDTMNFCLMMLEDGPDDPEVRRSIYN LMSSLSSVVKESMATVFPKFIDRIMESVISSEDVLPNVSENPEDDLILoD TTDVEIDLDQTDDEDDQDCYQVENDYVFEKEEAILALREFAAHTGAAFAP YLQSAFENVYKMIDHPQGDVRKACIDAICGFITALHKLEDAAGLKRACEI AIPKFAHMLRTDDEVGVVLHLLDELGDVFKDVQLQAINNQEHAELIFGCI RDVFTNKMACQFNEESGGGDEEDSEESENDEMLFENAANLFPLFGLALQP ELFSLYFGRLYQFYVQRLAKAKERDIPEHRAYIYGALADSFKALKGCSAT YFDALCPIFITGSKDSDAKSRQNSYYALGELVIHSEEKSFESYPVILQAL SEAIVRESNPPALDNICGAVARLIVTNPDSVPLAQVLPVLLNHLPLKEDV IENDMIQKAFRVLYLKARPSIVAHLEQILVITIEAIYKKQMPDDETTESA VALIKEIRANYPEQFNQVSNANPEVFNYVQTL MrBayes v3.2.2 x64 (Bayesian Analysis of Phylogeny) Distributed under the GNU General Public License Type "help" or "help <command>" for information on the commands that are available. Type "about" for authorship and general information about the program. Executing file "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb" UNIX line termination Longest line length = 63 Parsing file Expecting NEXUS formatted file Reading data block Allocated taxon set Allocated matrix Defining new matrix with 5 taxa and 3249 characters Missing data coded as ? Data matrix is interleaved Data is Dna Gaps coded as - Matching characters coded as . Taxon 1 -> C1 Taxon 2 -> C2 Taxon 3 -> C3 Taxon 4 -> C4 Taxon 5 -> C5 Successfully read matrix Setting default partition (does not divide up characters) Setting model defaults Seed (for generating default start values) = 1477949339 Setting output file names to "/opt/ADOPS/116/CG32165-PA/batch/allfiles/mrbayes/input.fasta.fasta.mrb.run<i>.<p|t>" Exiting data block Reading mrbayes block Setting autoclose to yes Setting nowarnings to yes Defining charset called first_pos Defining charset called second_pos Defining charset called third_pos Defining partition called by_codon Setting by_codon as the partition, dividing characters into 3 parts. Setting model defaults Seed (for generating default start values) = 1305403167 Setting Nst to 6 for partition 1 Setting Nst to 6 for partition 2 Setting Nst to 6 for partition 3 Setting Rates to Invgamma for partition 1 Setting Rates to Invgamma for partition 2 Setting Rates to Invgamma for partition 3 Successfully set likelihood model parameters to all applicable data partitions Unlinking Setting number of generations to 1000000 Running Markov chain MCMC stamp = 9043374597 Seed = 1094797108 Swapseed = 1477949339 Model settings: Settings for partition 1 -- Datatype = DNA Nucmodel = 4by4 Nst = 6 Substitution rates, expressed as proportions of the rate sum, have a Dirichlet prior (1.00,1.00,1.00,1.00,1.00,1.00) Covarion = No # States = 4 State frequencies have a Dirichlet prior (1.00,1.00,1.00,1.00) Rates = Invgamma Gamma shape parameter is exponentially distributed with parameter (2.00). Proportion of invariable sites is uniformly dist- ributed on the interval (0.00,1.00). Gamma distribution is approximated using 4 categories. Likelihood summarized over all rate categories in each generation. Settings for partition 2 -- Datatype = DNA Nucmodel = 4by4 Nst = 6 Substitution rates, expressed as proportions of the rate sum, have a Dirichlet prior (1.00,1.00,1.00,1.00,1.00,1.00) Covarion = No # States = 4 State frequencies have a Dirichlet prior (1.00,1.00,1.00,1.00) Rates = Invgamma Gamma shape parameter is exponentially distributed with parameter (2.00). Proportion of invariable sites is uniformly dist- ributed on the interval (0.00,1.00). Gamma distribution is approximated using 4 categories. Likelihood summarized over all rate categories in each generation. Settings for partition 3 -- Datatype = DNA Nucmodel = 4by4 Nst = 6 Substitution rates, expressed as proportions of the rate sum, have a Dirichlet prior (1.00,1.00,1.00,1.00,1.00,1.00) Covarion = No # States = 4 State frequencies have a Dirichlet prior (1.00,1.00,1.00,1.00) Rates = Invgamma Gamma shape parameter is exponentially distributed with parameter (2.00). Proportion of invariable sites is uniformly dist- ributed on the interval (0.00,1.00). Gamma distribution is approximated using 4 categories. Likelihood summarized over all rate categories in each generation. Active parameters: Partition(s) Parameters 1 2 3 ------------------------ Revmat 1 1 1 Statefreq 2 2 2 Shape 3 3 4 Pinvar 5 5 5 Ratemultiplier 6 6 6 Topology 7 7 7 Brlens 8 8 8 ------------------------ Parameters can be linked or unlinked across partitions using 'link' and 'unlink' 1 -- Parameter = Revmat{all} Type = Rates of reversible rate matrix Prior = Dirichlet(1.00,1.00,1.00,1.00,1.00,1.00) Partitions = All 2 -- Parameter = Pi{all} Type = Stationary state frequencies Prior = Dirichlet Partitions = All 3 -- Parameter = Alpha{1,2} Type = Shape of scaled gamma distribution of site rates Prior = Exponential(2.00) Partitions = 1 and 2 4 -- Parameter = Alpha{3} Type = Shape of scaled gamma distribution of site rates Prior = Exponential(2.00) Partition = 3 5 -- Parameter = Pinvar{all} Type = Proportion of invariable sites Prior = Uniform(0.00,1.00) Partitions = All 6 -- Parameter = Ratemultiplier{all} Type = Partition-specific rate multiplier Prior = Fixed(1.0) Partitions = All 7 -- Parameter = Tau{all} Type = Topology Prior = All topologies equally probable a priori Partitions = All Subparam. = V{all} 8 -- Parameter = V{all} Type = Branch lengths Prior = Unconstrained:Exponential(10.0) Partitions = All The MCMC sampler will use the following moves: With prob. Chain will use move 1.06 % Dirichlet(Revmat{all}) 1.06 % Slider(Revmat{all}) 1.06 % Dirichlet(Pi{all}) 1.06 % Slider(Pi{all}) 2.13 % Multiplier(Alpha{1,2}) 2.13 % Multiplier(Alpha{3}) 2.13 % Slider(Pinvar{all}) 10.64 % ExtSPR(Tau{all},V{all}) 10.64 % ExtTBR(Tau{all},V{all}) 10.64 % NNI(Tau{all},V{all}) 10.64 % ParsSPR(Tau{all},V{all}) 31.91 % Multiplier(V{all}) 10.64 % Nodeslider(V{all}) 4.26 % TLMultiplier(V{all}) Division 1 has 73 unique site patterns Division 2 has 49 unique site patterns Division 3 has 102 unique site patterns Initializing conditional likelihoods Using standard SSE likelihood calculator for division 1 (single-precision) Using standard SSE likelihood calculator for division 2 (single-precision) Using standard SSE likelihood calculator for division 3 (single-precision) Initializing invariable-site conditional likelihoods Initial log likelihoods and log prior probs for run 1: Chain 1 -- -8829.189420 -- -25.624409 Chain 2 -- -9543.339249 -- -25.624409 Chain 3 -- -9405.673289 -- -25.624409 Chain 4 -- -9196.036162 -- -25.624409 Initial log likelihoods and log prior probs for run 2: Chain 1 -- -9415.826390 -- -25.624409 Chain 2 -- -9187.459734 -- -25.624409 Chain 3 -- -9196.036162 -- -25.624409 Chain 4 -- -8832.876897 -- -25.624409 Using a relative burnin of 25.0 % for diagnostics Chain results (1000000 generations requested): 0 -- [-8829.189] (-9543.339) (-9405.673) (-9196.036) * [-9415.826] (-9187.460) (-9196.036) (-8832.877) 500 -- (-7714.556) (-7713.775) [-7713.535] (-7722.084) * (-7724.756) (-7728.434) (-7742.142) [-7722.410] -- 0:33:19 1000 -- (-7698.227) (-7708.503) (-7702.672) [-7690.756] * [-7702.411] (-7707.719) (-7706.022) (-7708.988) -- 0:16:39 1500 -- (-7680.252) (-7684.016) [-7668.901] (-7681.164) * (-7694.044) (-7688.857) (-7685.149) [-7675.797] -- 0:11:05 2000 -- (-7671.379) (-7662.097) (-7662.841) [-7672.671] * [-7675.794] (-7684.041) (-7685.160) (-7662.945) -- 0:08:19 2500 -- (-7670.009) [-7662.703] (-7661.295) (-7667.403) * (-7667.809) (-7676.432) (-7671.945) [-7672.930] -- 0:06:39 3000 -- (-7658.563) [-7664.474] (-7662.337) (-7669.771) * [-7660.779] (-7670.140) (-7663.461) (-7667.134) -- 0:11:04 3500 -- (-7659.532) [-7663.157] (-7661.787) (-7651.882) * (-7656.538) (-7667.994) (-7656.818) [-7655.894] -- 0:09:29 4000 -- (-7655.396) (-7657.877) [-7655.246] (-7659.060) * (-7659.107) (-7663.503) [-7658.700] (-7659.421) -- 0:08:18 4500 -- (-7655.548) (-7657.867) (-7661.487) [-7656.037] * (-7654.350) (-7662.627) [-7658.853] (-7663.126) -- 0:07:22 5000 -- [-7654.674] (-7654.005) (-7659.382) (-7652.998) * [-7658.747] (-7658.824) (-7661.670) (-7663.643) -- 0:06:38 Average standard deviation of split frequencies: 0.000000 5500 -- (-7661.671) (-7658.429) (-7661.697) [-7655.085] * (-7668.290) (-7658.901) [-7658.423] (-7665.081) -- 0:06:01 6000 -- [-7659.601] (-7657.897) (-7659.516) (-7662.676) * (-7663.979) [-7657.889] (-7659.664) (-7661.600) -- 0:08:17 6500 -- [-7658.550] (-7657.536) (-7664.877) (-7659.327) * (-7658.992) (-7655.093) [-7658.004] (-7658.305) -- 0:07:38 7000 -- (-7656.733) (-7654.814) [-7657.518] (-7658.917) * (-7657.960) [-7658.173] (-7658.930) (-7657.911) -- 0:07:05 7500 -- (-7654.312) [-7659.724] (-7666.573) (-7656.597) * (-7657.639) (-7656.340) [-7661.807] (-7656.443) -- 0:06:37 8000 -- (-7656.423) [-7661.998] (-7667.133) (-7661.103) * (-7656.507) (-7657.412) (-7663.908) [-7664.718] -- 0:06:12 8500 -- [-7654.878] (-7660.917) (-7657.178) (-7666.520) * [-7652.834] (-7660.704) (-7660.813) (-7665.350) -- 0:05:49 9000 -- [-7653.325] (-7657.070) (-7658.370) (-7661.146) * (-7653.548) (-7660.759) (-7667.237) [-7657.933] -- 0:07:20 9500 -- (-7658.772) [-7654.511] (-7655.069) (-7657.899) * (-7658.480) (-7662.872) [-7662.065] (-7656.285) -- 0:06:57 10000 -- [-7662.009] (-7656.379) (-7659.175) (-7657.405) * (-7657.963) [-7655.674] (-7656.655) (-7659.962) -- 0:06:36 Average standard deviation of split frequencies: 0.000000 10500 -- (-7668.182) (-7656.812) [-7656.235] (-7657.508) * (-7656.381) (-7656.094) (-7668.424) [-7658.580] -- 0:06:16 11000 -- [-7658.144] (-7658.619) (-7660.525) (-7657.038) * [-7656.577] (-7660.230) (-7656.407) (-7665.193) -- 0:05:59 11500 -- (-7660.148) (-7657.079) (-7659.831) [-7660.411] * (-7654.099) (-7660.604) (-7657.793) [-7663.849] -- 0:05:43 12000 -- [-7664.387] (-7659.697) (-7662.881) (-7657.547) * [-7660.454] (-7658.526) (-7657.450) (-7662.470) -- 0:06:51 12500 -- (-7658.692) (-7661.393) [-7654.058] (-7658.029) * (-7656.652) (-7654.938) (-7658.954) [-7663.875] -- 0:06:35 13000 -- (-7660.055) (-7659.079) (-7654.626) [-7659.715] * (-7661.950) [-7653.383] (-7656.048) (-7658.945) -- 0:06:19 13500 -- [-7656.094] (-7658.493) (-7659.492) (-7660.571) * (-7665.741) (-7652.890) (-7655.803) [-7655.990] -- 0:06:05 14000 -- (-7655.037) (-7661.548) (-7660.102) [-7660.158] * (-7663.646) [-7655.801] (-7654.893) (-7656.855) -- 0:05:52 14500 -- [-7661.758] (-7663.470) (-7653.541) (-7665.220) * (-7663.015) [-7669.839] (-7657.908) (-7655.569) -- 0:05:39 15000 -- (-7662.081) (-7658.418) (-7658.944) [-7655.693] * (-7655.279) [-7665.028] (-7659.528) (-7657.440) -- 0:06:34 Average standard deviation of split frequencies: 0.000000 15500 -- (-7658.053) (-7655.087) [-7654.247] (-7662.022) * [-7658.944] (-7665.645) (-7660.281) (-7656.757) -- 0:06:21 16000 -- (-7659.356) [-7660.914] (-7652.601) (-7666.539) * (-7659.441) (-7658.743) [-7658.142] (-7655.577) -- 0:06:09 16500 -- (-7665.596) (-7661.335) (-7655.406) [-7654.489] * (-7659.936) (-7653.952) [-7663.351] (-7653.264) -- 0:05:57 17000 -- [-7659.038] (-7655.874) (-7656.830) (-7660.693) * (-7656.489) (-7658.767) (-7657.327) [-7651.634] -- 0:05:46 17500 -- (-7659.727) [-7661.361] (-7656.544) (-7664.796) * (-7654.477) (-7661.446) [-7657.434] (-7651.690) -- 0:05:36 18000 -- [-7658.831] (-7660.811) (-7656.771) (-7663.708) * (-7656.592) (-7665.703) (-7655.852) [-7653.270] -- 0:06:21 18500 -- (-7661.807) (-7656.474) (-7659.150) [-7657.482] * [-7654.993] (-7656.329) (-7653.353) (-7656.432) -- 0:06:11 19000 -- (-7653.640) (-7658.007) [-7654.513] (-7659.867) * (-7653.728) (-7655.486) (-7655.988) [-7661.404] -- 0:06:01 19500 -- (-7657.953) (-7660.458) (-7667.092) [-7652.778] * (-7653.011) (-7662.335) [-7655.860] (-7658.522) -- 0:05:51 20000 -- (-7659.059) (-7654.770) [-7656.905] (-7656.879) * [-7658.238] (-7669.234) (-7656.488) (-7655.801) -- 0:05:43 Average standard deviation of split frequencies: 0.000000 20500 -- [-7655.495] (-7650.918) (-7661.933) (-7657.438) * (-7658.337) [-7657.085] (-7663.758) (-7653.516) -- 0:05:34 21000 -- (-7663.735) [-7655.526] (-7659.567) (-7662.206) * (-7657.896) (-7665.741) (-7657.553) [-7654.619] -- 0:06:12 21500 -- (-7658.573) [-7655.636] (-7660.088) (-7654.961) * (-7656.337) (-7662.864) (-7653.635) [-7658.413] -- 0:06:04 22000 -- (-7655.300) (-7658.529) (-7661.007) [-7660.774] * (-7659.732) (-7656.757) (-7658.090) [-7657.215] -- 0:05:55 22500 -- (-7657.600) (-7654.149) (-7660.974) [-7652.869] * [-7657.050] (-7656.596) (-7658.333) (-7651.261) -- 0:05:47 23000 -- [-7652.367] (-7657.422) (-7660.950) (-7658.354) * (-7659.467) (-7656.265) [-7656.521] (-7656.620) -- 0:05:39 23500 -- (-7657.968) (-7658.664) [-7660.941] (-7656.621) * [-7672.875] (-7656.733) (-7664.580) (-7655.988) -- 0:05:32 24000 -- [-7660.939] (-7653.481) (-7665.997) (-7660.887) * (-7664.238) (-7664.011) [-7658.444] (-7656.827) -- 0:06:06 24500 -- (-7657.255) (-7655.553) (-7657.842) [-7656.780] * (-7661.260) [-7655.668] (-7655.858) (-7658.025) -- 0:05:58 25000 -- (-7657.090) (-7657.468) (-7659.832) [-7655.357] * (-7659.523) (-7658.070) [-7655.083] (-7657.600) -- 0:05:51 Average standard deviation of split frequencies: 0.000000 25500 -- (-7658.001) (-7653.651) (-7661.768) [-7653.881] * (-7660.321) (-7654.705) [-7657.581] (-7663.673) -- 0:05:43 26000 -- (-7660.928) [-7656.476] (-7657.489) (-7659.932) * (-7671.033) [-7656.697] (-7658.716) (-7663.101) -- 0:05:37 26500 -- (-7656.891) (-7666.341) [-7655.900] (-7660.380) * (-7662.145) (-7658.988) (-7657.314) [-7659.144] -- 0:06:07 27000 -- (-7666.138) (-7655.904) (-7654.273) [-7663.968] * (-7659.699) [-7664.726] (-7660.603) (-7654.718) -- 0:06:00 27500 -- (-7662.234) [-7658.253] (-7658.021) (-7657.212) * (-7665.092) (-7660.762) (-7656.974) [-7655.082] -- 0:05:53 28000 -- (-7656.368) [-7657.898] (-7657.327) (-7665.350) * (-7659.483) [-7653.624] (-7656.234) (-7662.930) -- 0:05:47 28500 -- [-7658.052] (-7661.422) (-7661.213) (-7660.002) * (-7659.516) (-7655.794) [-7655.284] (-7658.930) -- 0:05:40 29000 -- (-7656.397) [-7659.828] (-7656.090) (-7655.469) * (-7658.068) (-7655.954) (-7656.633) [-7655.008] -- 0:05:34 29500 -- [-7654.143] (-7661.179) (-7660.049) (-7662.052) * [-7655.774] (-7656.018) (-7656.782) (-7658.061) -- 0:06:01 30000 -- [-7659.849] (-7663.553) (-7654.168) (-7659.813) * (-7656.396) (-7663.291) (-7660.872) [-7656.792] -- 0:05:55 Average standard deviation of split frequencies: 0.000000 30500 -- (-7662.569) (-7665.861) [-7659.565] (-7658.948) * (-7657.470) (-7656.144) (-7661.945) [-7665.140] -- 0:05:49 31000 -- (-7663.284) (-7658.109) (-7654.883) [-7656.031] * (-7659.478) (-7662.370) (-7659.200) [-7661.098] -- 0:05:43 31500 -- (-7659.154) [-7656.240] (-7663.869) (-7656.498) * [-7663.379] (-7656.431) (-7658.209) (-7658.886) -- 0:05:38 32000 -- (-7663.309) (-7653.504) [-7657.016] (-7656.204) * [-7661.441] (-7660.204) (-7659.727) (-7663.187) -- 0:05:32 32500 -- [-7660.123] (-7653.875) (-7652.984) (-7659.029) * (-7653.696) (-7663.847) [-7665.243] (-7658.585) -- 0:05:57 33000 -- (-7665.057) [-7654.138] (-7661.030) (-7655.588) * (-7652.772) (-7664.153) (-7660.829) [-7663.888] -- 0:05:51 33500 -- [-7662.664] (-7658.845) (-7660.178) (-7655.889) * (-7653.194) (-7662.342) [-7659.242] (-7657.861) -- 0:05:46 34000 -- [-7660.470] (-7657.373) (-7663.219) (-7658.837) * [-7653.994] (-7659.222) (-7660.595) (-7662.183) -- 0:05:40 34500 -- (-7657.203) [-7661.619] (-7658.880) (-7660.938) * (-7656.809) (-7658.525) [-7661.554] (-7658.403) -- 0:05:35 35000 -- (-7655.825) (-7661.236) [-7655.481] (-7656.904) * (-7662.616) (-7657.271) (-7662.725) [-7658.973] -- 0:05:58 Average standard deviation of split frequencies: 0.000000 35500 -- (-7654.740) (-7661.401) [-7654.929] (-7658.467) * (-7656.374) (-7658.105) [-7657.125] (-7654.907) -- 0:05:53 36000 -- (-7655.287) (-7664.156) (-7659.199) [-7656.745] * [-7661.915] (-7663.367) (-7666.693) (-7657.403) -- 0:05:48 36500 -- (-7655.113) [-7656.274] (-7656.991) (-7654.599) * (-7655.461) (-7657.572) [-7668.172] (-7655.049) -- 0:05:43 37000 -- (-7657.425) (-7661.896) [-7656.752] (-7656.877) * (-7658.422) [-7656.816] (-7662.577) (-7656.548) -- 0:05:38 37500 -- (-7657.022) (-7663.200) [-7658.693] (-7658.556) * (-7663.122) (-7660.685) [-7659.368] (-7657.299) -- 0:05:33 38000 -- (-7668.644) (-7656.927) (-7659.795) [-7655.988] * [-7659.998] (-7659.847) (-7661.920) (-7660.276) -- 0:05:54 38500 -- (-7660.491) (-7656.732) (-7661.303) [-7656.129] * (-7666.266) [-7655.841] (-7669.884) (-7660.930) -- 0:05:49 39000 -- [-7663.973] (-7670.593) (-7661.592) (-7653.205) * (-7658.589) (-7653.648) [-7658.081] (-7660.174) -- 0:05:44 39500 -- (-7666.468) (-7654.317) (-7658.278) [-7653.467] * [-7656.654] (-7662.333) (-7654.549) (-7657.246) -- 0:05:40 40000 -- (-7657.315) (-7652.653) (-7655.619) [-7660.684] * (-7664.880) (-7667.988) [-7658.708] (-7665.069) -- 0:05:36 Average standard deviation of split frequencies: 0.000000 40500 -- (-7653.516) (-7657.640) (-7657.450) [-7658.278] * [-7657.824] (-7659.258) (-7655.023) (-7653.589) -- 0:05:31 41000 -- (-7657.538) (-7653.580) (-7667.137) [-7659.948] * (-7663.259) (-7680.443) [-7655.766] (-7658.035) -- 0:05:50 41500 -- (-7666.000) (-7654.507) (-7659.559) [-7653.296] * [-7661.739] (-7660.761) (-7656.415) (-7659.368) -- 0:05:46 42000 -- (-7660.236) [-7656.661] (-7663.084) (-7659.073) * (-7658.012) (-7661.894) [-7651.354] (-7657.043) -- 0:05:42 42500 -- (-7657.993) (-7652.717) [-7658.698] (-7661.254) * (-7656.537) (-7661.778) [-7656.054] (-7657.960) -- 0:05:37 43000 -- (-7655.833) [-7655.417] (-7661.820) (-7658.981) * (-7652.842) (-7659.765) (-7657.629) [-7662.611] -- 0:05:33 43500 -- (-7660.605) [-7651.596] (-7653.516) (-7661.742) * (-7655.612) (-7654.026) [-7659.042] (-7657.969) -- 0:05:51 44000 -- (-7655.948) (-7656.295) [-7654.273] (-7658.864) * [-7659.553] (-7658.331) (-7658.847) (-7668.344) -- 0:05:47 44500 -- [-7659.858] (-7663.447) (-7657.864) (-7657.980) * (-7658.394) (-7655.850) (-7654.592) [-7654.695] -- 0:05:43 45000 -- (-7656.736) [-7658.338] (-7657.583) (-7667.825) * (-7655.835) (-7656.929) (-7657.485) [-7655.203] -- 0:05:39 Average standard deviation of split frequencies: 0.000000 45500 -- [-7658.756] (-7654.678) (-7656.757) (-7660.363) * (-7657.829) [-7654.995] (-7657.367) (-7652.612) -- 0:05:35 46000 -- (-7662.805) (-7654.850) [-7659.747] (-7659.448) * [-7657.847] (-7659.762) (-7661.164) (-7656.509) -- 0:05:52 46500 -- (-7662.614) (-7660.461) (-7662.293) [-7667.374] * (-7660.681) (-7656.985) (-7657.832) [-7660.663] -- 0:05:48 47000 -- [-7661.215] (-7661.310) (-7662.565) (-7655.806) * (-7655.880) (-7653.409) (-7668.729) [-7654.767] -- 0:05:44 47500 -- (-7655.494) (-7657.464) (-7657.970) [-7661.704] * [-7654.403] (-7661.450) (-7656.508) (-7654.494) -- 0:05:40 48000 -- [-7653.514] (-7661.338) (-7664.057) (-7657.331) * (-7656.334) (-7659.648) [-7657.929] (-7657.029) -- 0:05:37 48500 -- (-7658.409) (-7663.932) (-7668.558) [-7655.117] * (-7662.423) (-7657.437) (-7661.146) [-7657.296] -- 0:05:53 49000 -- (-7655.603) (-7664.896) [-7655.915] (-7661.255) * (-7655.968) [-7656.313] (-7654.679) (-7658.589) -- 0:05:49 49500 -- (-7655.359) [-7659.646] (-7657.964) (-7661.760) * (-7659.978) (-7654.115) (-7656.216) [-7655.916] -- 0:05:45 50000 -- (-7666.107) (-7661.143) [-7652.210] (-7671.924) * (-7662.034) [-7655.953] (-7660.286) (-7658.200) -- 0:05:42 Average standard deviation of split frequencies: 0.000000 50500 -- (-7657.262) [-7654.612] (-7656.773) (-7666.440) * [-7656.865] (-7663.871) (-7661.571) (-7658.369) -- 0:05:38 51000 -- (-7654.198) (-7658.316) [-7659.936] (-7660.121) * (-7659.843) [-7655.711] (-7658.803) (-7656.368) -- 0:05:34 51500 -- (-7657.563) (-7663.716) (-7659.219) [-7658.937] * [-7656.754] (-7656.175) (-7658.948) (-7663.354) -- 0:05:49 52000 -- (-7661.643) (-7658.261) [-7652.336] (-7665.439) * (-7661.839) (-7657.182) (-7657.664) [-7659.693] -- 0:05:46 52500 -- (-7661.201) (-7654.154) (-7654.680) [-7659.870] * [-7658.066] (-7662.263) (-7657.845) (-7658.869) -- 0:05:42 53000 -- (-7665.742) (-7658.796) (-7660.991) [-7657.127] * (-7658.672) [-7663.631] (-7653.328) (-7663.798) -- 0:05:39 53500 -- (-7660.243) (-7660.918) [-7659.476] (-7657.497) * (-7661.007) [-7661.170] (-7660.822) (-7659.326) -- 0:05:36 54000 -- (-7656.974) (-7658.205) (-7662.273) [-7657.837] * [-7658.257] (-7660.463) (-7656.677) (-7669.272) -- 0:05:32 54500 -- (-7667.453) [-7653.211] (-7658.387) (-7664.765) * (-7659.716) (-7661.427) (-7656.829) [-7659.972] -- 0:05:46 55000 -- (-7658.820) (-7654.286) [-7659.935] (-7662.495) * [-7660.080] (-7661.928) (-7658.241) (-7657.727) -- 0:05:43 Average standard deviation of split frequencies: 0.000000 55500 -- (-7661.198) [-7653.602] (-7662.841) (-7668.190) * (-7657.381) (-7662.879) (-7656.618) [-7661.089] -- 0:05:40 56000 -- (-7658.864) (-7656.035) [-7661.096] (-7660.126) * [-7653.167] (-7662.112) (-7657.516) (-7655.687) -- 0:05:37 56500 -- (-7664.923) [-7662.313] (-7660.076) (-7655.913) * (-7653.315) (-7665.151) [-7655.333] (-7657.130) -- 0:05:33 57000 -- (-7654.716) [-7660.261] (-7658.000) (-7657.738) * [-7655.940] (-7660.608) (-7659.157) (-7662.438) -- 0:05:30 57500 -- (-7656.530) [-7655.703] (-7666.610) (-7661.499) * (-7667.635) (-7658.789) (-7659.711) [-7657.324] -- 0:05:44 58000 -- (-7663.760) [-7659.364] (-7655.730) (-7658.524) * (-7659.276) (-7660.515) [-7661.414] (-7659.910) -- 0:05:41 58500 -- (-7663.612) (-7659.182) (-7654.623) [-7659.016] * (-7656.234) (-7656.555) [-7658.358] (-7664.560) -- 0:05:37 59000 -- (-7655.299) (-7660.006) [-7653.896] (-7668.224) * [-7658.448] (-7662.739) (-7660.121) (-7666.867) -- 0:05:34 59500 -- (-7656.797) [-7661.481] (-7658.803) (-7659.885) * [-7655.404] (-7655.856) (-7658.850) (-7662.683) -- 0:05:31 60000 -- (-7662.178) (-7658.531) [-7657.037] (-7659.392) * [-7658.984] (-7660.089) (-7657.705) (-7655.552) -- 0:05:29 Average standard deviation of split frequencies: 0.000000 60500 -- (-7661.350) [-7658.407] (-7658.758) (-7653.653) * (-7653.030) (-7659.008) [-7661.458] (-7662.259) -- 0:05:41 61000 -- [-7659.097] (-7663.277) (-7661.516) (-7660.567) * (-7659.425) (-7657.486) (-7655.728) [-7657.334] -- 0:05:38 61500 -- (-7654.321) [-7665.367] (-7663.908) (-7668.272) * (-7654.083) (-7656.988) [-7654.119] (-7653.548) -- 0:05:35 62000 -- [-7653.356] (-7658.553) (-7661.597) (-7656.169) * (-7665.572) [-7659.762] (-7656.848) (-7661.503) -- 0:05:32 62500 -- [-7653.692] (-7656.136) (-7660.240) (-7659.185) * (-7655.019) [-7657.663] (-7656.696) (-7660.118) -- 0:05:30 63000 -- [-7653.547] (-7660.832) (-7665.531) (-7653.805) * (-7656.217) [-7656.378] (-7655.149) (-7659.014) -- 0:05:27 63500 -- (-7663.675) [-7657.718] (-7663.590) (-7657.911) * (-7654.596) (-7653.787) (-7657.577) [-7658.527] -- 0:05:39 64000 -- [-7658.407] (-7658.265) (-7660.050) (-7662.577) * (-7654.162) (-7656.436) (-7661.464) [-7656.903] -- 0:05:36 64500 -- (-7657.581) [-7664.454] (-7661.471) (-7665.981) * (-7661.770) (-7661.903) (-7663.288) [-7654.395] -- 0:05:33 65000 -- (-7654.926) (-7657.508) [-7655.320] (-7662.564) * (-7659.604) (-7655.326) [-7661.321] (-7656.090) -- 0:05:30 Average standard deviation of split frequencies: 0.000000 65500 -- (-7660.533) [-7663.089] (-7658.567) (-7670.738) * [-7660.083] (-7658.022) (-7658.088) (-7657.040) -- 0:05:28 66000 -- (-7661.558) (-7651.592) (-7658.018) [-7658.848] * (-7659.184) (-7653.972) [-7652.705] (-7656.600) -- 0:05:25 66500 -- (-7657.374) [-7651.861] (-7660.289) (-7658.615) * (-7660.204) (-7659.046) [-7656.243] (-7657.332) -- 0:05:36 67000 -- (-7664.804) (-7655.020) (-7667.086) [-7657.570] * (-7654.305) (-7657.796) [-7652.805] (-7654.706) -- 0:05:34 67500 -- (-7660.061) [-7660.166] (-7666.534) (-7652.513) * (-7655.087) (-7660.131) [-7653.465] (-7656.499) -- 0:05:31 68000 -- [-7661.268] (-7656.823) (-7662.918) (-7655.411) * (-7657.037) (-7661.686) [-7653.280] (-7664.185) -- 0:05:28 68500 -- (-7657.394) (-7655.210) [-7660.336] (-7657.073) * (-7655.806) (-7658.966) [-7657.130] (-7661.001) -- 0:05:39 69000 -- (-7662.346) (-7655.188) [-7654.558] (-7656.613) * (-7658.227) (-7659.578) [-7654.943] (-7660.822) -- 0:05:37 69500 -- (-7660.297) (-7660.565) [-7658.597] (-7652.438) * (-7661.293) [-7662.687] (-7654.916) (-7666.551) -- 0:05:34 70000 -- (-7657.512) (-7658.657) [-7660.168] (-7658.451) * (-7658.892) [-7655.750] (-7657.054) (-7669.633) -- 0:05:32 Average standard deviation of split frequencies: 0.000000 70500 -- (-7656.914) (-7657.340) [-7657.096] (-7667.136) * [-7658.778] (-7657.947) (-7660.098) (-7660.708) -- 0:05:42 71000 -- [-7652.618] (-7658.777) (-7656.908) (-7661.129) * (-7663.986) [-7662.725] (-7662.435) (-7659.093) -- 0:05:40 71500 -- [-7656.381] (-7659.997) (-7657.475) (-7661.323) * (-7665.955) [-7656.569] (-7657.353) (-7654.572) -- 0:05:37 72000 -- (-7656.444) (-7663.265) [-7654.934] (-7656.639) * (-7660.668) (-7659.165) (-7662.206) [-7659.618] -- 0:05:35 72500 -- (-7654.775) (-7654.815) [-7655.752] (-7654.328) * (-7660.766) (-7655.091) (-7653.664) [-7659.533] -- 0:05:45 73000 -- [-7656.242] (-7663.401) (-7661.564) (-7661.224) * (-7658.113) [-7652.974] (-7658.010) (-7662.768) -- 0:05:42 73500 -- [-7660.212] (-7657.375) (-7656.422) (-7653.829) * (-7662.721) (-7656.639) [-7654.616] (-7657.625) -- 0:05:40 74000 -- [-7652.707] (-7657.090) (-7654.395) (-7658.371) * (-7658.542) [-7660.245] (-7659.961) (-7656.945) -- 0:05:37 74500 -- [-7653.574] (-7661.840) (-7662.867) (-7658.514) * [-7655.085] (-7661.610) (-7659.642) (-7656.303) -- 0:05:35 75000 -- (-7655.700) (-7657.429) (-7660.814) [-7655.233] * [-7655.746] (-7660.283) (-7655.599) (-7661.864) -- 0:05:45 Average standard deviation of split frequencies: 0.000000 75500 -- (-7664.779) [-7660.517] (-7664.657) (-7654.822) * (-7666.042) (-7666.329) (-7655.732) [-7657.964] -- 0:05:42 76000 -- [-7661.336] (-7660.785) (-7657.074) (-7658.343) * [-7663.277] (-7664.012) (-7661.069) (-7663.834) -- 0:05:40 76500 -- (-7662.614) (-7662.799) [-7661.350] (-7657.583) * (-7656.679) (-7653.503) [-7665.562] (-7662.679) -- 0:05:38 77000 -- (-7655.232) (-7669.955) [-7661.894] (-7655.508) * (-7662.444) [-7656.458] (-7658.449) (-7657.035) -- 0:05:35 77500 -- (-7662.061) (-7668.169) (-7662.765) [-7651.787] * [-7654.290] (-7657.320) (-7654.190) (-7661.722) -- 0:05:45 78000 -- (-7656.312) (-7662.599) [-7664.162] (-7655.996) * (-7653.159) (-7656.608) (-7667.322) [-7654.995] -- 0:05:42 78500 -- [-7659.202] (-7664.992) (-7656.875) (-7654.957) * (-7655.026) (-7652.882) [-7660.153] (-7656.873) -- 0:05:40 79000 -- (-7662.799) (-7668.050) [-7658.194] (-7654.583) * [-7658.070] (-7663.728) (-7657.009) (-7661.695) -- 0:05:38 79500 -- (-7660.253) (-7662.846) (-7656.818) [-7654.570] * (-7655.097) (-7658.146) (-7661.376) [-7658.229] -- 0:05:35 80000 -- (-7663.442) (-7662.405) (-7662.670) [-7656.474] * (-7665.432) (-7657.306) (-7652.521) [-7661.691] -- 0:05:33 Average standard deviation of split frequencies: 0.000000 80500 -- (-7664.269) (-7659.226) (-7657.022) [-7655.297] * [-7656.732] (-7659.582) (-7656.565) (-7663.084) -- 0:05:31 81000 -- (-7662.438) [-7662.815] (-7658.334) (-7655.539) * (-7656.673) (-7657.025) [-7651.417] (-7655.121) -- 0:05:40 81500 -- (-7656.696) (-7660.625) [-7653.173] (-7661.301) * (-7653.626) [-7656.060] (-7658.007) (-7658.128) -- 0:05:38 82000 -- (-7657.235) [-7656.686] (-7664.097) (-7655.241) * (-7655.836) [-7661.850] (-7662.872) (-7659.357) -- 0:05:35 82500 -- (-7654.828) (-7654.981) (-7659.247) [-7655.335] * (-7663.313) (-7659.719) [-7656.131] (-7653.921) -- 0:05:33 83000 -- (-7659.137) (-7654.361) [-7660.415] (-7655.890) * (-7660.107) (-7658.232) (-7663.029) [-7655.950] -- 0:05:31 83500 -- (-7663.980) (-7657.724) [-7654.203] (-7655.928) * (-7660.543) (-7662.549) [-7655.491] (-7660.909) -- 0:05:29 84000 -- (-7658.133) [-7656.612] (-7658.422) (-7669.924) * [-7661.099] (-7667.160) (-7662.167) (-7655.487) -- 0:05:38 84500 -- [-7662.101] (-7659.719) (-7658.746) (-7669.027) * [-7658.397] (-7656.790) (-7662.867) (-7655.202) -- 0:05:35 85000 -- [-7658.866] (-7663.722) (-7655.416) (-7672.919) * [-7658.426] (-7659.946) (-7657.587) (-7654.651) -- 0:05:33 Average standard deviation of split frequencies: 0.000000 85500 -- [-7659.697] (-7659.930) (-7657.401) (-7662.648) * (-7656.144) [-7655.399] (-7658.495) (-7657.270) -- 0:05:31 86000 -- (-7659.725) (-7660.574) [-7657.174] (-7659.645) * (-7658.694) (-7656.431) [-7656.603] (-7660.895) -- 0:05:29 86500 -- [-7655.446] (-7660.782) (-7657.940) (-7657.514) * (-7661.687) (-7675.065) [-7657.703] (-7660.508) -- 0:05:27 87000 -- (-7651.380) (-7659.424) [-7660.576] (-7660.688) * (-7665.175) [-7660.961] (-7655.868) (-7662.133) -- 0:05:35 87500 -- (-7653.236) (-7663.478) [-7657.609] (-7656.506) * (-7655.025) (-7659.189) (-7659.733) [-7656.346] -- 0:05:33 88000 -- (-7653.996) (-7658.444) [-7659.113] (-7657.351) * (-7656.503) (-7656.218) (-7659.636) [-7657.839] -- 0:05:31 88500 -- [-7658.272] (-7657.443) (-7663.503) (-7656.745) * (-7661.892) (-7654.540) [-7656.780] (-7661.172) -- 0:05:29 89000 -- [-7655.902] (-7654.478) (-7664.543) (-7654.745) * [-7653.260] (-7657.286) (-7654.581) (-7656.880) -- 0:05:27 89500 -- (-7654.582) (-7654.337) [-7660.931] (-7664.999) * (-7657.717) [-7653.383] (-7660.852) (-7656.280) -- 0:05:35 90000 -- (-7665.069) (-7653.865) (-7663.450) [-7655.696] * (-7660.561) [-7656.687] (-7670.276) (-7657.886) -- 0:05:33 Average standard deviation of split frequencies: 0.000000 90500 -- (-7655.747) (-7659.230) (-7658.376) [-7656.245] * (-7657.947) (-7655.442) [-7659.203] (-7658.075) -- 0:05:31 91000 -- (-7655.934) (-7662.039) [-7658.362] (-7654.065) * [-7658.840] (-7660.808) (-7659.343) (-7653.791) -- 0:05:29 91500 -- [-7655.022] (-7656.121) (-7654.612) (-7661.860) * (-7658.219) (-7657.925) [-7654.747] (-7656.634) -- 0:05:27 92000 -- (-7666.893) [-7660.924] (-7656.754) (-7656.961) * [-7652.345] (-7664.321) (-7659.160) (-7657.862) -- 0:05:35 92500 -- (-7664.000) (-7656.941) [-7657.213] (-7664.620) * [-7659.674] (-7659.699) (-7659.811) (-7662.702) -- 0:05:33 93000 -- (-7661.110) (-7659.028) [-7654.539] (-7669.288) * (-7659.050) [-7659.564] (-7657.794) (-7660.536) -- 0:05:31 93500 -- (-7657.833) [-7656.167] (-7660.819) (-7667.166) * (-7658.676) (-7656.857) (-7658.514) [-7656.235] -- 0:05:29 94000 -- (-7660.217) (-7655.963) [-7657.526] (-7657.292) * (-7656.320) (-7655.010) (-7657.114) [-7656.603] -- 0:05:27 94500 -- [-7655.749] (-7658.173) (-7656.700) (-7664.777) * (-7659.406) (-7666.059) [-7664.434] (-7658.274) -- 0:05:25 95000 -- [-7657.823] (-7660.413) (-7657.853) (-7663.542) * (-7660.947) (-7665.089) (-7664.228) [-7658.009] -- 0:05:33 Average standard deviation of split frequencies: 0.000000 95500 -- [-7659.054] (-7660.111) (-7656.737) (-7665.848) * (-7654.933) (-7667.822) (-7662.271) [-7659.862] -- 0:05:31 96000 -- (-7663.166) (-7661.071) [-7662.058] (-7664.891) * [-7661.562] (-7657.362) (-7660.025) (-7655.941) -- 0:05:29 96500 -- (-7658.477) (-7658.838) [-7659.141] (-7662.785) * (-7664.295) (-7656.742) [-7655.241] (-7656.064) -- 0:05:27 97000 -- [-7657.322] (-7664.389) (-7657.773) (-7659.774) * (-7655.835) [-7653.211] (-7653.704) (-7656.080) -- 0:05:25 97500 -- (-7657.971) [-7654.721] (-7663.903) (-7660.665) * [-7660.352] (-7659.924) (-7656.215) (-7654.462) -- 0:05:23 98000 -- (-7658.455) (-7655.172) (-7656.657) [-7655.808] * (-7659.741) [-7658.935] (-7658.152) (-7662.709) -- 0:05:31 98500 -- (-7657.962) (-7656.803) (-7658.257) [-7655.382] * (-7654.634) [-7660.299] (-7655.784) (-7651.139) -- 0:05:29 99000 -- (-7663.538) [-7653.420] (-7654.715) (-7654.735) * [-7656.434] (-7659.628) (-7656.374) (-7658.158) -- 0:05:27 99500 -- (-7660.280) (-7661.192) [-7655.692] (-7656.632) * [-7654.380] (-7663.720) (-7655.558) (-7664.672) -- 0:05:25 100000 -- (-7662.643) (-7672.773) [-7658.828] (-7661.513) * (-7657.484) [-7662.308] (-7661.072) (-7660.083) -- 0:05:24 Average standard deviation of split frequencies: 0.000000 100500 -- [-7659.114] (-7659.546) (-7660.026) (-7664.789) * (-7661.509) (-7664.245) (-7658.794) [-7659.010] -- 0:05:22 101000 -- [-7656.397] (-7658.044) (-7657.086) (-7659.999) * [-7657.011] (-7668.480) (-7657.802) (-7659.264) -- 0:05:29 101500 -- (-7661.712) (-7660.696) (-7657.504) [-7657.083] * (-7657.276) [-7661.470] (-7654.811) (-7654.330) -- 0:05:27 102000 -- (-7657.826) [-7656.139] (-7660.566) (-7662.980) * (-7657.007) (-7656.460) (-7657.290) [-7658.391] -- 0:05:25 102500 -- (-7664.788) (-7660.111) (-7657.706) [-7657.286] * (-7657.118) [-7658.206] (-7663.749) (-7656.964) -- 0:05:23 103000 -- (-7660.023) (-7659.497) [-7656.255] (-7664.622) * (-7658.567) (-7661.348) (-7662.760) [-7655.689] -- 0:05:22 103500 -- (-7671.812) (-7657.587) (-7661.625) [-7659.959] * (-7659.083) (-7659.811) (-7663.500) [-7653.148] -- 0:05:20 104000 -- (-7657.014) [-7652.902] (-7661.186) (-7657.077) * (-7664.594) (-7659.857) (-7657.660) [-7658.768] -- 0:05:27 104500 -- [-7662.262] (-7658.698) (-7661.965) (-7663.907) * (-7658.559) (-7658.136) [-7658.273] (-7655.103) -- 0:05:25 105000 -- (-7658.602) [-7656.831] (-7666.288) (-7661.315) * (-7660.045) (-7659.141) (-7655.771) [-7657.168] -- 0:05:23 Average standard deviation of split frequencies: 0.000000 105500 -- (-7655.865) (-7660.759) [-7661.803] (-7654.523) * [-7658.563] (-7662.500) (-7652.580) (-7661.460) -- 0:05:22 106000 -- (-7661.204) (-7660.104) (-7668.416) [-7662.461] * (-7655.059) (-7661.418) [-7651.913] (-7659.857) -- 0:05:20 106500 -- [-7660.052] (-7660.332) (-7668.222) (-7661.327) * (-7657.739) (-7656.185) (-7656.760) [-7657.288] -- 0:05:18 107000 -- (-7660.095) (-7656.860) (-7660.769) [-7664.781] * (-7664.215) [-7656.091] (-7653.309) (-7656.285) -- 0:05:25 107500 -- [-7656.131] (-7663.252) (-7660.025) (-7659.708) * [-7661.859] (-7657.574) (-7657.181) (-7655.679) -- 0:05:23 108000 -- [-7655.062] (-7662.072) (-7658.622) (-7662.505) * (-7661.421) (-7657.606) [-7653.543] (-7653.584) -- 0:05:22 108500 -- (-7654.908) (-7664.577) (-7664.709) [-7655.806] * [-7655.924] (-7662.351) (-7655.697) (-7656.534) -- 0:05:20 109000 -- [-7657.715] (-7660.284) (-7660.358) (-7654.893) * (-7659.786) [-7656.500] (-7660.150) (-7655.397) -- 0:05:18 109500 -- [-7654.115] (-7655.881) (-7668.648) (-7656.084) * (-7662.622) (-7660.206) (-7659.920) [-7654.054] -- 0:05:17 110000 -- (-7662.756) (-7658.402) (-7657.680) [-7659.075] * (-7659.708) (-7660.236) [-7660.298] (-7657.470) -- 0:05:15 Average standard deviation of split frequencies: 0.000000 110500 -- [-7658.299] (-7659.666) (-7659.726) (-7661.276) * (-7659.336) (-7655.126) [-7657.294] (-7653.978) -- 0:05:21 111000 -- (-7658.499) (-7656.623) [-7656.086] (-7654.820) * (-7655.246) (-7663.315) (-7661.048) [-7653.544] -- 0:05:20 111500 -- (-7664.853) (-7656.286) (-7658.579) [-7657.466] * (-7653.843) (-7661.854) (-7658.065) [-7655.014] -- 0:05:18 112000 -- (-7665.100) (-7660.580) (-7660.637) [-7659.102] * (-7653.753) (-7659.153) [-7666.180] (-7655.049) -- 0:05:17 112500 -- (-7659.015) (-7661.875) (-7665.876) [-7658.515] * (-7663.535) [-7655.363] (-7654.158) (-7656.903) -- 0:05:15 113000 -- (-7659.259) (-7660.663) [-7654.557] (-7663.740) * (-7657.358) [-7655.490] (-7658.611) (-7657.874) -- 0:05:13 113500 -- (-7662.572) [-7660.179] (-7661.216) (-7666.589) * (-7662.100) (-7660.907) [-7658.335] (-7660.763) -- 0:05:20 114000 -- [-7659.805] (-7662.180) (-7655.384) (-7663.522) * (-7659.877) (-7662.691) [-7655.390] (-7657.161) -- 0:05:18 114500 -- (-7661.189) (-7657.322) [-7659.582] (-7657.901) * [-7656.846] (-7659.282) (-7656.265) (-7661.631) -- 0:05:17 115000 -- (-7662.638) (-7656.401) [-7659.004] (-7660.539) * (-7662.306) (-7666.079) [-7654.799] (-7655.368) -- 0:05:15 Average standard deviation of split frequencies: 0.000000 115500 -- (-7658.117) [-7655.327] (-7657.887) (-7661.310) * (-7657.417) (-7662.182) (-7659.963) [-7658.931] -- 0:05:13 116000 -- (-7662.649) [-7657.428] (-7663.505) (-7659.902) * (-7655.2